CSPI07G13750.1 (mRNA) Cucumber (PI 183967) v1

Overview
NameCSPI07G13750.1
TypemRNA
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr7: 12302446 .. 12302751 (-)
Sequence length306
RNA-Seq ExpressionCSPI07G13750.1
SyntenyCSPI07G13750.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGTCAAGTACAAGAACCATCATCTTCTTCCATTGTTTGTCCTAGCTGCCGCAAGTTACCCTTTTCGGTTGACCTTCTCTACGAAGCCCGACCTATTGTCAACTGTTGCTTCTCCTCAGACAAATTCATCGACAACCATCGAACGAGTCGAAGACCATTTCGATTTGTTCCCTACGTCTTCCATCCCCTTAACTAGTCTCAGTCACCAAGCTTCCCCTTTGTGCATTCGCAAGCCAAGCACTTCTCTGCCCGCATCGCTTAGGCCAAGTCTTAGTCATGTGTCCCTCTCCGAGCTGTACTAG

mRNA sequence

ATGTTTGTCAAGTACAAGAACCATCATCTTCTTCCATTGTTTGTCCTAGCTGCCGCAAGTTACCCTTTTCGGTTGACCTTCTCTACGAAGCCCGACCTATTGTCAACTGTTGCTTCTCCTCAGACAAATTCATCGACAACCATCGAACGAGTCGAAGACCATTTCGATTTGTTCCCTACGTCTTCCATCCCCTTAACTAGTCTCAGTCACCAAGCTTCCCCTTTGTGCATTCGCAAGCCAAGCACTTCTCTGCCCGCATCGCTTAGGCCAAGTCTTAGTCATGTGTCCCTCTCCGAGCTGTACTAG

Coding sequence (CDS)

ATGTTTGTCAAGTACAAGAACCATCATCTTCTTCCATTGTTTGTCCTAGCTGCCGCAAGTTACCCTTTTCGGTTGACCTTCTCTACGAAGCCCGACCTATTGTCAACTGTTGCTTCTCCTCAGACAAATTCATCGACAACCATCGAACGAGTCGAAGACCATTTCGATTTGTTCCCTACGTCTTCCATCCCCTTAACTAGTCTCAGTCACCAAGCTTCCCCTTTGTGCATTCGCAAGCCAAGCACTTCTCTGCCCGCATCGCTTAGGCCAAGTCTTAGTCATGTGTCCCTCTCCGAGCTGTACTAG

Protein sequence

MFVKYKNHHLLPLFVLAAASYPFRLTFSTKPDLLSTVASPQTNSSTTIERVEDHFDLFPTSSIPLTSLSHQASPLCIRKPSTSLPASLRPSLSHVSLSELY*
Homology
[Close]
BLAST of CSPI07G13750.1 vs. NCBI nr
Match: KAE8646228.1 (hypothetical protein Csa_016294 [Cucumis sativus])

HSP 1 Score: 97.4 bits (241), Expect = 7.4e-17
Identity = 49/51 (96.08%), Postives = 50/51 (98.04%), Query Frame = 0 

Query: 51  VEDHFDLFPTSSIPLTSLSHQASPLCIRKPSTSLPASLRPSLSHVSLSELY 102
           V+DH DLFPTSSIPLTSLSHQASPLCIRKPSTSLPASLRPSLSHVSLSELY
Sbjct: 121 VKDHSDLFPTSSIPLTSLSHQASPLCIRKPSTSLPASLRPSLSHVSLSELY 171

The following BLAST results are available for this feature:
BLAST of CSPI07G13750.1 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI07G13750.1 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI07G13750.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8646228.17.4e-1796.08hypothetical protein Csa_016294 [Cucumis sativus][more]
BLAST of CSPI07G13750.1 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CSPI07G13750CSPI07G13750gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI07G13750.1.cds1CSPI07G13750.1.cds1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CSPI07G13750.1CSPI07G13750.1-proteinpolypeptide