CSPI07G09030.1 (mRNA) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTCCATGGCCATCATCAATTTTTTAGCTCATATTTTCCTTCTCCTCTCCCTCTTCTTTTCACTCGTTATCAAAGCCGAACACTTCTCCCCATGGCTAAAGGAGAAGCTCAACGATGACGAACTTGATAACGAAGATAATCGATACGGAAAACACAATTGCTCAGGCAAGCAAATTTTCTGCCGGAAATTAGACGAATATGGGTCAAAGGGGAAGAGGAAGAAGATCATGAAATGCTGCAAACACCGATGTGTTGACACTGATTCTGACATAAAAAACTGCGGATATTGTGGCAAAATCTGCCCGTTTCCACAGCAATGCTGCAAAGGTTTTTGTGTAGATACAAACAACAACCGGTTTAACTGTGGGAAGTGTGGGAATAAATGTCCTTTTCGTGTTCGTTGTGTGTACGGTATGTGTGGGTACGATCAGCCGGACCCTTCCCGGCCGCCCAAAGGATGGTGGAAGCCACCGCAATCGCCCAAGGATCGCCACTGCCCGCCACGGGCAAATGAGGGGAGGAGCTCTTTTACTTAAAATGGTAATACATCGTGTCTTGAGGTTTTAAGTCTATAATGTGGTCATGCTTTTTCTTTGTTTGCTGTGTGAATGGATATCTAAGTTATTAACACATGTATAGGGAAAAGTTTTAAATTTCATCATTT CTTTCCATGGCCATCATCAATTTTTTAGCTCATATTTTCCTTCTCCTCTCCCTCTTCTTTTCACTCGTTATCAAAGCCGAACACTTCTCCCCATGGCTAAAGGAGAAGCTCAACGATGACGAACTTGATAACGAAGATAATCGATACGGAAAACACAATTGCTCAGGCAAGCAAATTTTCTGCCGGAAATTAGACGAATATGGGTCAAAGGGGAAGAGGAAGAAGATCATGAAATGCTGCAAACACCGATGTGTTGACACTGATTCTGACATAAAAAACTGCGGATATTGTGGCAAAATCTGCCCGTTTCCACAGCAATGCTGCAAAGGTTTTTGTGTAGATACAAACAACAACCGGTTTAACTGTGGGAAGTGTGGGAATAAATGTCCTTTTCGTGTTCGTTGTGTGTACGGTATGTGTGGGTACGATCAGCCGGACCCTTCCCGGCCGCCCAAAGGATGGTGGAAGCCACCGCAATCGCCCAAGGATCGCCACTGCCCGCCACGGGCAAATGAGGGGAGGAGCTCTTTTACTTAAAATGGTAATACATCGTGTCTTGAGGTTTTAAGTCTATAATGTGGTCATGCTTTTTCTTTGTTTGCTGTGTGAATGGATATCTAAGTTATTAACACATGTATAGGGAAAAGTTTTAAATTTCATCATTT ATGGCCATCATCAATTTTTTAGCTCATATTTTCCTTCTCCTCTCCCTCTTCTTTTCACTCGTTATCAAAGCCGAACACTTCTCCCCATGGCTAAAGGAGAAGCTCAACGATGACGAACTTGATAACGAAGATAATCGATACGGAAAACACAATTGCTCAGGCAAGCAAATTTTCTGCCGGAAATTAGACGAATATGGGTCAAAGGGGAAGAGGAAGAAGATCATGAAATGCTGCAAACACCGATGTGTTGACACTGATTCTGACATAAAAAACTGCGGATATTGTGGCAAAATCTGCCCGTTTCCACAGCAATGCTGCAAAGGTTTTTGTGTAGATACAAACAACAACCGGTTTAACTGTGGGAAGTGTGGGAATAAATGTCCTTTTCGTGTTCGTTGTGTGTACGGTATGTGTGGGTACGATCAGCCGGACCCTTCCCGGCCGCCCAAAGGATGGTGGAAGCCACCGCAATCGCCCAAGGATCGCCACTGCCCGCCACGGGCAAATGAGGGGAGGAGCTCTTTTACTTAA MAIINFLAHIFLLLSLFFSLVIKAEHFSPWLKEKLNDDELDNEDNRYGKHNCSGKQIFCRKLDEYGSKGKRKKIMKCCKHRCVDTDSDIKNCGYCGKICPFPQQCCKGFCVDTNNNRFNCGKCGNKCPFRVRCVYGMCGYDQPDPSRPPKGWWKPPQSPKDRHCPPRANEGRSSFT* Homology
BLAST of CSPI07G09030.1 vs. ExPASy Swiss-Prot
Match: Q9C6P6 (Stigma-specific STIG1-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=KRS PE=2 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.3e-16 Identity = 43/101 (42.57%), Postives = 57/101 (56.44%), Query Frame = 0
BLAST of CSPI07G09030.1 vs. ExPASy Swiss-Prot
Match: Q9LNN7 (Protein GRIM REAPER OS=Arabidopsis thaliana OX=3702 GN=GRI PE=1 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 8.1e-14 Identity = 33/71 (46.48%), Postives = 39/71 (54.93%), Query Frame = 0
BLAST of CSPI07G09030.1 vs. ExPASy Swiss-Prot
Match: Q40579 (Protein STIG1 OS=Nicotiana tabacum OX=4097 GN=STIG1 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.9e-11 Identity = 35/93 (37.63%), Postives = 44/93 (47.31%), Query Frame = 0
BLAST of CSPI07G09030.1 vs. ExPASy Swiss-Prot
Match: Q6EEH1 (Protein STIG1 OS=Solanum lycopersicum OX=4081 GN=STIG1 PE=1 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 4.1e-10 Identity = 33/95 (34.74%), Postives = 46/95 (48.42%), Query Frame = 0
BLAST of CSPI07G09030.1 vs. ExPASy TrEMBL
Match: A0A0A0K719 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G180130 PE=3 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 1.1e-103 Identity = 175/176 (99.43%), Postives = 175/176 (99.43%), Query Frame = 0
BLAST of CSPI07G09030.1 vs. ExPASy TrEMBL
Match: A0A5D3DHL9 (Stigma-specific STIG1-like protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00460 PE=3 SV=1) HSP 1 Score: 338.2 bits (866), Expect = 2.1e-89 Identity = 154/176 (87.50%), Postives = 162/176 (92.05%), Query Frame = 0
BLAST of CSPI07G09030.1 vs. ExPASy TrEMBL
Match: A0A5A7U868 (Stigma-specific STIG1-like protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G001510 PE=3 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 2.8e-54 Identity = 91/101 (90.10%), Postives = 93/101 (92.08%), Query Frame = 0
BLAST of CSPI07G09030.1 vs. ExPASy TrEMBL
Match: A0A6J1CCX1 (stigma-specific STIG1-like protein 1 OS=Momordica charantia OX=3673 GN=LOC111010504 PE=3 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 2.3e-40 Identity = 88/175 (50.29%), Postives = 117/175 (66.86%), Query Frame = 0
BLAST of CSPI07G09030.1 vs. ExPASy TrEMBL
Match: A0A6A1VSY5 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR4G001400 PE=3 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 6.4e-30 Identity = 73/154 (47.40%), Postives = 90/154 (58.44%), Query Frame = 0
BLAST of CSPI07G09030.1 vs. NCBI nr
Match: TYK23073.1 (stigma-specific STIG1-like protein 4 [Cucumis melo var. makuwa]) HSP 1 Score: 338.2 bits (866), Expect = 4.3e-89 Identity = 154/176 (87.50%), Postives = 162/176 (92.05%), Query Frame = 0
BLAST of CSPI07G09030.1 vs. NCBI nr
Match: XP_038900147.1 (stigma-specific STIG1-like protein 1 [Benincasa hispida]) HSP 1 Score: 280.4 bits (716), Expect = 1.1e-71 Identity = 134/178 (75.28%), Postives = 148/178 (83.15%), Query Frame = 0
BLAST of CSPI07G09030.1 vs. NCBI nr
Match: KAE8646024.1 (hypothetical protein Csa_016874 [Cucumis sativus]) HSP 1 Score: 228.8 bits (582), Expect = 3.7e-56 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of CSPI07G09030.1 vs. NCBI nr
Match: KAA0049791.1 (stigma-specific STIG1-like protein 4 [Cucumis melo var. makuwa]) HSP 1 Score: 221.5 bits (563), Expect = 5.9e-54 Identity = 91/101 (90.10%), Postives = 93/101 (92.08%), Query Frame = 0
BLAST of CSPI07G09030.1 vs. NCBI nr
Match: XP_022139655.1 (stigma-specific STIG1-like protein 1 [Momordica charantia]) HSP 1 Score: 175.3 bits (443), Expect = 4.8e-40 Identity = 88/175 (50.29%), Postives = 117/175 (66.86%), Query Frame = 0
BLAST of CSPI07G09030.1 vs. TAIR 10
Match: AT1G50650.1 (Stigma-specific Stig1 family protein ) HSP 1 Score: 87.8 bits (216), Expect = 9.4e-18 Identity = 43/101 (42.57%), Postives = 57/101 (56.44%), Query Frame = 0
BLAST of CSPI07G09030.1 vs. TAIR 10
Match: AT1G53130.1 (Stigma-specific Stig1 family protein ) HSP 1 Score: 78.6 bits (192), Expect = 5.7e-15 Identity = 33/71 (46.48%), Postives = 39/71 (54.93%), Query Frame = 0
BLAST of CSPI07G09030.1 vs. TAIR 10
Match: AT1G11925.1 (Stigma-specific Stig1 family protein ) HSP 1 Score: 75.5 bits (184), Expect = 4.8e-14 Identity = 32/75 (42.67%), Postives = 43/75 (57.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
|