CSPI07G07820.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI07G07820.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	exosome complex exonuclease RRP44 homolog A
Location	Chr7: 5586281 .. 5596841 (-)
Sequence length	3447
RNA-Seq Expression	CSPI07G07820.1
Synteny	CSPI07G07820.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTCCCTTCTTCCCTACTCCCTCTCTCCGTCTCTCTAAAACAGAAAAGGGAAAAGCTTAAACCCATTAATTTTCCATCGCTTCGTACGATACCAGGGACGCATCGCTCACCATCTCCGACAGGGGTCCGCCGCTCTTCGCCTGCTCTTCAGTTCAACAATCATTATCGATCATCTCCGTTAGGGAGCCGCAATCACTATTCTCCCTGGTTTACGGCTGCCTGAATAGCCGCAATCTCACCAGCTTCAGCAGATACGCAACCGTGAACAATAATAGTTGAAGCTTCCCTCAGAAGACATGTTGCATAACAAGTCGTTTGTTAAAAAGACGAAGTCTGGGAAGGTGATGAAGGTCAGTAAATTACTAATCTTTGGTCCTTATTTTATACATCTCATGAGTTTCCATCCTTTTATTGTTAATTTGTTCTTTTGGGTCTCTGTTCTTCATGCCAGCAAGTGAGAGAACACTATCTTCGAGATGATATATATTGTGGGGCTTCGATTTGCAAAAAATGTGATTCTTCAGTTGCTCGCTTGGGTGCTTCTACATCGCCAATTCTAGTTCTCGACACCAATGTTGTTCTTACTCAGGTTACTTTCGTGTGGTTTCTGTTGTCAACATTGAGCTTTCAACTTTTAGTGTTTTATGAAATGATGCGTTTTTACAGATTGATTTGCTTGAGAATCCTGCTATTGATGACGTGGTTATGCTATCAGTTGTTCTGGACGAGGTTAAGAACAAGAACCTCTCTGTTTACAACAGAGTTAGAGCTCTCTGCAGCAATCCCCTGCGGAGATTCTTTGTTTTCTCTAACGAGCACCACAAGTGTGTTTTCTATTTACACTTAATTAAATAATATTGTACCATTTAATTAACAACAGGATAAATTTACACTTGGCTTGGGGATTCAAAATCTTTCACCTTTTATTGTATTTCTGAACTGCATGGGAATTGGGTTGTTGCTATTTCCTTCTAACTCATTTGCTAATACCAACTTCTAATTAGAAACTGTGCCAATCAAGAGTTGATTGGGTACCTTTGGTTTTACTTCTACGTACATCAGGCTAGTGGTTTTATACATCTTATGTAAAAACTGAGAGAAAAAACTAAATACGACTTATAAGAGCTTTACTAGGGCTTAGCTAGTCATTGTAATTGTTGAATGAAGTGTGATGTCTAGGTTTTTCACAGTAAATGAACCTACAACTCTAATGTGGTGTGTTTCCCTATAAATCTTTTTCTAACCTCCCATGGCATAAACTATCAAAATCTGTAAGGAAAAACTTTAACTTTCATGGTGGCTAGAATTTTGAGCTTCCTTTGATGATATTGTTTTGGCAGGGATACATATATTAAGGACATGAGTGGAGAAAGTAAAAATGATCGAAATGATAGAGGTATTCTCTTGATATTGCATAAGTTGATGCTGTAATGTTGTACTGAAACTGAACTGCATATAGTTTCTTTCATCCATCCTCTCTATCCCACTTGAACAGTATTTATAGCTTACACTTTTTCATGCTAACATTCTAGTTCATCATTTACAGTAACTGCCAAAATATTCTGTATGTTTTGTTTTCATAACCCTTTCATAACTCATAAGCTAATGACTGGGATAGATCACAAATGCCTGCTTAAATTGTGTTGATGGTTATCTCTAACATTGTGATTCAGCCATTCGAGTTGCTGCTCAATGGTATCAGAATCATCTTGGTGGTGCTACACGTGTTCTACTCATAACCAATGACAGAGAGAATAGGAGAAAGGCTATTGAAGAGGGAATTGGTGCAGAGACAAGTATGTTAGATGTTTATTTATTTTTAGCTTCGCTTAAAGCCTTCTGGTGTCTACCATATGGCTTGCTTGTAATGATTATGCTCTCTCTCTCTCTCTCTCAATTTTTTTTTTGTCATATGCTTAGCTAACTTGGTTAATTTGTTTGGTCTTTACAGTTGAATCATATGTTAAATCATTGGGGCAAACTCATTTACTTGATCTGTTAGTGCAAAGTGCAAATGAAGATGCAAATATGGAGGATGTTGAAGATTTGAGGCCATCGAAGAGAAAGGTTCTTTACTCCGAGGTATTACAATGAATGTGCTGAACTTCATTTATTTCAGGAAAAATACTAGTGTCTTATAAGGTTTCTGGTTTTTAACATATCCTGCTCTTCTTTCTTTCAGCATAAACCCATGTCAGAAATTACTTCTGGTTTGCATCGTGGTATATATCATCAAGGAAAGCTCCGTGTTAATCGATACAACCCATTTGAAGCATATGTTGGAAGTGAGAGTATTGGTGATGAAATTATTATTTATGGGCGTACCAACATGAACAGGGCTTTTGATGGTGATGTTGTGGCAGTTGAACTTCTGTCTCGAGATCAGTGGCATGAAGAGAAATCTCTGACTATAGCAGACGATGGTAATTTTTTTATTCTCACGAATATTTTACTAATTGTGAACTGAGAAGGCTAGTGGGAATTCTGTAACGATCTAACATGGAGATGTGCGTATGTGTGGGTGTTTGTGTAGGGTGAATGGGGATAGGATTAGGTTGGAGTCATATTCTCACGACTTATAAGAATTCCAATTATATGATAACTTAAATATGAAATTATAGAAAGATTAGCAAATTCCCTTAGGGAAATGACTAAGGACTTTCCTATGTGTTTCCAATAAAAGTTTCTATTCAGTATGGTTGGTGGCCTGGCCGGTGGGAGGGGGCAATTAGATGCCAACTCAATGTAGATGGTAAAAAGGTTAACAACGTCCCTGTCAGGAAGTTACTAATTATCTTTTCTCTGTATTTCCAATTCAAGCTTATATTGGGCTTTGAACATCATTCTCTCTCTCTTTCTCACACATACACGGGCAGTTGTGCACACACACACAATCCCATTATGATGCAGACATGATTTTATTATTGCAGAAGATGATGAGGAAGAAGATGTTCATCTTGTTCCTGGTAGTGCTGATGATGCTCCAAGAGCTGCATCTGTACTACAGGGCTCTAGTGGAGATTCTTCTTCTAGTTCACCACGCCCAGCTGGACGTGTTATTGGTATCATAAAGCGTAACTGGCATTCGTAAGTTATCATGGCTGTTTGTTAGATTCCTATGTTCCATGGGGTGTCTTTTGCTGTACACATTATATACTTTTTCTTCTACTAATAAATACTTAAATATGTTTTTAGATGTATATGTACCCGTGTATATTTTTATATGTCTACAGTCTACAAGATCAAGATGACACTAACATTTGTAGTTAATGTTGAAAATGTACTCTGATTTTCCACCTAACTTTATCGTTGTTTTGGGGATTTCATAAATTTTTTGTTTTCAGTATTGCAGTTTTGTTTCTTTACTTTTTCAAGATGGTTGCACAGATTTTGTATCATAGTGGAGTTCTTTGTCTGAAGTTGTTGAAATTAATGCAGTTATTGTGGTTCTTTGGATCCAATGCCTATGCCTGCTGGAAGTGGTGGCATCGCTTATGCTCTATTTGTTTCCAAAGATCGTCGGATTCCTAAAATTAGAATCCAGACTCGTCAGCTTGAGAATCTTTTAGACAAGAGAATTATTGTAGCAGTTGATTCTTGGGACCGTCTTTCTAGATATCCTTCAGGACATTATGTGCGATCTATAGGAGAAATAGGTGATCGAGATACAGAAAGTGAGGTATGCACGATCATTATATCATTAAGAAGCACTTTTCTGTTCTATCTCTTAATATGCTTTCAAACCACATGGTTCTTTAGATGATTTTCCATAATACCTACAGGGCTAATAGATCTTGTTGGATTTCTAAAACTTATGGGGGTGGGATTTAGGTTTCAGATTGTTAAATATATCCATATACTAATAACATATAATATTTTTTAGGGTGATATGGTAAAAATATTATTATCATTATTTTTTTTGGGGGGGGATTTTGACATTGAACCTATGAGGTCATATCAGTTTTGGCCCTAAACTTTAAATTTCATCAAATTGGATCCTAAAACAAGTGTTACAATTTTACCATCGATCAATTTCTGCTAAGTTGCCCACTAATTTTAGTAGATAATAGTGTAAAAATCCTTGAAAACTCCTTAATTTCAATGAAATAAAGTTTTGTACAAATATAAGTTTGACCAATGCACAAATAAACCATGGAGTAGCTTTGCCAAAATTCATATACTTGAACTAAAAAACTATAGCTCTTTTGGGTTTTTTTTTTTATTTCATATTGTACATGCGTTTAAAAGTTCATTGAATGCATAAGAGAAAATTTCTTATGACGATATTTGGAGTGAGCAATTTTAGAGGGTTAAAATTGCAAACACATTTTCTCTCTCTTAAAATGTTTATTTTATAATATTAAGTTTAAGGTTAAGATTTCATTGCTTATCTGAGTTTGATGTGCAATTAACACAACTTGTCAAAGTTGATTTTTCCCTAAAAATTTGATTCACAAAATGTTTAAATTACTGATGAGATGATAAATATGATTGAATGTTATCTCTGTACAATACTGATGTCTAGGAATACATCAGCAAGTGAGAATTAAATGAGCTGTACACACTTTTAGGTACTAGTTAATCCGAAATACGTGGGGGTGAGGAGGTGGAAAATCTTTCAGTGCCTTTTCTCATTAACTGAAATTTTTGGACCCTTTTGAATACTTCAGGTGGTCTTAATTGAAAACGATATAAACTCCAGGCCATTTTCTTCACAAGTTATGGCATGCTTGCCTCCGTTACCATGGTCAGTGTCTCCTGTTGATATTGCAAACCCTATTCGACAGGATTTGCGGCATTTAAATGTTTTCAGTGTGGACCCTCCAGGTAGTTGAATGTTTCTTGAACTCTATCACGCCTTTTTTTTACCTGTTATTATTCCTTTGTGGTGTTGTCAGTTAGTTCTGTCAAACATTAATTGGAGTTCATGGGCTTTTTATTTGTCCAGGTTGCAAAGATATTGATGATGCACTTCACTGTACTGCTCTTTCAAATGGAAATTTTGAAGTTGGAGTCCGTATCCTCAGTCTTTTAACTTTCTGTTTACCGAAGAGGTTTTTGTTACTGAAGAGTCTTAACGATGGGTTTCTAAAGCACTCTTACGGTTCTAAAAGATTTTAAATGATTAAACCATTATGATTTGACCTAGTGGTAAAAAGGGAGACATGATCTCAATAACTAACTAAGAGGTCACGAGTTGAATCCATGGTGGCCACCTATTTAGGAATTAATTTCTTACGAGTTTCCTTGACACCCAAATATTTTGGGGTCAAGCGGGTGTTCTATGAAATTAGTCGAGTTGCGCACAAGCTGGCTTAGACACTCATGGATATAAAAAAAGATTTTAAATGATTAACTTAATCTTTTGGATCTTGTTATTTATTCATCCCTTTTATAGAGAATATTTAAATATTTTTATTGGAATTCTTTAAAATAGATTACTCTCGGTAGTTAGTTGTACCAGGATTGGGATCTCATTTTTAAAAAATTCTTATCGGGATTACTGTTCAAATCATTTGGTGTGTCATTCTAAATAAGTTTGAAAAAAGTAGATTCATTTTTACAAGGGTGGATTGAGTTGGATTCCTTTCGTGGGACTAGAATTTTTTGTTCACTCTTGTATATTAATTTATTTTGTGTAATGAAAGCTTGGTTCGTATTTGCATCTTTAACAACATTCGATTAGATATTGCTGATGTAACAAATTTTGTTCATCCGGGCACTGCATTGGATGACGAGGCTGCACAAAGGGGCACATCAGTCTACCTTGTTGAGCGGAGAATAGATATGCTTCCGAAACCATTAACAGAAGGTCGGCATTTACTTTTATGTTGCATTTGTGTAAGAGGCATTGTTTGACAGGTTTTATTCTTATCCACTTTAGCTCTATGTGATGAAAAATCTTAATCTGCAGATATATGTTCTCTTCGAGCTGATGTGGAAAGACTGGCATTTTCAGTAATTTGGGTATGTAGTTTATCGCTTTTTTTTTTGGAAATATGGATAAAAGTTTTATTCTGCAGTAACATCTTCATACTTTTGTTTTTCTTGATATTAAATTTCTGCCAATCCTACCCTAGGCCTTTATCATATTGTACACTCTTTTATATGATATCATCGACTTTTGTCATCTTTTACTTCGATTATTTGTTTATCTGTTGTTTAATAATCAATTAGTGAACATGTTGACTTCAGTATGCCCCCCTCCCCCCTAGTTCGTGAATTTTAGTTTCAATCACTTGCTCGTGATGTTTAGGAAATGACACCTGAAGCCGATATTGTTTCTACTAGCTACACCAAAAGCATCATTAAGTCAAGTGCTGCATTATCTTATGTTGAAGCTCAGGCAAGGATGGATGACAGGTAATTTCATGTCAGTTATAACTATCTGAAGTTTATTGGAGTTTGTAATAATTCGATCATTTACGGTAATTGCCAGCATTTTGACATGGTGTAGTGTTGTGTTCATGTCTTTCATCAAACCTTCACTGTCTGTTAGTTGTTTATTAGGATACATCCTAACAAGAATCAAGATCTAAATTATATTGAGAATCAAAGAAGAAACTACAATAGAATCACTCCACAGAATAGTTTCCCTTCACTTACTCATCTTCTCGCTATTTATAGAACATCCAGTAACTAGCTTTCCATCTAATGACCAATTGACCATTATATCCCTGAATACTAACATTCCTATCCAGGTACCTAACGTTGTTTTATGTATTATTGATGCCATCTCAACTAGGTTGAAAATAAAACCCTTATACTAGGCTCCAATTTTCAATACAAGATGTGACTAGATAAAATCCTAATTATTACTATTTTTAAACAATAAAAAAGCCCCAAGACACCAAAGGTGACCGCTTGAGGCACGCCTTACCTTTTCAATGCAAGACACCAAACCTGCACTTTGAGCCTTGACCCACTCCCAGGCTTTTTAAAACACTGTCATGAGCTCATGGCTTTTGAAAGAACAAAATTTTCAACTGTTTCGAAAGTAGTTTCTGAACTATGTTCAAGTTTACCAAATAGAAAAGAATCCCATGATCCCGAACAGATCTGTTATTTATTTCTTATCCTTAAAATAGACAGTACGACCAAAATAGCTTTGGATTAGCGCCTTAACTTCTTATTTGAAATTTGTGTGTTGCTTTCTTGATCCTTGGAACTTGGAAGGGTTTCACTTTATGAGTCCTTAATTGAGTGCAGGTTTGCCTATATTTTTTTGTGTTCCTTGCTGAAGCTCTTCCTTTGGCATCTCCCTCTCTCTCTATATCATACGTTGTGGTGCTTATACTCATAGAATCTTTGAGTTGCAACCTTTGTAAATAATCTACAACCTTTTTTTTGTTTGCATATTTGGCAAATCGAGCTTAAATATGCAATTACCAATAAATTGTTTTATCACTGTGCTTTACTTATTTTCAGAATTTTTGGGGGGTTCATTAAAACCTAAACGTTTTATTTTGACCAAGCTGTATTTACTTGCAGTCGATTGATGGATCCAATAACTAGAGACTTGAGAAATATGAATGCTTTAGCAAAGGTATGCATGCTTTGTGTACTTTTGTTCTATAAATAATCTGATTGATATGTGATGTAAGAAGATTAAAGGTTAATTGGGTAATATTCTAGGTTAATTCCCTTTTTACCCTCAATTGTAATAGAACTCTATAAATAGGAGTCTTCTCCTCTTGTATGAAACACATTATTCATTCTAATAAAAAATCCATAATCTTGGTTCTTGGAGGGTTTCTCCTTGAGTTACTTAGATTACATCAATATGCCTCAGTCTGACTTAGTTTTTAACATCCCACAACTTTGTGTACCCGCAGAAAATGAGGTTGAGACGAATTGAGAGAGGAGCTTTGACTCTTGCTTCTGCTGAAGTCAAATTTCAAATTGACACTGAGACGCATGATCCTCTTGATATTGGTATGTTTGGATGTCAGATTTCGTTCGAGGATTATTTGTTGAATCCTCAGACACAAATATTTTGTTTCAAACAGTCAAATTAATAATATGAAAAAGATGTTCTTGTCATCCATTTTCTATATATCTAAATTCACTTTTCGTTCCCTTATTAGTTGTGTATTAATGTGCTAAGATTTCCCCTTTTTCTTTCTTTAAAACTTCTCAAATCTTTTGTTCCAGGTATGTATCAAATTCGAGAAGCTAACCAAATGGTTGAGGAGTTTATGCTTGCAGCAAATGTTTCGGTAGCAGAAAAGATTCTTAAACATTTCCCGCTGTGTTCATTATTAAGGTCAAGAGCTATCACATAAGCTTTTTCTTCTCATCTTTTATTGTATGAGTGCACTCGCCTTTCATTCAATCGTTAGCCACAAAATTAGATGAAAGAAGAAAAATTGCATCTTTTTGAGAGAAACAAGAAATTAGTCATATTAGGATATAGACTCGTTTTTATAGTTTTCAAATTAAAAGCAAGCCTAATCTGACTTGCCCATTTGTCCAACACCAGTCGAAGGGTTGAGGATTTCATATTCTTGGTTGAAGTTTAACTGCTCTCCTGCCATTTTTCTCAGCTGGAGTTTCGATCTATATCCTAATATGACTTATTTCTTGTTTCTCTCTCAAAAGATGCAAATTTTCTTCTTTGATCTAATTTTATGGCTAATGATTGATTGATAAGATTGTTATAATAAACTATTGCTTCCTGGCCTTTCTTTTTATTTGCAGGCGCCATCCTACTCCTACTAAAGAGATGCTCGAACCTTTGATCCGCACAGCTGTAGCTGTTGGTCTTGATTTGGATGTCTCATCATCCAAAGCTTTGGCTGATTCTCTTGATCGTGCATTGGTATATTATTGCATCTGAGTAGGACAATTTTAGATTTTTCTTCAAATGTTGCTTGGCTCGTGGCTATGCTGAATTTAATTCAAAATCCATATTGTGATAAACATTTTCTCTTCTGTTGTTTGTTTAACTTGAACAAATTCATATATTATCAGGGTGATGATCCATACTTCAATAAGCTGATCAGAATACTAGCTACTAGATGTATGACACAGGTAATTTCACTTAAATATGAATTTTTTTCTAATTTAATTGCTGATGGACATTTCTGAAATCCTTTTTTTGTACAAGTGAAGGCAGTTTACTTCTATAGTGGAGACCTCAGTCCTCCAGAATATCAACATTATGGGCTTGCAGCTCGTCTGTATACCCATTTCACCTCTCCTATTCGACGATACGCAGGTTTGGGGTCCTTGTGTTGTCAGTTTAGTGACGTTGTCCTATTATTTTGTGTCCTTAGCCATTATTTTATTGCAGATGTCATTGTGCACAGATTGCTTGCTGCATCTTTAGGAATATTCAAACTCCCAACATTATTCCTTGACAGACCGAAACTCACTACAATCGCAGATAGTATGAAATACTCTCTGCACCTCAGTTATTTGTTACGATGATAAGCACTCCTAATCTATTAAAGAAATATCATATATATATATATGCTGACTCTTGTAAATTGTTTTAGACTTAAATTATCGACACAGAAATGCCCAAATGGCTGGCCGGGCTTCAGTGGAGCTTCATACTCTAATTTACTTCAAAAAACGGTATTTGATCTTTAGCTTGTTCGTCACTCTTGTGCATGACTAAAATATTTTGACGTTCACTTTTTTCTTGTCTAATCCAACGAAGACATTTCATCTCTTTTTGATGTGTGTCCGTAATTTCATCTCTTTCTGATGTGTAGGCCTACGGACACGGAGGCCAGAATAGTGAAGATAAGATCAAATGGTTTTATTGTATTTGTTCCTAAGTATGTTCCCCAAACCTATGGTTTTATATTAGCATATCTTTAACTCTATCTTTTACTTAGATTGATCTGAAATGTTTGAGATGAACTCAAATAACTGAATAAGGGTGACTATGCACATAAGATGATATTAAATGTTGTACGAGTTTTCCAACATCAAATGTTATTATGTTGGACTGTTGACGTAGAATTATAGGGAGCCGGTGATATGGTTGATAAAGTTGATCTAGACTTCCTCAGATATAAAATTAAAATGGTGTTCAGTAATGATGGAACAACATGTTTGCTTTGTTTGTGAACCACTCGATGATGAACACTGTTTTCATTCTTTCCCCTTTGTCAGATTTGGTATCGAAGGACCGGTTTACTTGACAGGTAAAAGCGAGAAGCACAGTGGAGAATGGTTTGTGGATGAACAAGAACAAAAGATCAAGAAGTTAGATGGAAGCATCACATACAACATTCTACAAGCGGTGAGAATTCACATGGAGGTTGTGGAGCCCCAACCAAATAGACCAAAGCTCCAGCTTACTCTTCTTTAAGCTTATTTTTCTTTTTTTTTTGGCTTTGCCTCTAGGAAACACAAACACTTTTGTAAGAGTAAAAGGTAGGAAAATAGAATCCTTTTTAGAAAGTTGGGAATAGTGTAGCAAAATTTCACTCATGTTAGAAGTTTGGAACAATGTAAATTTTCCTTTATTCAAATATTTATCACACATTTCTTCAAGTTTAAACTTATTATTTATTTCTTTTAGTTGTATTTTATATTGAAAT

mRNA sequence

CTTTTCCCTTCTTCCCTACTCCCTCTCTCCGTCTCTCTAAAACAGAAAAGGGAAAAGCTTAAACCCATTAATTTTCCATCGCTTCGTACGATACCAGGGACGCATCGCTCACCATCTCCGACAGGGGTCCGCCGCTCTTCGCCTGCTCTTCAGTTCAACAATCATTATCGATCATCTCCGTTAGGGAGCCGCAATCACTATTCTCCCTGGTTTACGGCTGCCTGAATAGCCGCAATCTCACCAGCTTCAGCAGATACGCAACCGTGAACAATAATAGTTGAAGCTTCCCTCAGAAGACATGTTGCATAACAAGTCGTTTGTTAAAAAGACGAAGTCTGGGAAGGTGATGAAGCAAGTGAGAGAACACTATCTTCGAGATGATATATATTGTGGGGCTTCGATTTGCAAAAAATGTGATTCTTCAGTTGCTCGCTTGGGTGCTTCTACATCGCCAATTCTAGTTCTCGACACCAATGTTGTTCTTACTCAGATTGATTTGCTTGAGAATCCTGCTATTGATGACGTGGTTATGCTATCAGTTGTTCTGGACGAGGTTAAGAACAAGAACCTCTCTGTTTACAACAGAGTTAGAGCTCTCTGCAGCAATCCCCTGCGGAGATTCTTTGTTTTCTCTAACGAGCACCACAAGGATACATATATTAAGGACATGAGTGGAGAAAGTAAAAATGATCGAAATGATAGAGCCATTCGAGTTGCTGCTCAATGGTATCAGAATCATCTTGGTGGTGCTACACGTGTTCTACTCATAACCAATGACAGAGAGAATAGGAGAAAGGCTATTGAAGAGGGAATTGGTGCAGAGACAATTGAATCATATGTTAAATCATTGGGGCAAACTCATTTACTTGATCTGTTAGTGCAAAGTGCAAATGAAGATGCAAATATGGAGGATGTTGAAGATTTGAGGCCATCGAAGAGAAAGGTTCTTTACTCCGAGCATAAACCCATGTCAGAAATTACTTCTGGTTTGCATCGTGGTATATATCATCAAGGAAAGCTCCGTGTTAATCGATACAACCCATTTGAAGCATATGTTGGAAGTGAGAGTATTGGTGATGAAATTATTATTTATGGGCGTACCAACATGAACAGGGCTTTTGATGGTGATGTTGTGGCAGTTGAACTTCTGTCTCGAGATCAGTGGCATGAAGAGAAATCTCTGACTATAGCAGACGATGAAGATGATGAGGAAGAAGATGTTCATCTTGTTCCTGGTAGTGCTGATGATGCTCCAAGAGCTGCATCTGTACTACAGGGCTCTAGTGGAGATTCTTCTTCTAGTTCACCACGCCCAGCTGGACGTGTTATTGGTATCATAAAGCGTAACTGGCATTCTTATTGTGGTTCTTTGGATCCAATGCCTATGCCTGCTGGAAGTGGTGGCATCGCTTATGCTCTATTTGTTTCCAAAGATCGTCGGATTCCTAAAATTAGAATCCAGACTCGTCAGCTTGAGAATCTTTTAGACAAGAGAATTATTGTAGCAGTTGATTCTTGGGACCGTCTTTCTAGATATCCTTCAGGACATTATGTGCGATCTATAGGAGAAATAGGTGATCGAGATACAGAAAGTGAGGTGGTCTTAATTGAAAACGATATAAACTCCAGGCCATTTTCTTCACAAGTTATGGCATGCTTGCCTCCGTTACCATGGTCAGTGTCTCCTGTTGATATTGCAAACCCTATTCGACAGGATTTGCGGCATTTAAATGTTTTCAGTGTGGACCCTCCAGGTTGCAAAGATATTGATGATGCACTTCACTGTACTGCTCTTTCAAATGGAAATTTTGAAGTTGGAGTCCATATTGCTGATGTAACAAATTTTGTTCATCCGGGCACTGCATTGGATGACGAGGCTGCACAAAGGGGCACATCAGTCTACCTTGTTGAGCGGAGAATAGATATGCTTCCGAAACCATTAACAGAAGATATATGTTCTCTTCGAGCTGATGTGGAAAGACTGGCATTTTCAGTAATTTGGGAAATGACACCTGAAGCCGATATTGTTTCTACTAGCTACACCAAAAGCATCATTAAGTCAAGTGCTGCATTATCTTATGTTGAAGCTCAGGCAAGGATGGATGACAGTCGATTGATGGATCCAATAACTAGAGACTTGAGAAATATGAATGCTTTAGCAAAGAAAATGAGGTTGAGACGAATTGAGAGAGGAGCTTTGACTCTTGCTTCTGCTGAAGTCAAATTTCAAATTGACACTGAGACGCATGATCCTCTTGATATTGGTATGTATCAAATTCGAGAAGCTAACCAAATGGTTGAGGAGTTTATGCTTGCAGCAAATGTTTCGGTAGCAGAAAAGATTCTTAAACATTTCCCGCTGTGTTCATTATTAAGGCGCCATCCTACTCCTACTAAAGAGATGCTCGAACCTTTGATCCGCACAGCTGTAGCTGTTGGTCTTGATTTGGATGTCTCATCATCCAAAGCTTTGGCTGATTCTCTTGATCGTGCATTGGGTGATGATCCATACTTCAATAAGCTGATCAGAATACTAGCTACTAGATGTATGACACAGGCAGTTTACTTCTATAGTGGAGACCTCAGTCCTCCAGAATATCAACATTATGGGCTTGCAGCTCGTCTGTATACCCATTTCACCTCTCCTATTCGACGATACGCAGATGTCATTGTGCACAGATTGCTTGCTGCATCTTTAGGAATATTCAAACTCCCAACATTATTCCTTGACAGACCGAAACTCACTACAATCGCAGATAGTATGAAATACTCTCTGCACCTCAGTTATTTGTTACGATGATAAGCACTCCTAATCTATTAAAGAAATATCATATATATATATATGCTGACTCTTGTAAATTGTTTTAGACTTAAATTATCGACACAGAAATGCCCAAATGGCTGGCCGGGCTTCAGTGGAGCTTCATACTCTAATTTACTTCAAAAAACGGCCTACGGACACGGAGGCCAGAATAGTGAAGATAAGATCAAATGGTTTTATTGTATTTGTTCCTAAATTTGGTATCGAAGGACCGGTTTACTTGACAGGTAAAAGCGAGAAGCACAGTGGAGAATGGTTTGTGGATGAACAAGAACAAAAGATCAAGAAGTTAGATGGAAGCATCACATACAACATTCTACAAGCGGTGAGAATTCACATGGAGGTTGTGGAGCCCCAACCAAATAGACCAAAGCTCCAGCTTACTCTTCTTTAAGCTTATTTTTCTTTTTTTTTTGGCTTTGCCTCTAGGAAACACAAACACTTTTGTAAGAGTAAAAGGTAGGAAAATAGAATCCTTTTTAGAAAGTTGGGAATAGTGTAGCAAAATTTCACTCATGTTAGAAGTTTGGAACAATGTAAATTTTCCTTTATTCAAATATTTATCACACATTTCTTCAAGTTTAAACTTATTATTTATTTCTTTTAGTTGTATTTTATATTGAAAT

Coding sequence (CDS)

ATGTTGCATAACAAGTCGTTTGTTAAAAAGACGAAGTCTGGGAAGGTGATGAAGCAAGTGAGAGAACACTATCTTCGAGATGATATATATTGTGGGGCTTCGATTTGCAAAAAATGTGATTCTTCAGTTGCTCGCTTGGGTGCTTCTACATCGCCAATTCTAGTTCTCGACACCAATGTTGTTCTTACTCAGATTGATTTGCTTGAGAATCCTGCTATTGATGACGTGGTTATGCTATCAGTTGTTCTGGACGAGGTTAAGAACAAGAACCTCTCTGTTTACAACAGAGTTAGAGCTCTCTGCAGCAATCCCCTGCGGAGATTCTTTGTTTTCTCTAACGAGCACCACAAGGATACATATATTAAGGACATGAGTGGAGAAAGTAAAAATGATCGAAATGATAGAGCCATTCGAGTTGCTGCTCAATGGTATCAGAATCATCTTGGTGGTGCTACACGTGTTCTACTCATAACCAATGACAGAGAGAATAGGAGAAAGGCTATTGAAGAGGGAATTGGTGCAGAGACAATTGAATCATATGTTAAATCATTGGGGCAAACTCATTTACTTGATCTGTTAGTGCAAAGTGCAAATGAAGATGCAAATATGGAGGATGTTGAAGATTTGAGGCCATCGAAGAGAAAGGTTCTTTACTCCGAGCATAAACCCATGTCAGAAATTACTTCTGGTTTGCATCGTGGTATATATCATCAAGGAAAGCTCCGTGTTAATCGATACAACCCATTTGAAGCATATGTTGGAAGTGAGAGTATTGGTGATGAAATTATTATTTATGGGCGTACCAACATGAACAGGGCTTTTGATGGTGATGTTGTGGCAGTTGAACTTCTGTCTCGAGATCAGTGGCATGAAGAGAAATCTCTGACTATAGCAGACGATGAAGATGATGAGGAAGAAGATGTTCATCTTGTTCCTGGTAGTGCTGATGATGCTCCAAGAGCTGCATCTGTACTACAGGGCTCTAGTGGAGATTCTTCTTCTAGTTCACCACGCCCAGCTGGACGTGTTATTGGTATCATAAAGCGTAACTGGCATTCTTATTGTGGTTCTTTGGATCCAATGCCTATGCCTGCTGGAAGTGGTGGCATCGCTTATGCTCTATTTGTTTCCAAAGATCGTCGGATTCCTAAAATTAGAATCCAGACTCGTCAGCTTGAGAATCTTTTAGACAAGAGAATTATTGTAGCAGTTGATTCTTGGGACCGTCTTTCTAGATATCCTTCAGGACATTATGTGCGATCTATAGGAGAAATAGGTGATCGAGATACAGAAAGTGAGGTGGTCTTAATTGAAAACGATATAAACTCCAGGCCATTTTCTTCACAAGTTATGGCATGCTTGCCTCCGTTACCATGGTCAGTGTCTCCTGTTGATATTGCAAACCCTATTCGACAGGATTTGCGGCATTTAAATGTTTTCAGTGTGGACCCTCCAGGTTGCAAAGATATTGATGATGCACTTCACTGTACTGCTCTTTCAAATGGAAATTTTGAAGTTGGAGTCCATATTGCTGATGTAACAAATTTTGTTCATCCGGGCACTGCATTGGATGACGAGGCTGCACAAAGGGGCACATCAGTCTACCTTGTTGAGCGGAGAATAGATATGCTTCCGAAACCATTAACAGAAGATATATGTTCTCTTCGAGCTGATGTGGAAAGACTGGCATTTTCAGTAATTTGGGAAATGACACCTGAAGCCGATATTGTTTCTACTAGCTACACCAAAAGCATCATTAAGTCAAGTGCTGCATTATCTTATGTTGAAGCTCAGGCAAGGATGGATGACAGTCGATTGATGGATCCAATAACTAGAGACTTGAGAAATATGAATGCTTTAGCAAAGAAAATGAGGTTGAGACGAATTGAGAGAGGAGCTTTGACTCTTGCTTCTGCTGAAGTCAAATTTCAAATTGACACTGAGACGCATGATCCTCTTGATATTGGTATGTATCAAATTCGAGAAGCTAACCAAATGGTTGAGGAGTTTATGCTTGCAGCAAATGTTTCGGTAGCAGAAAAGATTCTTAAACATTTCCCGCTGTGTTCATTATTAAGGCGCCATCCTACTCCTACTAAAGAGATGCTCGAACCTTTGATCCGCACAGCTGTAGCTGTTGGTCTTGATTTGGATGTCTCATCATCCAAAGCTTTGGCTGATTCTCTTGATCGTGCATTGGGTGATGATCCATACTTCAATAAGCTGATCAGAATACTAGCTACTAGATGTATGACACAGGCAGTTTACTTCTATAGTGGAGACCTCAGTCCTCCAGAATATCAACATTATGGGCTTGCAGCTCGTCTGTATACCCATTTCACCTCTCCTATTCGACGATACGCAGATGTCATTGTGCACAGATTGCTTGCTGCATCTTTAGGAATATTCAAACTCCCAACATTATTCCTTGACAGACCGAAACTCACTACAATCGCAGATAGTATGAAATACTCTCTGCACCTCAGTTATTTGTTACGATGA

Protein sequence

MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCGASICKKCDSSVARLGASTSPILVLDTNVVLTQIDLLENPAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTYIKDMSGESKNDRNDRAIRVAAQWYQNHLGGATRVLLITNDRENRRKAIEEGIGAETIESYVKSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADDEDDEEEDVHLVPGSADDAPRAASVLQGSSGDSSSSSPRPAGRVIGIIKRNWHSYCGSLDPMPMPAGSGGIAYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVRSIGEIGDRDTESEVVLIENDINSRPFSSQVMACLPPLPWSVSPVDIANPIRQDLRHLNVFSVDPPGCKDIDDALHCTALSNGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERRIDMLPKPLTEDICSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQARMDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVSSSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAARLYTHFTSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTIADSMKYSLHLSYLLR*

Homology

[Close]

BLAST of CSPI07G07820.1 vs. ExPASy Swiss-Prot
Match: Q9SHL7 (Exosome complex exonuclease RRP44 homolog A OS=Arabidopsis thaliana OX=3702 GN=RRP44A PE=2 SV=2)

HSP 1 Score: 1303.5 bits (3372), Expect = 0.0e+00
Identity = 643/824 (78.03%), Postives = 733/824 (88.96%), Query Frame = 0


Query: 1   MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCGASICKKCDSSVARLGASTSPILVLDTNV 60
           ML +K F KKT+ G++ KQVRE YLRDDIYCGA  CK CDSS ARL  S+S I+V+DTNV
Sbjct: 1   MLQSKVFNKKTRGGRIQKQVREVYLRDDIYCGAFSCKSCDSSAARL--SSSKIIVVDTNV 60

Query: 61  VLTQIDLLENPAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY 120
           VL QIDLLEN AID VV+LSVVLDEVKN+N SVYNR+R LCSNP R+F+VFSN  HKDTY
Sbjct: 61  VLHQIDLLENKAIDTVVVLSVVLDEVKNRNRSVYNRIRLLCSNPARQFYVFSNHVHKDTY 120

Query: 121 IKDMSGESKNDRNDRAIRVAAQWYQNHLGGATRVLLITNDRENRRKAIEEGIGAETIESY 180
           ++ M  ES ND NDRAIRVA  WYQ HLG  ++VLL+TNDREN+RKA EEGI AETIE+Y
Sbjct: 121 VQAMEKESANDHNDRAIRVATLWYQKHLGDTSQVLLVTNDRENKRKATEEGISAETIEAY 180

Query: 181 VKSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGK 240
           VKSLGQ  LLDLL Q  NED  MED +D RPSKRK++Y EHKPMSEIT+GLHRGIYHQGK
Sbjct: 181 VKSLGQPELLDLLAQPTNEDITMEDADDSRPSKRKLIYQEHKPMSEITAGLHRGIYHQGK 240

Query: 241 LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADD 300
           LRVNR+NP+EAYVGSESIG+EIIIYGR+NMNRAFDGD+VAVELL RDQW +EK+L+IA++
Sbjct: 241 LRVNRFNPYEAYVGSESIGEEIIIYGRSNMNRAFDGDIVAVELLPRDQWQDEKALSIAEE 300

Query: 301 EDDEEEDVHLVPGSADDAPRAASVLQGSSGDSSSSSPRPAGRVIGIIKRNWHSYCGSLDP 360
           +D+E++ VHL P + DDAPR +++   +SGD +++  RP+GRV+G+I+RNWHSYCGSL+P
Sbjct: 301 DDEEDDTVHLAPDNVDDAPRTSNLSHETSGDKNAAPVRPSGRVVGVIRRNWHSYCGSLEP 360

Query: 361 MPMPAGSGGIAYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR 420
           M +PAGSGG A+ALFVSKDRRIPKIRI TRQL+NLLD RI+VAVDSWDR SRYPSGHYVR
Sbjct: 361 MSLPAGSGGTAHALFVSKDRRIPKIRINTRQLQNLLDMRIVVAVDSWDRQSRYPSGHYVR 420

Query: 421 SIGEIGDRDTESEVVLIENDINSRPFSSQVMACLPPLPWSVSPVDIANPIRQDLRHLNVF 480
            IG+IGD++TE+EVVLIEND++  PFSSQV+ACLPPLPWSVS  D++NP+RQDLRHL VF
Sbjct: 421 PIGKIGDKETETEVVLIENDVDYSPFSSQVLACLPPLPWSVSSEDVSNPVRQDLRHLLVF 480

Query: 481 SVDPPGCKDIDDALHCTALSNGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERR 540
           SVDPPGCKDIDDALHCT+L NGNFE+GVHIADVTNFVHPGT LDDEA++RGTSVYLVERR
Sbjct: 481 SVDPPGCKDIDDALHCTSLPNGNFELGVHIADVTNFVHPGTPLDDEASKRGTSVYLVERR 540

Query: 541 IDMLPKPLTEDICSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQAR 600
           IDMLPKPLTEDICSLRADVERLAFSVIWEM+P+A+I+ST +TKSIIKSSAALSY+EAQAR
Sbjct: 541 IDMLPKPLTEDICSLRADVERLAFSVIWEMSPDAEIISTRFTKSIIKSSAALSYIEAQAR 600

Query: 601 MDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI 660
           MDDSRL D +T DLRNMN LAK MR RRI+RGALTLASAEVKF ID E HDPL+IGMYQI
Sbjct: 601 MDDSRLTDSLTTDLRNMNTLAKIMRQRRIDRGALTLASAEVKFDIDPENHDPLNIGMYQI 660

Query: 661 REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS 720
            EANQMVEEFMLAANVSVA +ILK FP CSLLRRHPTPT+EMLEPL+RTA A+GL LDVS
Sbjct: 661 LEANQMVEEFMLAANVSVAGQILKLFPSCSLLRRHPTPTREMLEPLLRTAAAIGLTLDVS 720

Query: 721 SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAARLYTHF 780
           SSKALADSLDRA+G+DPYFNKLIRILATRCMTQAVYF SGDLSPPEY HYGLAA LYTHF
Sbjct: 721 SSKALADSLDRAVGEDPYFNKLIRILATRCMTQAVYFCSGDLSPPEYHHYGLAAPLYTHF 780

Query: 781 TSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTIADSMKY 825
           TSPIRRYADV VHRLLAASLGI+KLPT+F DRP+LT++AD++ Y
Sbjct: 781 TSPIRRYADVFVHRLLAASLGIYKLPTVFQDRPQLTSVADNLNY 822

[Close]

BLAST of CSPI07G07820.1 vs. ExPASy Swiss-Prot
Match: Q9CSH3 (Exosome complex exonuclease RRP44 OS=Mus musculus OX=10090 GN=Dis3 PE=1 SV=4)

HSP 1 Score: 766.1 bits (1977), Expect = 4.0e-220
Identity = 415/846 (49.05%), Postives = 565/846 (66.78%), Query Frame = 0


Query: 1   MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCGASICKKCDSSVARLGASTSP-------- 60
           ML +K+F+KKT++G V+K VREHYLRDDI CGA  C  C  + A       P        
Sbjct: 1   MLRSKTFLKKTRAGGVVKIVREHYLRDDIGCGAPACSACGGAHAGPALELQPRDQASSLC 60

Query: 61  ----ILVLDTNVVLTQIDLLENPAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRF 120
                L+ DTNV+L QID+LE+PAI +V++L  V+ EV+N++  +Y R+R + +N  + F
Sbjct: 61  PWPHYLLPDTNVLLHQIDVLEHPAIRNVIVLQTVMQEVRNRSAPIYKRIRDVTNNQEKHF 120

Query: 121 FVFSNEHHKDTYIKDMSGESKNDRNDRAIRVAAQWYQNHL-----GGATRVLLITNDREN 180
           + F+NEHHK+TYI+   GE+ NDRNDRAIRVAA+WY  HL         +V+LITNDR+N
Sbjct: 121 YTFTNEHHKETYIEQEQGENANDRNDRAIRVAAKWYNEHLKRVAADSQLQVILITNDRKN 180

Query: 181 RRKAIEEGIGAETIESYVKSL-GQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHK 240
           + KA++EGI A T E YVKSL     L+D L   ++E   M ++E       K+++SEH 
Sbjct: 181 KEKAVQEGIPAFTCEEYVKSLTANPELIDRLAYLSDE---MNEIE-----SGKIIFSEHL 240

Query: 241 PMSEITSGLHRGIYHQGKLRVNRYNPFEAYV---GSESIGDEIIIYGRTNMNRAFDGDVV 300
           P+S++  G+  G Y QG  R +R N  EA V   G +    EI+I G  ++NRA   D+V
Sbjct: 241 PLSKLQQGIKSGSYLQGTFRASRENYLEATVWIHGDKEEEKEILIQGIKHLNRAVHEDIV 300

Query: 301 AVELLSRDQWHEEKSLTIADDEDDEEEDVHLVPGSADDAPRAASVLQGSSGDSSSSSPRP 360
           AVELL R QW    S+ + DDE   E+DV        D  R   +        S    RP
Sbjct: 301 AVELLPRSQWVAPSSV-VLDDEGQNEDDVE------KDEERELLLKTA----VSEKMLRP 360

Query: 361 AGRVIGIIKRNWHSYCGSLDPMPMPAGSGGIAYALFVSKDRRIPKIRIQTRQLENLLDKR 420
            GRV+GIIKRNW  YCG L    +          LF   D+RIP+IRI+TRQ   L  +R
Sbjct: 361 TGRVVGIIKRNWRPYCGMLSKSDIKES----RRHLFTPADKRIPRIRIETRQASALEGRR 420

Query: 421 IIVAVDSWDRLSRYPSGHYVRSIGEIGDRDTESEVVLIENDINSRPFSSQVMACLPPLPW 480
           IIVA+D W R SRYP+GH+V+++G++G+++TE+EV+L+E+D+  +PFS  V++ LP +PW
Sbjct: 421 IIVAIDGWPRNSRYPNGHFVKNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPRMPW 480

Query: 481 SVSPVDIANPIRQDLRHLNVFSVDPPGCKDIDDALHCTALSNGNFEVGVHIADVTNFVHP 540
           S++  D+ N  R+DLRHL V SVDPPGC DIDDALHC  LSNGN EVGVHIADV++F+ P
Sbjct: 481 SITEEDMKN--REDLRHLCVCSVDPPGCTDIDDALHCRELSNGNLEVGVHIADVSHFIRP 540

Query: 541 GTALDDEAAQRGTSVYLVERRIDMLPKPLTEDICSLRADVERLAFSVIWEMTPEADIVST 600
           G ALD E+A+RGT+VYL E+RIDM+P+ L+ ++CSLR++V+RLAFS IWEM   A+I+ T
Sbjct: 541 GNALDQESARRGTTVYLCEKRIDMVPELLSSNLCSLRSNVDRLAFSCIWEMNHNAEILKT 600

Query: 601 SYTKSIIKSSAALSYVEAQARMDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLASA 660
            +TKS+I S A+L+Y EAQ R+D + + D IT  LR +N LAK ++  RIE+GALTL+S 
Sbjct: 601 RFTKSVINSKASLTYAEAQMRIDSAAMNDDITTSLRGLNQLAKILKKGRIEKGALTLSSP 660

Query: 661 EVKFQIDTETHDPLDIGMYQIREANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPT 720
           E++F +D+ETHDP+D+   ++RE N MVEEFML AN+SVA+KI + F   +LLR+HP P 
Sbjct: 661 EIRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPP 720

Query: 721 KEMLEPLIRTAVAVGLDLDVSSSKALADSLDRALGDD-PYFNKLIRILATRCMTQAVYFY 780
               + L++ A +  L +   ++K+LADSLDRA   D PY N L+RILATRCM QAVYF 
Sbjct: 721 PSNYDILVKAAKSKNLQIKTDTAKSLADSLDRAESPDFPYLNTLLRILATRCMMQAVYFC 780

Query: 781 SGDLSPPEYQHYGLAARLYTHFTSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTI 825
           SG     ++ HYGLA+ +YTHFTSPIRRYAD+IVHRLLA ++G         D+ KL+ I
Sbjct: 781 SG--MDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTYPELTDKHKLSDI 819

[Close]

BLAST of CSPI07G07820.1 vs. ExPASy Swiss-Prot
Match: Q9Y2L1 (Exosome complex exonuclease RRP44 OS=Homo sapiens OX=9606 GN=DIS3 PE=1 SV=2)

HSP 1 Score: 760.4 bits (1962), Expect = 2.2e-218
Identity = 414/848 (48.82%), Postives = 557/848 (65.68%), Query Frame = 0


Query: 1   MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCGASICKKCDSSVARLGASTSP-------- 60
           ML +K+F+KKT++G VMK VREHYLRDDI CGA  C  C    A  G +  P        
Sbjct: 1   MLKSKTFLKKTRAGGVMKIVREHYLRDDIGCGAPGCAACGG--AHEGPALEPQPQDPASS 60

Query: 61  ------ILVLDTNVVLTQIDLLENPAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLR 120
                  L+ DTNV+L QID+LE+PAI +V++L  VL EV+N++  VY R+R + +N  +
Sbjct: 61  VCPQPHYLLPDTNVLLHQIDVLEDPAIRNVIVLQTVLQEVRNRSAPVYKRIRDVTNNQEK 120

Query: 121 RFFVFSNEHHKDTYIKDMSGESKNDRNDRAIRVAAQWYQNHL-----GGATRVLLITNDR 180
            F+ F+NEHH++TY++   GE+ NDRNDRAIRVAA+WY  HL         +V+ ITNDR
Sbjct: 121 HFYTFTNEHHRETYVEQEQGENANDRNDRAIRVAAKWYNEHLKKMSADNQLQVIFITNDR 180

Query: 181 ENRRKAIEEGIGAETIESYVKSL-GQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSE 240
            N+ KAIEEGI A T E YVKSL     L+D L   + E   +E          K+++SE
Sbjct: 181 RNKEKAIEEGIPAFTCEEYVKSLTANPELIDRLACLSEEGNEIE--------SGKIIFSE 240

Query: 241 HKPMSEITSGLHRGIYHQGKLRVNRYNPFEAYV---GSESIGDEIIIYGRTNMNRAFDGD 300
           H P+S++  G+  G Y QG  R +R N  EA V   G      EII+ G  ++NRA   D
Sbjct: 241 HLPLSKLQQGIKSGTYLQGTFRASRENYLEATVWIHGDNEENKEIILQGLKHLNRAVHED 300

Query: 301 VVAVELLSRDQWHEEKSLTIADDEDDEEEDVHLVPGSADDAPRAASVLQGSSGDSSSSSP 360
           +VAVELL + QW    S+ +  DE   EEDV       ++  R            S    
Sbjct: 301 IVAVELLPKSQWVAPSSV-VLHDEGQNEEDVE----KEEETERMLKTA------VSEKML 360

Query: 361 RPAGRVIGIIKRNWHSYCGSLDPMPMPAGSGGIAYALFVSKDRRIPKIRIQTRQLENLLD 420
           +P GRV+GIIKRNW  YCG L    +          LF   D+RIP+IRI+TRQ   L  
Sbjct: 361 KPTGRVVGIIKRNWRPYCGMLSKSDIKES----RRHLFTPADKRIPRIRIETRQASTLEG 420

Query: 421 KRIIVAVDSWDRLSRYPSGHYVRSIGEIGDRDTESEVVLIENDINSRPFSSQVMACLPPL 480
           +RIIVA+D W R SRYP+GH+VR++G++G+++TE+EV+L+E+D+  +PFS  V++ LP +
Sbjct: 421 RRIIVAIDGWPRNSRYPNGHFVRNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPKM 480

Query: 481 PWSVSPVDIANPIRQDLRHLNVFSVDPPGCKDIDDALHCTALSNGNFEVGVHIADVTNFV 540
           PWS++  D+ N  R+DLRHL + SVDPPGC DIDDALHC  L NGN EVGVHIADV++F+
Sbjct: 481 PWSITEKDMKN--REDLRHLCICSVDPPGCTDIDDALHCRELENGNLEVGVHIADVSHFI 540

Query: 541 HPGTALDDEAAQRGTSVYLVERRIDMLPKPLTEDICSLRADVERLAFSVIWEMTPEADIV 600
            PG ALD E+A+RGT+VYL E+RIDM+P+ L+ ++CSL+ DV+RLAFS IWEM   A+I+
Sbjct: 541 RPGNALDQESARRGTTVYLCEKRIDMVPELLSSNLCSLKCDVDRLAFSCIWEMNHNAEIL 600

Query: 601 STSYTKSIIKSSAALSYVEAQARMDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLA 660
            T +TKS+I S A+L+Y EAQ R+D + + D IT  LR +N LAK ++ RRIE+GALTL+
Sbjct: 601 KTKFTKSVINSKASLTYAEAQLRIDSANMNDDITTSLRGLNKLAKILKKRRIEKGALTLS 660

Query: 661 SAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPT 720
           S EV+F +D+ETHDP+D+   ++RE N MVEEFML AN+SVA+KI + F   +LLR+HP 
Sbjct: 661 SPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPA 720

Query: 721 PTKEMLEPLIRTAVAVGLDLDVSSSKALADSLDRALGDD-PYFNKLIRILATRCMTQAVY 780
           P     E L++ A +  L++   ++K+LA+SLD+A     PY N L+RILATRCM QAVY
Sbjct: 721 PPPSNYEILVKAARSRNLEIKTDTAKSLAESLDQAESPTFPYLNTLLRILATRCMMQAVY 780

Query: 781 FYSGDLSPPEYQHYGLAARLYTHFTSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLT 825
           F SG     ++ HYGLA+ +YTHFTSPIRRYADVIVHRLLA ++G         D+ KL 
Sbjct: 781 FCSG--MDNDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTYPELTDKHKLA 819

[Close]

BLAST of CSPI07G07820.1 vs. ExPASy Swiss-Prot
Match: P37202 (Exosome complex exonuclease dis3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dis3 PE=1 SV=1)

HSP 1 Score: 660.2 bits (1702), Expect = 3.1e-188
Identity = 368/851 (43.24%), Postives = 524/851 (61.57%), Query Frame = 0


Query: 4   NKSFVKKTKSGKVMKQVREHYLRDDIYCGASICKKCDSSVAR--LGASTSPI-------- 63
           ++ FV+ T+ GKV K VRE YLR+DI C +  C  C S + +   G    PI        
Sbjct: 19  DRVFVRATR-GKVQKVVREQYLRNDIPCQSRACPLCRSKLPKDSRGNVLEPILSEKPMFL 78

Query: 64  -------LVLDTNVVLTQIDLLENP-AIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPL 123
                  L+ D+N+    ID LE+P    DV++L  V  E+ +K++ +YNR++ LC    
Sbjct: 79  EKFGHHYLIPDSNIFYHCIDALEHPNNFFDVIILQTVFSEISSKSIPLYNRMKRLCQEKT 138

Query: 124 RRFFVFSNEHHKDTYIKDMSGESKNDRNDRAIRVAAQWYQNHLGG-ATRVLLITNDRENR 183
           +RF  FSNE   DT+++ +  ES NDRNDRAIR AA W+ +HL     +++L+T+DREN 
Sbjct: 139 KRFTPFSNEFFVDTFVERLDDESANDRNDRAIRNAASWFASHLASLGIKIVLLTDDRENA 198

Query: 184 RKAIEEGIGAETIESYVKSLGQTH-LLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKP 243
           R A E+GI   T++ YV+ L  +  LLD++   A+  A+ E VE    S  K +Y  H  
Sbjct: 199 RLAAEQGIQVSTLKDYVQYLPDSEILLDMVSAIADAIASKEQVE----SGTKNVYELHWS 258

Query: 244 MSEITSGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVEL 303
           MS + + +  G  H+G + ++ YN  E  V        +++ GR N+NRA  GD+V +++
Sbjct: 259 MSRLLACIKNGEVHKGLINISTYNYLEGSVVVPGYNKPVLVSGRENLNRAVQGDIVCIQI 318

Query: 304 LSRDQWHEEKSLTIADDEDDEEEDVHLVPGSADDAPRAASVLQGSSGDSSSSSPRPAGRV 363
           L +DQW  E     A++  D++EDV +   +  D+ R   +        +  +  P  +V
Sbjct: 319 LPQDQWKTE-----AEEIADDDEDVVVSTAAEPDSARINDLEL-----ITKRNAHPTAKV 378

Query: 364 IGIIKRNWHSYCGSLDPMPMPAGSGGIAY-ALFVSKDRRIPKIRIQTRQLENLLDKRIIV 423
           +GI+KRNW  Y G +D   +    GG     L    DRR+PKIR +TRQ   L+ +RI+V
Sbjct: 379 VGILKRNWRPYVGHVDNATIAQSKGGSQQTVLLTPMDRRVPKIRFRTRQAPRLVGRRIVV 438

Query: 424 AVDSWDRLSRYPSGHYVRSIGEIGDRDTESEVVLIENDINSRPFSSQVMACLPP--LPWS 483
           A+D WD  SRYP GH+VR +GE+  ++ E+E +L+E D+  RPF   V+ CLP     W 
Sbjct: 439 AIDLWDASSRYPEGHFVRDLGEMETKEAETEALLLEYDVQHRPFPKAVLDCLPEEGHNWK 498

Query: 484 VSPVDIANPI---RQDLRHLNVFSVDPPGCKDIDDALHCTALSNGNFEVGVHIADVTNFV 543
           V P D  +P+   R+D R   + S+DPPGC+DIDDALH   L NGN+EVGVHIADVT+FV
Sbjct: 499 V-PADKTHPLWKNRKDFRDKLICSIDPPGCQDIDDALHACVLPNGNYEVGVHIADVTHFV 558

Query: 544 HPGTALDDEAAQRGTSVYLVERRIDMLPKPLTEDICSLRADVERLAFSVIWEMTPEADIV 603
            P T++D EAA RGT+VYLV++RIDMLP  L  D+CSLR  VER AFS IWEM   A+I+
Sbjct: 559 KPNTSMDSEAASRGTTVYLVDKRIDMLPMLLGTDLCSLRPYVERFAFSCIWEMDENANII 618

Query: 604 STSYTKSIIKSSAALSYVEAQARMDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLA 663
              +TKS+I S  A SY +AQAR+DD ++ DP+T+ +R +  L+K ++ +R++ GAL LA
Sbjct: 619 KVHFTKSVIASKEAFSYADAQARIDDQKMQDPLTQGMRVLLKLSKILKQKRMDEGALNLA 678

Query: 664 SAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPT 723
           S EV+ Q D ET DP+D+ + Q+ E N +VEEFML AN+SVA+KI   FP  ++LRRH  
Sbjct: 679 SPEVRIQTDNETSDPMDVEIKQLLETNSLVEEFMLLANISVAQKIYDAFPQTAVLRRHAA 738

Query: 724 P---TKEMLEPLIRTAVAVGLDLDVSSSKALADSLDRALG-DDPYFNKLIRILATRCMTQ 783
           P     + L+ ++R  V  G+ L   +SK+LA SLD  +   +PYFN L+RIL TRCM  
Sbjct: 739 PPLTNFDSLQDILR--VCKGMHLKCDTSKSLAKSLDECVDPKEPYFNTLLRILTTRCMLS 798

Query: 784 AVYFYSGDLSPPEYQHYGLAARLYTHFTSPIRRYADVIVHRLLAASLGIFKLPTLFLDRP 825
           A YF SG  +PP+++HYGLA+ +YTHFTSPIRRYADV+ HR LAA++    +     D+ 
Sbjct: 799 AEYFCSGTFAPPDFRHYGLASPIYTHFTSPIRRYADVLAHRQLAAAIDYETINPSLSDKS 851

[Close]

BLAST of CSPI07G07820.1 vs. ExPASy Swiss-Prot
Match: Q08162 (Exosome complex exonuclease DIS3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DIS3 PE=1 SV=1)

HSP 1 Score: 624.8 bits (1610), Expect = 1.4e-177
Identity = 362/868 (41.71%), Postives = 515/868 (59.33%), Query Frame = 0


Query: 5   KSFVKKTKSGKVMKQVREHYLRDDIYCGASICKKC--------DSSVARLGASTSPI--- 64
           K FV ++++G   K VREHYLR DI C +  C KC         + + +   S SP+   
Sbjct: 22  KVFV-RSRNGGATKIVREHYLRSDIPCLSRSCTKCPQIVVPDAQNELPKFILSDSPLELS 81

Query: 65  -------LVLDTNVVLTQIDLLENP-AIDDVVMLSVVLDEVKNKNLSVYNRVRALC--SN 124
                  +VLDTNVVL  IDLLENP    DV++  +VLDEV+NK+  VY R+R LC  S+
Sbjct: 82  APIGKHYVVLDTNVVLQAIDLLENPNCFFDVIVPQIVLDEVRNKSYPVYTRLRTLCRDSD 141

Query: 125 PLRRFFVFSNEHHKDTYIKDMSGESKNDRNDRAIRVAAQWYQNHLGG-ATRVLLITNDRE 184
             +RF VF NE  + T+++ +  E+ NDRNDRAIR   QWY  HL      V+L+TNDR 
Sbjct: 142 DHKRFIVFHNEFSEHTFVERLPNETINDRNDRAIRKTCQWYSEHLKPYDINVVLVTNDRL 201

Query: 185 NRR---KAIEEGIGAETIESYVKSL-GQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLY 244
           NR    K +E  I  +++  Y++ L     + D + Q  + D ++E     R +     +
Sbjct: 202 NREAATKEVESNIITKSLVQYIELLPNADDIRDSIPQMDSFDKDLE-----RDTFSDFTF 261

Query: 245 SEHKPMSEITSGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDV 304
            E+   + +  GL  G+ +QG ++++ YN  E  V        ++I G+ N+NRAF+GD 
Sbjct: 262 PEYYSTARVMGGLKNGVLYQGNIQISEYNFLEGSVSLPRFSKPVLIVGQKNLNRAFNGDQ 321

Query: 305 VAVELLSRDQWHEEKSLTIADDEDDEEEDVHLVPGSADDAPRAAS------------VLQ 364
           V VELL + +W    S+ +  +  D  ++  +  G  DD   ++S            + +
Sbjct: 322 VIVELLPQSEWKAPSSIVLDSEHFDVNDNPDIEAGDDDDNNESSSNTTVISDKQRRLLAK 381

Query: 365 GSSGDSSSSSPRPAGRVIGIIKRNWHSYCGSLDPMPMPAGSGGIAYALFVSKDRRIPKIR 424
            +     S   +P  +V+ I +R+W  Y G L P  +   S        +  D+ +PK+R
Sbjct: 382 DAMIAQRSKKIQPTAKVVYIQRRSWRQYVGQLAPSSVDPQSSSTQNVFVILMDKCLPKVR 441

Query: 425 IQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVRSIGEIGDRDTESEVVLIENDINSRPF 484
           I+TR+   LLDKRI++++DSW    +YP GH+VR +G I     E+E +L+E+D+  RPF
Sbjct: 442 IRTRRAAELLDKRIVISIDSWPTTHKYPLGHFVRDLGTIESAQAETEALLLEHDVEYRPF 501

Query: 485 SSQVMACLPP--LPWSVSPVDIANP----------IRQDLRHLNVFSVDPPGCKDIDDAL 544
           S +V+ CLP     W  +P  + +P           R+DLR   + S+DPPGC DIDDAL
Sbjct: 502 SKKVLECLPAEGHDWK-APTKLDDPEAVSKDPLLTKRKDLRDKLICSIDPPGCVDIDDAL 561

Query: 545 HCTALSNGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERRIDMLPKPLTEDICS 604
           H   L NGN+EVGVHIADVT+FV PGTALD E A RGTSVYLV++RIDMLP  L  D+CS
Sbjct: 562 HAKKLPNGNWEVGVHIADVTHFVKPGTALDAEGAARGTSVYLVDKRIDMLPMLLGTDLCS 621

Query: 605 LRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQARMDDSRLMDPITRDL 664
           L+  V+R AFSVIWE+   A+IV+ ++ KS+I+S  A SY +AQ R+DD    D +T  +
Sbjct: 622 LKPYVDRFAFSVIWELDDSANIVNVNFMKSVIRSREAFSYEQAQLRIDDKTQNDELTMGM 681

Query: 665 RNMNALAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLAA 724
           R +  L+ K++ +R+E GAL LAS EVK  +D+ET DP ++ + ++   N +VEEFML A
Sbjct: 682 RALLKLSVKLKQKRLEAGALNLASPEVKVHMDSETSDPNEVEIKKLLATNSLVEEFMLLA 741

Query: 725 NVSVAEKILKHFPLCSLLRRHPTPTK---EMLEPLIRTAVAVGLDLDVSSSKALADSLDR 784
           N+SVA KI   FP  ++LRRH  P     E+L  ++ T   + + L+  SSKALADSLDR
Sbjct: 742 NISVARKIYDAFPQTAMLRRHAAPPSTNFEILNEMLNTRKNMSISLE--SSKALADSLDR 801

Query: 785 ALG-DDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAARLYTHFTSPIRRYADV 819
            +  +DPYFN L+RI++TRCM  A YFYSG  S P+++HYGLA  +YTHFTSPIRRY DV
Sbjct: 802 CVDPEDPYFNTLVRIMSTRCMMAAQYFYSGAYSYPDFRHYGLAVDIYTHFTSPIRRYCDV 861

[Close]

BLAST of CSPI07G07820.1 vs. ExPASy TrEMBL
Match: A0A0A0K821 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G074840 PE=3 SV=1)

HSP 1 Score: 1612.0 bits (4173), Expect = 0.0e+00
Identity = 818/824 (99.27%), Postives = 820/824 (99.51%), Query Frame = 0


Query: 1   MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCGASICKKCDSSVARLGASTSPILVLDTNV 60
           MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCGASICKKCDSSVARLGASTSPILVLDTNV
Sbjct: 1   MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCGASICKKCDSSVARLGASTSPILVLDTNV 60

Query: 61  VLTQIDLLENPAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY 120
           VLTQI LLEN AIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY
Sbjct: 61  VLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY 120

Query: 121 IKDMSGESKNDRNDRAIRVAAQWYQNHLGGATRVLLITNDRENRRKAIEEGIGAETIESY 180
           IKDMSGESKNDRNDRAIRVAAQWYQNHLGGATRVLLITNDRENRRKAIEEGIGAETIESY
Sbjct: 121 IKDMSGESKNDRNDRAIRVAAQWYQNHLGGATRVLLITNDRENRRKAIEEGIGAETIESY 180

Query: 181 VKSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGK 240
           VKSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGK
Sbjct: 181 VKSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGK 240

Query: 241 LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADD 300
           LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADD
Sbjct: 241 LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADD 300

Query: 301 EDDEEEDVHLVPGSADDAPRAASVLQGSSGDSSSSSPRPAGRVIGIIKRNWHSYCGSLDP 360
           EDDEEEDVHLVPGSADDAPRAASVLQGSSGDSSSSSPRPAGRVIGIIKRNWHSYCGSLDP
Sbjct: 301 EDDEEEDVHLVPGSADDAPRAASVLQGSSGDSSSSSPRPAGRVIGIIKRNWHSYCGSLDP 360

Query: 361 MPMPAGSGGIAYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR 420
           MPMPAGSGGIAYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR
Sbjct: 361 MPMPAGSGGIAYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR 420

Query: 421 SIGEIGDRDTESEVVLIENDINSRPFSSQVMACLPPLPWSVSPVDIANPIRQDLRHLNVF 480
           SIGEIGDRDTESEVVLIENDINSRPFSSQVM CLPPLPWSVSPVDIANPIRQDLRHLNVF
Sbjct: 421 SIGEIGDRDTESEVVLIENDINSRPFSSQVMTCLPPLPWSVSPVDIANPIRQDLRHLNVF 480

Query: 481 SVDPPGCKDIDDALHCTALSNGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERR 540
           SVDPPGCKDIDDALHCTALSNGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERR
Sbjct: 481 SVDPPGCKDIDDALHCTALSNGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERR 540

Query: 541 IDMLPKPLTEDICSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQAR 600
           IDMLPKPLTEDICSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQAR
Sbjct: 541 IDMLPKPLTEDICSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQAR 600

Query: 601 MDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI 660
           MDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI
Sbjct: 601 MDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI 660

Query: 661 REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS 720
           REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS
Sbjct: 661 REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS 720

Query: 721 SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAARLYTHF 780
           SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAARLYTHF
Sbjct: 721 SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAARLYTHF 780

Query: 781 TSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTIADSMKY 825
           TSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTIAD++ Y
Sbjct: 781 TSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTIADNLNY 824

[Close]

BLAST of CSPI07G07820.1 vs. ExPASy TrEMBL
Match: A0A5A7SKL0 (Exosome complex exonuclease RRP44-like protein A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00330 PE=3 SV=1)

HSP 1 Score: 1597.4 bits (4135), Expect = 0.0e+00
Identity = 809/824 (98.18%), Postives = 817/824 (99.15%), Query Frame = 0


Query: 1   MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCGASICKKCDSSVARLGASTSPILVLDTNV 60
           MLHNKSFVKKTKSG+VMKQVREHYLRDDIYCGASICKKCDSSVARLG+STSPILVLDTNV
Sbjct: 1   MLHNKSFVKKTKSGRVMKQVREHYLRDDIYCGASICKKCDSSVARLGSSTSPILVLDTNV 60

Query: 61  VLTQIDLLENPAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY 120
           VLTQIDLLENPAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY
Sbjct: 61  VLTQIDLLENPAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY 120

Query: 121 IKDMSGESKNDRNDRAIRVAAQWYQNHLGGATRVLLITNDRENRRKAIEEGIGAETIESY 180
           IKDMSGESKNDRNDRAIRVAA WYQNHLGGATRVLLITNDRENRRKAIEEGI AETIESY
Sbjct: 121 IKDMSGESKNDRNDRAIRVAALWYQNHLGGATRVLLITNDRENRRKAIEEGICAETIESY 180

Query: 181 VKSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGK 240
           V+SLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGK
Sbjct: 181 VRSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGK 240

Query: 241 LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADD 300
           LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIAD+
Sbjct: 241 LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADE 300

Query: 301 EDDEEEDVHLVPGSADDAPRAASVLQGSSGDSSSSSPRPAGRVIGIIKRNWHSYCGSLDP 360
           EDDEEEDVHLVPGS+DDAPRAAS LQGSSGDSSSSSPRPAGRVIGIIKRNWHSYCGSLDP
Sbjct: 301 EDDEEEDVHLVPGSSDDAPRAASALQGSSGDSSSSSPRPAGRVIGIIKRNWHSYCGSLDP 360

Query: 361 MPMPAGSGGIAYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR 420
           MPMPAGSGG+AYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR
Sbjct: 361 MPMPAGSGGVAYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR 420

Query: 421 SIGEIGDRDTESEVVLIENDINSRPFSSQVMACLPPLPWSVSPVDIANPIRQDLRHLNVF 480
           SIGEIGDRDTESEVVLIENDINSRPFSSQVMACLPPLPWSVSPVDIANPIRQDLRHLNVF
Sbjct: 421 SIGEIGDRDTESEVVLIENDINSRPFSSQVMACLPPLPWSVSPVDIANPIRQDLRHLNVF 480

Query: 481 SVDPPGCKDIDDALHCTALSNGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERR 540
           SVDPPGCKDIDDALHCTAL NGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERR
Sbjct: 481 SVDPPGCKDIDDALHCTALPNGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERR 540

Query: 541 IDMLPKPLTEDICSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQAR 600
           IDMLPKPLTEDICSLRADVERLAFSVIWEMT EADIVSTSYTKSIIKSSAALSYVEAQAR
Sbjct: 541 IDMLPKPLTEDICSLRADVERLAFSVIWEMTSEADIVSTSYTKSIIKSSAALSYVEAQAR 600

Query: 601 MDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI 660
           MDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI
Sbjct: 601 MDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI 660

Query: 661 REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS 720
           REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS
Sbjct: 661 REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS 720

Query: 721 SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAARLYTHF 780
           SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAA LYTHF
Sbjct: 721 SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAAPLYTHF 780

Query: 781 TSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTIADSMKY 825
           TSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTIAD++ Y
Sbjct: 781 TSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTIADNLNY 824

[Close]

BLAST of CSPI07G07820.1 vs. ExPASy TrEMBL
Match: A0A1S3BZS3 (exosome complex exonuclease RRP44 homolog A OS=Cucumis melo OX=3656 GN=LOC103495216 PE=3 SV=1)

HSP 1 Score: 1597.4 bits (4135), Expect = 0.0e+00
Identity = 809/824 (98.18%), Postives = 817/824 (99.15%), Query Frame = 0


Query: 1   MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCGASICKKCDSSVARLGASTSPILVLDTNV 60
           MLHNKSFVKKTKSG+VMKQVREHYLRDDIYCGASICKKCDSSVARLG+STSPILVLDTNV
Sbjct: 1   MLHNKSFVKKTKSGRVMKQVREHYLRDDIYCGASICKKCDSSVARLGSSTSPILVLDTNV 60

Query: 61  VLTQIDLLENPAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY 120
           VLTQIDLLENPAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY
Sbjct: 61  VLTQIDLLENPAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY 120

Query: 121 IKDMSGESKNDRNDRAIRVAAQWYQNHLGGATRVLLITNDRENRRKAIEEGIGAETIESY 180
           IKDMSGESKNDRNDRAIRVAA WYQNHLGGATRVLLITNDRENRRKAIEEGI AETIESY
Sbjct: 121 IKDMSGESKNDRNDRAIRVAALWYQNHLGGATRVLLITNDRENRRKAIEEGICAETIESY 180

Query: 181 VKSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGK 240
           V+SLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGK
Sbjct: 181 VRSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGK 240

Query: 241 LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADD 300
           LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIAD+
Sbjct: 241 LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADE 300

Query: 301 EDDEEEDVHLVPGSADDAPRAASVLQGSSGDSSSSSPRPAGRVIGIIKRNWHSYCGSLDP 360
           EDDEEEDVHLVPGS+DDAPRAAS LQGSSGDSSSSSPRPAGRVIGIIKRNWHSYCGSLDP
Sbjct: 301 EDDEEEDVHLVPGSSDDAPRAASALQGSSGDSSSSSPRPAGRVIGIIKRNWHSYCGSLDP 360

Query: 361 MPMPAGSGGIAYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR 420
           MPMPAGSGG+AYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR
Sbjct: 361 MPMPAGSGGVAYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR 420

Query: 421 SIGEIGDRDTESEVVLIENDINSRPFSSQVMACLPPLPWSVSPVDIANPIRQDLRHLNVF 480
           SIGEIGDRDTESEVVLIENDINSRPFSSQVMACLPPLPWSVSPVDIANPIRQDLRHLNVF
Sbjct: 421 SIGEIGDRDTESEVVLIENDINSRPFSSQVMACLPPLPWSVSPVDIANPIRQDLRHLNVF 480

Query: 481 SVDPPGCKDIDDALHCTALSNGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERR 540
           SVDPPGCKDIDDALHCTAL NGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERR
Sbjct: 481 SVDPPGCKDIDDALHCTALPNGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERR 540

Query: 541 IDMLPKPLTEDICSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQAR 600
           IDMLPKPLTEDICSLRADVERLAFSVIWEMT EADIVSTSYTKSIIKSSAALSYVEAQAR
Sbjct: 541 IDMLPKPLTEDICSLRADVERLAFSVIWEMTSEADIVSTSYTKSIIKSSAALSYVEAQAR 600

Query: 601 MDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI 660
           MDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI
Sbjct: 601 MDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI 660

Query: 661 REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS 720
           REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS
Sbjct: 661 REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS 720

Query: 721 SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAARLYTHF 780
           SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAA LYTHF
Sbjct: 721 SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAAPLYTHF 780

Query: 781 TSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTIADSMKY 825
           TSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTIAD++ Y
Sbjct: 781 TSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTIADNLNY 824

[Close]

BLAST of CSPI07G07820.1 vs. ExPASy TrEMBL
Match: A0A6J1I5P7 (exosome complex exonuclease RRP44 homolog A-like OS=Cucurbita maxima OX=3661 GN=LOC111470918 PE=3 SV=1)

HSP 1 Score: 1570.8 bits (4066), Expect = 0.0e+00
Identity = 790/824 (95.87%), Postives = 810/824 (98.30%), Query Frame = 0


Query: 1   MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCGASICKKCDSSVARLGASTSPILVLDTNV 60
           MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCG SICKKCDSSVARL ASTSPILVLDTNV
Sbjct: 1   MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCGTSICKKCDSSVARLSASTSPILVLDTNV 60

Query: 61  VLTQIDLLENPAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY 120
           VL QIDLLENPAIDDVVMLS+VLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY
Sbjct: 61  VLNQIDLLENPAIDDVVMLSIVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY 120

Query: 121 IKDMSGESKNDRNDRAIRVAAQWYQNHLGGATRVLLITNDRENRRKAIEEGIGAETIESY 180
           +K+MSGESKNDRNDRAIRVAAQWYQNH+GGATRVLLITNDRENRRKA+EEGI AETIESY
Sbjct: 121 VKEMSGESKNDRNDRAIRVAAQWYQNHIGGATRVLLITNDRENRRKAVEEGICAETIESY 180

Query: 181 VKSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGK 240
           V+SLGQTHLLDLLVQSANEDANME+VED+RPSKRKVLY EHKPMSEITSGLHRGIYHQGK
Sbjct: 181 VRSLGQTHLLDLLVQSANEDANMEEVEDMRPSKRKVLYFEHKPMSEITSGLHRGIYHQGK 240

Query: 241 LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADD 300
           LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIAD+
Sbjct: 241 LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADE 300

Query: 301 EDDEEEDVHLVPGSADDAPRAASVLQGSSGDSSSSSPRPAGRVIGIIKRNWHSYCGSLDP 360
           +DDEEEDVHLVPGSADDAPR  SV+ GS+GDS+SSSPRPAGRVIGIIKRNWHSYCGSLDP
Sbjct: 301 DDDEEEDVHLVPGSADDAPRTTSVV-GSNGDSTSSSPRPAGRVIGIIKRNWHSYCGSLDP 360

Query: 361 MPMPAGSGGIAYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR 420
           MPMPAGSGG+AYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR
Sbjct: 361 MPMPAGSGGVAYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR 420

Query: 421 SIGEIGDRDTESEVVLIENDINSRPFSSQVMACLPPLPWSVSPVDIANPIRQDLRHLNVF 480
           SIGEIGDRDTESEVVLIENDINSRPFSSQV+ACLPPLPWSVSP DIANPIRQDLRHLNVF
Sbjct: 421 SIGEIGDRDTESEVVLIENDINSRPFSSQVLACLPPLPWSVSPADIANPIRQDLRHLNVF 480

Query: 481 SVDPPGCKDIDDALHCTALSNGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERR 540
           SVDPPGCKDIDDALHCTAL NGNFEVGVHIADVTNFVHPGT LDDEAAQRGTSVYLVERR
Sbjct: 481 SVDPPGCKDIDDALHCTALPNGNFEVGVHIADVTNFVHPGTPLDDEAAQRGTSVYLVERR 540

Query: 541 IDMLPKPLTEDICSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQAR 600
           IDMLPKPLTED+CSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQAR
Sbjct: 541 IDMLPKPLTEDVCSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQAR 600

Query: 601 MDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI 660
           MDDSRLMDPITRDLRNMN LAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI
Sbjct: 601 MDDSRLMDPITRDLRNMNTLAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI 660

Query: 661 REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS 720
           REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHP+PTKEMLEPLIRTAVAVGLDLDVS
Sbjct: 661 REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPSPTKEMLEPLIRTAVAVGLDLDVS 720

Query: 721 SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAARLYTHF 780
           SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAA LYTHF
Sbjct: 721 SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAAPLYTHF 780

Query: 781 TSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTIADSMKY 825
           TSPIRRYADVIVHRLLAASLGI+KLPTLFLDRPKLTTIAD++ Y
Sbjct: 781 TSPIRRYADVIVHRLLAASLGIYKLPTLFLDRPKLTTIADNLNY 823

[Close]

BLAST of CSPI07G07820.1 vs. ExPASy TrEMBL
Match: A0A6J1GLL6 (exosome complex exonuclease RRP44 homolog A-like OS=Cucurbita moschata OX=3662 GN=LOC111455103 PE=3 SV=1)

HSP 1 Score: 1567.7 bits (4058), Expect = 0.0e+00
Identity = 787/824 (95.51%), Postives = 809/824 (98.18%), Query Frame = 0


Query: 1   MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCGASICKKCDSSVARLGASTSPILVLDTNV 60
           MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCG SIC+KCDSSVARL ASTSPILVLDTNV
Sbjct: 1   MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCGTSICEKCDSSVARLSASTSPILVLDTNV 60

Query: 61  VLTQIDLLENPAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY 120
           VL QIDLLENPAIDDVVMLS+VLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY
Sbjct: 61  VLNQIDLLENPAIDDVVMLSIVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY 120

Query: 121 IKDMSGESKNDRNDRAIRVAAQWYQNHLGGATRVLLITNDRENRRKAIEEGIGAETIESY 180
           +K+MSGESKNDRNDRAIRVAAQWYQNH+GGATRVLLITNDRENRRKA+EEGI AETIESY
Sbjct: 121 VKEMSGESKNDRNDRAIRVAAQWYQNHIGGATRVLLITNDRENRRKAVEEGICAETIESY 180

Query: 181 VKSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGK 240
           V+SLGQTHLLDLLVQSANED NME+VED+RPSKRKVLY EHKPMSEITSGLHRGIYHQGK
Sbjct: 181 VRSLGQTHLLDLLVQSANEDTNMEEVEDMRPSKRKVLYFEHKPMSEITSGLHRGIYHQGK 240

Query: 241 LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADD 300
           LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIAD+
Sbjct: 241 LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADE 300

Query: 301 EDDEEEDVHLVPGSADDAPRAASVLQGSSGDSSSSSPRPAGRVIGIIKRNWHSYCGSLDP 360
           +DDEEEDVHLVPGSADDAPR  SV+ GS+GDS+SSSPRPAGRVIGIIKRNWHSYCGSLDP
Sbjct: 301 DDDEEEDVHLVPGSADDAPRTTSVV-GSNGDSTSSSPRPAGRVIGIIKRNWHSYCGSLDP 360

Query: 361 MPMPAGSGGIAYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR 420
           MPMPAGSGG+AYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR
Sbjct: 361 MPMPAGSGGVAYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR 420

Query: 421 SIGEIGDRDTESEVVLIENDINSRPFSSQVMACLPPLPWSVSPVDIANPIRQDLRHLNVF 480
           SIGEIGDRDTESEVVLIENDINSRPFSSQV+ACLPPLPWSVSP D+ANPIRQDLRHLNVF
Sbjct: 421 SIGEIGDRDTESEVVLIENDINSRPFSSQVLACLPPLPWSVSPADVANPIRQDLRHLNVF 480

Query: 481 SVDPPGCKDIDDALHCTALSNGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERR 540
           SVDPPGCKDIDDALHCTAL NGNFEVGVHIADVTNFVHPGT LDDEAAQRGTSVYLVERR
Sbjct: 481 SVDPPGCKDIDDALHCTALPNGNFEVGVHIADVTNFVHPGTPLDDEAAQRGTSVYLVERR 540

Query: 541 IDMLPKPLTEDICSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQAR 600
           IDMLPKPLTED+CSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQAR
Sbjct: 541 IDMLPKPLTEDVCSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQAR 600

Query: 601 MDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI 660
           MDDSRLMDPITRDLRNMN LAKKMRLRRI+RGALTLASAEVKFQIDTETHDPLDIGMYQI
Sbjct: 601 MDDSRLMDPITRDLRNMNTLAKKMRLRRIDRGALTLASAEVKFQIDTETHDPLDIGMYQI 660

Query: 661 REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS 720
           REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS
Sbjct: 661 REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS 720

Query: 721 SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAARLYTHF 780
           SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAA LYTHF
Sbjct: 721 SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAAPLYTHF 780

Query: 781 TSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTIADSMKY 825
           TSPIRRYADVIVHRLLAASLGI+KLPTLFLDRPKLTTIAD++ Y
Sbjct: 781 TSPIRRYADVIVHRLLAASLGIYKLPTLFLDRPKLTTIADNLNY 823

[Close]

BLAST of CSPI07G07820.1 vs. NCBI nr
Match: XP_011658916.2 (exosome complex exonuclease RRP44 homolog A [Cucumis sativus] >KAE8645869.1 hypothetical protein Csa_017207 [Cucumis sativus])

HSP 1 Score: 1617.8 bits (4188), Expect = 0.0e+00
Identity = 820/824 (99.51%), Postives = 822/824 (99.76%), Query Frame = 0


Query: 1   MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCGASICKKCDSSVARLGASTSPILVLDTNV 60
           MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCGASICKKCDSSVARLGASTSPILVLDTNV
Sbjct: 1   MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCGASICKKCDSSVARLGASTSPILVLDTNV 60

Query: 61  VLTQIDLLENPAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY 120
           VLTQIDLLENPAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY
Sbjct: 61  VLTQIDLLENPAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY 120

Query: 121 IKDMSGESKNDRNDRAIRVAAQWYQNHLGGATRVLLITNDRENRRKAIEEGIGAETIESY 180
           IKDMSGESKNDRNDRAIRVAAQWYQNHLGGATRVLLITNDRENRRKAIEEGIGAETIESY
Sbjct: 121 IKDMSGESKNDRNDRAIRVAAQWYQNHLGGATRVLLITNDRENRRKAIEEGIGAETIESY 180

Query: 181 VKSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGK 240
           VKSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGK
Sbjct: 181 VKSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGK 240

Query: 241 LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADD 300
           LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADD
Sbjct: 241 LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADD 300

Query: 301 EDDEEEDVHLVPGSADDAPRAASVLQGSSGDSSSSSPRPAGRVIGIIKRNWHSYCGSLDP 360
           EDDEEEDVHLVPGSADDAPRAASVLQGSSGDSSSSSPRPAGRVIGIIKRNWHSYCGSLDP
Sbjct: 301 EDDEEEDVHLVPGSADDAPRAASVLQGSSGDSSSSSPRPAGRVIGIIKRNWHSYCGSLDP 360

Query: 361 MPMPAGSGGIAYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR 420
           MPMPAGSGGIAYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR
Sbjct: 361 MPMPAGSGGIAYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR 420

Query: 421 SIGEIGDRDTESEVVLIENDINSRPFSSQVMACLPPLPWSVSPVDIANPIRQDLRHLNVF 480
           SIGEIGDRDTESEVVLIENDINSRPFSSQVM CLPPLPWSVSPVDIANPIRQDLRHLNVF
Sbjct: 421 SIGEIGDRDTESEVVLIENDINSRPFSSQVMTCLPPLPWSVSPVDIANPIRQDLRHLNVF 480

Query: 481 SVDPPGCKDIDDALHCTALSNGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERR 540
           SVDPPGCKDIDDALHCTALSNGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERR
Sbjct: 481 SVDPPGCKDIDDALHCTALSNGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERR 540

Query: 541 IDMLPKPLTEDICSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQAR 600
           IDMLPKPLTEDICSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQAR
Sbjct: 541 IDMLPKPLTEDICSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQAR 600

Query: 601 MDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI 660
           MDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI
Sbjct: 601 MDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI 660

Query: 661 REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS 720
           REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS
Sbjct: 661 REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS 720

Query: 721 SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAARLYTHF 780
           SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAARLYTHF
Sbjct: 721 SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAARLYTHF 780

Query: 781 TSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTIADSMKY 825
           TSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTIAD++ Y
Sbjct: 781 TSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTIADNLNY 824

[Close]

BLAST of CSPI07G07820.1 vs. NCBI nr
Match: XP_008454914.1 (PREDICTED: exosome complex exonuclease RRP44 homolog A [Cucumis melo] >KAA0031280.1 exosome complex exonuclease RRP44-like protein A [Cucumis melo var. makuwa] >TYK06732.1 exosome complex exonuclease RRP44-like protein A [Cucumis melo var. makuwa])

HSP 1 Score: 1597.4 bits (4135), Expect = 0.0e+00
Identity = 809/824 (98.18%), Postives = 817/824 (99.15%), Query Frame = 0


Query: 1   MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCGASICKKCDSSVARLGASTSPILVLDTNV 60
           MLHNKSFVKKTKSG+VMKQVREHYLRDDIYCGASICKKCDSSVARLG+STSPILVLDTNV
Sbjct: 1   MLHNKSFVKKTKSGRVMKQVREHYLRDDIYCGASICKKCDSSVARLGSSTSPILVLDTNV 60

Query: 61  VLTQIDLLENPAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY 120
           VLTQIDLLENPAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY
Sbjct: 61  VLTQIDLLENPAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY 120

Query: 121 IKDMSGESKNDRNDRAIRVAAQWYQNHLGGATRVLLITNDRENRRKAIEEGIGAETIESY 180
           IKDMSGESKNDRNDRAIRVAA WYQNHLGGATRVLLITNDRENRRKAIEEGI AETIESY
Sbjct: 121 IKDMSGESKNDRNDRAIRVAALWYQNHLGGATRVLLITNDRENRRKAIEEGICAETIESY 180

Query: 181 VKSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGK 240
           V+SLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGK
Sbjct: 181 VRSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGK 240

Query: 241 LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADD 300
           LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIAD+
Sbjct: 241 LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADE 300

Query: 301 EDDEEEDVHLVPGSADDAPRAASVLQGSSGDSSSSSPRPAGRVIGIIKRNWHSYCGSLDP 360
           EDDEEEDVHLVPGS+DDAPRAAS LQGSSGDSSSSSPRPAGRVIGIIKRNWHSYCGSLDP
Sbjct: 301 EDDEEEDVHLVPGSSDDAPRAASALQGSSGDSSSSSPRPAGRVIGIIKRNWHSYCGSLDP 360

Query: 361 MPMPAGSGGIAYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR 420
           MPMPAGSGG+AYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR
Sbjct: 361 MPMPAGSGGVAYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR 420

Query: 421 SIGEIGDRDTESEVVLIENDINSRPFSSQVMACLPPLPWSVSPVDIANPIRQDLRHLNVF 480
           SIGEIGDRDTESEVVLIENDINSRPFSSQVMACLPPLPWSVSPVDIANPIRQDLRHLNVF
Sbjct: 421 SIGEIGDRDTESEVVLIENDINSRPFSSQVMACLPPLPWSVSPVDIANPIRQDLRHLNVF 480

Query: 481 SVDPPGCKDIDDALHCTALSNGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERR 540
           SVDPPGCKDIDDALHCTAL NGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERR
Sbjct: 481 SVDPPGCKDIDDALHCTALPNGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERR 540

Query: 541 IDMLPKPLTEDICSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQAR 600
           IDMLPKPLTEDICSLRADVERLAFSVIWEMT EADIVSTSYTKSIIKSSAALSYVEAQAR
Sbjct: 541 IDMLPKPLTEDICSLRADVERLAFSVIWEMTSEADIVSTSYTKSIIKSSAALSYVEAQAR 600

Query: 601 MDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI 660
           MDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI
Sbjct: 601 MDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI 660

Query: 661 REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS 720
           REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS
Sbjct: 661 REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS 720

Query: 721 SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAARLYTHF 780
           SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAA LYTHF
Sbjct: 721 SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAAPLYTHF 780

Query: 781 TSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTIADSMKY 825
           TSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTIAD++ Y
Sbjct: 781 TSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTIADNLNY 824

[Close]

BLAST of CSPI07G07820.1 vs. NCBI nr
Match: XP_038887941.1 (exosome complex exonuclease RRP44 homolog A [Benincasa hispida])

HSP 1 Score: 1590.1 bits (4116), Expect = 0.0e+00
Identity = 805/824 (97.69%), Postives = 816/824 (99.03%), Query Frame = 0


Query: 1   MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCGASICKKCDSSVARLGASTSPILVLDTNV 60
           MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCG SICKKCDSSVARL A TSPILVLDTNV
Sbjct: 1   MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCGTSICKKCDSSVARLSA-TSPILVLDTNV 60

Query: 61  VLTQIDLLENPAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY 120
           VLTQIDLLENPAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHH+DTY
Sbjct: 61  VLTQIDLLENPAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHRDTY 120

Query: 121 IKDMSGESKNDRNDRAIRVAAQWYQNHLGGATRVLLITNDRENRRKAIEEGIGAETIESY 180
           IK+MSGESKNDRNDRAIRVAAQWYQNHLGGATRVLLI+NDRENRRKAIEEGI AETIESY
Sbjct: 121 IKEMSGESKNDRNDRAIRVAAQWYQNHLGGATRVLLISNDRENRRKAIEEGICAETIESY 180

Query: 181 VKSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGK 240
           V+SLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGK
Sbjct: 181 VRSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGK 240

Query: 241 LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADD 300
           LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTI D+
Sbjct: 241 LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIVDE 300

Query: 301 EDDEEEDVHLVPGSADDAPRAASVLQGSSGDSSSSSPRPAGRVIGIIKRNWHSYCGSLDP 360
           ED+EEEDVHLVPGSADDAPRAASVLQGSSGDSSSSSPRPAGRV+GIIKRNWHSYCGSLDP
Sbjct: 301 EDEEEEDVHLVPGSADDAPRAASVLQGSSGDSSSSSPRPAGRVVGIIKRNWHSYCGSLDP 360

Query: 361 MPMPAGSGGIAYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR 420
           MPMPAGSGG+AYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR
Sbjct: 361 MPMPAGSGGVAYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR 420

Query: 421 SIGEIGDRDTESEVVLIENDINSRPFSSQVMACLPPLPWSVSPVDIANPIRQDLRHLNVF 480
           SIGEIGDRDTESEVVLIENDINSRPFSSQVMACLPPLPWSVSPVD+ANPIRQDLRHLNVF
Sbjct: 421 SIGEIGDRDTESEVVLIENDINSRPFSSQVMACLPPLPWSVSPVDVANPIRQDLRHLNVF 480

Query: 481 SVDPPGCKDIDDALHCTALSNGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERR 540
           SVDPPGCKDIDDALHCTAL NGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERR
Sbjct: 481 SVDPPGCKDIDDALHCTALPNGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERR 540

Query: 541 IDMLPKPLTEDICSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQAR 600
           IDMLPKPLTEDICSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQAR
Sbjct: 541 IDMLPKPLTEDICSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQAR 600

Query: 601 MDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI 660
           MDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI
Sbjct: 601 MDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI 660

Query: 661 REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS 720
           REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS
Sbjct: 661 REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS 720

Query: 721 SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAARLYTHF 780
           SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAA LYTHF
Sbjct: 721 SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAAPLYTHF 780

Query: 781 TSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTIADSMKY 825
           TSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTIAD++ Y
Sbjct: 781 TSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTIADNLNY 823

[Close]

BLAST of CSPI07G07820.1 vs. NCBI nr
Match: XP_022972336.1 (exosome complex exonuclease RRP44 homolog A-like [Cucurbita maxima])

HSP 1 Score: 1570.8 bits (4066), Expect = 0.0e+00
Identity = 790/824 (95.87%), Postives = 810/824 (98.30%), Query Frame = 0


Query: 1   MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCGASICKKCDSSVARLGASTSPILVLDTNV 60
           MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCG SICKKCDSSVARL ASTSPILVLDTNV
Sbjct: 1   MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCGTSICKKCDSSVARLSASTSPILVLDTNV 60

Query: 61  VLTQIDLLENPAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY 120
           VL QIDLLENPAIDDVVMLS+VLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY
Sbjct: 61  VLNQIDLLENPAIDDVVMLSIVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY 120

Query: 121 IKDMSGESKNDRNDRAIRVAAQWYQNHLGGATRVLLITNDRENRRKAIEEGIGAETIESY 180
           +K+MSGESKNDRNDRAIRVAAQWYQNH+GGATRVLLITNDRENRRKA+EEGI AETIESY
Sbjct: 121 VKEMSGESKNDRNDRAIRVAAQWYQNHIGGATRVLLITNDRENRRKAVEEGICAETIESY 180

Query: 181 VKSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGK 240
           V+SLGQTHLLDLLVQSANEDANME+VED+RPSKRKVLY EHKPMSEITSGLHRGIYHQGK
Sbjct: 181 VRSLGQTHLLDLLVQSANEDANMEEVEDMRPSKRKVLYFEHKPMSEITSGLHRGIYHQGK 240

Query: 241 LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADD 300
           LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIAD+
Sbjct: 241 LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADE 300

Query: 301 EDDEEEDVHLVPGSADDAPRAASVLQGSSGDSSSSSPRPAGRVIGIIKRNWHSYCGSLDP 360
           +DDEEEDVHLVPGSADDAPR  SV+ GS+GDS+SSSPRPAGRVIGIIKRNWHSYCGSLDP
Sbjct: 301 DDDEEEDVHLVPGSADDAPRTTSVV-GSNGDSTSSSPRPAGRVIGIIKRNWHSYCGSLDP 360

Query: 361 MPMPAGSGGIAYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR 420
           MPMPAGSGG+AYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR
Sbjct: 361 MPMPAGSGGVAYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR 420

Query: 421 SIGEIGDRDTESEVVLIENDINSRPFSSQVMACLPPLPWSVSPVDIANPIRQDLRHLNVF 480
           SIGEIGDRDTESEVVLIENDINSRPFSSQV+ACLPPLPWSVSP DIANPIRQDLRHLNVF
Sbjct: 421 SIGEIGDRDTESEVVLIENDINSRPFSSQVLACLPPLPWSVSPADIANPIRQDLRHLNVF 480

Query: 481 SVDPPGCKDIDDALHCTALSNGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERR 540
           SVDPPGCKDIDDALHCTAL NGNFEVGVHIADVTNFVHPGT LDDEAAQRGTSVYLVERR
Sbjct: 481 SVDPPGCKDIDDALHCTALPNGNFEVGVHIADVTNFVHPGTPLDDEAAQRGTSVYLVERR 540

Query: 541 IDMLPKPLTEDICSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQAR 600
           IDMLPKPLTED+CSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQAR
Sbjct: 541 IDMLPKPLTEDVCSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQAR 600

Query: 601 MDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI 660
           MDDSRLMDPITRDLRNMN LAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI
Sbjct: 601 MDDSRLMDPITRDLRNMNTLAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI 660

Query: 661 REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS 720
           REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHP+PTKEMLEPLIRTAVAVGLDLDVS
Sbjct: 661 REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPSPTKEMLEPLIRTAVAVGLDLDVS 720

Query: 721 SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAARLYTHF 780
           SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAA LYTHF
Sbjct: 721 SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAAPLYTHF 780

Query: 781 TSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTIADSMKY 825
           TSPIRRYADVIVHRLLAASLGI+KLPTLFLDRPKLTTIAD++ Y
Sbjct: 781 TSPIRRYADVIVHRLLAASLGIYKLPTLFLDRPKLTTIADNLNY 823

[Close]

BLAST of CSPI07G07820.1 vs. NCBI nr
Match: XP_023554295.1 (exosome complex exonuclease RRP44 homolog A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1570.1 bits (4064), Expect = 0.0e+00
Identity = 790/824 (95.87%), Postives = 809/824 (98.18%), Query Frame = 0


Query: 1   MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCGASICKKCDSSVARLGASTSPILVLDTNV 60
           MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCG SICKKCDSSVARL AST+PILVLDTNV
Sbjct: 1   MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCGTSICKKCDSSVARLSASTAPILVLDTNV 60

Query: 61  VLTQIDLLENPAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY 120
           VL QIDLLENPAIDDVVMLS+VLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY
Sbjct: 61  VLNQIDLLENPAIDDVVMLSIVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY 120

Query: 121 IKDMSGESKNDRNDRAIRVAAQWYQNHLGGATRVLLITNDRENRRKAIEEGIGAETIESY 180
           +K+MSGESKNDRNDRAIRVAAQWYQNH+GGATRVLLITNDRENRRKA+EEGI AETIESY
Sbjct: 121 VKEMSGESKNDRNDRAIRVAAQWYQNHIGGATRVLLITNDRENRRKAVEEGICAETIESY 180

Query: 181 VKSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGK 240
           V+SLGQTHLLDLLVQSANEDANME+VEDLRPSKRKVLY EHKPMSEITSGLHRGIYHQGK
Sbjct: 181 VRSLGQTHLLDLLVQSANEDANMEEVEDLRPSKRKVLYFEHKPMSEITSGLHRGIYHQGK 240

Query: 241 LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADD 300
           LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIAD+
Sbjct: 241 LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADE 300

Query: 301 EDDEEEDVHLVPGSADDAPRAASVLQGSSGDSSSSSPRPAGRVIGIIKRNWHSYCGSLDP 360
           +DDEEE VHLVPGSADDAPR  SV+ GS+GDS+SSSPRPAGRVIGIIKRNWHSYCGSLDP
Sbjct: 301 DDDEEEGVHLVPGSADDAPRTTSVV-GSNGDSTSSSPRPAGRVIGIIKRNWHSYCGSLDP 360

Query: 361 MPMPAGSGGIAYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR 420
           MPMPAGSGG+AYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR
Sbjct: 361 MPMPAGSGGVAYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR 420

Query: 421 SIGEIGDRDTESEVVLIENDINSRPFSSQVMACLPPLPWSVSPVDIANPIRQDLRHLNVF 480
           SIGEIGDRDTESEVVLIENDINSRPFSSQV+ACLPPLPWSVSP D+ANPIRQDLRHLNVF
Sbjct: 421 SIGEIGDRDTESEVVLIENDINSRPFSSQVLACLPPLPWSVSPADVANPIRQDLRHLNVF 480

Query: 481 SVDPPGCKDIDDALHCTALSNGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERR 540
           SVDPPGCKDIDDALHCTAL NGNFEVGVHIADVTNFVHPGT LDDEAAQRGTSVYLVERR
Sbjct: 481 SVDPPGCKDIDDALHCTALPNGNFEVGVHIADVTNFVHPGTPLDDEAAQRGTSVYLVERR 540

Query: 541 IDMLPKPLTEDICSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQAR 600
           IDMLPKPLTED+CSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQAR
Sbjct: 541 IDMLPKPLTEDVCSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQAR 600

Query: 601 MDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI 660
           MDDSRLMDPITRDLRNMN LAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI
Sbjct: 601 MDDSRLMDPITRDLRNMNTLAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI 660

Query: 661 REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS 720
           REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS
Sbjct: 661 REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS 720

Query: 721 SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAARLYTHF 780
           SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAA LYTHF
Sbjct: 721 SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAAPLYTHF 780

Query: 781 TSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTIADSMKY 825
           TSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTIAD++ Y
Sbjct: 781 TSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTIADNLNY 823

[Close]

BLAST of CSPI07G07820.1 vs. TAIR 10
Match: AT2G17510.1 (ribonuclease II family protein )

HSP 1 Score: 1303.5 bits (3372), Expect = 0.0e+00
Identity = 643/824 (78.03%), Postives = 733/824 (88.96%), Query Frame = 0


Query: 1   MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCGASICKKCDSSVARLGASTSPILVLDTNV 60
           ML +K F KKT+ G++ KQVRE YLRDDIYCGA  CK CDSS ARL  S+S I+V+DTNV
Sbjct: 1   MLQSKVFNKKTRGGRIQKQVREVYLRDDIYCGAFSCKSCDSSAARL--SSSKIIVVDTNV 60

Query: 61  VLTQIDLLENPAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY 120
           VL QIDLLEN AID VV+LSVVLDEVKN+N SVYNR+R LCSNP R+F+VFSN  HKDTY
Sbjct: 61  VLHQIDLLENKAIDTVVVLSVVLDEVKNRNRSVYNRIRLLCSNPARQFYVFSNHVHKDTY 120

Query: 121 IKDMSGESKNDRNDRAIRVAAQWYQNHLGGATRVLLITNDRENRRKAIEEGIGAETIESY 180
           ++ M  ES ND NDRAIRVA  WYQ HLG  ++VLL+TNDREN+RKA EEGI AETIE+Y
Sbjct: 121 VQAMEKESANDHNDRAIRVATLWYQKHLGDTSQVLLVTNDRENKRKATEEGISAETIEAY 180

Query: 181 VKSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGK 240
           VKSLGQ  LLDLL Q  NED  MED +D RPSKRK++Y EHKPMSEIT+GLHRGIYHQGK
Sbjct: 181 VKSLGQPELLDLLAQPTNEDITMEDADDSRPSKRKLIYQEHKPMSEITAGLHRGIYHQGK 240

Query: 241 LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADD 300
           LRVNR+NP+EAYVGSESIG+EIIIYGR+NMNRAFDGD+VAVELL RDQW +EK+L+IA++
Sbjct: 241 LRVNRFNPYEAYVGSESIGEEIIIYGRSNMNRAFDGDIVAVELLPRDQWQDEKALSIAEE 300

Query: 301 EDDEEEDVHLVPGSADDAPRAASVLQGSSGDSSSSSPRPAGRVIGIIKRNWHSYCGSLDP 360
           +D+E++ VHL P + DDAPR +++   +SGD +++  RP+GRV+G+I+RNWHSYCGSL+P
Sbjct: 301 DDEEDDTVHLAPDNVDDAPRTSNLSHETSGDKNAAPVRPSGRVVGVIRRNWHSYCGSLEP 360

Query: 361 MPMPAGSGGIAYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR 420
           M +PAGSGG A+ALFVSKDRRIPKIRI TRQL+NLLD RI+VAVDSWDR SRYPSGHYVR
Sbjct: 361 MSLPAGSGGTAHALFVSKDRRIPKIRINTRQLQNLLDMRIVVAVDSWDRQSRYPSGHYVR 420

Query: 421 SIGEIGDRDTESEVVLIENDINSRPFSSQVMACLPPLPWSVSPVDIANPIRQDLRHLNVF 480
            IG+IGD++TE+EVVLIEND++  PFSSQV+ACLPPLPWSVS  D++NP+RQDLRHL VF
Sbjct: 421 PIGKIGDKETETEVVLIENDVDYSPFSSQVLACLPPLPWSVSSEDVSNPVRQDLRHLLVF 480

Query: 481 SVDPPGCKDIDDALHCTALSNGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERR 540
           SVDPPGCKDIDDALHCT+L NGNFE+GVHIADVTNFVHPGT LDDEA++RGTSVYLVERR
Sbjct: 481 SVDPPGCKDIDDALHCTSLPNGNFELGVHIADVTNFVHPGTPLDDEASKRGTSVYLVERR 540

Query: 541 IDMLPKPLTEDICSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQAR 600
           IDMLPKPLTEDICSLRADVERLAFSVIWEM+P+A+I+ST +TKSIIKSSAALSY+EAQAR
Sbjct: 541 IDMLPKPLTEDICSLRADVERLAFSVIWEMSPDAEIISTRFTKSIIKSSAALSYIEAQAR 600

Query: 601 MDDSRLMDPITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI 660
           MDDSRL D +T DLRNMN LAK MR RRI+RGALTLASAEVKF ID E HDPL+IGMYQI
Sbjct: 601 MDDSRLTDSLTTDLRNMNTLAKIMRQRRIDRGALTLASAEVKFDIDPENHDPLNIGMYQI 660

Query: 661 REANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVS 720
            EANQMVEEFMLAANVSVA +ILK FP CSLLRRHPTPT+EMLEPL+RTA A+GL LDVS
Sbjct: 661 LEANQMVEEFMLAANVSVAGQILKLFPSCSLLRRHPTPTREMLEPLLRTAAAIGLTLDVS 720

Query: 721 SSKALADSLDRALGDDPYFNKLIRILATRCMTQAVYFYSGDLSPPEYQHYGLAARLYTHF 780
           SSKALADSLDRA+G+DPYFNKLIRILATRCMTQAVYF SGDLSPPEY HYGLAA LYTHF
Sbjct: 721 SSKALADSLDRAVGEDPYFNKLIRILATRCMTQAVYFCSGDLSPPEYHHYGLAAPLYTHF 780

Query: 781 TSPIRRYADVIVHRLLAASLGIFKLPTLFLDRPKLTTIADSMKY 825
           TSPIRRYADV VHRLLAASLGI+KLPT+F DRP+LT++AD++ Y
Sbjct: 781 TSPIRRYADVFVHRLLAASLGIYKLPTVFQDRPQLTSVADNLNY 822

[Close]

BLAST of CSPI07G07820.1 vs. TAIR 10
Match: AT2G17510.2 (ribonuclease II family protein )

HSP 1 Score: 1279.6 bits (3310), Expect = 0.0e+00
Identity = 642/858 (74.83%), Postives = 733/858 (85.43%), Query Frame = 0


Query: 1   MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCGASICKKCDSSVARLGASTSPILVLDTNV 60
           ML +K F KKT+ G++ KQVRE YLRDDIYCGA  CK CDSS ARL  S+S I+V+DTNV
Sbjct: 46  MLQSKVFNKKTRGGRIQKQVREVYLRDDIYCGAFSCKSCDSSAARL--SSSKIIVVDTNV 105

Query: 61  VLTQIDLLENPAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY 120
           VL QIDLLEN AID VV+LSVVLDEVKN+N SVYNR+R LCSNP R+F+VFSN  HKDTY
Sbjct: 106 VLHQIDLLENKAIDTVVVLSVVLDEVKNRNRSVYNRIRLLCSNPARQFYVFSNHVHKDTY 165

Query: 121 IKDMSGESKNDRNDRAIRVAAQWYQNHLGGATRVLLITNDRENRRKAIEEGIGAETIESY 180
           ++ M  ES ND NDRAIRVA  WYQ HLG  ++VLL+TNDREN+RKA EEGI AETIE+Y
Sbjct: 166 VQAMEKESANDHNDRAIRVATLWYQKHLGDTSQVLLVTNDRENKRKATEEGISAETIEAY 225

Query: 181 VKSLGQTHLLDLLVQSANEDANMEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGK 240
           VKSLGQ  LLDLL Q  NED  MED +D RPSKRK++Y EHKPMSEIT+GLHRGIYHQGK
Sbjct: 226 VKSLGQPELLDLLAQPTNEDITMEDADDSRPSKRKLIYQEHKPMSEITAGLHRGIYHQGK 285

Query: 241 LRVNRYNPFEAYVGSESIGDEIIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADD 300
           LRVNR+NP+EAYVGSESIG+EIIIYGR+NMNRAFDGD+VAVELL RDQW +EK+L+IA++
Sbjct: 286 LRVNRFNPYEAYVGSESIGEEIIIYGRSNMNRAFDGDIVAVELLPRDQWQDEKALSIAEE 345

Query: 301 EDDEEEDVHLVPGSADDAPRAASVLQGSSGDSSSSSPRPAGRVIGIIKRNWHSYCGSLDP 360
           +D+E++ VHL P + DDAPR +++   +SGD +++  RP+GRV+G+I+RNWHSYCGSL+P
Sbjct: 346 DDEEDDTVHLAPDNVDDAPRTSNLSHETSGDKNAAPVRPSGRVVGVIRRNWHSYCGSLEP 405

Query: 361 MPMPAGSGGIAYALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRLSRYPSGHYVR 420
           M +PAGSGG A+ALFVSKDRRIPKIRI TRQL+NLLD RI+VAVDSWDR SRYPSGHYVR
Sbjct: 406 MSLPAGSGGTAHALFVSKDRRIPKIRINTRQLQNLLDMRIVVAVDSWDRQSRYPSGHYVR 465

Query: 421 SIGEIGDRDTESE----------------------VVLIENDINSRPFSSQVMACLPPLP 480
            IG+IGD++TE+E                      VVLIEND++  PFSSQV+ACLPPLP
Sbjct: 466 PIGKIGDKETETEVRDHINLFDSILVGVRWARVGKVVLIENDVDYSPFSSQVLACLPPLP 525

Query: 481 WSVSPVDIANPIRQDLRHLNVFSVDPPGCKDIDDALHCTALSNGNFEVGV---------- 540
           WSVS  D++NP+RQDLRHL VFSVDPPGCKDIDDALHCT+L NGNFE+GV          
Sbjct: 526 WSVSSEDVSNPVRQDLRHLLVFSVDPPGCKDIDDALHCTSLPNGNFELGVRILESSDSHK 585

Query: 541 --HIADVTNFVHPGTALDDEAAQRGTSVYLVERRIDMLPKPLTEDICSLRADVERLAFSV 600
             +IADVTNFVHPGT LDDEA++RGTSVYLVERRIDMLPKPLTEDICSLRADVERLAFSV
Sbjct: 586 YDYIADVTNFVHPGTPLDDEASKRGTSVYLVERRIDMLPKPLTEDICSLRADVERLAFSV 645

Query: 601 IWEMTPEADIVSTSYTKSIIKSSAALSYVEAQARMDDSRLMDPITRDLRNMNALAKKMRL 660
           IWEM+P+A+I+ST +TKSIIKSSAALSY+EAQARMDDSRL D +T DLRNMN LAK MR 
Sbjct: 646 IWEMSPDAEIISTRFTKSIIKSSAALSYIEAQARMDDSRLTDSLTTDLRNMNTLAKIMRQ 705

Query: 661 RRIERGALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLAANVSVAEKILKHF 720
           RRI+RGALTLASAEVKF ID E HDPL+IGMYQI EANQMVEEFMLAANVSVA +ILK F
Sbjct: 706 RRIDRGALTLASAEVKFDIDPENHDPLNIGMYQILEANQMVEEFMLAANVSVAGQILKLF 765

Query: 721 PLCSLLRRHPTPTKEMLEPLIRTAVAVGLDLDVSSSKALADSLDRALGDDPYFNKLIRIL 780
           P CSLLRRHPTPT+EMLEPL+RTA A+GL LDVSSSKALADSLDRA+G+DPYFNKLIRIL
Sbjct: 766 PSCSLLRRHPTPTREMLEPLLRTAAAIGLTLDVSSSKALADSLDRAVGEDPYFNKLIRIL 825

Query: 781 ATRCMTQAVYFYSGDLSPPEYQHYGLAARLYTHFTSPIRRYADVIVHRLLAASLGIFKLP 825
           ATRCMTQAVYF SGDLSPPEY HYGLAA LYTHFTSPIRRYADV VHRLLAASLGI+KLP
Sbjct: 826 ATRCMTQAVYFCSGDLSPPEYHHYGLAAPLYTHFTSPIRRYADVFVHRLLAASLGIYKLP 885

[Close]

BLAST of CSPI07G07820.1 vs. TAIR 10
Match: AT1G77680.1 (Ribonuclease II/R family protein )

HSP 1 Score: 295.4 bits (755), Expect = 1.4e-79
Identity = 217/696 (31.18%), Postives = 329/696 (47.27%), Query Frame = 0


Query: 202 NMEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDE 261
           N E  + +  S ++ ++S H  +  +T  L +G   +   RVN +N  EAY   + +  +
Sbjct: 132 NGELFQQIEGSSQRKIFSSHWSLDAVTEALEKGEAFKALFRVNAHNRNEAYCKIDGVPTD 191

Query: 262 IIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIAD-----------DEDD----EEE 321
           I+I G    +RA +GD V ++L     W + K                 ++DD    ++ 
Sbjct: 192 ILINGNVCQSRAVEGDTVVIKLDPLSLWPKMKGFVTESAAKPEGTNSPPEKDDKKARQKN 251

Query: 322 DVHLVPGSADDAPRAASVLQG---SSGDSSSSSP-------------------------- 381
            + +V G  D   +  S + G    +G + SS P                          
Sbjct: 252 GIDVVEGFEDGFSKNKSSVIGKGAKNGVTPSSPPSLDSCLGSFCEQKGNCSAVDKLCGIL 311

Query: 382 ------RPAGRVIGIIKRN--------------WHSYCGSLDP--MPMPAGSGGIAYALF 441
                 RP G+V+ +++++              W  Y  S DP     P       Y   
Sbjct: 312 SSFPHKRPTGQVVAVVEKSLVRDSIVGLLDVKGWIHYKES-DPKRCKSPLSLSDDEYVQL 371

Query: 442 VSKDRRIPK-----------IRIQTRQLENLLDKRIIVA-VDSWDRLSRYPSGHYVRSIG 501
           +  D R PK           IR +   L+  L+  ++ A +  W   S +P        G
Sbjct: 372 MPADPRFPKLIVPFHVLPGSIRARLENLDPNLEAELVAAQIVDWGEGSPFPVAQITHLFG 431

Query: 502 EIGDRDTESEVVLIENDINSRPFSSQVMACLPPLPWSVSPVDIANPIRQDLRHLNVFSVD 561
              + + +   +L +N +    FS   +  LP +PW V   ++    R+DLR L V ++D
Sbjct: 432 RGSELEPQINAILYQNSVCDSDFSPGSLTSLPRVPWEVPEEEVQR--RKDLRDLCVLTID 491

Query: 562 PPGCKDIDDALHCTALSNGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERRIDM 621
           P    D+DDAL   +L  G F VGVHIADV+ FV P TALD EA  R TSVYL++R+I M
Sbjct: 492 PSTATDLDDALSVQSLPGGFFRVGVHIADVSYFVLPETALDTEARFRSTSVYLMQRKISM 551

Query: 622 LPKPLTEDICSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQARMD- 681
           LP  L+E++ SL    +RLAFS++W++  E D++     ++II+S   LSY  AQ  +D 
Sbjct: 552 LPPLLSENVGSLSPGADRLAFSILWDLNREGDVIDRWIGRTIIRSCCKLSYDHAQDIIDG 611

Query: 682 -------------DSRLMDPITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTET 741
                         S     +TR ++ ++ ++  +R +R   GAL L +++  F  D E 
Sbjct: 612 KSDVAENGWPALHGSFKWCDVTRSVKQLSEISTTLRQKRFRNGALQLENSKPVFLFD-EH 671

Query: 742 HDPLDIGMYQIREANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIRT 801
             P D      + +N +VEEFML AN++ AE I + +   SLLRRHP P    L+     
Sbjct: 672 GVPYDFVTCSRKGSNFLVEEFMLLANMTAAEVISQAYRASSLLRRHPEPNTRKLKEFEGF 731

[Close]

BLAST of CSPI07G07820.1 vs. TAIR 10
Match: AT5G02250.1 (Ribonuclease II/R family protein )

HSP 1 Score: 87.0 bits (214), Expect = 7.6e-17
Identity = 68/222 (30.63%), Postives = 110/222 (49.55%), Query Frame = 0


Query: 465 DIANPIRQDLRHLNVFSVDPPGCKDIDDALHCTALSNGNFEVGVHIADVTNFVHPGTALD 524
           DI    R DL HL V+++D     ++DDAL  T L +G  ++ +H+AD   +V PG+ +D
Sbjct: 393 DIDAVRRIDLTHLKVYAIDVDEADELDDALSATRLQDGRIKIWIHVADPARYVTPGSKVD 452

Query: 525 DEAAQRGTSVYLVERRIDMLPKPLTEDICSLRADVERLAFSVIWEMTPEADIVSTSYTKS 584
            EA +RGTSV+L      M P+ L  +  SLR      A SV   +  +  I   S   S
Sbjct: 453 REARRRGTSVFLPTATYPMFPEKLAMEGMSLRQGENCNAVSVSVVLRSDGCITEYSVDNS 512

Query: 585 IIKSSAALSYVEAQARMDDSRLMDPITRDLRNMNALAKKMRLR---RIERGALTLASAEV 644
           II+ +  L+Y  A      S L+     +   +  L++   +R   R E+GA+   + E 
Sbjct: 513 IIRPTYMLTYESA------SELLHLNLEEEAELKLLSEAAFIRSQWRREQGAVDTTTLET 572

Query: 645 KFQ-IDTETHDPLDIGMYQIREAN---QMVEEFMLAANVSVA 680
           + + ++ E  +PL I +Y   +A+   ++V E M+     VA
Sbjct: 573 RIKVVNPEDPEPL-INLYVENQADLAMRLVFEMMILCGEVVA 607

The following BLAST results are available for this feature:

BLAST of CSPI07G07820.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SHL7	0.0e+00	78.03	Exosome complex exonuclease RRP44 homolog A OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q9CSH3	4.0e-220	49.05	Exosome complex exonuclease RRP44 OS=Mus musculus OX=10090 GN=Dis3 PE=1 SV=4	[more]
Q9Y2L1	2.2e-218	48.82	Exosome complex exonuclease RRP44 OS=Homo sapiens OX=9606 GN=DIS3 PE=1 SV=2	[more]
P37202	3.1e-188	43.24	Exosome complex exonuclease dis3 OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]
Q08162	1.4e-177	41.71	Exosome complex exonuclease DIS3 OS=Saccharomyces cerevisiae (strain ATCC 204508...	[more]

BLAST of CSPI07G07820.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K821	0.0e+00	99.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G074840 PE=3 SV=1	[more]
A0A5A7SKL0	0.0e+00	98.18	Exosome complex exonuclease RRP44-like protein A OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3BZS3	0.0e+00	98.18	exosome complex exonuclease RRP44 homolog A OS=Cucumis melo OX=3656 GN=LOC103495...	[more]
A0A6J1I5P7	0.0e+00	95.87	exosome complex exonuclease RRP44 homolog A-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1GLL6	0.0e+00	95.51	exosome complex exonuclease RRP44 homolog A-like OS=Cucurbita moschata OX=3662 G...	[more]

BLAST of CSPI07G07820.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658916.2	0.0e+00	99.51	exosome complex exonuclease RRP44 homolog A [Cucumis sativus] >KAE8645869.1 hypo...	[more]
XP_008454914.1	0.0e+00	98.18	PREDICTED: exosome complex exonuclease RRP44 homolog A [Cucumis melo] >KAA003128...	[more]
XP_038887941.1	0.0e+00	97.69	exosome complex exonuclease RRP44 homolog A [Benincasa hispida]	[more]
XP_022972336.1	0.0e+00	95.87	exosome complex exonuclease RRP44 homolog A-like [Cucurbita maxima]	[more]
XP_023554295.1	0.0e+00	95.87	exosome complex exonuclease RRP44 homolog A-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI07G07820.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17510.1	0.0e+00	78.03	ribonuclease II family protein	[more]
AT2G17510.2	0.0e+00	74.83	ribonuclease II family protein	[more]
AT1G77680.1	1.4e-79	31.18	Ribonuclease II/R family protein	[more]
AT5G02250.1	7.6e-17	30.63	Ribonuclease II/R family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 828..833
None	No IPR available	GENE3D	2.40.50.700		coord: 351..426 e-value: 3.1E-28 score: 99.4
None	No IPR available	GENE3D	2.40.50.690		coord: 207..312 e-value: 5.0E-30 score: 105.6
None	No IPR available	GENE3D	3.40.50.1010		coord: 9..192 e-value: 9.3E-72 score: 242.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 325..339
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 294..340
None	No IPR available	PANTHER	PTHR23355:SF35	EXOSOME COMPLEX EXONUCLEASE RRP44	coord: 3..824
None	No IPR available	PANTHER	PTHR23355	RIBONUCLEASE	coord: 3..824
None	No IPR available	CDD	cd09862	PIN_Rrp44-like	coord: 9..180 e-value: 1.66257E-84 score: 265.223
IPR001900	Ribonuclease II/R	SMART	SM00955	RNB_2	coord: 471..802 e-value: 3.8E-137 score: 471.6
IPR001900	Ribonuclease II/R	PFAM	PF00773	RNB	coord: 471..800 e-value: 6.7E-93 score: 311.5
IPR002716	PIN domain	SMART	SM00670	PIN_9	coord: 52..165 e-value: 1.1E-19 score: 81.4
IPR002716	PIN domain	PFAM	PF13638	PIN_4	coord: 54..177 e-value: 8.4E-15 score: 55.2
IPR033771	Rrp44-like cold shock domain	PFAM	PF17216	Rrp44_CSD1	coord: 220..323 e-value: 1.7E-12 score: 47.3
IPR041505	Dis3-like cold-shock domain 2	PFAM	PF17849	OB_Dis3	coord: 372..440 e-value: 1.1E-17 score: 63.7
IPR022966	Ribonuclease II/R, conserved site	PROSITE	PS01175	RIBONUCLEASE_II	coord: 769..793
IPR029060	PIN-like domain superfamily	SUPERFAMILY	88723	PIN domain-like	coord: 54..184
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 429..824
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 215..423

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI07G07820	CSPI07G07820	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G07820.1.utr3p3	CSPI07G07820.1.utr3p3	three_prime_UTR
CSPI07G07820.1.utr3p2	CSPI07G07820.1.utr3p2	three_prime_UTR
CSPI07G07820.1.utr3p1	CSPI07G07820.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G07820.1.cds21	CSPI07G07820.1.cds21	CDS
CSPI07G07820.1.cds20	CSPI07G07820.1.cds20	CDS
CSPI07G07820.1.cds19	CSPI07G07820.1.cds19	CDS
CSPI07G07820.1.cds18	CSPI07G07820.1.cds18	CDS
CSPI07G07820.1.cds17	CSPI07G07820.1.cds17	CDS
CSPI07G07820.1.cds16	CSPI07G07820.1.cds16	CDS
CSPI07G07820.1.cds15	CSPI07G07820.1.cds15	CDS
CSPI07G07820.1.cds14	CSPI07G07820.1.cds14	CDS
CSPI07G07820.1.cds13	CSPI07G07820.1.cds13	CDS
CSPI07G07820.1.cds12	CSPI07G07820.1.cds12	CDS
CSPI07G07820.1.cds11	CSPI07G07820.1.cds11	CDS
CSPI07G07820.1.cds10	CSPI07G07820.1.cds10	CDS
CSPI07G07820.1.cds9	CSPI07G07820.1.cds9	CDS
CSPI07G07820.1.cds8	CSPI07G07820.1.cds8	CDS
CSPI07G07820.1.cds7	CSPI07G07820.1.cds7	CDS
CSPI07G07820.1.cds6	CSPI07G07820.1.cds6	CDS
CSPI07G07820.1.cds5	CSPI07G07820.1.cds5	CDS
CSPI07G07820.1.cds4	CSPI07G07820.1.cds4	CDS
CSPI07G07820.1.cds3	CSPI07G07820.1.cds3	CDS
CSPI07G07820.1.cds2	CSPI07G07820.1.cds2	CDS
CSPI07G07820.1.cds1	CSPI07G07820.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G07820.1.utr5p1	CSPI07G07820.1.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI07G07820.1	CSPI07G07820.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process	GO:0016075	rRNA catabolic process
cellular_component	GO:0000177	cytoplasmic exosome (RNase complex)
cellular_component	GO:0000176	nuclear exosome (RNase complex)
molecular_function	GO:0004540	ribonuclease activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0000175	3'-5'-exoribonuclease activity
molecular_function	GO:0004519	endonuclease activity