CSPI07G00680.1 (mRNA) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGCAGCTACCATTTCCAATTCTCTTGAGATTCATTTACCACCACCTATTACCAAAAATGGGCATCCCTTTGCTAAGAATTGCAATTCCAAAGCACTTCCCATGGCGTATTCGTCAGTTGTCGAGAACTGCAGCCGTGCCGAAAGGCCACTTGGCTATCTATGTTGGAGAGACTGAAAAGAAGAGATTTTTGGTCCCTGTTGCATATTTGGGCAATCCTTCATTCCATAACTTGTTGAGTCAAGCTGAAGAGGAGTTTGGATATGATCATCCAATGGGTGGCCTTACTTTCTCTTGTACAGAAGAGATTTTCTTCAGCCATTTGGCTAGAGACAGTTAGATTGAAAACACTATTTTTGGCCTTGATTAAAGGTCGATCGGCGGCCATCTCCTTAGATTCTTGCTAACACCACCTGACTTGATTGCCATTTTTTGAATTGACAAAGCTATGAAATTGGATGTAGAAGTATCTT CAGCAGCTACCATTTCCAATTCTCTTGAGATTCATTTACCACCACCTATTACCAAAAATGGGCATCCCTTTGCTAAGAATTGCAATTCCAAAGCACTTCCCATGGCGTATTCGTCAGTTGTCGAGAACTGCAGCCGTGCCGAAAGGCCACTTGGCTATCTATGTTGGAGAGACTGAAAAGAAGAGATTTTTGGTCCCTGTTGCATATTTGGGCAATCCTTCATTCCATAACTTGTTGAGTCAAGCTGAAGAGGAGTTTGGATATGATCATCCAATGGGTGGCCTTACTTTCTCTTGTACAGAAGAGATTTTCTTCAGCCATTTGGCTAGAGACAGTTAGATTGAAAACACTATTTTTGGCCTTGATTAAAGGTCGATCGGCGGCCATCTCCTTAGATTCTTGCTAACACCACCTGACTTGATTGCCATTTTTTGAATTGACAAAGCTATGAAATTGGATGTAGAAGTATCTT ATGGGCATCCCTTTGCTAAGAATTGCAATTCCAAAGCACTTCCCATGGCGTATTCGTCAGTTGTCGAGAACTGCAGCCGTGCCGAAAGGCCACTTGGCTATCTATGTTGGAGAGACTGAAAAGAAGAGATTTTTGGTCCCTGTTGCATATTTGGGCAATCCTTCATTCCATAACTTGTTGAGTCAAGCTGAAGAGGAGTTTGGATATGATCATCCAATGGGTGGCCTTACTTTCTCTTGTACAGAAGAGATTTTCTTCAGCCATTTGGCTAGAGACAGTTAG MGIPLLRIAIPKHFPWRIRQLSRTAAVPKGHLAIYVGETEKKRFLVPVAYLGNPSFHNLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLARDS* Homology
BLAST of CSPI07G00680.1 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 4.7e-21 Identity = 45/68 (66.18%), Postives = 57/68 (83.82%), Query Frame = 0
BLAST of CSPI07G00680.1 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 1.8e-20 Identity = 42/73 (57.53%), Postives = 56/73 (76.71%), Query Frame = 0
BLAST of CSPI07G00680.1 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 2.3e-20 Identity = 43/75 (57.33%), Postives = 57/75 (76.00%), Query Frame = 0
BLAST of CSPI07G00680.1 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 3.1e-20 Identity = 43/68 (63.24%), Postives = 55/68 (80.88%), Query Frame = 0
BLAST of CSPI07G00680.1 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 3.1e-20 Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 0
BLAST of CSPI07G00680.1 vs. ExPASy TrEMBL
Match: A0A0A0K4K5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009130 PE=3 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 6.8e-47 Identity = 91/93 (97.85%), Postives = 92/93 (98.92%), Query Frame = 0
BLAST of CSPI07G00680.1 vs. ExPASy TrEMBL
Match: A0A5D3CK22 (Auxin responsive SAUR protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001010 PE=3 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 6.6e-42 Identity = 84/93 (90.32%), Postives = 87/93 (93.55%), Query Frame = 0
BLAST of CSPI07G00680.1 vs. ExPASy TrEMBL
Match: A0A6J1C452 (indole-3-acetic acid-induced protein ARG7-like OS=Momordica charantia OX=3673 GN=LOC111007759 PE=3 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.4e-31 Identity = 71/87 (81.61%), Postives = 75/87 (86.21%), Query Frame = 0
BLAST of CSPI07G00680.1 vs. ExPASy TrEMBL
Match: A0A2P5F7Q6 (Small auxin-up RNA OS=Trema orientale OX=63057 GN=TorRG33x02_105140 PE=3 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 1.2e-22 Identity = 57/93 (61.29%), Postives = 69/93 (74.19%), Query Frame = 0
BLAST of CSPI07G00680.1 vs. ExPASy TrEMBL
Match: A0A067DUU0 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g034523mg PE=3 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.5e-22 Identity = 54/91 (59.34%), Postives = 65/91 (71.43%), Query Frame = 0
BLAST of CSPI07G00680.1 vs. NCBI nr
Match: KAE8645662.1 (hypothetical protein Csa_020396 [Cucumis sativus]) HSP 1 Score: 196.1 bits (497), Expect = 1.4e-46 Identity = 91/93 (97.85%), Postives = 92/93 (98.92%), Query Frame = 0
BLAST of CSPI07G00680.1 vs. NCBI nr
Match: KAA0049714.1 (Auxin responsive SAUR protein [Cucumis melo var. makuwa] >TYK12161.1 Auxin responsive SAUR protein [Cucumis melo var. makuwa]) HSP 1 Score: 179.5 bits (454), Expect = 1.4e-41 Identity = 84/93 (90.32%), Postives = 87/93 (93.55%), Query Frame = 0
BLAST of CSPI07G00680.1 vs. NCBI nr
Match: KAG6572091.1 (hypothetical protein SDJN03_28819, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 160.6 bits (405), Expect = 6.5e-36 Identity = 78/93 (83.87%), Postives = 80/93 (86.02%), Query Frame = 0
BLAST of CSPI07G00680.1 vs. NCBI nr
Match: XP_022135927.1 (indole-3-acetic acid-induced protein ARG7-like [Momordica charantia]) HSP 1 Score: 145.2 bits (365), Expect = 2.8e-31 Identity = 71/87 (81.61%), Postives = 75/87 (86.21%), Query Frame = 0
BLAST of CSPI07G00680.1 vs. NCBI nr
Match: PON93811.1 (Small auxin-up RNA [Trema orientale]) HSP 1 Score: 115.5 bits (288), Expect = 2.4e-22 Identity = 57/93 (61.29%), Postives = 69/93 (74.19%), Query Frame = 0
BLAST of CSPI07G00680.1 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 99.8 bits (247), Expect = 1.3e-21 Identity = 44/71 (61.97%), Postives = 54/71 (76.06%), Query Frame = 0
BLAST of CSPI07G00680.1 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 99.8 bits (247), Expect = 1.3e-21 Identity = 42/73 (57.53%), Postives = 56/73 (76.71%), Query Frame = 0
BLAST of CSPI07G00680.1 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 99.4 bits (246), Expect = 1.7e-21 Identity = 44/70 (62.86%), Postives = 54/70 (77.14%), Query Frame = 0
BLAST of CSPI07G00680.1 vs. TAIR 10
Match: AT5G18030.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 99.4 bits (246), Expect = 1.7e-21 Identity = 43/75 (57.33%), Postives = 57/75 (76.00%), Query Frame = 0
BLAST of CSPI07G00680.1 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 99.0 bits (245), Expect = 2.2e-21 Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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