CSPI06G36720.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI06G36720.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	PSI-K
Location	Chr6: 29554957 .. 29556899 (+)
Sequence length	1322
RNA-Seq Expression	CSPI06G36720.1
Synteny	CSPI06G36720.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATACGATATTGATAAGGTTTGTGCTCGATTTCAGTTGTAATTCCAAGTGGAGAAAAACAAACCTCACTGGATTTGTTCGAATAAAGACTTCCAAGTGAGGGAAGGATTACTTCCCAGAGAAACAAACATGTTCAAAAATAAAATATAAATTTAACAATTAGACGGTTTTCTAACTATCGAAGTTAATTAAAAGTTTAAATGCTTGTTGATAACAAATCATTTTACCCACCATCACCACCAAAGACCATAAAAGTCAATCAACTTCCCTTGGAGAAAAATTACTATAGACCATTTCCCAAAAACATCTTCCAATTCGCCATAGTTTCAAATCTGTGTGAGCCAGTCAGCCCAGTTCATTGGGCCTGGGAGTTTTCAGGCCCCAGCCAAGCCTGGCCCACAGACTTCTAACCCGAAACCTTATCCGTTGAAATCAATCCAATAAAACAAAGCCACGTAAGCACCCAGGATCTAAAAATGTATCCAAATCCACCAATCTGAGACCACAAGTTTAGGCTCTGTGGCTGAATGGATGTCGAATTACAAGAATCTCTCGATTTCTTCCTCTTAAATCCATTTATCCTTCAAACAAACAAACACAAAATAAAGAAAGGGAGAACAAAAAATTGTCGTAATTAGCAGCAAGAAATGGCAGCCACCACTACCATGATGACCTTCGTCCCTCAGTTTAATGGCCTCAGGCCCACTACTTCAGTACCGGTTCGCAGTCTGGTAAGTCACCCTCACCGTCGCTGCCGTTGCTGTTGCTGTCGGCTTTGAATCACCGGGAAAAGGCTGAAATGTTATTTGATTTTGCAGGTTGCGGTTCAACCGCTGAGGCGGAGGGGCGGCGGCGCTCTCAGTGCTCGTTGTGGTGATTACATTGGCTCACCTACTAACTTGGTAAACTCTCAATTTCCACTACTCCTTGCTTTCTAATTTTTTTTTCTTTTATATTCTAAAGATTTATTTTATGATCCCTCATATTTTGATTTTAGTTTTTATGTCGTGAATATTGATCGTAGAAATAGGGGATGAAATATTGGGGTAAAATCTAAAAAAAAATAATAATAATCAAAAGTTAGGACTTCGATCAATAACATGTAGAAATATGTTATGAGATCATTTTTCAAAATTAATCGTTGATATACGAAACCTAAGTTTTAAATTTGAGTATATTAACAACAAATAACAATATAACATGACCATTTTCTAAAAAAAGAAAAACAATGCAACATGATCATGTAAGAATTTGGATCTATGAAAAAAAAATGTATTACTTTTTGTGGTAAAAAGAGAAACATATTCTTGATAACCTCAGATACCTTGAACTTGTTCTGTTTGATTTCTCCCGTGGTGAATGAATTACAAACCATGTGTATACACATAAAATGACGTAAGAATTATTTGTGTAAATGTGGCAATAAAAAAAAACAGATAATGGTGATATCGACGAGCCTGATGCTGTTCGCTGGGCGGTTCGGATTGGCTCCATCGGCAAACAGGAAATCAACGGCGGGGTTGAAGCTGGAGGTGAGGGACTCTGGGCTACAGACGGGTGACCCAGCGGGCTTCACCCTCGCTGATACTTTGGCATGTGGCACTGTCGGCCACATCATTGGCGTCGGTGTTGTTCTTGGCCTTAAGGGCATTGGCTCTTTGTAAAAATATTTCTCTCTTCTTTTTTTTCTTTAGAATTAAAATACAAAGACATCTATGTTTCTGCTCTTCAATCTAATGATATGTCTTTGCCATTATTCACTTTAGTTTACATATTATTCACCTATTAATTCCACTTTTTTATATTCAAGATTATTAATTAATTTCAAACATTAATTATTTACTGAAGTAATTGAATAAATATTAAATCCTTTTAATTATGTTCGTCTTGGCAATGTAAAATTTGAGTTGGTCATATTATTCAAAATTATTGTTCATTCACCTAA

mRNA sequence

ATACGATATTGATAAGGTTTGTGCTCGATTTCAGTTGTAATTCCAAGTGGAGAAAAACAAACCTCACTGGATTTGTTCGAATAAAGACTTCCAAGTGAGGGAAGGATTACTTCCCAGAGAAACAAACATGTTCAAAAATAAAATATAAATTTAACAATTAGACGGTTTTCTAACTATCGAAGTTAATTAAAAGTTTAAATGCTTGTTGATAACAAATCATTTTACCCACCATCACCACCAAAGACCATAAAAGTCAATCAACTTCCCTTGGAGAAAAATTACTATAGACCATTTCCCAAAAACATCTTCCAATTCGCCATAGTTTCAAATCTGTGTGAGCCAGTCAGCCCAGTTCATTGGGCCTGGGAGTTTTCAGGCCCCAGCCAAGCCTGGCCCACAGACTTCTAACCCGAAACCTTATCCGTTGAAATCAATCCAATAAAACAAAGCCACGTAAGCACCCAGGATCTAAAAATGTATCCAAATCCACCAATCTGAGACCACAAGTTTAGGCTCTGTGGCTGAATGGATGTCGAATTACAAGAATCTCTCGATTTCTTCCTCTTAAATCCATTTATCCTTCAAACAAACAAACACAAAATAAAGAAAGGGAGAACAAAAAATTGTCGTAATTAGCAGCAAGAAATGGCAGCCACCACTACCATGATGACCTTCGTCCCTCAGTTTAATGGCCTCAGGCCCACTACTTCAGTACCGGTTCGCAGTCTGGTTGCGGTTCAACCGCTGAGGCGGAGGGGCGGCGGCGCTCTCAGTGCTCGTTGTGGTGATTACATTGGCTCACCTACTAACTTGATAATGGTGATATCGACGAGCCTGATGCTGTTCGCTGGGCGGTTCGGATTGGCTCCATCGGCAAACAGGAAATCAACGGCGGGGTTGAAGCTGGAGGTGAGGGACTCTGGGCTACAGACGGGTGACCCAGCGGGCTTCACCCTCGCTGATACTTTGGCATGTGGCACTGTCGGCCACATCATTGGCGTCGGTGTTGTTCTTGGCCTTAAGGGCATTGGCTCTTTGTAAAAATATTTCTCTCTTCTTTTTTTTCTTTAGAATTAAAATACAAAGACATCTATGTTTCTGCTCTTCAATCTAATGATATGTCTTTGCCATTATTCACTTTAGTTTACATATTATTCACCTATTAATTCCACTTTTTTATATTCAAGATTATTAATTAATTTCAAACATTAATTATTTACTGAAGTAATTGAATAAATATTAAATCCTTTTAATTATGTTCGTCTTGGCAATGTAAAATTTGAGTTGGTCATATTATTCAAAATTATTGTTCATTCACCTAA

Coding sequence (CDS)

ATGGCAGCCACCACTACCATGATGACCTTCGTCCCTCAGTTTAATGGCCTCAGGCCCACTACTTCAGTACCGGTTCGCAGTCTGGTTGCGGTTCAACCGCTGAGGCGGAGGGGCGGCGGCGCTCTCAGTGCTCGTTGTGGTGATTACATTGGCTCACCTACTAACTTGATAATGGTGATATCGACGAGCCTGATGCTGTTCGCTGGGCGGTTCGGATTGGCTCCATCGGCAAACAGGAAATCAACGGCGGGGTTGAAGCTGGAGGTGAGGGACTCTGGGCTACAGACGGGTGACCCAGCGGGCTTCACCCTCGCTGATACTTTGGCATGTGGCACTGTCGGCCACATCATTGGCGTCGGTGTTGTTCTTGGCCTTAAGGGCATTGGCTCTTTGTAA

Protein sequence

MAATTTMMTFVPQFNGLRPTTSVPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVGVVLGLKGIGSL*

Homology

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BLAST of CSPI06G36720.1 vs. ExPASy Swiss-Prot
Match: Q9SUI5 (Photosystem I reaction center subunit psaK, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAK PE=2 SV=2)

HSP 1 Score: 194.9 bits (494), Expect = 5.8e-49
Identity = 100/129 (77.52%), Postives = 115/129 (89.15%), Query Frame = 0


Query: 5   TTMMTFVPQFNGLRPT--TSVPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIST 64
           +TMMT +PQFNGLR T  ++ PV+ L +VQP+RR+G GAL A+C D+IGS TNLIMV ST
Sbjct: 3   STMMTTLPQFNGLRATKISAAPVQGLASVQPMRRKGNGALGAKC-DFIGSSTNLIMVTST 62

Query: 65  SLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVGVV 124
           +LMLFAGRFGLAPSANRK+TAGL+LE RDSGLQTGDPAGFTLADTLACGTVGHIIGVGVV
Sbjct: 63  TLMLFAGRFGLAPSANRKATAGLRLEARDSGLQTGDPAGFTLADTLACGTVGHIIGVGVV 122

Query: 125 LGLKGIGSL 132
           LGLK IG++
Sbjct: 123 LGLKNIGAI 130

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BLAST of CSPI06G36720.1 vs. ExPASy Swiss-Prot
Match: Q9ZT05 (Photosystem I reaction center subunit psaK, chloroplastic OS=Medicago sativa OX=3879 GN=PSAK PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 8.6e-45
Identity = 96/124 (77.42%), Postives = 107/124 (86.29%), Query Frame = 0


Query: 5   TTMMTFVPQFNGLRPTTS-VPVRSLVAVQPL-RRRGGGALSARCGDYIGSPTNLIMVIST 64
           T+MMT +PQF GLRP     P++ LVA QP+ RR+G GAL  RC D+IGS TN+IMV ST
Sbjct: 3   TSMMTTLPQFTGLRPQLKPSPIQGLVAAQPMTRRKGKGALGVRC-DFIGSSTNVIMVAST 62

Query: 65  SLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVGVV 124
           +LMLFAGRFGLAPSANRK+TAGLKLE RDSGLQTGDPAGFTLADTLACGTVGHIIGVGVV
Sbjct: 63  TLMLFAGRFGLAPSANRKATAGLKLETRDSGLQTGDPAGFTLADTLACGTVGHIIGVGVV 122

Query: 125 LGLK 127
           LGL+
Sbjct: 123 LGLR 125

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BLAST of CSPI06G36720.1 vs. ExPASy Swiss-Prot
Match: P36886 (Photosystem I reaction center subunit psaK, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSAK PE=1 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.1e-39
Identity = 93/131 (70.99%), Postives = 105/131 (80.15%), Query Frame = 0


Query: 1   MAATTTMMTFVPQFNGLRPTTSVPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVI 60
           MA+  + MT VPQF+GLR T S P RS+  +  LRRR    +  RC DYIGS TNLIMV 
Sbjct: 1   MASQLSAMTSVPQFHGLR-TYSSP-RSMATLPSLRRRRSQGI--RC-DYIGSSTNLIMVT 60

Query: 61  STSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVG 120
           +T+LMLFAGRFGLAPSANRK+TAGLKLE R+SGLQTGDPAGFTLADTLACG VGHI+GVG
Sbjct: 61  TTTLMLFAGRFGLAPSANRKATAGLKLEARESGLQTGDPAGFTLADTLACGAVGHIMGVG 120

Query: 121 VVLGLKGIGSL 132
           +VLGLK  G L
Sbjct: 121 IVLGLKNTGVL 126

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BLAST of CSPI06G36720.1 vs. ExPASy Swiss-Prot
Match: P14225 (Photosystem I reaction center subunit psaK, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=PSAK PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 6.6e-21
Identity = 53/104 (50.96%), Postives = 70/104 (67.31%), Query Frame = 0


Query: 30  AVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKL-- 89
           A++P +     ++  R   +IGS TNLIMV ST+  L A RFGLAP+  + +TAGLKL  
Sbjct: 10  AIRPTKAARRSSVVVRADGFIGSSTNLIMVASTTATLAAARFGLAPTVKKNTTAGLKLVD 69

Query: 90  EVRDSGLQTGDPAGFTLADTLACGTVGHIIGVGVVLGLKGIGSL 132
               +G+ + DPAGFT+ D LA G  GH +GVG+VLGLKGIG+L
Sbjct: 70  SKNSAGVISNDPAGFTIVDVLAMGAAGHGLGVGIVLGLKGIGAL 113

[Close]

BLAST of CSPI06G36720.1 vs. ExPASy Swiss-Prot
Match: P42051 (Photosystem I reaction center subunit psaK, chloroplastic (Fragment) OS=Cucumis sativus OX=3659 GN=PSAK PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 6.9e-10
Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 0


Query: 48 DYIGSPTNLIMVISTSLMLFAGRFGLAPSANR 80
          DYIGSPTN+IMVISTSLMLFAGRFGLAPSANR
Sbjct: 2  DYIGSPTNVIMVISTSLMLFAGRFGLAPSANR 33

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BLAST of CSPI06G36720.1 vs. ExPASy TrEMBL
Match: A0A0A0KM49 (PSI-K OS=Cucumis sativus OX=3659 GN=Csa_6G525340 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.3e-64
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MAATTTMMTFVPQFNGLRPTTSVPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVI 60
           MAATTTMMTFVPQFNGLRPTTSVPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVI
Sbjct: 1   MAATTTMMTFVPQFNGLRPTTSVPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVI 60

Query: 61  STSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVG 120
           STSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVG
Sbjct: 61  STSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVG 120

Query: 121 VVLGLKGIGSL 132
           VVLGLKGIGSL
Sbjct: 121 VVLGLKGIGSL 131

[Close]

BLAST of CSPI06G36720.1 vs. ExPASy TrEMBL
Match: A0A5A7U9C9 (PSI-K OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009450 PE=3 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 4.9e-59
Identity = 123/127 (96.85%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 6   TMMTFVPQFNGLRPTTSV-PVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSL 65
           TMMTFVPQFNGLRPT SV PVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSL
Sbjct: 4   TMMTFVPQFNGLRPTASVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSL 63

Query: 66  MLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVGVVLG 125
           MLFAGRFGLAPSANRKSTAGLKLE RDSGLQTGDPAGFTLADTLACG+VGHIIGVGVVLG
Sbjct: 64  MLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGVVLG 123

Query: 126 LKGIGSL 132
           LKGIGSL
Sbjct: 124 LKGIGSL 130

[Close]

BLAST of CSPI06G36720.1 vs. ExPASy TrEMBL
Match: A0A1S3AZR1 (PSI-K OS=Cucumis melo OX=3656 GN=LOC103484327 PE=3 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 4.9e-59
Identity = 123/127 (96.85%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 6   TMMTFVPQFNGLRPTTSV-PVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSL 65
           TMMTFVPQFNGLRPT SV PVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSL
Sbjct: 4   TMMTFVPQFNGLRPTASVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSL 63

Query: 66  MLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVGVVLG 125
           MLFAGRFGLAPSANRKSTAGLKLE RDSGLQTGDPAGFTLADTLACG+VGHIIGVGVVLG
Sbjct: 64  MLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGVVLG 123

Query: 126 LKGIGSL 132
           LKGIGSL
Sbjct: 124 LKGIGSL 130

[Close]

BLAST of CSPI06G36720.1 vs. ExPASy TrEMBL
Match: A0A6J1CZY3 (PSI-K OS=Momordica charantia OX=3673 GN=LOC111015785 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.0e-57
Identity = 120/128 (93.75%), Postives = 124/128 (96.88%), Query Frame = 0


Query: 5   TTMMTFVPQFNGLRPTTSV-PVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTS 64
           TTMMT +PQF+GL+PT SV PVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTS
Sbjct: 3   TTMMTSIPQFSGLKPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTS 62

Query: 65  LMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVGVVL 124
           LMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACG+VGHIIGVGVVL
Sbjct: 63  LMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGSVGHIIGVGVVL 122

Query: 125 GLKGIGSL 132
           GLK IGSL
Sbjct: 123 GLKSIGSL 130

[Close]

BLAST of CSPI06G36720.1 vs. ExPASy TrEMBL
Match: A0A6J1IQ95 (PSI-K OS=Cucurbita maxima OX=3661 GN=LOC111477837 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.0e-56
Identity = 119/128 (92.97%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 5   TTMMTFVPQFNGLRPTTSV-PVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTS 64
           TTMMT +PQF GLRPT SV PVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTS
Sbjct: 3   TTMMTSIPQFTGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTS 62

Query: 65  LMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVGVVL 124
           LMLFAGRFGLAPSANRKSTAGLKLE R+SGLQTGDPAGFTLADTLACG+VGHIIGVGVVL
Sbjct: 63  LMLFAGRFGLAPSANRKSTAGLKLEARESGLQTGDPAGFTLADTLACGSVGHIIGVGVVL 122

Query: 125 GLKGIGSL 132
           GLK IGSL
Sbjct: 123 GLKSIGSL 130

[Close]

BLAST of CSPI06G36720.1 vs. NCBI nr
Match: XP_004134641.1 (photosystem I reaction center subunit psaK, chloroplastic [Cucumis sativus] >KGN49447.1 hypothetical protein Csa_002715 [Cucumis sativus])

HSP 1 Score: 254.6 bits (649), Expect = 4.7e-64
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MAATTTMMTFVPQFNGLRPTTSVPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVI 60
           MAATTTMMTFVPQFNGLRPTTSVPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVI
Sbjct: 1   MAATTTMMTFVPQFNGLRPTTSVPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVI 60

Query: 61  STSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVG 120
           STSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVG
Sbjct: 61  STSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVG 120

Query: 121 VVLGLKGIGSL 132
           VVLGLKGIGSL
Sbjct: 121 VVLGLKGIGSL 131

[Close]

BLAST of CSPI06G36720.1 vs. NCBI nr
Match: XP_008439573.1 (PREDICTED: photosystem I reaction center subunit psaK, chloroplastic [Cucumis melo] >KAA0052503.1 photosystem I reaction center subunit psaK [Cucumis melo var. makuwa] >TYK13321.1 photosystem I reaction center subunit psaK [Cucumis melo var. makuwa])

HSP 1 Score: 236.9 bits (603), Expect = 1.0e-58
Identity = 123/127 (96.85%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 6   TMMTFVPQFNGLRPTTSV-PVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSL 65
           TMMTFVPQFNGLRPT SV PVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSL
Sbjct: 4   TMMTFVPQFNGLRPTASVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSL 63

Query: 66  MLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVGVVLG 125
           MLFAGRFGLAPSANRKSTAGLKLE RDSGLQTGDPAGFTLADTLACG+VGHIIGVGVVLG
Sbjct: 64  MLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGVVLG 123

Query: 126 LKGIGSL 132
           LKGIGSL
Sbjct: 124 LKGIGSL 130

[Close]

BLAST of CSPI06G36720.1 vs. NCBI nr
Match: XP_038883621.1 (photosystem I reaction center subunit psaK, chloroplastic [Benincasa hispida])

HSP 1 Score: 231.5 bits (589), Expect = 4.2e-57
Identity = 120/127 (94.49%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 6   TMMTFVPQFNGLRPTTSV-PVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSL 65
           TMMT +PQFNGLRPT S+ PVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSL
Sbjct: 4   TMMTSIPQFNGLRPTVSMAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSL 63

Query: 66  MLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVGVVLG 125
           MLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACG+VGHIIGVGVVLG
Sbjct: 64  MLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGSVGHIIGVGVVLG 123

Query: 126 LKGIGSL 132
           LK IGSL
Sbjct: 124 LKSIGSL 130

[Close]

BLAST of CSPI06G36720.1 vs. NCBI nr
Match: XP_022146631.1 (photosystem I reaction center subunit psaK, chloroplastic [Momordica charantia])

HSP 1 Score: 231.5 bits (589), Expect = 4.2e-57
Identity = 120/128 (93.75%), Postives = 124/128 (96.88%), Query Frame = 0


Query: 5   TTMMTFVPQFNGLRPTTSV-PVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTS 64
           TTMMT +PQF+GL+PT SV PVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTS
Sbjct: 3   TTMMTSIPQFSGLKPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTS 62

Query: 65  LMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVGVVL 124
           LMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACG+VGHIIGVGVVL
Sbjct: 63  LMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGSVGHIIGVGVVL 122

Query: 125 GLKGIGSL 132
           GLK IGSL
Sbjct: 123 GLKSIGSL 130

[Close]

BLAST of CSPI06G36720.1 vs. NCBI nr
Match: XP_023543618.1 (photosystem I reaction center subunit psaK, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 230.7 bits (587), Expect = 7.2e-57
Identity = 120/128 (93.75%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 5   TTMMTFVPQFNGLRPTTSV-PVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTS 64
           TTMMT +PQF GLRPT SV PVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTS
Sbjct: 3   TTMMTSIPQFTGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTS 62

Query: 65  LMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVGVVL 124
           LMLFAGRFGLAPSANRKSTAGLKLE RDSGLQTGDPAGFTLADTLACG+VGHIIGVGVVL
Sbjct: 63  LMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGVVL 122

Query: 125 GLKGIGSL 132
           GLK IGSL
Sbjct: 123 GLKSIGSL 130

[Close]

BLAST of CSPI06G36720.1 vs. TAIR 10
Match: AT1G30380.1 (photosystem I subunit K )

HSP 1 Score: 194.9 bits (494), Expect = 4.1e-50
Identity = 100/129 (77.52%), Postives = 115/129 (89.15%), Query Frame = 0


Query: 5   TTMMTFVPQFNGLRPT--TSVPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIST 64
           +TMMT +PQFNGLR T  ++ PV+ L +VQP+RR+G GAL A+C D+IGS TNLIMV ST
Sbjct: 3   STMMTTLPQFNGLRATKISAAPVQGLASVQPMRRKGNGALGAKC-DFIGSSTNLIMVTST 62

Query: 65  SLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVGVV 124
           +LMLFAGRFGLAPSANRK+TAGL+LE RDSGLQTGDPAGFTLADTLACGTVGHIIGVGVV
Sbjct: 63  TLMLFAGRFGLAPSANRKATAGLRLEARDSGLQTGDPAGFTLADTLACGTVGHIIGVGVV 122

Query: 125 LGLKGIGSL 132
           LGLK IG++
Sbjct: 123 LGLKNIGAI 130

The following BLAST results are available for this feature:

BLAST of CSPI06G36720.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SUI5	5.8e-49	77.52	Photosystem I reaction center subunit psaK, chloroplastic OS=Arabidopsis thalian...	[more]
Q9ZT05	8.6e-45	77.42	Photosystem I reaction center subunit psaK, chloroplastic OS=Medicago sativa OX=...	[more]
P36886	1.1e-39	70.99	Photosystem I reaction center subunit psaK, chloroplastic OS=Hordeum vulgare OX=...	[more]
P14225	6.6e-21	50.96	Photosystem I reaction center subunit psaK, chloroplastic OS=Chlamydomonas reinh...	[more]
P42051	6.9e-10	96.88	Photosystem I reaction center subunit psaK, chloroplastic (Fragment) OS=Cucumis ...	[more]

BLAST of CSPI06G36720.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KM49	2.3e-64	100.00	PSI-K OS=Cucumis sativus OX=3659 GN=Csa_6G525340 PE=3 SV=1	[more]
A0A5A7U9C9	4.9e-59	96.85	PSI-K OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009450 PE=3 SV...	[more]
A0A1S3AZR1	4.9e-59	96.85	PSI-K OS=Cucumis melo OX=3656 GN=LOC103484327 PE=3 SV=1	[more]
A0A6J1CZY3	2.0e-57	93.75	PSI-K OS=Momordica charantia OX=3673 GN=LOC111015785 PE=3 SV=1	[more]
A0A6J1IQ95	1.0e-56	92.97	PSI-K OS=Cucurbita maxima OX=3661 GN=LOC111477837 PE=3 SV=1	[more]

BLAST of CSPI06G36720.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134641.1	4.7e-64	100.00	photosystem I reaction center subunit psaK, chloroplastic [Cucumis sativus] >KGN...	[more]
XP_008439573.1	1.0e-58	96.85	PREDICTED: photosystem I reaction center subunit psaK, chloroplastic [Cucumis me...	[more]
XP_038883621.1	4.2e-57	94.49	photosystem I reaction center subunit psaK, chloroplastic [Benincasa hispida]	[more]
XP_022146631.1	4.2e-57	93.75	photosystem I reaction center subunit psaK, chloroplastic [Momordica charantia]	[more]
XP_023543618.1	7.2e-57	93.75	photosystem I reaction center subunit psaK, chloroplastic [Cucurbita pepo subsp....	[more]

BLAST of CSPI06G36720.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30380.1	4.1e-50	77.52	photosystem I subunit K	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000549	Photosystem I PsaG/PsaK protein	PFAM	PF01241	PSI_PSAK	coord: 54..129 e-value: 2.1E-18 score: 66.1
IPR000549	Photosystem I PsaG/PsaK protein	PROSITE	PS01026	PHOTOSYSTEM_I_PSAGK	coord: 101..118
IPR023618	Photosystem I PsaG/PsaK domain, chloroplastic	GENE3D	1.10.286.40		coord: 48..131 e-value: 4.9E-39 score: 134.4
IPR017493	Photosystem I reaction centre subunit PsaK, chloroplastic	TIGRFAM	TIGR03050	TIGR03050	coord: 49..131 e-value: 1.3E-46 score: 154.8
None	No IPR available	PANTHER	PTHR34195:SF2	PHOTOSYSTEM I REACTION CENTER SUBUNIT PSAK, CHLOROPLASTIC	coord: 1..131
IPR016370	Photosystem I PsaG/PsaK, plant	PANTHER	PTHR34195	PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLASTIC-RELATED	coord: 1..131
IPR035982	Photosystem I reaction centre subunit PsaK superfamily	SUPERFAMILY	81563	Photosystem I reaction center subunit X, PsaK	coord: 99..125

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI06G36720	CSPI06G36720	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G36720.1.utr5p1	CSPI06G36720.1.utr5p1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G36720.1.cds1	CSPI06G36720.1.cds1	CDS
CSPI06G36720.1.cds2	CSPI06G36720.1.cds2	CDS
CSPI06G36720.1.cds3	CSPI06G36720.1.cds3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G36720.1.utr3p1	CSPI06G36720.1.utr3p1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI06G36720.1	CSPI06G36720.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0016020	membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane