CSPI06G21050.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI06G21050.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	centromere protein V-like
Location	Chr6: 19105862 .. 19112385 (-)
Sequence length	1059
RNA-Seq Expression	CSPI06G21050.1
Synteny	CSPI06G21050.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCATCGGTCGGCGCCGGTTCCCTGATTCACGGTTACGAACGCCCGTCGGCCACTGAGGTTGAGGTTCGTTTGCTCTTCTTTCCTTCATCTTCGACTTTTTCTCAATCCAAAATTTGTTTCTGCAGTCCTCCTCCTCCTCCTCTCCCATCTCATTTTTCGTTTTGTTCTCTATTTCTCATGGATCCAAACACCCCTTGGATTTCTAGTAATTTGATTACATTCCAGCTTGAGATATTCTCTTTTTCAAAATCTTTGATATATTGATATGTGATTCAGTTTATATTTGTTAAATTCTGTTTAAGCTGGCTTTTGAATTACAACTTGTTGTTTTAAGCTCCATCCAAGTTGATTTAAACCAATTGTATACCTATTACCTAGGTACTCATCAAACTTGTGTAACTTCTATTTCATCGAAACTTCTTTCTTGCTATGAAGTTAGACTATATTTCTAACTTTTACTTTGAAGAAACCGTTATGAGGAAGTGATGATGGAATGTTCTTCCCCATTCACCCACTATAACTTTTAGAATCTCCCTACCTTGTTTTGTAAACTTCATACATCAATAAAGTTTGTTTCTTATACAAGATAATACACACACACACCTTCTCAAGTTGTAGCCAAACCAAAAAATGGGAGGGTACCGCATTGGGCAGAAGGCGATCCAAAAGTCAAAGGCTCACACTTATTATTAATATTCACTCTAAAAGAAGGAAGGATCTTTGGCATAAAGTACCTTCTTATTAGAGAAAGGGCAACTTAATAATAAGAAAAGAGGGGGTGAGGTAGGCGACAGGTAGCTTGCTTCCAAGCTGGCCCATTAGGATTCTATTAGTATGAAGAGCCGAAAACATTACCACCATCAACGGTTGATGATATTAAAACCCAGACCTGTTACTAATGTACTGACCCCCCAACACCAGCCAACTATAAGAGCAGATTGGCGAACTGGGTGATCTTTTGCCTAAACCTCATAGGAAGAAGACAGCATTTTAGGACTCAGTCCGTTGTTCTAGTGATAGGGACTGTCTTAAGTTGGTTTGGGTTAAAAGCTTGTTAGAATACTGATTTCAATACATTCCTTCCTTCTATTTTCACTGATTTCCAGTGAAGGTTCCTTTTTTCATTATCTTCTTGGTTACTAAACTTACTAGCATTTTCCCTCCCTTTTTCTTTAAGTCATTTATATGTGAGGTTCTACAACATGTTAATAATTGTACTGGGTTAATCTTACAGACCCTAAGCTAAGTTCAAAAAACTTCTACTTCAAGGCTTAGTTCAAAAGAGATCTTGAAACTCCAGTTGAGGTATTCCTATCAAGGTCATGGGACTAAAATTTGAGATGTGAAAGAAAGTTACTTATATTGTTGGAGTAGCAATGAGGTTACTTGTAGAAATCGAAGGTTACCTTGAGAAAAGATCATGAGGAGCATATCATTCAATTGACGTTCTTTCCTTTTCTCATACGATATTGTAGTAACATGATTGCCACAACCCACTTTAAATTTGTTTTGAGTCTTTCTTTTACGAATACCAGTTAAGGTGGTTTGTAGGTCTCTGAAGAAGAGTTTTTAATAGAGGAATATAAGAGTGTGGATCTACTTTTTTCTAAGTTCAATCTCTAGTTAATTTTGGCCTCGATGAAGATAGATTAATAGAACTGTTTGTTGTAAATTGGTTCCTTTGAAACTCAATTCTAATCATTTCAAACTTGCATTCTACTTTTGCCAAGCTATTCTAGGGCAGTAAGTGCTCTTAAATGGTCAAGTTTCTGTTATGATCCATAGCCTACACGAAGTTATACTCAATTTTGACCTAGATTTTTTATTATGTGGAAAGGATGTGTAAAATATGAATATTCTATTCGTTTAATTTAATTTTGCCACTAATTTTTGGATTTTCAATCGTGATCTCCGTTTTCAAAGACATGGAAAACTGGCTTCTAATAGTGCTTTTGATCTCCACTCAAAAGTTAGATTTTGATGAAAAGGGTGATACTAGGATCTTTCTTTCATCTCTATGATTAGAAAGAAACAATAGGATCTTCAATCATGTCTGAACTGTTGGCTAATTGCACATATATTGACCTCAAATTAGAATGTCATCCAAACGGATTTCAGTAATTATGACAGATTTTTTATTTACTCAGACTGGAAGCGTTCTTATTTCCCTTTTAAATGATAAGGTCCTCTTCCCTTTGATGTTTTGGCTGTATTCTCAATTGTTATCTCTTGTCAAAAAGTAAATAATTGAAAAATAGAAAGATAATATGATATGATTCATAATTGGATCAATTTGAAACATGGACCAACTTTCTTTTCTGTTTTAGTTTACTAGGTCTATACCTTTTACTCAGGAAAACGAATAATCATTCACTAAAAGGATTGGAAGGTTTGATTCCTTTTCAATGGCTTCTGAGTTGGTTGTACATCATGGTGGATGTCACTGCAAGAAAGTAAGATGGCGAGTTGAAGCACCTGCCAGTGTTGTTGCTTGGGATTGCAACTGTTCCAACTGCTTCATGAGGGCCAATACACATTTTATTGTACCTTTGGAACGGTTCAAGCTTTTAGGAGATTCTAGCAACTTTGTTTCTACCTACACATTTGGTTCTCACACTGCAAAACATACCTTCTGCAAAAACTGCGGCATTACCTCATTTTACCATCCACGCTCAAATCCAGATGGAGTTGCTATTACTTTCAAATGTGTTGATCCTGGAACTTTGACCCATATTGAGGTTAGGCAGTTTGATGGGAGCAACTGGGAGGCCTCTTATGATCAAACAGGCATTGCTTCATTGTCAAAGTTGAACATAAGTTAGTATGCATTTTGACAACTGCTGTAAACTAAATTTATGACCGTTGATGATTGATACAAACTTTTTTTATATGGCTTCCATCAACGATTGATATGGCTGCTTGAAAAGGTTTGTTGCTCGGACAACCCCTTCACGTGCAAACTTCCCCTTGCCGCTCGCTCTTTCCATTGTCGATCAGGATTTCCCATTACTGATAAAAATAGGTGCTACGTCTGGTCGGTAGTGTTTGGGTCGAGCAAGGTAGGAAAGGAGGTGATGTTTTCTCTATTGTTTTCCAATGCCGATGATGAGATCTCCATTTTCATAGTTTTTCTTATTCATGATCATACTTTATTCTACCAAATATGTTTTTTTAATTAGTTGTGAATCTGTATTTTGCTATTTATGTTCATGTTTGATGCTGCTGTCTATATCCAATTTGCCTACCCATAGCTTATGCCATTACTCCTACTGTGTGTATATCGTGAATACTTATGTACTTTCCATTGCAATATGCTTCTGTATATTTTTTTTACCTAAGCTTCTGATGCTTCTGTCCCCCCCCCCCCCCCCCCCCCTTTTTTTGTAAGTACACATCATGTGCATTATGTGGTAGGCATGTTGCATTTGAACTTTGACCCACTTTTCTTTACCCATTTGTTGTATGTCGTCTTTCCCATTGTCATCAGTCCATGCTCAGGTTTGCTTGTTTAGGGGTCTTCAATGTCATTACTTCTTCCATTTCCCATCTATATATACTTGCTATGCCATTGCATAGTAACTCTTGGTTCTCCCTTTGTTTGGTAATGTATATGCATCCATCTGTTTGTGTTCCATTGTGTGTTTGGTCTTCACAGTCTACCTATGCACTTGTCATTGATTGATGTTGCGATCCATGCTATGCCACTTGTTGTTTATTTCCATGCCTTTCATGTCACCACTTGCATACTACGACCCGGTTCCATTTTTGTTGTCCATTCACATGTCCTTCATATCTCCACATTTGAGGTTTGTGTTCCATTGTTGTTGTTCATTTCCATGATTTTCATATCACCACATATTGAGGCTCGTGTTCCATTGTTGCTGTTCATTTTCCATGCCTTTCATATCACCACATTTGATACTGTTACATTTTTGTAGCTTTTTTTCCATTTTCTTTGTTCATGTGCACGCCTTTCATATCTTCACATTTCCTAGCATTGCATATGTGAAGACATTTGTTTCACTCCATGAAGTTCAATTTCAAATTATTGAACAAATTTCCTTCCTCTAAGGCACTCAAAATTTTCACATTGTTCACGTTTTTTTTTTGACGTAATTGTTGATTGTTTGTTCATTTGTCCTTCGTATGTCTTTGGGAAAGATCGCACAACGGGCGCACGTGCAGAGACATTTGATGTAGAACATCCTCTTTTCTTGATGTTTCTTTAAGTTCTTTAGTATTTCTTGAGCTAATTCTTGAGTATCTTGAATTGTCATTCTTGTATTTTAGGATTAGTCATCTTTAGTTAAGGCTTGTGTATCTTGAGTTAGTTATAAATAAACTAACTCAACTCCAAGTTAGTTAAGTTCTAAAATAACTAACTTCTAACAACTCTTGTAAACTTCCCGCCTATAAAAAGGCTTTTCCTCTCATTAATAAATCAATCATCTGAAGTATATGGAAACAACTTACTTGAACATTAATAGACGATTCTGATTCTTCTGATGAAGAGAACTTGTTGAACATTCATCAAGAACCACAACAAAGGTTCCCTATCCCTCGTTTATTTGACCTACTTGACCAACTAGGTAAGGCTTCCATCTTTTCCAAAGTAGATCTTAAGAGTGGCTACCACTAAATTAGAATTAAACCAGGATGAGTGGAAAACAACCTTCAAAACTAATGAAGGATTGTTTGAATAGTTAGTTATGCCTTTTGGTCTCTTAAATGCCCTTAGCACCTTTGTGAGATTAATGAATCAAATCCTACAAACTTTTTTGAATCAATTCATTGTGGTATACTTTGATGACATATTCATCTATAGCTCCTCTAAGGAAGATCACCTAAAACACATTCAGTTACTTTTTACAACCTTACAAGAAAATGAATTACAAATTAACCTTAAAAAAATGTGAATTTTTGTGCTATAGCATTCATTTTCTTGGATTTATCATAAGTTTTAATGACATTTTTGTTGATCCTAAAAAGATTCACTCTATTAGTTATTGGCCACAACCAAAGACTCCAAAAGATATTCAATGTTTTTTTAGGTTTAGCCACTTTTTATAGAAGGTTCATAAAGAACTTTAGCACTATTGTAGCACCTTTAACAAACTGTTTAAAGAAAGGTAATTTTCAATGAGGACAAATTGAAGAAGACAACTTCTATCAATTGAAATTAGCTTTAACTAGCCCCTTGTTTTAAAACTATCGAACTTTGGTAAACCATTCACAGTAGATGCTTCAGGTCTAGGAATAGGAGTTGTCCTTAGTCAAGAAGGTCACCCTTTAGAGTATTTTAGTGAAAAATTAAGTACTTTTAGACAAAATTTGAGTACCTATGAACATGAACTATATGTCCTTGTGAGTGCTTTAAAACAATAGGAATATTATCTACTTGCTAATAATTTTATCTTGCTTACTGACCTCTTTTCTCTTAAATTTCTGAATTCCCAAAAAATAATTAGTAGAATGTATGCTCGATGACTGCAATTCTTGCAAAGATTTGATTTTGTGATCAAAATACTTCGGGTAAGATTAATAAGGCTACTAATGCCCTCAGTCGAAAAGGTATACTTCTCACCACCCTTCAATCTCAAATCATTGCCTTTGATCACATACCTACATTGTACCCTTCGGACACTAATTTTAAAAGTATTTGGAAAGCTTGCTCTAACCATAAACCTTGCAAGACTACCTGCATGTCATCATTCCAAAATGACCAACAAGAGAATGGGTCAATTTCAAACATTAGAAAGACTCGGCTCCAACGCTTACCGAGTAGATCTTCCAGCAAACATGAGAATCAACCCATCTTTAAATATTGTTTACTTGTCACCTTACTATGCACCAGATTCCTTCTCTTTAGCTCCCTAATTCTCACTCGAGGTCGAGTTTTATCCTAGGGGAGGGGTTTGATGTTGAACATCCTCATTTCTTGATGTTTCTTTGAGTTCTTTAGTATTTCTTTAGCTAATTCTTGAGTATCTTGAATTACGATTCTTGTATTTTAGGATTAGTTATCTTTAGTAAGGCGTGTATCTTGAGTTACTAATCTTGTATCTTGAGTTAGTTTAACTTGGGGTTGTTCTAAAATAACTAACTTCTAACAATTCTTGTAAACTTTCCGTCTATAAAAGGGCTTCTCCTCTCATTAATAAATCACTAATAAATCATCATCTGAAGTATTATTCATAATATTTGCTAAACTTTGCATTACTACATCACATTAGCTGATGTCGGGTCCAATGTGTCGGTTGAAAACGAGGGATTTCATCCGAAAGATGGGATCGATAAGGAGTTCCTTACTATGTATAGTAAGAGAATGAACATGTCGCCTGAAGACATGATGGACGCATGACCTGGTAGGTCCAGCGACTGTAGGTCGAGTTTCAATGGATTGGAGAGGAAGCGCGGAGGGTAGACTGTCGAGACTGTGGAGGTGGATTGTGCGAATGAACAGCTGAGGGCCATTGCAGACTGGTTGAAGATAACTAGCCAAGAGGAAGACGTTGTGCGGGG

mRNA sequence

CTTCATCGGTCGGCGCCGGTTCCCTGATTCACGGTTACGAACGCCCGTCGGCCACTGAGGTTGAGGAAAACGAATAATCATTCACTAAAAGGATTGGAAGGTTTGATTCCTTTTCAATGGCTTCTGAGTTGGTTGTACATCATGGTGGATGTCACTGCAAGAAAGTAAGATGGCGAGTTGAAGCACCTGCCAGTGTTGTTGCTTGGGATTGCAACTGTTCCAACTGCTTCATGAGGGCCAATACACATTTTATTGTACCTTTGGAACGGTTCAAGCTTTTAGGAGATTCTAGCAACTTTGTTTCTACCTACACATTTGGTTCTCACACTGCAAAACATACCTTCTGCAAAAACTGCGGCATTACCTCATTTTACCATCCACGCTCAAATCCAGATGGAGTTGCTATTACTTTCAAATGTGTTGATCCTGGAACTTTGACCCATATTGAGGTTAGGCAGTTTGATGGGAGCAACTGGGAGGCCTCTTATGATCAAACAGGCATTGCTTCATTGTCAAAGTTGAACATAAGTTAGTATGCATTTTGACAACTGCTGTAAACTAAATTTATGACCGTTGATGATTGATACAAACTTTTTTTATATGGCTTCCATCAACGATTGATATGGCTGCTTGAAAAGGTTTGTTGCTCGGACAACCCCTTCACGTGCAAACTTCCCCTTGCCGCTCGCTCTTTCCATTGTCGATCAGGATTTCCCATTACTGATAAAAATAGGTGCTACGTCTGGTCGGTAGTGTTTGGGTCGAGCAAGCTGATGTCGGGTCCAATGTGTCGGTTGAAAACGAGGGATTTCATCCGAAAGATGGGATCGATAAGGAGTTCCTTACTATGTATAGTAAGAGAATGAACATGTCGCCTGAAGACATGATGGACGCATGACCTGGTAGGTCCAGCGACTGTAGGTCGAGTTTCAATGGATTGGAGAGGAAGCGCGGAGGGTAGACTGTCGAGACTGTGGAGGTGGATTGTGCGAATGAACAGCTGAGGGCCATTGCAGACTGGTTGAAGATAACTAGCCAAGAGGAAGACGTTGTGCGGGG

Coding sequence (CDS)

ATGGCTTCTGAGTTGGTTGTACATCATGGTGGATGTCACTGCAAGAAAGTAAGATGGCGAGTTGAAGCACCTGCCAGTGTTGTTGCTTGGGATTGCAACTGTTCCAACTGCTTCATGAGGGCCAATACACATTTTATTGTACCTTTGGAACGGTTCAAGCTTTTAGGAGATTCTAGCAACTTTGTTTCTACCTACACATTTGGTTCTCACACTGCAAAACATACCTTCTGCAAAAACTGCGGCATTACCTCATTTTACCATCCACGCTCAAATCCAGATGGAGTTGCTATTACTTTCAAATGTGTTGATCCTGGAACTTTGACCCATATTGAGGTTAGGCAGTTTGATGGGAGCAACTGGGAGGCCTCTTATGATCAAACAGGCATTGCTTCATTGTCAAAGTTGAACATAAGTTAG

Protein sequence

MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNWEASYDQTGIASLSKLNIS*

Homology

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BLAST of CSPI06G21050.1 vs. ExPASy Swiss-Prot
Match: Q9CXS4 (Centromere protein V OS=Mus musculus OX=10090 GN=Cenpv PE=1 SV=2)

HSP 1 Score: 142.5 bits (358), Expect = 3.6e-33
Identity = 66/131 (50.38%), Postives = 86/131 (65.65%), Query Frame = 0


Query: 5   LVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVST 64
           LV H GGCHC  VR+ V A A +  +DCNCS C  + N HFIVP  RFKLL  + + ++T
Sbjct: 122 LVKHTGGCHCGAVRFEVWASADLHIFDCNCSICKKKQNRHFIVPASRFKLLKGAES-ITT 181

Query: 65  YTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNWE-AS 124
           YTF +H A+HTFCK CG+ SFY PRSNP G  I   C+D GT+  +   +F+GS+WE A 
Sbjct: 182 YTFNTHKAQHTFCKRCGVQSFYTPRSNPGGFGIAPHCLDEGTVRSVVTEEFNGSDWERAM 241

Query: 125 YDQTGIASLSK 135
            +   I ++SK
Sbjct: 242 KEHKTIKNMSK 251

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BLAST of CSPI06G21050.1 vs. ExPASy Swiss-Prot
Match: Q7Z7K6 (Centromere protein V OS=Homo sapiens OX=9606 GN=CENPV PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 8.0e-33
Identity = 66/131 (50.38%), Postives = 85/131 (64.89%), Query Frame = 0


Query: 5   LVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVST 64
           LV H GGCHC  VR+ V A A +  +DCNCS C  + N HFIVP  RFKLL   +  ++T
Sbjct: 145 LVKHTGGCHCGAVRFEVWASADLHIFDCNCSICKKKQNRHFIVPASRFKLL-KGAEHITT 204

Query: 65  YTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNWE-AS 124
           YTF +H A+HTFCK CG+ SFY PRSNP G  I   C+D GT+  +   +F+GS+WE A 
Sbjct: 205 YTFNTHKAQHTFCKRCGVQSFYTPRSNPGGFGIAPHCLDEGTVRSMVTEEFNGSDWEKAM 264

Query: 125 YDQTGIASLSK 135
            +   I ++SK
Sbjct: 265 KEHKTIKNMSK 274

[Close]

BLAST of CSPI06G21050.1 vs. ExPASy Swiss-Prot
Match: A0A0U1RR11 (Centromere protein V-like protein 1 OS=Homo sapiens OX=9606 GN=CENPVL1 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 7.7e-20
Identity = 45/115 (39.13%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 5   LVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVST 64
           LV H GGCHC  VR+ V APA +   DC+C  C  + + HF+VP  RF LL  + + V T
Sbjct: 130 LVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLLQGAESIV-T 189

Query: 65  YTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSN 120
           Y   +H A H+FC  CG+ SF+   S+P    +   C+D GT+  + + +  G +
Sbjct: 190 YRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVIEEVGGGD 243

[Close]

BLAST of CSPI06G21050.1 vs. ExPASy Swiss-Prot
Match: P0DPI3 (Centromere protein V-like protein 2 OS=Homo sapiens OX=9606 GN=CENPVL2 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 7.7e-20
Identity = 45/115 (39.13%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 5   LVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVST 64
           LV H GGCHC  VR+ V APA +   DC+C  C  + + HF+VP  RF LL  + + V T
Sbjct: 130 LVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLLQGAESIV-T 189

Query: 65  YTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSN 120
           Y   +H A H+FC  CG+ SF+   S+P    +   C+D GT+  + + +  G +
Sbjct: 190 YRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVIEEVGGGD 243

[Close]

BLAST of CSPI06G21050.1 vs. ExPASy Swiss-Prot
Match: A0A0U1RRI6 (Centromere protein V-like protein 3 OS=Homo sapiens OX=9606 GN=CENPVL3 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 7.7e-20
Identity = 45/115 (39.13%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 5   LVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVST 64
           LV H GGCHC  VR+ V APA +   DC+C  C  + + HF+VP  RF LL  + + V T
Sbjct: 145 LVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLLQGAESIV-T 204

Query: 65  YTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSN 120
           Y   +H A H+FC  CG+ SF+   S+P    +   C+D GT+  + + +  G +
Sbjct: 205 YRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVIEEVGGGD 258

[Close]

BLAST of CSPI06G21050.1 vs. ExPASy TrEMBL
Match: A0A0A0KE05 (CENP-V/GFA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G403060 PE=3 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.2e-78
Identity = 137/138 (99.28%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120

Query: 121 EASYDQTGIASLSKLNIS 139
           EAS DQTGIASLSKLNIS
Sbjct: 121 EASCDQTGIASLSKLNIS 138

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BLAST of CSPI06G21050.1 vs. ExPASy TrEMBL
Match: A0A5D3CJK9 (Centromere protein V isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold807G00190 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 6.0e-76
Identity = 132/138 (95.65%), Postives = 134/138 (97.10%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFKCVDPGTLTH+EVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYRPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120

Query: 121 EASYDQTGIASLSKLNIS 139
           EASYD TGIAS SKLN S
Sbjct: 121 EASYDHTGIASFSKLNTS 138

[Close]

BLAST of CSPI06G21050.1 vs. ExPASy TrEMBL
Match: A0A1S4E4W3 (centromere protein V isoform X6 OS=Cucumis melo OX=3656 GN=LOC103502595 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 6.0e-76
Identity = 132/138 (95.65%), Postives = 134/138 (97.10%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFKCVDPGTLTH+EVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYRPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120

Query: 121 EASYDQTGIASLSKLNIS 139
           EASYD TGIAS SKLN S
Sbjct: 121 EASYDHTGIASFSKLNTS 138

[Close]

BLAST of CSPI06G21050.1 vs. ExPASy TrEMBL
Match: A0A1S4E5L6 (centromere protein V isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502595 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 6.0e-76
Identity = 132/138 (95.65%), Postives = 134/138 (97.10%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFKCVDPGTLTH+EVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYRPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120

Query: 121 EASYDQTGIASLSKLNIS 139
           EASYD TGIAS SKLN S
Sbjct: 121 EASYDHTGIASFSKLNTS 138

[Close]

BLAST of CSPI06G21050.1 vs. ExPASy TrEMBL
Match: A0A1S3CMD8 (centromere protein V isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502595 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.3e-75
Identity = 131/136 (96.32%), Postives = 133/136 (97.79%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFKCVDPGTLTH+EVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYRPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120

Query: 121 EASYDQTGIASLSKLN 137
           EASYD TGIAS SKLN
Sbjct: 121 EASYDHTGIASFSKLN 136

[Close]

BLAST of CSPI06G21050.1 vs. NCBI nr
Match: XP_004146757.2 (centromere protein V [Cucumis sativus] >XP_004146758.2 centromere protein V [Cucumis sativus] >XP_031743695.1 centromere protein V [Cucumis sativus] >KAE8647287.1 hypothetical protein Csa_003537 [Cucumis sativus])

HSP 1 Score: 301.2 bits (770), Expect = 4.6e-78
Identity = 137/138 (99.28%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120

Query: 121 EASYDQTGIASLSKLNIS 139
           EAS DQTGIASLSKLNIS
Sbjct: 121 EASCDQTGIASLSKLNIS 138

[Close]

BLAST of CSPI06G21050.1 vs. NCBI nr
Match: XP_016903271.1 (PREDICTED: centromere protein V isoform X6 [Cucumis melo])

HSP 1 Score: 293.1 bits (749), Expect = 1.2e-75
Identity = 132/138 (95.65%), Postives = 134/138 (97.10%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFKCVDPGTLTH+EVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYRPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120

Query: 121 EASYDQTGIASLSKLNIS 139
           EASYD TGIAS SKLN S
Sbjct: 121 EASYDHTGIASFSKLNTS 138

[Close]

BLAST of CSPI06G21050.1 vs. NCBI nr
Match: XP_016903270.1 (PREDICTED: centromere protein V isoform X1 [Cucumis melo] >KAA0045397.1 centromere protein V isoform X1 [Cucumis melo var. makuwa] >TYK11344.1 centromere protein V isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 293.1 bits (749), Expect = 1.2e-75
Identity = 132/138 (95.65%), Postives = 134/138 (97.10%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFKCVDPGTLTH+EVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYRPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120

Query: 121 EASYDQTGIASLSKLNIS 139
           EASYD TGIAS SKLN S
Sbjct: 121 EASYDHTGIASFSKLNTS 138

[Close]

BLAST of CSPI06G21050.1 vs. NCBI nr
Match: XP_008464790.1 (PREDICTED: centromere protein V isoform X2 [Cucumis melo])

HSP 1 Score: 292.0 bits (746), Expect = 2.8e-75
Identity = 131/136 (96.32%), Postives = 133/136 (97.79%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFKCVDPGTLTH+EVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYRPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120

Query: 121 EASYDQTGIASLSKLN 137
           EASYD TGIAS SKLN
Sbjct: 121 EASYDHTGIASFSKLN 136

[Close]

BLAST of CSPI06G21050.1 vs. NCBI nr
Match: XP_008464791.1 (PREDICTED: centromere protein V isoform X3 [Cucumis melo])

HSP 1 Score: 292.0 bits (746), Expect = 2.8e-75
Identity = 131/136 (96.32%), Postives = 133/136 (97.79%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFKCVDPGTLTH+EVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYRPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120

Query: 121 EASYDQTGIASLSKLN 137
           EASYD TGIAS SKLN
Sbjct: 121 EASYDHTGIASFSKLN 136

[Close]

BLAST of CSPI06G21050.1 vs. TAIR 10
Match: AT5G16940.1 (carbon-sulfur lyases )

HSP 1 Score: 217.6 bits (553), Expect = 6.2e-57
Identity = 92/134 (68.66%), Postives = 108/134 (80.60%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           M SEL+ H GGCHC K++WRV+A  SV+AW CNCS+C MR N HFIVP   F+LL DS +
Sbjct: 1   MESELIFHEGGCHCGKIKWRVKAARSVIAWSCNCSDCSMRGNVHFIVPSSNFELLDDSKD 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120
           F++TYTFG+HTAKHTFCK CGITSFY PRSNPDGVA+T KCV  GTL HIEV+ +DG NW
Sbjct: 61  FITTYTFGTHTAKHTFCKVCGITSFYIPRSNPDGVAVTVKCVKSGTLAHIEVKSYDGQNW 120

Query: 121 EASYDQTGIASLSK 135
           E S+ +TGIAS SK
Sbjct: 121 EMSHKKTGIASFSK 134

[Close]

BLAST of CSPI06G21050.1 vs. TAIR 10
Match: AT5G16940.2 (carbon-sulfur lyases )

HSP 1 Score: 217.6 bits (553), Expect = 6.2e-57
Identity = 92/134 (68.66%), Postives = 108/134 (80.60%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           M SEL+ H GGCHC K++WRV+A  SV+AW CNCS+C MR N HFIVP   F+LL DS +
Sbjct: 1   MESELIFHEGGCHCGKIKWRVKAARSVIAWSCNCSDCSMRGNVHFIVPSSNFELLDDSKD 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120
           F++TYTFG+HTAKHTFCK CGITSFY PRSNPDGVA+T KCV  GTL HIEV+ +DG NW
Sbjct: 61  FITTYTFGTHTAKHTFCKVCGITSFYIPRSNPDGVAVTVKCVKSGTLAHIEVKSYDGQNW 120

Query: 121 EASYDQTGIASLSK 135
           E S+ +TGIAS SK
Sbjct: 121 EMSHKKTGIASFSK 134

The following BLAST results are available for this feature:

BLAST of CSPI06G21050.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CXS4	3.6e-33	50.38	Centromere protein V OS=Mus musculus OX=10090 GN=Cenpv PE=1 SV=2	[more]
Q7Z7K6	8.0e-33	50.38	Centromere protein V OS=Homo sapiens OX=9606 GN=CENPV PE=1 SV=1	[more]
A0A0U1RR11	7.7e-20	39.13	Centromere protein V-like protein 1 OS=Homo sapiens OX=9606 GN=CENPVL1 PE=2 SV=1	[more]
P0DPI3	7.7e-20	39.13	Centromere protein V-like protein 2 OS=Homo sapiens OX=9606 GN=CENPVL2 PE=3 SV=1	[more]
A0A0U1RRI6	7.7e-20	39.13	Centromere protein V-like protein 3 OS=Homo sapiens OX=9606 GN=CENPVL3 PE=3 SV=1	[more]

BLAST of CSPI06G21050.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KE05	2.2e-78	99.28	CENP-V/GFA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G403060 ...	[more]
A0A5D3CJK9	6.0e-76	95.65	Centromere protein V isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S4E4W3	6.0e-76	95.65	centromere protein V isoform X6 OS=Cucumis melo OX=3656 GN=LOC103502595 PE=3 SV=...	[more]
A0A1S4E5L6	6.0e-76	95.65	centromere protein V isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502595 PE=3 SV=...	[more]
A0A1S3CMD8	1.3e-75	96.32	centromere protein V isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502595 PE=3 SV=...	[more]

BLAST of CSPI06G21050.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146757.2	4.6e-78	99.28	centromere protein V [Cucumis sativus] >XP_004146758.2 centromere protein V [Cuc...	[more]
XP_016903271.1	1.2e-75	95.65	PREDICTED: centromere protein V isoform X6 [Cucumis melo]	[more]
XP_016903270.1	1.2e-75	95.65	PREDICTED: centromere protein V isoform X1 [Cucumis melo] >KAA0045397.1 centrome...	[more]
XP_008464790.1	2.8e-75	96.32	PREDICTED: centromere protein V isoform X2 [Cucumis melo]	[more]
XP_008464791.1	2.8e-75	96.32	PREDICTED: centromere protein V isoform X3 [Cucumis melo]	[more]

BLAST of CSPI06G21050.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16940.1	6.2e-57	68.66	carbon-sulfur lyases	[more]
AT5G16940.2	6.2e-57	68.66	carbon-sulfur lyases	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.170.150.70		coord: 8..124 e-value: 5.4E-25 score: 89.4
None	No IPR available	PANTHER	PTHR28620:SF9	CARBON-SULFUR LYASES	coord: 1..134
None	No IPR available	PANTHER	PTHR28620	CENTROMERE PROTEIN V	coord: 1..134
IPR006913	CENP-V/GFA domain	PFAM	PF04828	GFA	coord: 31..105 e-value: 1.4E-7 score: 31.7
IPR006913	CENP-V/GFA domain	PROSITE	PS51891	CENP_V_GFA	coord: 8..121 score: 24.590271
IPR011057	Mss4-like superfamily	SUPERFAMILY	51316	Mss4-like	coord: 6..120

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI06G21050	CSPI06G21050	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G21050.1.utr3p2	CSPI06G21050.1.utr3p2	three_prime_UTR
CSPI06G21050.1.utr3p1	CSPI06G21050.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G21050.1.cds2	CSPI06G21050.1.cds2	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G21050.1.utr5p2	CSPI06G21050.1.utr5p2	five_prime_UTR
CSPI06G21050.1.utr5p1	CSPI06G21050.1.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI06G21050.1	CSPI06G21050.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016846	carbon-sulfur lyase activity
molecular_function	GO:0046872	metal ion binding