CSPI05G22530.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI05G22530.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Signal recognition particle receptor subunit beta
Location	Chr5: 22957651 .. 22960333 (+)
Sequence length	1361
RNA-Seq Expression	CSPI05G22530.1
Synteny	CSPI05G22530.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAGAAATAACTTTAAAATGAAAAAGGGAAAAAAAGGGAAAGGAAAGGAAAGGAAAGGAAAGGAAGGGAAAGACACGGTGGTGGAGTTCTAGGGCTCACCACGAGCTTGTGTACTTCTGCCTAATATTGTTCATCCTCAAATTGATCGTCTTCTCATTTCATATTTGTAGCAGAATTATCGGATCAGGTACTATTTTCCTCGATTCTTCATTTCATGATCTATGTTTTGTGGGTTTCATCTAATGTCCTCAATTGGGGTTTTTTTTTGGGTATAGGGTTTCGAACAGACTTTGTGGGCTAGGATATTTTTTGACTGAATAATTCAACTTCTGGAGCGTATTGTCTCTGAAAATTTAAAAATGGAGGGTACGGAACAGTGGAAGGTTCAGGTAGAACAATTGAAGGTCCAGATGGAGCAATGGCTGGAACAAGGCTTGGAGTTTGTTCACCAAATACCCCCAATTCAACTCTACGTTGGGGTTGGTGTGTTGTTGTTTACCACCCTACTTCTTTTATTCAGTGAGTCTTTCTCTCTCTCTCTCTCTCTTTTTTTGTTTCAATTTTCTTTCTTTAGCTCTGTTGTTGAATGTTGCTTTCTGTAATTGTATATGGTGAAACATTTGGGAATTTGAAGTTGACTACCCCTTGTCTCTTGGCAGCTCGCTTGTTTAAGCGCAGGAAATCGAATACCATTGTACTCAGTGGGCTCAGTGGAAGTGGGAAAACTATTCTTTTTTATCAAGTAAGCATCCGCATTTCAGGTTTCGTCCTGTATTTAACAGGAATTCAATTCTTGTTAGATATTTGATTAGTAGTTTTTTGGTTTATTCATTTACTTTGATTTGAATTGAATGGTTAAGCCTTTTTTTATATGAGTTTGTACACTAGTTGTATTTCTCACCATCTTCTCGAGAAGTAGCCTTAAGGGCACCAATGTTATCTAGGAACATTGTCCACATTTCAGTAAGAATGCCTATTCTTCAAGGTCAGTTAGGAAGTCAGTAAAACGGTGTCTGTGCATGCTTTTATGTTATATATAGGTGTTTGGTATCTTGGTTACTTCAAAGCTTAATTTAATGATTGATTCGAAGCAAACAATACTGTTATATACTTTTAAGATAAAGTCTATATATATGTATTAAGGATTTGTCCTTGACAGGGCTTGGGGGGAGACCCCTCTTGCCTTCTCGATGCATTATAATGGTTTTTATGTCTTTGCAGCTTCGCGATGGTTCCTCTCATCAGGGTACTGTTACATCCATGGAACCTAACGAGGGCACTTTTGTGCTTCATTCTGAAATAGCAAAGGTAATATATGTTTTATAGGGCTGACGTGTAGGAATTGAGAATGCTCCATTTCTGAACCATTGCAGCCTTAAAAATCAAAACTAACAATGCTATGTGGCTTCTGTTTCCAGTAGTCTAACTTTCTTTTTTGCAGTACTGGATCAAACTTAAACTAAAAGATAATGCCTTTTCTTTGTGTGATTTGGTAGAAGGACAAACTGAAGCCTGTTCATCTTGTTGATGTCCCTGGGCATTCTCGCCTTCGAGCCAAACTAGATGACTTTTTGCCTCAAGCAGCTGGTGTAGTCTTTGTGGTGGATGCTTTGGATTTTTTGCCCAACTGTCGTGCAGCTTCAGAGTAATGGATTATTCTTTTGAACTTTTTTGCTTTCTATGCGTGTGTGCATCTACTATAGTAAATAGGAGCGTATAAACTATAAGTTCTGTGTCACCCAAGTTCTGCATGAATGTGTAACATTAGTTTGATTCCCCTGAGTTCTCACACTTCTCTCTTTGGAAATCATCCCTACATTACAACCGAAACGTTCTCACATGTGCTTTACACAATATGTTTTAGTACACAAAACAGTTAGATAAATAAATGTCTTATGTTACTAGTTTAATTTAATTTAATTTCTCTTGAAGGTATCTTTATGACATTCTGACTAATGCGAGTGTTGTGAAGAAGAAAATCCCTGTCCTGATACTATGCAACAAAACAGACAAGGTGACAGCCCACACAAAGGAGTTTATCAATAGGCAGATGGAAAAAGAGATGTATGGCACTCAACTTTCTATATTACGAGCATTCTTTTAATGATCTGTTAAGCAAACTATTCAAACTACAGTAGGTTTATTATCTGCAATGAATTTGTATTTCAATTTTTGACATCGTGTTTTTTTTTACGTTTGTACAGTGACAAGTTACGTGTATCGAGAAGTGCAATCTCAGCTGCTGATATCACAAATGACTTCACACTAGGAATACCTGGAAAAGCATTTTCGTTCACACAGTGCCATAACAAAGTTGCCGTTGCTGAAGCCTCTGGATTGACGGGTGAAGTATCTGAGGTGGAGCAATTTATAAGGGAAAATGTCAAGTTCTAGATGTACATTCGATACTACGTGTTGATTGGTGCTTTTTTGCCCCTTCGATATGAAACCCCGACATTTGTACTTTTGAGAATTTCTGAATTTCATCTCAATTTTTGTAGTTTCTTAAGACTGAAGAAGTTATATGTCCATGCCTTCTTCCCTTGTTGATAAAAGGACCAATATTTTAGTGGGAAACTGTCGGTACAATGTCATACAAAGCCAGAAACGTTGTTTTTTTTAAATAATAGAAAGTGAAATCAAGATGTTGTTGCTTTCTTTTGGTGGTTAAGACAGTTGGAG

mRNA sequence

ATAAGAAATAACTTTAAAATGAAAAAGGGAAAAAAAGGGAAAGGAAAGGAAAGGAAAGGAAAGGAAGGGAAAGACACGGTGGTGGAGTTCTAGGGCTCACCACGAGCTTGTGTACTTCTGCCTAATATTGTTCATCCTCAAATTGATCGTCTTCTCATTTCATATTTGTAGCAGAATTATCGGATCAGGGTTTCGAACAGACTTTGTGGGCTAGGATATTTTTTGACTGAATAATTCAACTTCTGGAGCGTATTGTCTCTGAAAATTTAAAAATGGAGGGTACGGAACAGTGGAAGGTTCAGGTAGAACAATTGAAGGTCCAGATGGAGCAATGGCTGGAACAAGGCTTGGAGTTTGTTCACCAAATACCCCCAATTCAACTCTACGTTGGGGTTGGTGTGTTGTTGTTTACCACCCTACTTCTTTTATTCACTCGCTTGTTTAAGCGCAGGAAATCGAATACCATTGTACTCAGTGGGCTCAGTGGAAGTGGGAAAACTATTCTTTTTTATCAACTTCGCGATGGTTCCTCTCATCAGGGTACTGTTACATCCATGGAACCTAACGAGGGCACTTTTGTGCTTCATTCTGAAATAGCAAAGAAGGACAAACTGAAGCCTGTTCATCTTGTTGATGTCCCTGGGCATTCTCGCCTTCGAGCCAAACTAGATGACTTTTTGCCTCAAGCAGCTGGTGTAGTCTTTGTGGTGGATGCTTTGGATTTTTTGCCCAACTGTCGTGCAGCTTCAGAGTATCTTTATGACATTCTGACTAATGCGAGTGTTGTGAAGAAGAAAATCCCTGTCCTGATACTATGCAACAAAACAGACAAGGTGACAGCCCACACAAAGGAGTTTATCAATAGGCAGATGGAAAAAGAGATTGACAAGTTACGTGTATCGAGAAGTGCAATCTCAGCTGCTGATATCACAAATGACTTCACACTAGGAATACCTGGAAAAGCATTTTCGTTCACACAGTGCCATAACAAAGTTGCCGTTGCTGAAGCCTCTGGATTGACGGGTGAAGTATCTGAGGTGGAGCAATTTATAAGGGAAAATGTCAAGTTCTAGATGTACATTCGATACTACGTGTTGATTGGTGCTTTTTTGCCCCTTCGATATGAAACCCCGACATTTGTACTTTTGAGAATTTCTGAATTTCATCTCAATTTTTGTAGTTTCTTAAGACTGAAGAAGTTATATGTCCATGCCTTCTTCCCTTGTTGATAAAAGGACCAATATTTTAGTGGGAAACTGTCGGTACAATGTCATACAAAGCCAGAAACGTTGTTTTTTTTAAATAATAGAAAGTGAAATCAAGATGTTGTTGCTTTCTTTTGGTGGTTAAGACAGTTGGAG

Coding sequence (CDS)

ATGGAGGGTACGGAACAGTGGAAGGTTCAGGTAGAACAATTGAAGGTCCAGATGGAGCAATGGCTGGAACAAGGCTTGGAGTTTGTTCACCAAATACCCCCAATTCAACTCTACGTTGGGGTTGGTGTGTTGTTGTTTACCACCCTACTTCTTTTATTCACTCGCTTGTTTAAGCGCAGGAAATCGAATACCATTGTACTCAGTGGGCTCAGTGGAAGTGGGAAAACTATTCTTTTTTATCAACTTCGCGATGGTTCCTCTCATCAGGGTACTGTTACATCCATGGAACCTAACGAGGGCACTTTTGTGCTTCATTCTGAAATAGCAAAGAAGGACAAACTGAAGCCTGTTCATCTTGTTGATGTCCCTGGGCATTCTCGCCTTCGAGCCAAACTAGATGACTTTTTGCCTCAAGCAGCTGGTGTAGTCTTTGTGGTGGATGCTTTGGATTTTTTGCCCAACTGTCGTGCAGCTTCAGAGTATCTTTATGACATTCTGACTAATGCGAGTGTTGTGAAGAAGAAAATCCCTGTCCTGATACTATGCAACAAAACAGACAAGGTGACAGCCCACACAAAGGAGTTTATCAATAGGCAGATGGAAAAAGAGATTGACAAGTTACGTGTATCGAGAAGTGCAATCTCAGCTGCTGATATCACAAATGACTTCACACTAGGAATACCTGGAAAAGCATTTTCGTTCACACAGTGCCATAACAAAGTTGCCGTTGCTGAAGCCTCTGGATTGACGGGTGAAGTATCTGAGGTGGAGCAATTTATAAGGGAAAATGTCAAGTTCTAG

Protein sequence

MEGTEQWKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRRKSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADITNDFTLGIPGKAFSFTQCHNKVAVAEASGLTGEVSEVEQFIRENVKF*

Homology

[Close]

BLAST of CSPI05G22530.1 vs. ExPASy Swiss-Prot
Match: Q54XX1 (Signal recognition particle receptor subunit beta OS=Dictyostelium discoideum OX=44689 GN=srprb PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.0e-24
Identity = 69/206 (33.50%), Postives = 107/206 (51.94%), Query Frame = 0


Query: 58  KRRKSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPV 117
           K ++   I + GLS +GKT L   L +      T TS+  N G ++  ++       K +
Sbjct: 81  KVKRGVNIAILGLSNAGKTALLLNLTNVDKKISTHTSITTNNGVYITENK-------KKL 140

Query: 118 HLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIP 177
            ++DVPG+ + +A L   L  +A +++V+D   F+ N    ++YLYDILTN SV +KKIP
Sbjct: 141 PIIDVPGNGKAKASLPKILSNSACIIYVIDGTTFIDNSTQEAQYLYDILTNESVYQKKIP 200

Query: 178 VLILCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSA----ISAADITNDFTLGIPGKAFS 237
           VL+  NK D  +    E +   +E+E+D LR +R A    +   +   D  LGI G  F 
Sbjct: 201 VLVFNNKMDLDSTIDTEQVKNILERELDDLRRTRGATPIVLGQEEDKKDIYLGIEGTPFQ 260

Query: 238 FTQCHNKVAVA--EASGLTGEVSEVE 258
           F    N V  +   AS   GE+ E++
Sbjct: 261 FDHLPNDVQFSNGSASPSNGELKEID 279

[Close]

BLAST of CSPI05G22530.1 vs. ExPASy Swiss-Prot
Match: Q4FZX7 (Signal recognition particle receptor subunit beta OS=Rattus norvegicus OX=10116 GN=Srprb PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.4e-22
Identity = 79/238 (33.19%), Postives = 124/238 (52.10%), Query Frame = 0


Query: 19  EQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRRKSNTIVL-SGLSGSGKTI 78
           + +L+   + + Q  P  L V V VL     L+ +  ++ R+ S   VL  GL  SGKT+
Sbjct: 18  QPYLDSLRQELQQRDPTLLSVAVAVLAVLLTLVFWKFIWSRKSSQRAVLFVGLCDSGKTL 77

Query: 79  LFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLVDVPGHSRLRAK-LDDFL 138
           LF +L  G  ++ T TS+  +   + +++     ++   + L+D+PGH  LR + LD F 
Sbjct: 78  LFVRLLTG-QYRDTQTSITDSSAIYKVNN-----NRGNSLTLIDLPGHESLRLQFLDRFK 137

Query: 139 PQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFI 198
             A  VVFVVD+  F    +  +E+LY +L ++  +K     L+ CNK D   A + + I
Sbjct: 138 SSARAVVFVVDSATFQREVKDVAEFLYQVLIDSMALKNTPAFLVACNKQDIAMAKSAKLI 197

Query: 199 NRQMEKEIDKLRVSRSAISA---ADITNDFTLGIPGKAFSFTQCHNKVAVAEASGLTG 252
            +Q+EKE++ LRV+RSA  +   +  T    LG  GK F F+Q   KV   E S   G
Sbjct: 198 QQQLEKELNTLRVTRSAAPSTLDSSSTAPAQLGKKGKEFEFSQLPLKVEFLECSAKGG 249

[Close]

BLAST of CSPI05G22530.1 vs. ExPASy Swiss-Prot
Match: P47758 (Signal recognition particle receptor subunit beta OS=Mus musculus OX=10090 GN=Srprb PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.9e-22
Identity = 79/238 (33.19%), Postives = 125/238 (52.52%), Query Frame = 0


Query: 19  EQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRRKSNTIVL-SGLSGSGKTI 78
           + +L+   + + Q  P  L V V +L     L+ +  ++ R+ S   VL  GL  SGKT+
Sbjct: 18  QPYLDSLRQELQQRDPTLLSVAVALLAVLLTLVFWKFIWSRKSSQRAVLFVGLCDSGKTL 77

Query: 79  LFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLVDVPGHSRLRAK-LDDFL 138
           LF +L  G  ++ T TS+  +   + +++     ++   + L+D+PGH  LR + LD F 
Sbjct: 78  LFVRLLTG-QYRDTQTSITDSSAIYKVNN-----NRGNSLTLIDLPGHESLRFQLLDRFK 137

Query: 139 PQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFI 198
             A  VVFVVD+  F    +  +E+LY +L ++  +K    +LI CNK D   A + + I
Sbjct: 138 SSARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNSPSLLIACNKQDIAMAKSAKLI 197

Query: 199 NRQMEKEIDKLRVSRSAISA---ADITNDFTLGIPGKAFSFTQCHNKVAVAEASGLTG 252
            +Q+EKE++ LRV+RSA  +   +  T    LG  GK F F+Q   KV   E S   G
Sbjct: 198 QQQLEKELNTLRVTRSAAPSTLDSSSTAPAQLGKKGKEFEFSQLPLKVEFLECSAKGG 249

[Close]

BLAST of CSPI05G22530.1 vs. ExPASy Swiss-Prot
Match: Q9Y5M8 (Signal recognition particle receptor subunit beta OS=Homo sapiens OX=9606 GN=SRPRB PE=1 SV=3)

HSP 1 Score: 105.1 bits (261), Expect = 1.2e-21
Identity = 80/239 (33.47%), Postives = 128/239 (53.56%), Query Frame = 0


Query: 19  EQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRRKSN--TIVLSGLSGSGKT 78
           + +L+   + + Q  P  L V V VL    L L+F +L + R+S+   ++L GL  SGKT
Sbjct: 20  QPYLDTLRQELQQTDPTLLSVVVAVLA-VLLTLVFWKLIRSRRSSQRAVLLVGLCDSGKT 79

Query: 79  ILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLVDVPGHSRLRAK-LDDF 138
           +LF +L  G  ++ T TS+  +   + +++     ++   + L+D+PGH  LR + L+ F
Sbjct: 80  LLFVRLLTG-LYRDTQTSITDSCAVYRVNN-----NRGNSLTLIDLPGHESLRLQFLERF 139

Query: 139 LPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEF 198
              A  +VFVVD+  F    +  +E+LY +L ++  +K     LI CNK D   A + + 
Sbjct: 140 KSSARAIVFVVDSAAFQREVKDVAEFLYQVLIDSMGLKNTPSFLIACNKQDIAMAKSAKL 199

Query: 199 INRQMEKEIDKLRVSRSAISA---ADITNDFTLGIPGKAFSFTQCHNKVAVAEASGLTG 252
           I +Q+EKE++ LRV+RSA  +   +  T    LG  GK F F+Q   KV   E S   G
Sbjct: 200 IQQQLEKELNTLRVTRSAAPSTLDSSSTAPAQLGKKGKEFEFSQLPLKVEFLECSAKGG 251

[Close]

BLAST of CSPI05G22530.1 vs. ExPASy Swiss-Prot
Match: P36057 (Signal recognition particle receptor subunit beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SRP102 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.8e-09
Identity = 51/149 (34.23%), Postives = 72/149 (48.32%), Query Frame = 0


Query: 64  TIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLVDVP 123
           +I+++G   SGKT L   L    S + TV S EP        S +          LVD P
Sbjct: 40  SIIIAGPQNSGKTSLL-TLLTTDSVRPTVVSQEPLSAADYDGSGVT---------LVDFP 99

Query: 124 GHSRLRAKLDDFLPQAA----GVVFVVDALDFLPNCRAASEYLYDILT-NASVVKKKIPV 183
           GH +LR KL D+L   A    G++F+VD+          +E+L DIL+   S  +  I +
Sbjct: 100 GHVKLRYKLSDYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCENGIDI 159

Query: 184 LILCNKTDKVTAHTKEFINRQMEKEIDKL 208
           LI CNK++  TA     I   +E EI K+
Sbjct: 160 LIACNKSELFTARPPSKIKDALESEIQKV 178

[Close]

BLAST of CSPI05G22530.1 vs. ExPASy TrEMBL
Match: A0A0A0KSA6 (Signal recognition particle receptor subunit beta OS=Cucumis sativus OX=3659 GN=Csa_5G600910 PE=3 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 3.8e-143
Identity = 265/266 (99.62%), Postives = 265/266 (99.62%), Query Frame = 0


Query: 1   MEGTEQWKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRR 60
           MEGTEQWKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRR
Sbjct: 1   MEGTEQWKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRR 60

Query: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120
           KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV
Sbjct: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADITNDFTLGIPGKAFSFTQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADI NDFTLGIPGKAFSFTQCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGIPGKAFSFTQCHNK 240

Query: 241 VAVAEASGLTGEVSEVEQFIRENVKF 267
           VAVAEASGLTGEVSEVEQFIRENVKF
Sbjct: 241 VAVAEASGLTGEVSEVEQFIRENVKF 266

[Close]

BLAST of CSPI05G22530.1 vs. ExPASy TrEMBL
Match: E5GBI2 (Signal recognition particle receptor subunit beta OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 6.0e-141
Identity = 261/266 (98.12%), Postives = 264/266 (99.25%), Query Frame = 0


Query: 1   MEGTEQWKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRR 60
           MEGTEQWKVQVEQLKVQMEQWLE+GLEFVHQIPPIQLYVGVGVLLFTTLLLL TRLFKRR
Sbjct: 1   MEGTEQWKVQVEQLKVQMEQWLERGLEFVHQIPPIQLYVGVGVLLFTTLLLLLTRLFKRR 60

Query: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120
           KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV
Sbjct: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADITNDFTLGIPGKAFSFTQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAIS ADI+NDFTLGIPGKAFSFTQC+NK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISTADISNDFTLGIPGKAFSFTQCYNK 240

Query: 241 VAVAEASGLTGEVSEVEQFIRENVKF 267
           VAVAEASGLTGEVSEVEQFIRENVKF
Sbjct: 241 VAVAEASGLTGEVSEVEQFIRENVKF 266

[Close]

BLAST of CSPI05G22530.1 vs. ExPASy TrEMBL
Match: A0A1S3BEG3 (Signal recognition particle receptor subunit beta OS=Cucumis melo OX=3656 GN=LOC103488993 PE=3 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 6.0e-141
Identity = 261/266 (98.12%), Postives = 264/266 (99.25%), Query Frame = 0


Query: 1   MEGTEQWKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRR 60
           MEGTEQWKVQVEQLKVQMEQWLE+GLEFVHQIPPIQLYVGVGVLLFTTLLLL TRLFKRR
Sbjct: 1   MEGTEQWKVQVEQLKVQMEQWLERGLEFVHQIPPIQLYVGVGVLLFTTLLLLLTRLFKRR 60

Query: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120
           KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV
Sbjct: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADITNDFTLGIPGKAFSFTQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAIS ADI+NDFTLGIPGKAFSFTQC+NK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISTADISNDFTLGIPGKAFSFTQCYNK 240

Query: 241 VAVAEASGLTGEVSEVEQFIRENVKF 267
           VAVAEASGLTGEVSEVEQFIRENVKF
Sbjct: 241 VAVAEASGLTGEVSEVEQFIRENVKF 266

[Close]

BLAST of CSPI05G22530.1 vs. ExPASy TrEMBL
Match: A0A6J1DE59 (Signal recognition particle receptor subunit beta OS=Momordica charantia OX=3673 GN=LOC111019241 PE=3 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 1.7e-135
Identity = 249/265 (93.96%), Postives = 258/265 (97.36%), Query Frame = 0


Query: 1   MEGTEQWKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRR 60
           MEGTEQWKV VEQLKVQMEQWL+QGLE VHQIPPIQLYVGVGVLL TTLLLL TRLFKRR
Sbjct: 1   MEGTEQWKVHVEQLKVQMEQWLQQGLELVHQIPPIQLYVGVGVLLLTTLLLLLTRLFKRR 60

Query: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120
           KSNTIVLSGLSGSGKT++FYQLRDGSSHQGTVTSMEPNEGTFVLHSEI+KK+KLKPVHLV
Sbjct: 61  KSNTIVLSGLSGSGKTVIFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKKNKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLD+FLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADITNDFTLGIPGKAFSFTQCHNK 240
           LCNKTDKVTAHTKEFINRQ EKEIDKLRVSRSAISAADI NDFTLG+PGKAFSF+QCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQXEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK 240

Query: 241 VAVAEASGLTGEVSEVEQFIRENVK 266
           V VAEASGLTGEV+EVEQFIRENVK
Sbjct: 241 VTVAEASGLTGEVTEVEQFIRENVK 265

[Close]

BLAST of CSPI05G22530.1 vs. ExPASy TrEMBL
Match: A0A6J1D1F7 (Signal recognition particle receptor subunit beta OS=Momordica charantia OX=3673 GN=LOC111016123 PE=3 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 3.8e-135
Identity = 248/265 (93.58%), Postives = 257/265 (96.98%), Query Frame = 0


Query: 1   MEGTEQWKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRR 60
           MEGTEQWKVQ EQ+KVQMEQWL+ GLEFVHQIPPIQLYVGVGVLL TTLLLL TRLFKRR
Sbjct: 1   MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLFKRR 60

Query: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120
           KSNTIVL GLSGSGKT+LFYQLRDGSSHQGTVTSMEPNEGTFVLHSEI+KKDKLKPVHLV
Sbjct: 61  KSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLD+FLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADITNDFTLGIPGKAFSFTQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADI NDFTLG+PGKAFSF+QCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK 240

Query: 241 VAVAEASGLTGEVSEVEQFIRENVK 266
           VAV EASGL G+V+EVEQFIRENVK
Sbjct: 241 VAVGEASGLMGQVTEVEQFIRENVK 265

[Close]

BLAST of CSPI05G22530.1 vs. NCBI nr
Match: XP_004135257.1 (signal recognition particle receptor subunit beta [Cucumis sativus] >KGN51789.1 hypothetical protein Csa_007800 [Cucumis sativus])

HSP 1 Score: 517.3 bits (1331), Expect = 7.8e-143
Identity = 265/266 (99.62%), Postives = 265/266 (99.62%), Query Frame = 0


Query: 1   MEGTEQWKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRR 60
           MEGTEQWKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRR
Sbjct: 1   MEGTEQWKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRR 60

Query: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120
           KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV
Sbjct: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADITNDFTLGIPGKAFSFTQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADI NDFTLGIPGKAFSFTQCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGIPGKAFSFTQCHNK 240

Query: 241 VAVAEASGLTGEVSEVEQFIRENVKF 267
           VAVAEASGLTGEVSEVEQFIRENVKF
Sbjct: 241 VAVAEASGLTGEVSEVEQFIRENVKF 266

[Close]

BLAST of CSPI05G22530.1 vs. NCBI nr
Match: XP_008446189.1 (PREDICTED: signal recognition particle receptor subunit beta-like [Cucumis melo] >ADN33824.1 signal recognition particle receptor subunit beta [Cucumis melo subsp. melo])

HSP 1 Score: 510.0 bits (1312), Expect = 1.2e-140
Identity = 261/266 (98.12%), Postives = 264/266 (99.25%), Query Frame = 0


Query: 1   MEGTEQWKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRR 60
           MEGTEQWKVQVEQLKVQMEQWLE+GLEFVHQIPPIQLYVGVGVLLFTTLLLL TRLFKRR
Sbjct: 1   MEGTEQWKVQVEQLKVQMEQWLERGLEFVHQIPPIQLYVGVGVLLFTTLLLLLTRLFKRR 60

Query: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120
           KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV
Sbjct: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADITNDFTLGIPGKAFSFTQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAIS ADI+NDFTLGIPGKAFSFTQC+NK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISTADISNDFTLGIPGKAFSFTQCYNK 240

Query: 241 VAVAEASGLTGEVSEVEQFIRENVKF 267
           VAVAEASGLTGEVSEVEQFIRENVKF
Sbjct: 241 VAVAEASGLTGEVSEVEQFIRENVKF 266

[Close]

BLAST of CSPI05G22530.1 vs. NCBI nr
Match: XP_038892002.1 (signal recognition particle receptor subunit beta-like [Benincasa hispida])

HSP 1 Score: 502.3 bits (1292), Expect = 2.6e-138
Identity = 254/266 (95.49%), Postives = 260/266 (97.74%), Query Frame = 0


Query: 1   MEGTEQWKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRR 60
           MEGTEQWKVQVEQLKVQM+QWLEQGL+FVHQIPPIQLYVGVGVLLFTT+LLL TRLFKRR
Sbjct: 1   MEGTEQWKVQVEQLKVQMKQWLEQGLDFVHQIPPIQLYVGVGVLLFTTVLLLLTRLFKRR 60

Query: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120
           KSNTIVLSGLSGSGKT+LFYQLRDGSSHQGTVTSMEPNEGTFVLHSEI KKDKLKPVHLV
Sbjct: 61  KSNTIVLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADITNDFTLGIPGKAFSFTQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRS ISAADI+NDFTLG+PGKAFSFT CHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSVISAADISNDFTLGVPGKAFSFTHCHNK 240

Query: 241 VAVAEASGLTGEVSEVEQFIRENVKF 267
           V VAEASGL GEVSEVEQFIRENVKF
Sbjct: 241 VTVAEASGLNGEVSEVEQFIRENVKF 266

[Close]

BLAST of CSPI05G22530.1 vs. NCBI nr
Match: XP_022151281.1 (signal recognition particle receptor subunit beta-like [Momordica charantia])

HSP 1 Score: 491.9 bits (1265), Expect = 3.5e-135
Identity = 249/265 (93.96%), Postives = 258/265 (97.36%), Query Frame = 0


Query: 1   MEGTEQWKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRR 60
           MEGTEQWKV VEQLKVQMEQWL+QGLE VHQIPPIQLYVGVGVLL TTLLLL TRLFKRR
Sbjct: 1   MEGTEQWKVHVEQLKVQMEQWLQQGLELVHQIPPIQLYVGVGVLLLTTLLLLLTRLFKRR 60

Query: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120
           KSNTIVLSGLSGSGKT++FYQLRDGSSHQGTVTSMEPNEGTFVLHSEI+KK+KLKPVHLV
Sbjct: 61  KSNTIVLSGLSGSGKTVIFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKKNKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLD+FLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADITNDFTLGIPGKAFSFTQCHNK 240
           LCNKTDKVTAHTKEFINRQ EKEIDKLRVSRSAISAADI NDFTLG+PGKAFSF+QCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQXEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK 240

Query: 241 VAVAEASGLTGEVSEVEQFIRENVK 266
           V VAEASGLTGEV+EVEQFIRENVK
Sbjct: 241 VTVAEASGLTGEVTEVEQFIRENVK 265

[Close]

BLAST of CSPI05G22530.1 vs. NCBI nr
Match: XP_022147102.1 (signal recognition particle receptor subunit beta-like isoform X1 [Momordica charantia] >XP_022147104.1 signal recognition particle receptor subunit beta-like isoform X1 [Momordica charantia] >XP_022147105.1 signal recognition particle receptor subunit beta-like isoform X1 [Momordica charantia] >XP_022147106.1 signal recognition particle receptor subunit beta-like isoform X1 [Momordica charantia] >XP_022147107.1 signal recognition particle receptor subunit beta-like isoform X1 [Momordica charantia])

HSP 1 Score: 490.7 bits (1262), Expect = 7.8e-135
Identity = 248/265 (93.58%), Postives = 257/265 (96.98%), Query Frame = 0


Query: 1   MEGTEQWKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRR 60
           MEGTEQWKVQ EQ+KVQMEQWL+ GLEFVHQIPPIQLYVGVGVLL TTLLLL TRLFKRR
Sbjct: 1   MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLFKRR 60

Query: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120
           KSNTIVL GLSGSGKT+LFYQLRDGSSHQGTVTSMEPNEGTFVLHSEI+KKDKLKPVHLV
Sbjct: 61  KSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLD+FLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADITNDFTLGIPGKAFSFTQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADI NDFTLG+PGKAFSF+QCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK 240

Query: 241 VAVAEASGLTGEVSEVEQFIRENVK 266
           VAV EASGL G+V+EVEQFIRENVK
Sbjct: 241 VAVGEASGLMGQVTEVEQFIRENVK 265

[Close]

BLAST of CSPI05G22530.1 vs. TAIR 10
Match: AT5G05670.2 (signal recognition particle binding )

HSP 1 Score: 390.6 bits (1002), Expect = 1.0e-108
Identity = 193/256 (75.39%), Postives = 223/256 (87.11%), Query Frame = 0


Query: 11  VEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLL-LFTRLFKRRKSNTIVLSG 70
           +E LK+  EQW  QG+E++ +IPP QLY  +GVLLFTT+LL L  RL +R KSNT++LSG
Sbjct: 4   LEDLKILAEQWSHQGIEYLQKIPPNQLYAAIGVLLFTTILLFLSIRLVRRTKSNTVLLSG 63

Query: 71  LSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLVDVPGHSRLR 130
           L+GSGKT+LFYQLRDGSSHQGTVTSMEPNEGTFVLHSE  KK K+KPVHLVDVPGHSRLR
Sbjct: 64  LTGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSENTKKGKIKPVHLVDVPGHSRLR 123

Query: 131 AKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVT 190
            KL++FLPQAA +VFVVDAL+FLPNCRAASEYLY+ILTNA+VVKKKIPVL+ CNKTDK+T
Sbjct: 124 PKLEEFLPQAAAIVFVVDALEFLPNCRAASEYLYEILTNANVVKKKIPVLLCCNKTDKLT 183

Query: 191 AHTKEFINRQMEKEIDKLRVSRSAISAADITNDFTLGIPGKAFSFTQCHNKVAVAEASGL 250
           AHTKEFI +QMEKEI+KLR SRSA+S ADI NDFT+GI G+ FSFT C NKV VAEASGL
Sbjct: 184 AHTKEFIRKQMEKEIEKLRASRSAVSTADIANDFTIGIEGEVFSFTHCSNKVTVAEASGL 243

Query: 251 TGEVSEVEQFIRENVK 266
           TGE  ++E FIRE +K
Sbjct: 244 TGETIQIEDFIREYIK 259

[Close]

BLAST of CSPI05G22530.1 vs. TAIR 10
Match: AT5G05670.1 (signal recognition particle binding )

HSP 1 Score: 390.6 bits (1002), Expect = 1.0e-108
Identity = 193/256 (75.39%), Postives = 223/256 (87.11%), Query Frame = 0


Query: 11  VEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLL-LFTRLFKRRKSNTIVLSG 70
           +E LK+  EQW  QG+E++ +IPP QLY  +GVLLFTT+LL L  RL +R KSNT++LSG
Sbjct: 4   LEDLKILAEQWSHQGIEYLQKIPPNQLYAAIGVLLFTTILLFLSIRLVRRTKSNTVLLSG 63

Query: 71  LSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLVDVPGHSRLR 130
           L+GSGKT+LFYQLRDGSSHQGTVTSMEPNEGTFVLHSE  KK K+KPVHLVDVPGHSRLR
Sbjct: 64  LTGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSENTKKGKIKPVHLVDVPGHSRLR 123

Query: 131 AKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVT 190
            KL++FLPQAA +VFVVDAL+FLPNCRAASEYLY+ILTNA+VVKKKIPVL+ CNKTDK+T
Sbjct: 124 PKLEEFLPQAAAIVFVVDALEFLPNCRAASEYLYEILTNANVVKKKIPVLLCCNKTDKLT 183

Query: 191 AHTKEFINRQMEKEIDKLRVSRSAISAADITNDFTLGIPGKAFSFTQCHNKVAVAEASGL 250
           AHTKEFI +QMEKEI+KLR SRSA+S ADI NDFT+GI G+ FSFT C NKV VAEASGL
Sbjct: 184 AHTKEFIRKQMEKEIEKLRASRSAVSTADIANDFTIGIEGEVFSFTHCSNKVTVAEASGL 243

Query: 251 TGEVSEVEQFIRENVK 266
           TGE  ++E FIRE +K
Sbjct: 244 TGETIQIEDFIREYIK 259

[Close]

BLAST of CSPI05G22530.1 vs. TAIR 10
Match: AT2G18770.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 387.1 bits (993), Expect = 1.1e-107
Identity = 194/256 (75.78%), Postives = 222/256 (86.72%), Query Frame = 0


Query: 11  VEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRRKSNTIVLSGL 70
           +E LK+  EQW +QGLEFV +IPP QLY  +GVLL  T+ LL  RLF+R KSNT++LSGL
Sbjct: 4   LEDLKIVAEQWSKQGLEFVQKIPPPQLYTAIGVLLLATIWLLSIRLFRRTKSNTVLLSGL 63

Query: 71  SGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSE-IAKKDKLKPVHLVDVPGHSRLR 130
           SGSGKT+LFYQLRDGSSHQG VTSMEPNEGTFVLH+E   KK K+KPVHL+DVPGHSRL 
Sbjct: 64  SGSGKTVLFYQLRDGSSHQGAVTSMEPNEGTFVLHNENNTKKGKVKPVHLIDVPGHSRLI 123

Query: 131 AKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVT 190
           +KL+++LP+AA VVFVVDAL+FLPN RAASEYLYDILTNASV+K K PVL+ CNKTDKVT
Sbjct: 124 SKLEEYLPRAAAVVFVVDALEFLPNIRAASEYLYDILTNASVIKNKTPVLLCCNKTDKVT 183

Query: 191 AHTKEFINRQMEKEIDKLRVSRSAISAADITNDFTLGIPGKAFSFTQCHNKVAVAEASGL 250
           AHTKEFI +QMEKEIDKLRVSRSAIS ADI NDFTLGI G+ FSF+ CHNKV VAEASGL
Sbjct: 184 AHTKEFIRKQMEKEIDKLRVSRSAISTADIANDFTLGIEGEVFSFSHCHNKVTVAEASGL 243

Query: 251 TGEVSEVEQFIRENVK 266
           TGE  +V++FIRE+VK
Sbjct: 244 TGETDQVQEFIREHVK 259

[Close]

BLAST of CSPI05G22530.1 vs. TAIR 10
Match: AT5G67560.1 (ADP-ribosylation factor-like A1D )

HSP 1 Score: 47.8 bits (112), Expect = 1.6e-05
Identity = 50/178 (28.09%), Postives = 80/178 (44.94%), Query Frame = 0


Query: 45  LFTTLLLLFTRLFKRRKSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVL 104
           L+  LL     LF +++   + L GL  +GKT L   +  G   +  + ++  N      
Sbjct: 3   LWDALLNWLRSLFFKQEME-LSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTK 62

Query: 105 HSEIAKKDKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYD 164
            S   K        L D+ G  R R+  + +    + +V+VVDA D   N   +   L+D
Sbjct: 63  GSVTIK--------LWDLGGQPRFRSMWERYCRSVSAIVYVVDAAD-PDNLSVSKSELHD 122

Query: 165 ILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQME-KEIDKLRVSRSAISAADITN 222
           +L+  S+    IP+L+L NK DK  A +KE +  +M  K +    V    IS  + TN
Sbjct: 123 LLSKTSL--NGIPLLVLGNKIDKPGALSKEALTDEMGLKSLTDREVCCFMISCKNSTN 168

[Close]

BLAST of CSPI05G22530.1 vs. TAIR 10
Match: AT3G49870.1 (ADP-ribosylation factor-like A1C )

HSP 1 Score: 44.7 bits (104), Expect = 1.4e-04
Identity = 43/157 (27.39%), Postives = 75/157 (47.77%), Query Frame = 0


Query: 44  LLFTTLLLLFTRLFKRRKSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFV 103
           LL   L  L +  FK+    +++  GL  +GKT L   +  G   +  + ++  N     
Sbjct: 3   LLEAFLNWLRSLFFKQEMELSLI--GLQNAGKTSLVNVVATGGYSEDMIPTVGFN----- 62

Query: 104 LHSEIAKKDKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLY 163
              ++ K +    + L D+ G  R R+  + +    + +V+VVDA D   N   +   L+
Sbjct: 63  -MRKVTKGN--VTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAAD-PDNLSVSKSELH 122

Query: 164 DILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM 201
           D+L+  S+    IP+L+L NK DK  A +KE +  +M
Sbjct: 123 DLLSKTSL--NGIPLLVLGNKIDKPGALSKEALTDEM 146

The following BLAST results are available for this feature:

BLAST of CSPI05G22530.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54XX1	2.0e-24	33.50	Signal recognition particle receptor subunit beta OS=Dictyostelium discoideum OX...	[more]
Q4FZX7	1.4e-22	33.19	Signal recognition particle receptor subunit beta OS=Rattus norvegicus OX=10116 ...	[more]
P47758	1.9e-22	33.19	Signal recognition particle receptor subunit beta OS=Mus musculus OX=10090 GN=Sr...	[more]
Q9Y5M8	1.2e-21	33.47	Signal recognition particle receptor subunit beta OS=Homo sapiens OX=9606 GN=SRP...	[more]
P36057	1.8e-09	34.23	Signal recognition particle receptor subunit beta OS=Saccharomyces cerevisiae (s...	[more]

BLAST of CSPI05G22530.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSA6	3.8e-143	99.62	Signal recognition particle receptor subunit beta OS=Cucumis sativus OX=3659 GN=...	[more]
E5GBI2	6.0e-141	98.12	Signal recognition particle receptor subunit beta OS=Cucumis melo subsp. melo OX...	[more]
A0A1S3BEG3	6.0e-141	98.12	Signal recognition particle receptor subunit beta OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1DE59	1.7e-135	93.96	Signal recognition particle receptor subunit beta OS=Momordica charantia OX=3673...	[more]
A0A6J1D1F7	3.8e-135	93.58	Signal recognition particle receptor subunit beta OS=Momordica charantia OX=3673...	[more]

BLAST of CSPI05G22530.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135257.1	7.8e-143	99.62	signal recognition particle receptor subunit beta [Cucumis sativus] >KGN51789.1 ...	[more]
XP_008446189.1	1.2e-140	98.12	PREDICTED: signal recognition particle receptor subunit beta-like [Cucumis melo]...	[more]
XP_038892002.1	2.6e-138	95.49	signal recognition particle receptor subunit beta-like [Benincasa hispida]	[more]
XP_022151281.1	3.5e-135	93.96	signal recognition particle receptor subunit beta-like [Momordica charantia]	[more]
XP_022147102.1	7.8e-135	93.58	signal recognition particle receptor subunit beta-like isoform X1 [Momordica cha...	[more]

BLAST of CSPI05G22530.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05670.2	1.0e-108	75.39	signal recognition particle binding	[more]
AT5G05670.1	1.0e-108	75.39	signal recognition particle binding	[more]
AT2G18770.1	1.1e-107	75.78	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G67560.1	1.6e-05	28.09	ADP-ribosylation factor-like A1D	[more]
AT3G49870.1	1.4e-04	27.39	ADP-ribosylation factor-like A1C	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 4..24
None	No IPR available	PANTHER	PTHR11485	TRANSFERRIN	coord: 5..265
None	No IPR available	PROSITE	PS51417	ARF	coord: 55..266 score: 9.371597
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 57..265 e-value: 1.0E-60 score: 206.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 60..216
IPR019009	Signal recognition particle receptor, beta subunit	PFAM	PF09439	SRPRB	coord: 61..241 e-value: 2.1E-36 score: 125.1
IPR019009	Signal recognition particle receptor, beta subunit	PANTHER	PTHR11485:SF50	P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN	coord: 5..265
IPR019009	Signal recognition particle receptor, beta subunit	CDD	cd04105	SR_beta	coord: 63..262 e-value: 5.42715E-68 score: 207.559

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI05G22530	CSPI05G22530	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI05G22530.1.utr5p1	CSPI05G22530.1.utr5p1	five_prime_UTR
CSPI05G22530.1.utr5p2	CSPI05G22530.1.utr5p2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI05G22530.1.cds2	CSPI05G22530.1.cds2	CDS
CSPI05G22530.1.cds3	CSPI05G22530.1.cds3	CDS
CSPI05G22530.1.cds4	CSPI05G22530.1.cds4	CDS
CSPI05G22530.1.cds5	CSPI05G22530.1.cds5	CDS
CSPI05G22530.1.cds6	CSPI05G22530.1.cds6	CDS
CSPI05G22530.1.cds7	CSPI05G22530.1.cds7	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI05G22530.1.utr3p1	CSPI05G22530.1.utr3p1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI05G22530.1	CSPI05G22530.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045047	protein targeting to ER
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005785	signal recognition particle receptor complex
molecular_function	GO:0005525	GTP binding