CSPI05G12520.1 (mRNA) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTGGACCAGGGGAGCAAGCATTGGATGGCATAGTGATGATAACCGGCCCTATCTAAAACAACGTGAATTTTCTGTATGTGTACCAATCTTTCCTAAGAAAGTTGACGTCATTCTTCCTACTCTGGATAGGCTATTATTTAATTTCAATTGTTGTCTCATATTACTAATATATTTTTTCTACAGTATTTCTCGAGTTTTTCTTTTCAATTTTTCTTTCTGGCAAGGGGAATGGTGGCTTTGTATTTTTTAACAATTCCTTTACCTTCTCTCTGAAATTCATTTGGTATGTCAGCTTTATTATTACAGTACTCTAGCTGATAGTTATCTTCGTGTGTTTGGCAAAAGGCAGTGTGTTACTTGAATAGTTATGGAGTAGAATTTGGAGGTGGACTGTTTCACTTTCAGGATGGGGAACCAGAAACCATCTCACCTTTTTATGGAGTAAGTTAGATGAAGGCTGTTTACCTCCTTGACTTATTGTTATTATTTAATGTTGATGGTACATCGTAACTTTATCTTATCGAAAATGGTACATATGCGATTGCTACCAATCTGAGTTGTAGCTATGCTGGTCAAGACATTATAATGTTGACCAAAAGGTTAAAGGTTTTAATCCTCTCCATATATTGTTGTGCTCGAAAATGGTACATTTTCTATTTTGAACTCTGAAGAATCTGCTTGTGCTCTTTTGAGCCAAGAAGTCTGCAGCATTTTATGGTAAATAGAAAAAATAAGTGGAGCTAGTCCTTTACATTTTGAATCGAGGCCCATGTTTCATTGCTCTTCTTGTTGTTACCTTTCTAATTATTTTAGTAATTATGCCTTATTTATAAATTCTAATCAGTTCTAGTCTTGGGGGATGATGAACTGTTGGGTTTCTTGTTTGATGTCAATATATATAAGTAATGTGGAACAGGGCACATTTTCGGAATTGTTTGATTTTGGTGGTGGATTTTTAATTCATTCGACGGTTTTCCTTTTTACAAGAAATGCTTGCGACTAAATTAGTCTGAATAATTGATGATGTTGGATCATAGTTCCTAGTAGTTTGAAATTTGAAACAATGACAGATCAACTATAGTTAATACTCATTTCACTTTATCAGGATTGTGTGATGTACACGGCTGACAATGACAATGTTCATTCTGTTGATGAGGTATGCCCAAGCACTGAGACCCTCTGAATCTGTGTGAAACCATTTTACAAAAAGGAAAACCGTTTGATAGACTAATCACAGCCTTTCTAAAATTAATGCTAAATATTGGCTAGGCAAAAAGATGTTGCATCCGTTCACTGAGTTTATATTTTAATATAATGGAGTAATTTCATGTACATCCATGACCCACAAGTCCAGTTACCACTATCATTTTAAGATATCAGTGGATAACAAAAAGTGTCTAATTGTTTCTAGAACTTCTATAGGTGCTTGTAAAGAAGATCGCAATTCTTAATTTCTTAACTTGGAGACAGCAACACATGCTTGTTGACCCTTTCTGGATGCGGCTCTAAATGAGGCTAAGCCTCGATGCCTAGTGTTTGATAGACTAATCACAGCCTTTCTAAAATTAATTGGCATCAGTAGGATGAGGATCATATACAAAAAATTGCTCTTCACAGTTAACACAAACATTTTCTTAATATAAGCAATTAATGGGTGGGGATCTGAACTTTGATCGATTCTTTAACCCAAACCAAATCTTAGTCAAGTTTTCTATTGAGTCTTTTTTTGGTTATTTTTTGGAAAGCAAGATAAATAGGAGCACATTAATTCTTTCTTGCTTTTTTGCTTTTTACAGGTAACTGAGGAATCATGCATTTGATTAATCCTCAAGAGAGTTGCTAGTAGACCTCTTAGCACAGTTGTTCTTCATCTTGCTTACTTCATGGTTTCCTTGGATAGATAACCAATGGAGAAAGGCTTACACTGACATTATGGTTCACCCGTGATAGCTCTCATGATGAAGATGCAAAACTTCTTTCCCTTCTTTCACAAAGCCCTTTACATGATCGTTTTCCTGACTCGTGCCTCCCTCAGCCTCCGTCCTGTAATATGTATTGGTTTTCACCAGAAGACGATCCAAATTTCAAGTTTGGTTTTGATATATGCTGGGCGAGACTGCGTGCGCTTGGATACGACCTCTATTTTCCTGGGGACCATGATTTTTCAGAGTATCCAGATTTATTCTTTCAGGACGTACAATTAGTGTGGGGAGATAAGATATTCTTTCAGAAATTTGAGAACATTTTGCATTTGCTTCAGGTATTCCATCGAAATTACCCTTTAACATTTATTTCCCCTTCTGGTTATAGGGGAAACTGGGGGATTGTAGTGTGACGAAAAACATGCTATATCATCAATCGTGAAAGGCTACTTTGAATAACTTGCTTTGTTTTATAGGGTTTTCTCATTGAAAAATTCTACTGAAACTAAAAGTAAATTGCGTTTACTACATATGCTTAATGGTTAAACAGGTAGTGCAGTTCCTGTGTTGGAAAGGCAAAGAGCTGGATTCTACCAACCTCAGTGAGGATTCGAGCTATGCAGAATATTTATCCCCAAAGAGAAATGTGGGAGTCAGTTACTTTAAATCTGAGTTTTCGAAGAACGATGGGTTGGCCGAATCGGTCTTCTCATCTGCTGCATCTGATGGCAAGGAGAACCAGCAATGGTTGGGGTGGGATAAGCTTGTTGCTGCAGCAGCAGCTTGGGAACATTATGCTTCCATTTTAAGGAGAGAACTCCTTGGAAGCTTCAGCCATTGGAGGAATTGCCAATCCATATACAGTGTTTCACTTGATAGCTGAATAGCCCAAATACTTAAACTAGCAGTAGCTTCGAGG CTGGACCAGGGGAGCAAGCATTGGATGGCATAGTGATGATAACCGGCCCTATCTAAAACAACGTGAATTTTCTGCAGTGTGTTACTTGAATAGTTATGGAGTAGAATTTGGAGGTGGACTGTTTCACTTTCAGGATGGGGAACCAGAAACCATCTCACCTTTTTATGGAGATTGTGTGATGTACACGGCTGACAATGACAATGTTCATTCTGTTGATGAGATAACCAATGGAGAAAGGCTTACACTGACATTATGGTTCACCCGTGATAGCTCTCATGATGAAGATGCAAAACTTCTTTCCCTTCTTTCACAAAGCCCTTTACATGATCGTTTTCCTGACTCGTGCCTCCCTCAGCCTCCGTCCTGTAATATGTATTGGTTTTCACCAGAAGACGATCCAAATTTCAAGTTTGGTTTTGATATATGCTGGGCGAGACTGCGTGCGCTTGGATACGACCTCTATTTTCCTGGGGACCATGATTTTTCAGAGTATCCAGATTTATTCTTTCAGGACGTACAATTAGTGTGGGGAGATAAGATATTCTTTCAGAAATTTGAGAACATTTTGCATTTGCTTCAGGTAGTGCAGTTCCTGTGTTGGAAAGGCAAAGAGCTGGATTCTACCAACCTCAGTGAGGATTCGAGCTATGCAGAATATTTATCCCCAAAGAGAAATGTGGGAGTCAGTTACTTTAAATCTGAGTTTTCGAAGAACGATGGGTTGGCCGAATCGGTCTTCTCATCTGCTGCATCTGATGGCAAGGAGAACCAGCAATGGTTGGGGTGGGATAAGCTTGTTGCTGCAGCAGCAGCTTGGGAACATTATGCTTCCATTTTAAGGAGAGAACTCCTTGGAAGCTTCAGCCATTGGAGGAATTGCCAATCCATATACAGTGTTTCACTTGATAGCTGAATAGCCCAAATACTTAAACTAGCAGTAGCTTCGAGG TGGACCAGGGGAGCAAGCATTGGATGGCATAGTGATGATAACCGGCCCTATCTAAAACAACGTGAATTTTCTGCAGTGTGTTACTTGAATAGTTATGGAGTAGAATTTGGAGGTGGACTGTTTCACTTTCAGGATGGGGAACCAGAAACCATCTCACCTTTTTATGGAGATTGTGTGATGTACACGGCTGACAATGACAATGTTCATTCTGTTGATGAGATAACCAATGGAGAAAGGCTTACACTGACATTATGGTTCACCCGTGATAGCTCTCATGATGAAGATGCAAAACTTCTTTCCCTTCTTTCACAAAGCCCTTTACATGATCGTTTTCCTGACTCGTGCCTCCCTCAGCCTCCGTCCTGTAATATGTATTGGTTTTCACCAGAAGACGATCCAAATTTCAAGTTTGGTTTTGATATATGCTGGGCGAGACTGCGTGCGCTTGGATACGACCTCTATTTTCCTGGGGACCATGATTTTTCAGAGTATCCAGATTTATTCTTTCAGGACGTACAATTAGTGTGGGGAGATAAGATATTCTTTCAGAAATTTGAGAACATTTTGCATTTGCTTCAGGTAGTGCAGTTCCTGTGTTGGAAAGGCAAAGAGCTGGATTCTACCAACCTCAGTGAGGATTCGAGCTATGCAGAATATTTATCCCCAAAGAGAAATGTGGGAGTCAGTTACTTTAAATCTGAGTTTTCGAAGAACGATGGGTTGGCCGAATCGGTCTTCTCATCTGCTGCATCTGATGGCAAGGAGAACCAGCAATGGTTGGGGTGGGATAAGCTTGTTGCTGCAGCAGCAGCTTGGGAACATTATGCTTCCATTTTAAGGAGAGAACTCCTTGGAAGCTTCAGCCATTGGAGGAATTGCCAATCCATATACAGTGTTTCACTTGATAGCTGA WTRGASIGWHSDDNRPYLKQREFSAVCYLNSYGVEFGGGLFHFQDGEPETISPFYGDCVMYTADNDNVHSVDEITNGERLTLTLWFTRDSSHDEDAKLLSLLSQSPLHDRFPDSCLPQPPSCNMYWFSPEDDPNFKFGFDICWARLRALGYDLYFPGDHDFSEYPDLFFQDVQLVWGDKIFFQKFENILHLLQVVQFLCWKGKELDSTNLSEDSSYAEYLSPKRNVGVSYFKSEFSKNDGLAESVFSSAASDGKENQQWLGWDKLVAAAAAWEHYASILRRELLGSFSHWRNCQSIYSVSLDS* Homology
BLAST of CSPI05G12520.1 vs. ExPASy Swiss-Prot
Match: Q5XGE0 (2-oxoglutarate and iron-dependent oxygenase domain-containing protein 3 OS=Xenopus tropicalis OX=8364 GN=ogfod3 PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 3.3e-07 Identity = 26/85 (30.59%), Postives = 48/85 (56.47%), Query Frame = 0
BLAST of CSPI05G12520.1 vs. ExPASy TrEMBL
Match: A0A0A0KMN7 (Procollagen-proline 3-dioxygenase OS=Cucumis sativus OX=3659 GN=Csa_5G289640 PE=3 SV=1) HSP 1 Score: 648.3 bits (1671), Expect = 1.6e-182 Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0
BLAST of CSPI05G12520.1 vs. ExPASy TrEMBL
Match: A0A5D3CRE9 (Procollagen-proline 3-dioxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G001030 PE=3 SV=1) HSP 1 Score: 617.8 bits (1592), Expect = 2.3e-173 Identity = 290/304 (95.39%), Postives = 295/304 (97.04%), Query Frame = 0
BLAST of CSPI05G12520.1 vs. ExPASy TrEMBL
Match: A0A5A7SSL8 (Procollagen-proline 3-dioxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold452G001280 PE=3 SV=1) HSP 1 Score: 615.5 bits (1586), Expect = 1.2e-172 Identity = 289/304 (95.07%), Postives = 295/304 (97.04%), Query Frame = 0
BLAST of CSPI05G12520.1 vs. ExPASy TrEMBL
Match: A0A1S3C486 (Procollagen-proline 3-dioxygenase OS=Cucumis melo OX=3656 GN=LOC103496668 PE=3 SV=1) HSP 1 Score: 615.5 bits (1586), Expect = 1.2e-172 Identity = 289/304 (95.07%), Postives = 295/304 (97.04%), Query Frame = 0
BLAST of CSPI05G12520.1 vs. ExPASy TrEMBL
Match: A0A1S3C4U3 (uncharacterized protein LOC103496668 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496668 PE=4 SV=1) HSP 1 Score: 528.5 bits (1360), Expect = 1.9e-146 Identity = 257/304 (84.54%), Postives = 263/304 (86.51%), Query Frame = 0
BLAST of CSPI05G12520.1 vs. NCBI nr
Match: XP_004140463.1 (prolyl 3-hydroxylase 1 [Cucumis sativus] >KAE8648112.1 hypothetical protein Csa_004690 [Cucumis sativus]) HSP 1 Score: 648.3 bits (1671), Expect = 3.3e-182 Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0
BLAST of CSPI05G12520.1 vs. NCBI nr
Match: TYK14443.1 (prolyl 3-hydroxylase 1 [Cucumis melo var. makuwa]) HSP 1 Score: 617.8 bits (1592), Expect = 4.8e-173 Identity = 290/304 (95.39%), Postives = 295/304 (97.04%), Query Frame = 0
BLAST of CSPI05G12520.1 vs. NCBI nr
Match: XP_008456831.1 (PREDICTED: uncharacterized protein LOC103496668 isoform X1 [Cucumis melo] >KAA0032195.1 prolyl 3-hydroxylase 1 [Cucumis melo var. makuwa]) HSP 1 Score: 615.5 bits (1586), Expect = 2.4e-172 Identity = 289/304 (95.07%), Postives = 295/304 (97.04%), Query Frame = 0
BLAST of CSPI05G12520.1 vs. NCBI nr
Match: XP_038893062.1 (uncharacterized protein LOC120081945 [Benincasa hispida] >XP_038893063.1 uncharacterized protein LOC120081945 [Benincasa hispida]) HSP 1 Score: 571.6 bits (1472), Expect = 4.0e-159 Identity = 271/303 (89.44%), Postives = 282/303 (93.07%), Query Frame = 0
BLAST of CSPI05G12520.1 vs. NCBI nr
Match: XP_008456833.1 (PREDICTED: uncharacterized protein LOC103496668 isoform X2 [Cucumis melo]) HSP 1 Score: 528.5 bits (1360), Expect = 3.9e-146 Identity = 257/304 (84.54%), Postives = 263/304 (86.51%), Query Frame = 0
BLAST of CSPI05G12520.1 vs. TAIR 10
Match: AT1G68080.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 285.0 bits (728), Expect = 6.9e-77 Identity = 147/305 (48.20%), Postives = 196/305 (64.26%), Query Frame = 0
BLAST of CSPI05G12520.1 vs. TAIR 10
Match: AT1G68080.3 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 243.0 bits (619), Expect = 3.0e-64 Identity = 132/305 (43.28%), Postives = 181/305 (59.34%), Query Frame = 0
BLAST of CSPI05G12520.1 vs. TAIR 10
Match: AT1G68080.2 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 203.0 bits (515), Expect = 3.5e-52 Identity = 117/304 (38.49%), Postives = 164/304 (53.95%), Query Frame = 0
BLAST of CSPI05G12520.1 vs. TAIR 10
Match: AT1G68080.4 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 192.2 bits (487), Expect = 6.1e-49 Identity = 106/246 (43.09%), Postives = 148/246 (60.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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