CSPI05G06270.2 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI05G06270.2
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	protein cornichon homolog 4-like
Location	Chr5: 5655372 .. 5657215 (-)
Sequence length	857
RNA-Seq Expression	CSPI05G06270.2
Synteny	CSPI05G06270.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCTAGTTCTGTAGAATTGATGTCTTAATTCTCGAAGTATGTCTTATATATGAATATTTGAATTAGCATATATTGTTGTTAATTGCCTAATATCATTGGTGAAAGTGAAACAATGTTGGAACTATGGAACTTATGATACTTTTGAAACTTGTTGCAGCTAATGTGCCTAGCTGATCTTGAGTTTGATTATATCAACCCTTACGACTCCTCATCACGGATAAACAAAGTAGTTGTGCCTGAGTTCATCACCCAAGGAGTCTTGTGCATCTTCTATCTCTTGTCAGGGCATTGGGTTATGTCATTATTGTGTATGCCGTGCCTTTATTATAATTTACGAATGTAAGTTTCTCTATTTCTTTCGTCTTTGATCGGACTTTTTACTATTAGAGATATAGATGCATAATATTTAGTGGGCTGTACGTACTATCCTCATGTTGGTTCCCAATTTGAGCTATCTGAATTTCATATTCTATCCTCTGGATTCCAAATGAAAAATGAAATGTGTATATTTTGAATGAAGGGGCTTGCCTATCTCTTCTTATATGCCCGGGTAAGTTGGTAACACTTAGTAGCCAAGTCCTGTTGAGTGGATAGCGGGTGAAAGCATCTACGTACTGAATTTTACAACCTTTCCTTTTAAATGTATGAATTGCTTGTAATTGCAGTGGTAACACTTTTAGGGATAATAATTTAGTGTATGGTAACATTTATAAAGAATTAGAAATATAACAAAATCTATTAGTGATATACTATATCGTTGATAGATTTCTTCCAGTGATATGGTCTATTATTGATAGACTCCCACCAATGATGTGGTTTATCATTGATACTCTTTGGGAACTAGATCTAAATTTTGCCATATTTTCAAATTATTTTGTGTTGTGCTATATCTACAAATACTTTGGAACTAATTGCTACATTTGCAATTGTCAAAGCACCTAAAATTTCTGAGATTTAGATTAATAGTGTTAGTTTTCAGATAAGTTAATCTTTTGGGATGGTTAAGAATGTAAAGGACTAGGGACGTCTCATGGACAATCCCTTTGAACTTTCACACTACAGTTCTGTGACTGGAACTTGAATGGATATCATTTGAGATAAGCCAAACTTTCGTATTTGAGATTGGGTTAGTGGCACGTATGGTTTATTACGTGACTTGTTTGTTGTTGGTAATTCTTCATGCCAAGCTTAAATCCGTCTAATGTGTGTTTTCTCATGATTTAGGTACACTCAACGAAAACACTTGGTAGATGTTACTGAGATATTTAATCAGTTACCTTGGGAAAAGAAGCAAAGGCTTTTCAAACTTGTCTATCTTGTTTCTCTTCTCTTTCTTTCCATATTTTGGTAATCCAATTGAAGAGAGCGTTTTCAAAGTTTGAGATCTTATTGTTGACATCATTTGTTTTAATCATTGTCTTCTCTCTTCTTTGTTTCTCCAATTTGCAGGTTAATTTACAGCGCGTTGGAGGATCACGAGTCTTGAATAGATTCTGCAAAGTGCAAATTGTTGTCTTGTAGGAGATAATGCCACTGTGCGGCTCACTACAAAGCTTTGTGTAAAACTTGTCTTAGGGTATCTTCTTTGTGTTGTAATTTTTGACAAATAATTGCCTTGTGAGTAAGGTCTAAAGGTTTTGATAGCCACCAAATGCTGCCCCTGTTTTGCAGTGATGTCTATAAACGAAAATTTTAAAAACTATAAAGATGAGATTCTTGTTACGTTTAGAGAAAGCCTTTAACATGATGTAAGAGAATAGAGTTTGTTTATGGACCGAAGACGTATTTGCATTTGTCAAAAAAATCACTTTTTTATGTTAATTATGTAAGAATTTTAGGAAGAA

mRNA sequence

GGCTAGTTCTGTAGAATTGATGTCTTAATTCTCGAAGTATGTCTTATATATGAATATTTGAATTAGCATATATTGTTGTTAATTGCCTAATATCATTGGTGAAAGTGAAACAATGTTGGAACTATGGAACTTATGATACTTTTGAAACTTGTTGCAGCTAATGTGCCTAGCTGATCTTGAGTTTGATTATATCAACCCTTACGACTCCTCATCACGGATAAACAAAGTAGTTGTGCCTGAGTTCATCACCCAAGGAGTCTTGTGCATCTTCTATCTCTTGTCAGGGCATTGGGTTATGTCATTATTGTGTATGCCGTGCCTTTATTATAATTTACGAATGTACACTCAACGAAAACACTTGGTAGATGTTACTGAGATATTTAATCAGTTACCTTGGGAAAAGAAGCAAAGGCTTTTCAAACTTGTCTATCTTGTTTCTCTTCTCTTTCTTTCCATATTTTGGTTAATTTACAGCGCGTTGGAGGATCACGAGTCTTGAATAGATTCTGCAAAGTGCAAATTGTTGTCTTGTAGGAGATAATGCCACTGTGCGGCTCACTACAAAGCTTTGTGTAAAACTTGTCTTAGGGTATCTTCTTTGTGTTGTAATTTTTGACAAATAATTGCCTTGTGAGTAAGGTCTAAAGGTTTTGATAGCCACCAAATGCTGCCCCTGTTTTGCAGTGATGTCTATAAACGAAAATTTTAAAAACTATAAAGATGAGATTCTTGTTACGTTTAGAGAAAGCCTTTAACATGATGTAAGAGAATAGAGTTTGTTTATGGACCGAAGACGTATTTGCATTTGTCAAAAAAATCACTTTTTTATGTTAATTATGTAAGAATTTTAGGAAGAA

Coding sequence (CDS)

ATGTGCCTAGCTGATCTTGAGTTTGATTATATCAACCCTTACGACTCCTCATCACGGATAAACAAAGTAGTTGTGCCTGAGTTCATCACCCAAGGAGTCTTGTGCATCTTCTATCTCTTGTCAGGGCATTGGGTTATGTCATTATTGTGTATGCCGTGCCTTTATTATAATTTACGAATGTACACTCAACGAAAACACTTGGTAGATGTTACTGAGATATTTAATCAGTTACCTTGGGAAAAGAAGCAAAGGCTTTTCAAACTTGTCTATCTTGTTTCTCTTCTCTTTCTTTCCATATTTTGGTTAATTTACAGCGCGTTGGAGGATCACGAGTCTTGA

Protein sequence

MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHES*

Homology

[Close]

BLAST of CSPI05G06270.2 vs. ExPASy Swiss-Prot
Match: Q3EDD7 (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12340 PE=2 SV=2)

HSP 1 Score: 183.3 bits (464), Expect = 1.5e-45
Identity = 83/111 (74.77%), Postives = 100/111 (90.09%), Query Frame = 0


Query: 1   MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLRM 60
           +CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC+FYLL+GHW M+LLC+P LYYN  +
Sbjct: 18  VCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFHL 77

Query: 61  YTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHE 112
           Y++R+HLVDVTEIFN L WEKK+RLFKL Y+V  LFL+IFW+IYSAL+D+E
Sbjct: 78  YSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDDYE 128

[Close]

BLAST of CSPI05G06270.2 vs. ExPASy Swiss-Prot
Match: Q84W04 (Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.5e-45
Identity = 83/111 (74.77%), Postives = 100/111 (90.09%), Query Frame = 0


Query: 1   MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLRM 60
           +CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC+FYLL+GHW M+LLC+P LYYN  +
Sbjct: 26  VCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFHL 85

Query: 61  YTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHE 112
           Y++R+HLVDVTEIFN L WEKK+RLFKL Y+V  LFL+IFW+IYSAL+D+E
Sbjct: 86  YSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDDYE 136

[Close]

BLAST of CSPI05G06270.2 vs. ExPASy Swiss-Prot
Match: Q8GWT5 (Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.7e-41
Identity = 76/109 (69.72%), Postives = 95/109 (87.16%), Query Frame = 0


Query: 3   LADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLRMYT 62
           LADLEFDYINPYDS+SRIN VV+PE I QG LC+FYL++GHW M+LLC+P LYYN  +Y+
Sbjct: 28  LADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVTGHWFMALLCVPYLYYNFHLYS 87

Query: 63  QRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHE 112
           +++HL+DVTEIFN L WEKK+RLFKL Y++  LFL+IFWLIYS L+D+E
Sbjct: 88  RKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTLFLTIFWLIYSTLDDYE 136

[Close]

BLAST of CSPI05G06270.2 vs. ExPASy Swiss-Prot
Match: Q9SZ74 (Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV=2)

HSP 1 Score: 141.0 bits (354), Expect = 8.4e-33
Identity = 60/108 (55.56%), Postives = 90/108 (83.33%), Query Frame = 0


Query: 2   CLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLRMY 61
           CLADLEFD INPYD SSRIN++V+PEF  QG+LC++Y+L+GHW M++L +P L+YN+R+Y
Sbjct: 27  CLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLYYILTGHWFMAVLSLPHLFYNIRLY 86

Query: 62  TQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALED 110
            +R+HL DVTE++N   WE+K+R++K+ ++   +F++ +WLI+SAL D
Sbjct: 87  MKREHLADVTELYNTNKWEQKKRVYKIGHIALSIFITTYWLIHSALGD 134

[Close]

BLAST of CSPI05G06270.2 vs. ExPASy Swiss-Prot
Match: Q9C7D7 (Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 7.2e-24
Identity = 52/115 (45.22%), Postives = 80/115 (69.57%), Query Frame = 0


Query: 1   MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLRM 60
           +CL DLE DY+NP+++S+RIN++V+PEFI QG LC+ +LL+ HWV  L+ +P   Y+  +
Sbjct: 27  ICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLLFLLTWHWVFFLVAVPVTVYHAML 86

Query: 61  YTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWL----IYSALEDHE 112
           Y +R++L+DVTE+F  + +EKK R  KL + V L  + +F L    +YS  ED +
Sbjct: 87  YKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFLFIMVVFRLTLSAVYSFTEDDD 141

[Close]

BLAST of CSPI05G06270.2 vs. ExPASy TrEMBL
Match: A0A0A0KMS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157960 PE=3 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 7.9e-58
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLRM 60
           MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLRM
Sbjct: 26  MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLRM 85

Query: 61  YTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHES 113
           YTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHES
Sbjct: 86  YTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHES 137

[Close]

BLAST of CSPI05G06270.2 vs. ExPASy TrEMBL
Match: A0A1S3ATW1 (protein cornichon homolog 4-like OS=Cucumis melo OX=3656 GN=LOC103482667 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 6.7e-57
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLRM 60
           MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNL+M
Sbjct: 26  MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLKM 85

Query: 61  YTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHES 113
           YTQR HLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHES
Sbjct: 86  YTQRNHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHES 137

[Close]

BLAST of CSPI05G06270.2 vs. ExPASy TrEMBL
Match: A0A6J1E8A9 (protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111430316 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 5.3e-54
Identity = 103/112 (91.96%), Postives = 110/112 (98.21%), Query Frame = 0


Query: 1   MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLRM 60
           MCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCIFYLL+GHW+MSL C+P LYYN+R+
Sbjct: 26  MCLADLEFDYINPYDSSSRINKVVMPEFITQGVLCIFYLLTGHWIMSLFCVPYLYYNIRL 85

Query: 61  YTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHES 113
           YTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSL+FLSIFWLIYSALEDHES
Sbjct: 86  YTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLIFLSIFWLIYSALEDHES 137

[Close]

BLAST of CSPI05G06270.2 vs. ExPASy TrEMBL
Match: A0A6J1K131 (protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111491445 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.5e-53
Identity = 102/112 (91.07%), Postives = 109/112 (97.32%), Query Frame = 0


Query: 1   MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLRM 60
           MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLL+GHW+MS  C+P LYYNLR+
Sbjct: 26  MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLTGHWIMSFFCLPYLYYNLRL 85

Query: 61  YTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHES 113
           YTQRKHLVDVTEIFNQLPWEKK+RLFKLVYL+SLLFLSIFWLIYSALEDH+S
Sbjct: 86  YTQRKHLVDVTEIFNQLPWEKKRRLFKLVYLISLLFLSIFWLIYSALEDHDS 137

[Close]

BLAST of CSPI05G06270.2 vs. ExPASy TrEMBL
Match: A0A6J1H2W0 (protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111459200 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 7.6e-53
Identity = 100/112 (89.29%), Postives = 109/112 (97.32%), Query Frame = 0


Query: 1   MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLRM 60
           MCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCIFYLL+GHW+MS  C+P LYYNLR+
Sbjct: 26  MCLADLEFDYINPYDSSSRINKVVIPEFITQGVLCIFYLLTGHWIMSFFCVPYLYYNLRL 85

Query: 61  YTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHES 113
           YTQR+HLVDVTEIFNQLPWEKK+RLFKLVYL+SLLFLSIFWLIYSALEDH+S
Sbjct: 86  YTQREHLVDVTEIFNQLPWEKKRRLFKLVYLISLLFLSIFWLIYSALEDHDS 137

[Close]

BLAST of CSPI05G06270.2 vs. NCBI nr
Match: XP_004147569.1 (protein cornichon homolog 4 [Cucumis sativus] >KGN50189.1 hypothetical protein Csa_000315 [Cucumis sativus])

HSP 1 Score: 232.6 bits (592), Expect = 1.6e-57
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLRM 60
           MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLRM
Sbjct: 26  MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLRM 85

Query: 61  YTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHES 113
           YTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHES
Sbjct: 86  YTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHES 137

[Close]

BLAST of CSPI05G06270.2 vs. NCBI nr
Match: XP_008437159.1 (PREDICTED: protein cornichon homolog 4-like [Cucumis melo])

HSP 1 Score: 229.6 bits (584), Expect = 1.4e-56
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLRM 60
           MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNL+M
Sbjct: 26  MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLKM 85

Query: 61  YTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHES 113
           YTQR HLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHES
Sbjct: 86  YTQRNHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHES 137

[Close]

BLAST of CSPI05G06270.2 vs. NCBI nr
Match: XP_038907022.1 (protein cornichon homolog 4-like [Benincasa hispida])

HSP 1 Score: 223.4 bits (568), Expect = 9.9e-55
Identity = 106/112 (94.64%), Postives = 110/112 (98.21%), Query Frame = 0


Query: 1   MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLRM 60
           MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHW+MSL C+P LYYNLR+
Sbjct: 26  MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCIPYLYYNLRL 85

Query: 61  YTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHES 113
           YTQRKHLVDVTEIFNQLPWEKKQRLFKL+YLVSLLFLSIFWLIYSALEDHES
Sbjct: 86  YTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSIFWLIYSALEDHES 137

[Close]

BLAST of CSPI05G06270.2 vs. NCBI nr
Match: XP_022922295.1 (protein cornichon homolog 4-like [Cucurbita moschata] >XP_023551139.1 protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo] >KAG6579448.1 Protein cornichon-like 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016921.1 Protein cornichon-like 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 219.9 bits (559), Expect = 1.1e-53
Identity = 103/112 (91.96%), Postives = 110/112 (98.21%), Query Frame = 0


Query: 1   MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLRM 60
           MCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCIFYLL+GHW+MSL C+P LYYN+R+
Sbjct: 26  MCLADLEFDYINPYDSSSRINKVVMPEFITQGVLCIFYLLTGHWIMSLFCVPYLYYNIRL 85

Query: 61  YTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHES 113
           YTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSL+FLSIFWLIYSALEDHES
Sbjct: 86  YTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLIFLSIFWLIYSALEDHES 137

[Close]

BLAST of CSPI05G06270.2 vs. NCBI nr
Match: XP_022996131.1 (protein cornichon homolog 4-like [Cucurbita maxima] >XP_022996132.1 protein cornichon homolog 4-like [Cucurbita maxima])

HSP 1 Score: 218.4 bits (555), Expect = 3.2e-53
Identity = 102/112 (91.07%), Postives = 109/112 (97.32%), Query Frame = 0


Query: 1   MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLRM 60
           MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLL+GHW+MS  C+P LYYNLR+
Sbjct: 26  MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLTGHWIMSFFCLPYLYYNLRL 85

Query: 61  YTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHES 113
           YTQRKHLVDVTEIFNQLPWEKK+RLFKLVYL+SLLFLSIFWLIYSALEDH+S
Sbjct: 86  YTQRKHLVDVTEIFNQLPWEKKRRLFKLVYLISLLFLSIFWLIYSALEDHDS 137

[Close]

BLAST of CSPI05G06270.2 vs. TAIR 10
Match: AT1G12340.1 (Cornichon family protein )

HSP 1 Score: 183.3 bits (464), Expect = 1.1e-46
Identity = 83/111 (74.77%), Postives = 100/111 (90.09%), Query Frame = 0


Query: 1   MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLRM 60
           +CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC+FYLL+GHW M+LLC+P LYYN  +
Sbjct: 18  VCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFHL 77

Query: 61  YTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHE 112
           Y++R+HLVDVTEIFN L WEKK+RLFKL Y+V  LFL+IFW+IYSAL+D+E
Sbjct: 78  YSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDDYE 128

[Close]

BLAST of CSPI05G06270.2 vs. TAIR 10
Match: AT1G12390.1 (Cornichon family protein )

HSP 1 Score: 183.3 bits (464), Expect = 1.1e-46
Identity = 83/111 (74.77%), Postives = 100/111 (90.09%), Query Frame = 0


Query: 1   MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLRM 60
           +CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC+FYLL+GHW M+LLC+P LYYN  +
Sbjct: 26  VCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFHL 85

Query: 61  YTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHE 112
           Y++R+HLVDVTEIFN L WEKK+RLFKL Y+V  LFL+IFW+IYSAL+D+E
Sbjct: 86  YSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDDYE 136

[Close]

BLAST of CSPI05G06270.2 vs. TAIR 10
Match: AT1G62880.1 (Cornichon family protein )

HSP 1 Score: 169.9 bits (429), Expect = 1.2e-42
Identity = 76/109 (69.72%), Postives = 95/109 (87.16%), Query Frame = 0


Query: 3   LADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLRMYT 62
           LADLEFDYINPYDS+SRIN VV+PE I QG LC+FYL++GHW M+LLC+P LYYN  +Y+
Sbjct: 28  LADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVTGHWFMALLCVPYLYYNFHLYS 87

Query: 63  QRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHE 112
           +++HL+DVTEIFN L WEKK+RLFKL Y++  LFL+IFWLIYS L+D+E
Sbjct: 88  RKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTLFLTIFWLIYSTLDDYE 136

[Close]

BLAST of CSPI05G06270.2 vs. TAIR 10
Match: AT4G12090.1 (Cornichon family protein )

HSP 1 Score: 141.0 bits (354), Expect = 6.0e-34
Identity = 60/108 (55.56%), Postives = 90/108 (83.33%), Query Frame = 0


Query: 2   CLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLRMY 61
           CLADLEFD INPYD SSRIN++V+PEF  QG+LC++Y+L+GHW M++L +P L+YN+R+Y
Sbjct: 27  CLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLYYILTGHWFMAVLSLPHLFYNIRLY 86

Query: 62  TQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALED 110
            +R+HL DVTE++N   WE+K+R++K+ ++   +F++ +WLI+SAL D
Sbjct: 87  MKREHLADVTELYNTNKWEQKKRVYKIGHIALSIFITTYWLIHSALGD 134

[Close]

BLAST of CSPI05G06270.2 vs. TAIR 10
Match: AT3G12180.1 (Cornichon family protein )

HSP 1 Score: 111.3 bits (277), Expect = 5.1e-25
Identity = 52/115 (45.22%), Postives = 80/115 (69.57%), Query Frame = 0


Query: 1   MCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLRM 60
           +CL DLE DY+NP+++S+RIN++V+PEFI QG LC+ +LL+ HWV  L+ +P   Y+  +
Sbjct: 27  ICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLLFLLTWHWVFFLVAVPVTVYHAML 86

Query: 61  YTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWL----IYSALEDHE 112
           Y +R++L+DVTE+F  + +EKK R  KL + V L  + +F L    +YS  ED +
Sbjct: 87  YKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFLFIMVVFRLTLSAVYSFTEDDD 141

The following BLAST results are available for this feature:

BLAST of CSPI05G06270.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3EDD7	1.5e-45	74.77	Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g1234...	[more]
Q84W04	1.5e-45	74.77	Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV...	[more]
Q8GWT5	1.7e-41	69.72	Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV...	[more]
Q9SZ74	8.4e-33	55.56	Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV...	[more]
Q9C7D7	7.2e-24	45.22	Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV...	[more]

BLAST of CSPI05G06270.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMS0	7.9e-58	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157960 PE=3 SV=1	[more]
A0A1S3ATW1	6.7e-57	98.21	protein cornichon homolog 4-like OS=Cucumis melo OX=3656 GN=LOC103482667 PE=3 SV...	[more]
A0A6J1E8A9	5.3e-54	91.96	protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111430316 P...	[more]
A0A6J1K131	1.5e-53	91.07	protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111491445 PE=...	[more]
A0A6J1H2W0	7.6e-53	89.29	protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111459200 P...	[more]

BLAST of CSPI05G06270.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147569.1	1.6e-57	100.00	protein cornichon homolog 4 [Cucumis sativus] >KGN50189.1 hypothetical protein C...	[more]
XP_008437159.1	1.4e-56	98.21	PREDICTED: protein cornichon homolog 4-like [Cucumis melo]	[more]
XP_038907022.1	9.9e-55	94.64	protein cornichon homolog 4-like [Benincasa hispida]	[more]
XP_022922295.1	1.1e-53	91.96	protein cornichon homolog 4-like [Cucurbita moschata] >XP_023551139.1 protein co...	[more]
XP_022996131.1	3.2e-53	91.07	protein cornichon homolog 4-like [Cucurbita maxima] >XP_022996132.1 protein corn...	[more]

BLAST of CSPI05G06270.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12340.1	1.1e-46	74.77	Cornichon family protein	[more]
AT1G12390.1	1.1e-46	74.77	Cornichon family protein	[more]
AT1G62880.1	1.2e-42	69.72	Cornichon family protein	[more]
AT4G12090.1	6.0e-34	55.56	Cornichon family protein	[more]
AT3G12180.1	5.1e-25	45.22	Cornichon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003377	Cornichon	SMART	SM01398	Cornichon_2	coord: 1..100 e-value: 2.6E-42 score: 156.5
IPR003377	Cornichon	PFAM	PF03311	Cornichon	coord: 1..100 e-value: 3.3E-37 score: 127.5
None	No IPR available	PANTHER	PTHR12290:SF25	PROTEIN CORNICHON-LIKE PROTEIN 4	coord: 1..110
None	No IPR available	PANTHER	PTHR12290	CORNICHON-RELATED	coord: 1..110

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI05G06270	CSPI05G06270	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI05G06270.2.utr3p1	CSPI05G06270.2.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI05G06270.2.cds3	CSPI05G06270.2.cds3	CDS
CSPI05G06270.2.cds2	CSPI05G06270.2.cds2	CDS
CSPI05G06270.2.cds1	CSPI05G06270.2.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI05G06270.2.utr5p1	CSPI05G06270.2.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI05G06270.2	CSPI05G06270.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016021	integral component of membrane