CSPI04G18710.1 (mRNA) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATATTTTTTGGAAAAATAATGATATTATAATTTATTCTCACCCAAAAAAACCCAACCTTTGTGGCGTCTTCCACTTCCTTCTTCTCTCTTCTCTACCCTTATCTCTCTCTCTCTTTTTGTAAATTCTCTCATGGCGACCCTTCTCAGAACTCCATTTTTTCAGGCAACTCCTCCCGCCAGCGTTTCCGCCTTTTCCTTATCCAAATCCACCCTAAAACCCTCTTCTTTATCCTTTACAACATCTCACTCCTTCATTTGTTGCTTCAACTCCTCCAAGTTTTCAACTCGTCCTCCTTCTCTCCGGTTCCCCAAGCGGCCTTTTGCTTCCTCCGGTGAAACGGAAATTAGCGAGCTTGAAGAGGAAGTTCGCGATTCTGAGGCGGAGGTACTCTTAATTCTTCTTCTTCTGGGAGTTGCTGTTTCTTTACCCTACTTTTGTAGTTTGACTCTTTAGTTGGTTAGGTTAGATAGTGTTGGTGGGTCTGGGTATTCCTTTATGCTGTGCAATTGGTTGGAATAGGATCTCATTGTTATTATCTAATGTTATCAATTGGGCGTTGGAGTGGAGGTGGTTGCTTCTTGCTTTGCTGTTTGAAAATGGAATCAGTTTAGTAAGTGGGAACGTGGCATTCTGGCATTAACTCAATTCGTTGTCTATTTCTCGGTTCTTAATTACTCAACCGAATGATGTCTAGAAAGAGATTTAAAGACAAATATGTTCAGAGTTTTAGACCCTTCTCAAATCTCACCTTTGGAATATCCACTTAATATCTCAATTTTTTGTGGTAACTAAACACAATGGAGTATCGAAGCAGTTTTGGTAGTTCTGGGCCCATGATTCGAGTTTGGTTTAATCATTCTTATTGACATTTTTGCCGTATTGCTCTCAGCAAGTTTATGTGAAAAATAAGATACCTATGCTTTTCTCCAAGTCTAATACTGAAAAGTTTCTGATTCCTCTATGTGCCCTATGCAACTTTGTGGATACTACAAAAATATAATCAAATGATGGGTCTATAAGCTCCATTCAATTCAAGACTAAAATTTAGATGTTGAAATAACATGGTCCATAAAACACAAATTGTGTTCTTTTAGACCTAAAAGTATAAATAATTGATTTGATTTTTGTTAAAATTGGAAGATTTTTGGATATTGGATGTTTAGAGAGTGTAATAACTTTTGGCTATGGAAAATTAATTCGAATGGCATGGATTTAGATTGTTTTAATTAAGTTTGTACAGAAATCGTGCCCTTGCACGTTCTTGTTGCTCATATATTTATGTAACAGGACTCTTCTGTTAGTTATACCGGTGTAGAAGATGCTACAAGTGATAATGACATAAGTGACGACTCAGAAGTTAATACTGAGGATTCCACTCAGTCAGTCATTATAGCAGCACTTCAGTCCTATAAGCAGGCGTTAGCTGATAACGATGGAGCTCAAATGGTTGAAATAGAGTCTTTTCTGAAGTCAATTGAAGATGAAAAGCTCGCAGTTGAAAGGAAGTTGAGTTCCTTAATTGAAGAACTTTCTGTAGAGAAGGATAGAGTTTTGAGAATCAGTGCTGACTTTGATAATTTTCGGAAGAGAACAGAGCGAGAACGTCTTTCATTAGTAAAAAATGCTCAAGGAGAAGTAGTAGAGACTCTATTAGGTGTCCTGGATAATTTTGAGAGAGCTAGGGCACAGATCAAGGTGGAGACAGAGGGGGAAGAGAAGATCAATCAGAGTTACCAGAGCATCTATAAGCAGTTCACCGAGATTTTGGGCTCCTTGGGTGTAGTTCCTGTTGAGACAATTGGGAAACCGTTTGACCCACTGGTGAGTTTTTTCTTCTTGTCAAGTAATCATTCTTGTGTCTCGTTTCCCCCTTATTCATCAAAGTTTGAGTCACTACTAATCAGTCAGTAGAGTCTAATAAGTGAACTTGTATTCCATGTGTGAACCTGTAGTCTCTTTTATTTAACATGACCATCCATTTTCCTTGACACTTCCCATATTGGTAACTTCCTAAAACTTAATAATTGGTGAACCTGTTTTCGTTAACAAACTGTTCTCTTCTTAAAGTATCTGCCCATGGTGGATTTATCCATCAACTTGATGAGTAAAATGGTGGTATATATTTAATACCATTTGTTCTAGTAAGACAATAGAAACTTATGGAACTGTTGGACCTTTCCTTCGAAAAGTTATGATCATGACTGGATGAACTTTTTCTGATATCTGATCTTGTAATCTCAAACATGAATATGGTTTAAAACCTAACCAACCCATGAAGGTTCCTTTATTTGTGTCTATTTTGACCATAGAAAAAACAAGAGTTGTGATCAGCTAATGCGAAGACCAAATGATTTCGGTAGCCATCACTTTTGTTTTGCATTTAAAATGATGAGAGTGTGAATCAAATTTTCCTTTATAATATTTTTCCCAAAAGTATGTGATGTAAATTATTGGTGGAGTTCCCTGGATCCATCCATAAGAAGTAATGCGTCTCATATGGGTTATTTTTCATGGAAAAGGATCAAAGAAGAGAAAGTTACTTTGGAAGTGTGCTATCTTGGATCCGTTATCGGTTTTATGGTTGGAGCTCAATAAAAGAATTATTGAAGATAAATTTGAAGATCTAGACCAGGTTCAGAGTGAATCTGATAGTGTCATTGTTGGAGCAAAAAGGTTGAAGACTTTACTAGTTCTGCCAATCAGTCTATTTCATTCAATAGGTGATTTTTCCTCGACAATTTTATCTTTCAAGGAGGCCTTCTCCTGAAATATTGTAACCTATTCAAATTGTTATTATCAATGACAAAGCTATTAGTTCTATCTGATATTGTGACTAATCTCTTGTATCTGTTTAAGTTTTCGACTATCTTCAATCCCATCAAATTTTAAGGTAATGTGTTTTTGTGTTTTCATTTTTGAATTCTATTTGATATGCATTCAAAACTAGCATGGCATGATCAAACATGGAACTAATCAGGGTCCTGTTTTTTTATCTCTCTTTATGGGGACCAAGTTTGGTAAGTTGAAACTTGTTTAATCAATTTCTTCCTACAGCTTCATGAAGCAATCATGAGGGAGGACTCCACAGAATTTGAGGAAGGTATCATACTCGACGAGTTCCGTAAAGGATTCTTGCTTGGTGACAGACTCTTACGTCCATCAATGGTGAAAGTTTCAGCCGGTCCCGGGCCTGAAAAGTCAGATGAAACCGCACCAGCAGAAAAGCTTGATTCAAGTGAAGAATTTGCAAACTCGGAATCAGAGTCTTCTTAAAACTCCCAATCCTCTTGACCACAATCCAATTTTGATTATAGTCTGAATCTTTTTAATGCCTGATAAGAGACTGGAGATGGAGTTTATTTGTGTTATTATTGGTGATCAAGGTTTTGCAGGCAGAGAATTTTGATATTTGATTTCAGGAAATAGCTTTGGATGATGAAAAAATGTTGTTGCCGTGAAGATAATCACTTAGTGAAATGATGTATTTGATTTAGACAAACAATTCTCTTTTTAAAAACTTTTTCGCTATAACTTGTTGAGAGAACTTACCAAAGTTTCTATTGTAAACTTTGTAGAATTTGTTGAATGTGCCTTGATTTCAGGACAAATAAGC ATATTTTTTGGAAAAATAATGATATTATAATTTATTCTCACCCAAAAAAACCCAACCTTTGTGGCGTCTTCCACTTCCTTCTTCTCTCTTCTCTACCCTTATCTCTCTCTCTCTTTTTGTAAATTCTCTCATGGCGACCCTTCTCAGAACTCCATTTTTTCAGGCAACTCCTCCCGCCAGCGTTTCCGCCTTTTCCTTATCCAAATCCACCCTAAAACCCTCTTCTTTATCCTTTACAACATCTCACTCCTTCATTTGTTGCTTCAACTCCTCCAAGTTTTCAACTCGTCCTCCTTCTCTCCGGTTCCCCAAGCGGCCTTTTGCTTCCTCCGGTGAAACGGAAATTAGCGAGCTTGAAGAGGAAGTTCGCGATTCTGAGGCGGAGGACTCTTCTGTTAGTTATACCGGTGTAGAAGATGCTACAAGTGATAATGACATAAGTGACGACTCAGAAGTTAATACTGAGGATTCCACTCAGTCAGTCATTATAGCAGCACTTCAGTCCTATAAGCAGGCGTTAGCTGATAACGATGGAGCTCAAATGGTTGAAATAGAGTCTTTTCTGAAGTCAATTGAAGATGAAAAGCTCGCAGTTGAAAGGAAGTTGAGTTCCTTAATTGAAGAACTTTCTGTAGAGAAGGATAGAGTTTTGAGAATCAGTGCTGACTTTGATAATTTTCGGAAGAGAACAGAGCGAGAACGTCTTTCATTAGTAAAAAATGCTCAAGGAGAAGTAGTAGAGACTCTATTAGGTGTCCTGGATAATTTTGAGAGAGCTAGGGCACAGATCAAGGTGGAGACAGAGGGGGAAGAGAAGATCAATCAGAGTTACCAGAGCATCTATAAGCAGTTCACCGAGATTTTGGGCTCCTTGGGTGTAGTTCCTGTTGAGACAATTGGGAAACCGTTTGACCCACTGCTTCATGAAGCAATCATGAGGGAGGACTCCACAGAATTTGAGGAAGGTATCATACTCGACGAGTTCCGTAAAGGATTCTTGCTTGGTGACAGACTCTTACGTCCATCAATGGTGAAAGTTTCAGCCGGTCCCGGGCCTGAAAAGTCAGATGAAACCGCACCAGCAGAAAAGCTTGATTCAAGTGAAGAATTTGCAAACTCGGAATCAGAGTCTTCTTAAAACTCCCAATCCTCTTGACCACAATCCAATTTTGATTATAGTCTGAATCTTTTTAATGCCTGATAAGAGACTGGAGATGGAGTTTATTTGTGTTATTATTGGTGATCAAGGTTTTGCAGGCAGAGAATTTTGATATTTGATTTCAGGAAATAGCTTTGGATGATGAAAAAATGTTGTTGCCGTGAAGATAATCACTTAGTGAAATGATGTATTTGATTTAGACAAACAATTCTCTTTTTAAAAACTTTTTCGCTATAACTTGTTGAGAGAACTTACCAAAGTTTCTATTGTAAACTTTGTAGAATTTGTTGAATGTGCCTTGATTTCAGGACAAATAAGC ATGGCGACCCTTCTCAGAACTCCATTTTTTCAGGCAACTCCTCCCGCCAGCGTTTCCGCCTTTTCCTTATCCAAATCCACCCTAAAACCCTCTTCTTTATCCTTTACAACATCTCACTCCTTCATTTGTTGCTTCAACTCCTCCAAGTTTTCAACTCGTCCTCCTTCTCTCCGGTTCCCCAAGCGGCCTTTTGCTTCCTCCGGTGAAACGGAAATTAGCGAGCTTGAAGAGGAAGTTCGCGATTCTGAGGCGGAGGACTCTTCTGTTAGTTATACCGGTGTAGAAGATGCTACAAGTGATAATGACATAAGTGACGACTCAGAAGTTAATACTGAGGATTCCACTCAGTCAGTCATTATAGCAGCACTTCAGTCCTATAAGCAGGCGTTAGCTGATAACGATGGAGCTCAAATGGTTGAAATAGAGTCTTTTCTGAAGTCAATTGAAGATGAAAAGCTCGCAGTTGAAAGGAAGTTGAGTTCCTTAATTGAAGAACTTTCTGTAGAGAAGGATAGAGTTTTGAGAATCAGTGCTGACTTTGATAATTTTCGGAAGAGAACAGAGCGAGAACGTCTTTCATTAGTAAAAAATGCTCAAGGAGAAGTAGTAGAGACTCTATTAGGTGTCCTGGATAATTTTGAGAGAGCTAGGGCACAGATCAAGGTGGAGACAGAGGGGGAAGAGAAGATCAATCAGAGTTACCAGAGCATCTATAAGCAGTTCACCGAGATTTTGGGCTCCTTGGGTGTAGTTCCTGTTGAGACAATTGGGAAACCGTTTGACCCACTGCTTCATGAAGCAATCATGAGGGAGGACTCCACAGAATTTGAGGAAGGTATCATACTCGACGAGTTCCGTAAAGGATTCTTGCTTGGTGACAGACTCTTACGTCCATCAATGGTGAAAGTTTCAGCCGGTCCCGGGCCTGAAAAGTCAGATGAAACCGCACCAGCAGAAAAGCTTGATTCAAGTGAAGAATTTGCAAACTCGGAATCAGAGTCTTCTTAA MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFPKRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVIIAALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSMVKVSAGPGPEKSDETAPAEKLDSSEEFANSESESS* Homology
BLAST of CSPI04G18710.1 vs. ExPASy Swiss-Prot
Match: Q8DJB3 (Protein GrpE OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=grpE PE=3 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.5e-32 Identity = 82/231 (35.50%), Postives = 136/231 (58.87%), Query Frame = 0
BLAST of CSPI04G18710.1 vs. ExPASy Swiss-Prot
Match: Q8YUA7 (Protein GrpE OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=grpE PE=3 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 2.5e-32 Identity = 75/168 (44.64%), Postives = 112/168 (66.67%), Query Frame = 0
BLAST of CSPI04G18710.1 vs. ExPASy Swiss-Prot
Match: A9B9L4 (Protein GrpE OS=Prochlorococcus marinus (strain MIT 9211) OX=93059 GN=grpE PE=3 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 5.6e-32 Identity = 80/202 (39.60%), Postives = 118/202 (58.42%), Query Frame = 0
BLAST of CSPI04G18710.1 vs. ExPASy Swiss-Prot
Match: Q3ANN0 (Protein GrpE OS=Synechococcus sp. (strain CC9605) OX=110662 GN=grpE PE=3 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 7.3e-32 Identity = 82/221 (37.10%), Postives = 133/221 (60.18%), Query Frame = 0
BLAST of CSPI04G18710.1 vs. ExPASy Swiss-Prot
Match: A2BTV4 (Protein GrpE OS=Prochlorococcus marinus (strain MIT 9515) OX=167542 GN=grpE PE=3 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 2.1e-31 Identity = 84/238 (35.29%), Postives = 142/238 (59.66%), Query Frame = 0
BLAST of CSPI04G18710.1 vs. ExPASy TrEMBL
Match: A0A0A0L229 (GrpE protein homolog OS=Cucumis sativus OX=3659 GN=Csa_4G417510 PE=3 SV=1) HSP 1 Score: 612.8 bits (1579), Expect = 8.3e-172 Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0
BLAST of CSPI04G18710.1 vs. ExPASy TrEMBL
Match: A0A5D3CEQ0 (GrpE protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G001100 PE=3 SV=1) HSP 1 Score: 592.8 bits (1527), Expect = 8.9e-166 Identity = 324/335 (96.72%), Postives = 331/335 (98.81%), Query Frame = 0
BLAST of CSPI04G18710.1 vs. ExPASy TrEMBL
Match: A0A1S3C2C6 (GrpE protein homolog OS=Cucumis melo OX=3656 GN=LOC103495867 PE=3 SV=1) HSP 1 Score: 592.8 bits (1527), Expect = 8.9e-166 Identity = 324/335 (96.72%), Postives = 331/335 (98.81%), Query Frame = 0
BLAST of CSPI04G18710.1 vs. ExPASy TrEMBL
Match: A0A6J1DJU6 (GrpE protein homolog OS=Momordica charantia OX=3673 GN=LOC111021782 PE=3 SV=1) HSP 1 Score: 524.6 bits (1350), Expect = 3.0e-145 Identity = 290/336 (86.31%), Postives = 311/336 (92.56%), Query Frame = 0
BLAST of CSPI04G18710.1 vs. ExPASy TrEMBL
Match: A0A6J1GD85 (GrpE protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111453132 PE=3 SV=1) HSP 1 Score: 520.0 bits (1338), Expect = 7.3e-144 Identity = 290/336 (86.31%), Postives = 308/336 (91.67%), Query Frame = 0
BLAST of CSPI04G18710.1 vs. NCBI nr
Match: XP_004144308.1 (uncharacterized protein LOC101213532 [Cucumis sativus]) HSP 1 Score: 612.8 bits (1579), Expect = 1.7e-171 Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0
BLAST of CSPI04G18710.1 vs. NCBI nr
Match: XP_008455767.1 (PREDICTED: protein GrpE [Cucumis melo] >KAA0043664.1 protein GrpE [Cucumis melo var. makuwa] >TYK09698.1 protein GrpE [Cucumis melo var. makuwa]) HSP 1 Score: 592.8 bits (1527), Expect = 1.8e-165 Identity = 324/335 (96.72%), Postives = 331/335 (98.81%), Query Frame = 0
BLAST of CSPI04G18710.1 vs. NCBI nr
Match: XP_038883542.1 (protein GrpE isoform X1 [Benincasa hispida]) HSP 1 Score: 554.7 bits (1428), Expect = 5.6e-154 Identity = 308/336 (91.67%), Postives = 317/336 (94.35%), Query Frame = 0
BLAST of CSPI04G18710.1 vs. NCBI nr
Match: XP_022154525.1 (uncharacterized protein LOC111021782 isoform X1 [Momordica charantia]) HSP 1 Score: 524.6 bits (1350), Expect = 6.2e-145 Identity = 290/336 (86.31%), Postives = 311/336 (92.56%), Query Frame = 0
BLAST of CSPI04G18710.1 vs. NCBI nr
Match: XP_023543468.1 (uncharacterized protein LOC111803344 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 522.3 bits (1344), Expect = 3.1e-144 Identity = 291/336 (86.61%), Postives = 309/336 (91.96%), Query Frame = 0
BLAST of CSPI04G18710.1 vs. TAIR 10
Match: AT5G17710.2 (Co-chaperone GrpE family protein ) HSP 1 Score: 302.0 bits (772), Expect = 6.0e-82 Identity = 190/340 (55.88%), Postives = 237/340 (69.71%), Query Frame = 0
BLAST of CSPI04G18710.1 vs. TAIR 10
Match: AT5G17710.1 (Co-chaperone GrpE family protein ) HSP 1 Score: 301.6 bits (771), Expect = 7.9e-82 Identity = 191/340 (56.18%), Postives = 236/340 (69.41%), Query Frame = 0
BLAST of CSPI04G18710.1 vs. TAIR 10
Match: AT1G36390.1 (Co-chaperone GrpE family protein ) HSP 1 Score: 183.0 bits (463), Expect = 4.1e-46 Identity = 97/218 (44.50%), Postives = 152/218 (69.72%), Query Frame = 0
BLAST of CSPI04G18710.1 vs. TAIR 10
Match: AT1G36390.2 (Co-chaperone GrpE family protein ) HSP 1 Score: 183.0 bits (463), Expect = 4.1e-46 Identity = 97/218 (44.50%), Postives = 152/218 (69.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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