CSPI04G03990.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI04G03990.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Ribosomal protein L15
Location	Chr4: 2531919 .. 2533817 (-)
Sequence length	921
RNA-Seq Expression	CSPI04G03990.1
Synteny	CSPI04G03990.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCAAACCCTAGCCGGTGTGTCTTCAGCAGCCTGACGTTTCTTTCCAATGGGTATGTCTCTTCTTCTTCTTCTTCCTTTCTTCTTTTTCTCGTTTAAAGTTTCCAATGGGTATGTCTATTCTTCTTCTTCTTCTTCCTTTCTTCTTCCTTCCTTCTTTATCTCGTTTAAATTTTCAGCGTTTGAGGAGCTTTCCCCCCAAGTTTTGAATGTGTTCTTACTATCTTCATAATCTTTCTATTGTTTGGGGAGGAGCTTTGATTAGATTGTATAATGGTTTTGTTTGATGTAAAGTTTCTTTTATCACATTTTGATATTTCTAGCTTCTTTGCGGTATTTGGTTAAATGATATTTTTGCTCTATATTTTTTTTTACTATGTTCAAAATCTTTCAGTTTAGATTGTTTGTGCAGGAGCCTATATTAGATTGTTGTATGTTTATGTTTGATGAAAATTTAATAGTTTCTTCTTTTTTTGCTTGGTTCCCACCATTTGTAATTTGGAAAAATAGGGGCGTACAAGTACGTGTCAGAGCTATGGAGGAAGAAGCAGTCCGATGTGATGAGGTTTCTCCAGAGGGTCAGATGCTGGGAATATCGCCAACATCCATCGATTGTCCGCGTCAACCATCCCACTCGCCCGGATAAAGCTCGGCGTCTTGGTTACAAAGCCAAACAGGTAAGAAAATATATTAACATTTCCTTATAAAGTTTGTTGTATCTAAGCCTTCATGAGTTTTTTTCCTAGGTGATTTGGTCAGCATATTTTCAGTATATGTCATTGAAATTTTCGGTATCCTTGTTATATTTTGTTCCTAATGTACACTCTTTAATTAGGAATTTTTGTTGTCTGCGTCTGCCACCATTTTGATAGCATAAGGAATATTTTCTGTTATTAGTATTTGGTTTGAGTATTACACATTGAGGTTTTACCCTATTAGGATTATTTTCCTAAGAGAAAAGATAATCATGATGTAACCAACCTTTTGACAAAAGAGCTGATATGCACAGTCCTCTCTTATAATTTCTTGTTGAGTGTTCATTTTTTTCTCAGTATGGTGTCGATATCATTTGCTGCTTCAGCTGCAATAGTGATTGGTGAGTGAACTTTTTTGTTGCAGGGTTATGTGGTTTACAGGGTCCGAGTGAGACGTGGTGGTAGGAAGAGGCCTGTTCCTAAGGGTATTGTGTATGGGAAGCCAACAAACCAGGGTGTTACCCAATTGAAATTCCAGCGCAGCAAGCGATCAGTTGCAGAAGAACGGGCAGGGCGAAAGTTGGGTGGTTTGAGAGTTGTAAATTCTTACTGGATCAACGAGGTAATTTTCTGTAAAATTGAGGATATAAAATCGTAAATCCTTGTGGATCGTTTTCTGACTGTTACCAAAATTGTTATAGGATTCTACCTACAAATACTATGAAGTGATTTTGGTTGATGTTGCCCATAATGCGGTTCGCAATGACCCGAGAATCAACTGGATCTGCAATCCAGTCCACAAACACAGGGAGCTCAGAGGACTCACATCAGCTGGCAAGAAGTACAGGGGTCTTCGAGGAAAAGGACATTTGCACCACAAAGCCAGGCCTTCTCGCCGAGCAACCTGGAAGAGGAACAACACTCTCTCACTGCGTCGATACCGTTGATTTTGGTATTGTTTTCCTCTGTTTTGGTATTTTTGTTATGAGCATTCTGTTGGTTGAGGAATGTAGTGGAAGTTGCTTCAATCTAAAAAGTTTTGAACTTCATAATTTACATTGAGATTTGTCAGGATGTTTCTAAACTAAACCAAGTATCAACTTTTGTGTTCATTGCAATTAATGTATTTTTTTTTATATCTGGTTACCATTTTTGTTCCCACAGGTTTGGATGGAAGTATCTGTTATTTGTTTGTTTATGCGATTA

mRNA sequence

CGCAAACCCTAGCCGGTGTGTCTTCAGCAGCCTGACGTTTCTTTCCAATGGGGGCGTACAAGTACGTGTCAGAGCTATGGAGGAAGAAGCAGTCCGATGTGATGAGGTTTCTCCAGAGGGTCAGATGCTGGGAATATCGCCAACATCCATCGATTGTCCGCGTCAACCATCCCACTCGCCCGGATAAAGCTCGGCGTCTTGGTTACAAAGCCAAACAGGGTTATGTGGTTTACAGGGTCCGAGTGAGACGTGGTGGTAGGAAGAGGCCTGTTCCTAAGGGTATTGTGTATGGGAAGCCAACAAACCAGGGTGTTACCCAATTGAAATTCCAGCGCAGCAAGCGATCAGTTGCAGAAGAACGGGCAGGGCGAAAGTTGGGTGGTTTGAGAGTTGTAAATTCTTACTGGATCAACGAGGATTCTACCTACAAATACTATGAAGTGATTTTGGTTGATGTTGCCCATAATGCGGTTCGCAATGACCCGAGAATCAACTGGATCTGCAATCCAGTCCACAAACACAGGGAGCTCAGAGGACTCACATCAGCTGGCAAGAAGTACAGGGGTCTTCGAGGAAAAGGACATTTGCACCACAAAGCCAGGCCTTCTCGCCGAGCAACCTGGAAGAGGAACAACACTCTCTCACTGCGTCGATACCGTTGATTTTGGTATTGTTTTCCTCTGTTTTGGTATTTTTGTTATGAGCATTCTGTTGGTTGAGGAATGTAGTGGAAGTTGCTTCAATCTAAAAAGTTTTGAACTTCATAATTTACATTGAGATTTGTCAGGATGTTTCTAAACTAAACCAAGTATCAACTTTTGTGTTCATTGCAATTAATGTATTTTTTTTTATATCTGGTTACCATTTTTGTTCCCACAGGTTTGGATGGAAGTATCTGTTATTTGTTTGTTTATGCGATTA

Coding sequence (CDS)

ATGGGGGCGTACAAGTACGTGTCAGAGCTATGGAGGAAGAAGCAGTCCGATGTGATGAGGTTTCTCCAGAGGGTCAGATGCTGGGAATATCGCCAACATCCATCGATTGTCCGCGTCAACCATCCCACTCGCCCGGATAAAGCTCGGCGTCTTGGTTACAAAGCCAAACAGGGTTATGTGGTTTACAGGGTCCGAGTGAGACGTGGTGGTAGGAAGAGGCCTGTTCCTAAGGGTATTGTGTATGGGAAGCCAACAAACCAGGGTGTTACCCAATTGAAATTCCAGCGCAGCAAGCGATCAGTTGCAGAAGAACGGGCAGGGCGAAAGTTGGGTGGTTTGAGAGTTGTAAATTCTTACTGGATCAACGAGGATTCTACCTACAAATACTATGAAGTGATTTTGGTTGATGTTGCCCATAATGCGGTTCGCAATGACCCGAGAATCAACTGGATCTGCAATCCAGTCCACAAACACAGGGAGCTCAGAGGACTCACATCAGCTGGCAAGAAGTACAGGGGTCTTCGAGGAAAAGGACATTTGCACCACAAAGCCAGGCCTTCTCGCCGAGCAACCTGGAAGAGGAACAACACTCTCTCACTGCGTCGATACCGTTGA

Protein sequence

MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYWINEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNNTLSLRRYR*

Homology

[Close]

BLAST of CSPI04G03990.1 vs. ExPASy Swiss-Prot
Match: O23515 (60S ribosomal protein L15-1 OS=Arabidopsis thaliana OX=3702 GN=RPL15A PE=2 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 1.4e-107
Identity = 189/204 (92.65%), Postives = 196/204 (96.08%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVR+  PTRPDKARRLGYKAKQG+V
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQGFV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           +NEDSTYKYYE+ILVD AHNAVRNDPRINWICNPVHKHRELRGLTS GKK RGLRGKGH 
Sbjct: 121 LNEDSTYKYYEIILVDPAHNAVRNDPRINWICNPVHKHRELRGLTSEGKKNRGLRGKGHN 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           +HK RPSRRATWK+NN+LSLRRYR
Sbjct: 181 NHKNRPSRRATWKKNNSLSLRRYR 204

[Close]

BLAST of CSPI04G03990.1 vs. ExPASy Swiss-Prot
Match: Q8VYF1 (60S ribosomal protein L15-2 OS=Arabidopsis thaliana OX=3702 GN=RPL15B PE=2 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 2.5e-107
Identity = 188/204 (92.16%), Postives = 196/204 (96.08%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVR+  PTRPDKARRLGYKAKQG+V
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQGFV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           +NEDSTYKYYE+ILVD AHNAVRNDPRINWICNPVHKHRELRGLTS GKK RGLRGKGH 
Sbjct: 121 LNEDSTYKYYEIILVDPAHNAVRNDPRINWICNPVHKHRELRGLTSEGKKNRGLRGKGHN 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           +HK RPSRRATWK+NN++SLRRYR
Sbjct: 181 NHKNRPSRRATWKKNNSISLRRYR 204

[Close]

BLAST of CSPI04G03990.1 vs. ExPASy Swiss-Prot
Match: O65082 (60S ribosomal protein L15-2 OS=Picea mariana OX=3335 GN=SB62 PE=2 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 7.2e-107
Identity = 183/204 (89.71%), Postives = 194/204 (95.10%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKY+ ELW+KKQSDVMRFLQRVRCWEYRQ P IVR+ HPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYIEELWKKKQSDVMRFLQRVRCWEYRQLPGIVRITHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKP NQG+TQLKFQRS RSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPKNQGITQLKFQRSLRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           IN+DSTYKYYEV+LVD AH  +RNDPRINWICN VHKHRELRGLTSAGKKYRGLRG+GHL
Sbjct: 121 INQDSTYKYYEVVLVDQAHTVIRNDPRINWICNAVHKHRELRGLTSAGKKYRGLRGRGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           +HKARPS+RATWKRNNTLSLRRYR
Sbjct: 181 YHKARPSKRATWKRNNTLSLRRYR 204

[Close]

BLAST of CSPI04G03990.1 vs. ExPASy Swiss-Prot
Match: O82528 (60S ribosomal protein L15 OS=Petunia hybrida OX=4102 GN=RPL15 PE=2 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 3.6e-106
Identity = 187/204 (91.67%), Postives = 194/204 (95.10%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAY YVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVRV  PTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYTYVSELWRKKQSDVMRFLQRVRCWEYRQLPSIVRVTRPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRV+RGGRKRPVPKGIVYGKPTNQGVTQLKFQR+KRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVKRGGRKRPVPKGIVYGKPTNQGVTQLKFQRTKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKY+EVILVD AH A+RNDPRINWICNPVHKHRELRGLTSAGKKYRGLRG+GHL
Sbjct: 121 INEDSTYKYFEVILVDQAHAAIRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGRGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           H+KA PSRRA WKRN TLSL RYR
Sbjct: 181 HNKAPPSRRANWKRNQTLSLPRYR 204

[Close]

BLAST of CSPI04G03990.1 vs. ExPASy Swiss-Prot
Match: O65050 (60S ribosomal protein L15-1 OS=Picea mariana OX=3335 GN=SB61 PE=2 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 5.2e-105
Identity = 181/204 (88.73%), Postives = 194/204 (95.10%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKY+ ELW+KKQSDVMRFLQRVRCWE+RQ P IVRV  P+RPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYIEELWKKKQSDVMRFLQRVRCWEFRQLPGIVRVTRPSRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKP NQG+TQLKFQRS RSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPKNQGITQLKFQRSLRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           IN+DSTYKYYE+ILVD AH+A+R DPRINWICN VHKHRELRGLTSAGKKYRGLRG+GHL
Sbjct: 121 INQDSTYKYYEIILVDQAHSAIRKDPRINWICNAVHKHRELRGLTSAGKKYRGLRGRGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           +HKARPS+RATWKRNNTLSLRRYR
Sbjct: 181 YHKARPSKRATWKRNNTLSLRRYR 204

[Close]

BLAST of CSPI04G03990.1 vs. ExPASy TrEMBL
Match: A0A0A0KU38 (Ribosomal protein L15 OS=Cucumis sativus OX=3659 GN=Csa_3G112770 PE=3 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.7e-114
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]

BLAST of CSPI04G03990.1 vs. ExPASy TrEMBL
Match: A0A6J1H209 (Ribosomal protein L15 OS=Cucurbita moschata OX=3662 GN=LOC111459317 PE=3 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 3.7e-114
Identity = 203/204 (99.51%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]

BLAST of CSPI04G03990.1 vs. ExPASy TrEMBL
Match: A0A6J1IBQ7 (Ribosomal protein L15 OS=Cucurbita maxima OX=3661 GN=LOC111471514 PE=3 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 3.7e-114
Identity = 203/204 (99.51%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]

BLAST of CSPI04G03990.1 vs. ExPASy TrEMBL
Match: A0A6J1CIS0 (Ribosomal protein L15 OS=Momordica charantia OX=3673 GN=LOC111011546 PE=3 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 1.8e-113
Identity = 202/204 (99.02%), Postives = 203/204 (99.51%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRV HPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]

BLAST of CSPI04G03990.1 vs. ExPASy TrEMBL
Match: A0A6J1K617 (Ribosomal protein L15 OS=Cucurbita maxima OX=3661 GN=LOC111491487 PE=3 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 1.8e-113
Identity = 202/204 (99.02%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ+PSIVRVNHPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQYPSIVRVNHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]

BLAST of CSPI04G03990.1 vs. NCBI nr
Match: XP_004146916.1 (60S ribosomal protein L15-1 [Cucumis sativus] >XP_011650580.1 60S ribosomal protein L15-1 [Cucumis sativus] >XP_011650582.1 60S ribosomal protein L15-1 [Cucumis sativus] >KGN53150.1 hypothetical protein Csa_014815 [Cucumis sativus] >KGN56283.1 hypothetical protein Csa_009879 [Cucumis sativus] >KGN56284.1 hypothetical protein Csa_011281 [Cucumis sativus])

HSP 1 Score: 421.8 bits (1083), Expect = 3.4e-114
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]

BLAST of CSPI04G03990.1 vs. NCBI nr
Match: XP_022922395.1 (60S ribosomal protein L15-2-like [Cucurbita moschata] >XP_022957930.1 60S ribosomal protein L15-2-like [Cucurbita moschata] >XP_022972988.1 60S ribosomal protein L15-2-like [Cucurbita maxima] >XP_023521483.1 60S ribosomal protein L15-2 [Cucurbita pepo subsp. pepo] >XP_023533846.1 60S ribosomal protein L15-2 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023533847.1 60S ribosomal protein L15-2 isoform X2 [Cucurbita pepo subsp. pepo] >KAG6579403.1 60S ribosomal protein L15, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016881.1 60S ribosomal protein L15, partial [Cucurbita argyrosperma subsp. argyrosperma] >KAG6606168.1 60S ribosomal protein L15, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 420.6 bits (1080), Expect = 7.6e-114
Identity = 203/204 (99.51%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]

BLAST of CSPI04G03990.1 vs. NCBI nr
Match: XP_022141052.1 (60S ribosomal protein L15-2 [Momordica charantia] >XP_022154831.1 60S ribosomal protein L15-2 [Momordica charantia])

HSP 1 Score: 418.3 bits (1074), Expect = 3.8e-113
Identity = 202/204 (99.02%), Postives = 203/204 (99.51%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRV HPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]

BLAST of CSPI04G03990.1 vs. NCBI nr
Match: XP_022996180.1 (60S ribosomal protein L15-2 [Cucurbita maxima])

HSP 1 Score: 418.3 bits (1074), Expect = 3.8e-113
Identity = 202/204 (99.02%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ+PSIVRVNHPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQYPSIVRVNHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]

BLAST of CSPI04G03990.1 vs. NCBI nr
Match: XP_008437057.1 (PREDICTED: 60S ribosomal protein L15-2 [Cucumis melo] >XP_008453903.1 PREDICTED: 60S ribosomal protein L15-2 [Cucumis melo] >KAA0039728.1 60S ribosomal protein L15-2 [Cucumis melo var. makuwa])

HSP 1 Score: 417.9 bits (1073), Expect = 5.0e-113
Identity = 201/204 (98.53%), Postives = 203/204 (99.51%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYYEVILVDVAHNA+RNDPRI WICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYYEVILVDVAHNAIRNDPRIKWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]

BLAST of CSPI04G03990.1 vs. TAIR 10
Match: AT4G16720.1 (Ribosomal protein L23/L15e family protein )

HSP 1 Score: 390.2 bits (1001), Expect = 1.0e-108
Identity = 189/204 (92.65%), Postives = 196/204 (96.08%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVR+  PTRPDKARRLGYKAKQG+V
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQGFV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           +NEDSTYKYYE+ILVD AHNAVRNDPRINWICNPVHKHRELRGLTS GKK RGLRGKGH 
Sbjct: 121 LNEDSTYKYYEIILVDPAHNAVRNDPRINWICNPVHKHRELRGLTSEGKKNRGLRGKGHN 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           +HK RPSRRATWK+NN+LSLRRYR
Sbjct: 181 NHKNRPSRRATWKKNNSLSLRRYR 204

[Close]

BLAST of CSPI04G03990.1 vs. TAIR 10
Match: AT4G17390.1 (Ribosomal protein L23/L15e family protein )

HSP 1 Score: 389.4 bits (999), Expect = 1.8e-108
Identity = 188/204 (92.16%), Postives = 196/204 (96.08%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVR+  PTRPDKARRLGYKAKQG+V
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQGFV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           +NEDSTYKYYE+ILVD AHNAVRNDPRINWICNPVHKHRELRGLTS GKK RGLRGKGH 
Sbjct: 121 LNEDSTYKYYEIILVDPAHNAVRNDPRINWICNPVHKHRELRGLTSEGKKNRGLRGKGHN 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           +HK RPSRRATWK+NN++SLRRYR
Sbjct: 181 NHKNRPSRRATWKKNNSISLRRYR 204

The following BLAST results are available for this feature:

BLAST of CSPI04G03990.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23515	1.4e-107	92.65	60S ribosomal protein L15-1 OS=Arabidopsis thaliana OX=3702 GN=RPL15A PE=2 SV=1	[more]
Q8VYF1	2.5e-107	92.16	60S ribosomal protein L15-2 OS=Arabidopsis thaliana OX=3702 GN=RPL15B PE=2 SV=1	[more]
O65082	7.2e-107	89.71	60S ribosomal protein L15-2 OS=Picea mariana OX=3335 GN=SB62 PE=2 SV=1	[more]
O82528	3.6e-106	91.67	60S ribosomal protein L15 OS=Petunia hybrida OX=4102 GN=RPL15 PE=2 SV=1	[more]
O65050	5.2e-105	88.73	60S ribosomal protein L15-1 OS=Picea mariana OX=3335 GN=SB61 PE=2 SV=1	[more]

BLAST of CSPI04G03990.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KU38	1.7e-114	100.00	Ribosomal protein L15 OS=Cucumis sativus OX=3659 GN=Csa_3G112770 PE=3 SV=1	[more]
A0A6J1H209	3.7e-114	99.51	Ribosomal protein L15 OS=Cucurbita moschata OX=3662 GN=LOC111459317 PE=3 SV=1	[more]
A0A6J1IBQ7	3.7e-114	99.51	Ribosomal protein L15 OS=Cucurbita maxima OX=3661 GN=LOC111471514 PE=3 SV=1	[more]
A0A6J1CIS0	1.8e-113	99.02	Ribosomal protein L15 OS=Momordica charantia OX=3673 GN=LOC111011546 PE=3 SV=1	[more]
A0A6J1K617	1.8e-113	99.02	Ribosomal protein L15 OS=Cucurbita maxima OX=3661 GN=LOC111491487 PE=3 SV=1	[more]

BLAST of CSPI04G03990.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146916.1	3.4e-114	100.00	60S ribosomal protein L15-1 [Cucumis sativus] >XP_011650580.1 60S ribosomal prot...	[more]
XP_022922395.1	7.6e-114	99.51	60S ribosomal protein L15-2-like [Cucurbita moschata] >XP_022957930.1 60S riboso...	[more]
XP_022141052.1	3.8e-113	99.02	60S ribosomal protein L15-2 [Momordica charantia] >XP_022154831.1 60S ribosomal ...	[more]
XP_022996180.1	3.8e-113	99.02	60S ribosomal protein L15-2 [Cucurbita maxima]	[more]
XP_008437057.1	5.0e-113	98.53	PREDICTED: 60S ribosomal protein L15-2 [Cucumis melo] >XP_008453903.1 PREDICTED:...	[more]

BLAST of CSPI04G03990.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16720.1	1.0e-108	92.65	Ribosomal protein L23/L15e family protein	[more]
AT4G17390.1	1.8e-108	92.16	Ribosomal protein L23/L15e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000439	Ribosomal protein L15e	SMART	SM01384	Ribosomal_L15e_2	coord: 2..193 e-value: 7.0E-142 score: 487.3
IPR000439	Ribosomal protein L15e	PFAM	PF00827	Ribosomal_L15e	coord: 2..190 e-value: 1.8E-90 score: 301.8
IPR000439	Ribosomal protein L15e	PANTHER	PTHR11847	RIBOSOMAL PROTEIN L15	coord: 1..204
IPR024794	Ribosomal protein L15e core domain superfamily	GENE3D	3.40.1120.10	Ribosomal protein l15e	coord: 1..204 e-value: 1.5E-116 score: 389.2
None	No IPR available	PANTHER	PTHR11847:SF25	RIBOSOMAL PROTEIN L15	coord: 1..204
IPR020925	Ribosomal protein L15e, conserved site	PROSITE	PS01194	RIBOSOMAL_L15E	coord: 46..69
IPR012678	Ribosomal protein L23/L15e core domain superfamily	SUPERFAMILY	54189	Ribosomal proteins S24e, L23 and L15e	coord: 1..195

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI04G03990	CSPI04G03990	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI04G03990.1.utr3p1	CSPI04G03990.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI04G03990.1.cds4	CSPI04G03990.1.cds4	CDS
CSPI04G03990.1.cds3	CSPI04G03990.1.cds3	CDS
CSPI04G03990.1.cds2	CSPI04G03990.1.cds2	CDS
CSPI04G03990.1.cds1	CSPI04G03990.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI04G03990.1.utr5p1	CSPI04G03990.1.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI04G03990.1	CSPI04G03990.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006383	transcription by RNA polymerase III
cellular_component	GO:0005840	ribosome
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005666	RNA polymerase III complex
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
molecular_function	GO:0003729	mRNA binding