CSPI03G45600.1 (mRNA) Cucumber (PI 183967) v1

Overview
NameCSPI03G45600.1
TypemRNA
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr3: 39014758 .. 39015126 (-)
Sequence length195
RNA-Seq ExpressionCSPI03G45600.1
SyntenyCSPI03G45600.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCTCAGGAAGTTGCCAATAAACGAAGCAACATACGTTCAAGCTACAAACGAATCAGCTCGAAAATCCACGTTACATACAATTCACAAAAAAAAAAAAAAAAATCACCAATTCCAGACAGCCCCTCGTACGTCCCAAGGATAAATTGGTGAGGCGAAGGGAGAAAATTCGGAAGGTTGGGGAAATGAAATGAACTTCAGTTGCAGCTGATCGTGTGAGTCTGTATATTCGATTATTACAAACAGAGGCTGCCTGGTCAGATCGCCAGCTCAAATTCGGAAATGGAATCCAATGATTATGGATGCAGGGGGAGGGATCTCAAGTGGAGCTTCTTCAATGGCGACGGAAGATGAACGGAAGCGATAG

mRNA sequence

ATGTTTCTCAGGAAGTTGCCAATAAACGAAGCAACATACGTTCAAGCTACAAACGAATCAGCTCGAAAATCCACAGGCTGCCTGGTCAGATCGCCAGCTCAAATTCGGAAATGGAATCCAATGATTATGGATGCAGGGGGAGGGATCTCAAGTGGAGCTTCTTCAATGGCGACGGAAGATGAACGGAAGCGATAG

Coding sequence (CDS)

ATGTTTCTCAGGAAGTTGCCAATAAACGAAGCAACATACGTTCAAGCTACAAACGAATCAGCTCGAAAATCCACAGGCTGCCTGGTCAGATCGCCAGCTCAAATTCGGAAATGGAATCCAATGATTATGGATGCAGGGGGAGGGATCTCAAGTGGAGCTTCTTCAATGGCGACGGAAGATGAACGGAAGCGATAG

Protein sequence

MFLRKLPINEATYVQATNESARKSTGCLVRSPAQIRKWNPMIMDAGGGISSGASSMATEDERKR*
Homology
[Close]
BLAST of CSPI03G45600.1 vs. ExPASy TrEMBL
Match: A0A0A0LEQ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G892710 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.2e-26
Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 0 

Query: 1  MFLRKLPINEATYVQATNESARKSTGCLVRSPAQIRKWNPMIMDAGGGISSGASSMATED 60
          MF RKLPINEATYVQATNESARKSTGCLVRSPAQIRKWNPMIMDAGGGISSGASSMATED
Sbjct: 1  MFHRKLPINEATYVQATNESARKSTGCLVRSPAQIRKWNPMIMDAGGGISSGASSMATED 60

Query: 61 ERKR 65
          ERKR
Sbjct: 61 ERKR 64

[Close]
BLAST of CSPI03G45600.1 vs. NCBI nr
Match: KGN60268.1 (hypothetical protein Csa_001550 [Cucumis sativus])

HSP 1 Score: 128.3 bits (321), Expect = 2.5e-26
Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 0 

Query: 1  MFLRKLPINEATYVQATNESARKSTGCLVRSPAQIRKWNPMIMDAGGGISSGASSMATED 60
          MF RKLPINEATYVQATNESARKSTGCLVRSPAQIRKWNPMIMDAGGGISSGASSMATED
Sbjct: 1  MFHRKLPINEATYVQATNESARKSTGCLVRSPAQIRKWNPMIMDAGGGISSGASSMATED 60

Query: 61 ERKR 65
          ERKR
Sbjct: 61 ERKR 64

The following BLAST results are available for this feature:
BLAST of CSPI03G45600.1 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI03G45600.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LEQ51.2e-2698.44Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G892710 PE=4 SV=1[more]
BLAST of CSPI03G45600.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60268.12.5e-2698.44hypothetical protein Csa_001550 [Cucumis sativus][more]
BLAST of CSPI03G45600.1 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CSPI03G45600CSPI03G45600gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI03G45600.1.cds2CSPI03G45600.1.cds2CDS
CSPI03G45600.1.cds1CSPI03G45600.1.cds1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CSPI03G45600.1CSPI03G45600.1-proteinpolypeptide