CSPI03G33800.1 (mRNA) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAATATCTATTTTTGTGTTCTTCTCTGTCACTCTATCTCACAGGAGGGATGTTGGTGGACAAGAGTTTGGAGGCATGTATTGTGCCATATTAATTGTCAACTAAGAATCTTAGCTTATCGATGCGACCCATTACCTGTTACAAAGTCTAATAACATACATCTTTCTTTATATTGCACAGCTCATTTGTTGTATCCGCTGCAATCCTTCAAGTTTTTGGGCAAGATATTGCAGAGCTGCCATTGGTTGCGACAAGTAATGGTACCCATGGCAAGGTCTGAGCAGTCAATTTCATTTCTTTTTTGTTTTTTGCTTTTGCCTGTGACAATTACCTTATACTGCGTTCTTTGATTTTTCCCTACACCATGGCTTATTACGAGTTTGTAAAGCAATTTGGAATGCTTTTGAATTCTTCTTCGACTTTCTAATCAAGAGTTTGCAATCTGTTGGCCATTCTGATTTGACTCTTTTCTACATGTAACGATGATAGGGCTACTTCCAAACATTGTTTTCGTGCATTGAGAGGCTGCTAGCTTTCTTGAAAGTCAAATGCCTTGTTCTACCAGCTGCTGAAGAAGCGGAGTCCATTTGGACTGAAAAATTTGGTTTTGAGAGAATAAAACCAGACCAGGTACATACTTCAAGGATCATAAGAATAGCACATATTCATTATCTGAAACGGTTTGAATTCCAGCCACGGCTAAATGAAATTCTGTGTCGACTCTCTGCAGCTCAGCAGCTATAGAAGAAGTTGTTGCCAGATGGTGACATTCAAAGGGACATCCATGCTTCAGAAAACGGTTCCGTCGTGTCGGATTGTAGGTGCTCCCTTGTGACCAACCATGGAAGGGTG ATGGTAATATCTATTTTTGTGTTCTTCTCTGTCACTCTATCTCACAGGAGGGATGTTGGTGGACAAGAGTTTGGAGGCATCTCATTTGTTGTATCCGCTGCAATCCTTCAAGTTTTTGGGCAAGATATTGCAGAGCTGCCATTGGTTGCGACAAGTAATGGTACCCATGGCAAGGGCTACTTCCAAACATTGTTTTCGTGCATTGAGAGGCTGCTAGCTTTCTTGAAAGTCAAATGCCTTGTTCTACCAGCTGCTGAAGAAGCGGAGTCCATTTGGACTGAAAAATTTGGTTTTGAGAGAATAAAACCAGACCAGCTCAGCAGCTATAGAAGAAGTTGTTGCCAGATGGTGACATTCAAAGGGACATCCATGCTTCAGAAAACGGTTCCGTCGTGTCGGATTGTAGGTGCTCCCTTGTGACCAACCATGGAAGGGTG ATGGTAATATCTATTTTTGTGTTCTTCTCTGTCACTCTATCTCACAGGAGGGATGTTGGTGGACAAGAGTTTGGAGGCATCTCATTTGTTGTATCCGCTGCAATCCTTCAAGTTTTTGGGCAAGATATTGCAGAGCTGCCATTGGTTGCGACAAGTAATGGTACCCATGGCAAGGGCTACTTCCAAACATTGTTTTCGTGCATTGAGAGGCTGCTAGCTTTCTTGAAAGTCAAATGCCTTGTTCTACCAGCTGCTGAAGAAGCGGAGTCCATTTGGACTGAAAAATTTGGTTTTGAGAGAATAAAACCAGACCAGCTCAGCAGCTATAGAAGAAGTTGTTGCCAGATGGTGACATTCAAAGGGACATCCATGCTTCAGAAAACGGTTCCGTCGTGTCGGATTGTAGGTGCTCCCTTGTGA MVISIFVFFSVTLSHRRDVGGQEFGGISFVVSAAILQVFGQDIAELPLVATSNGTHGKGYFQTLFSCIERLLAFLKVKCLVLPAAEEAESIWTEKFGFERIKPDQLSSYRRSCCQMVTFKGTSMLQKTVPSCRIVGAPL* Homology
BLAST of CSPI03G33800.1 vs. ExPASy Swiss-Prot
Match: F4IXE7 (Increased DNA methylation 1 OS=Arabidopsis thaliana OX=3702 GN=IDM1 PE=1 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.5e-10 Identity = 36/100 (36.00%), Postives = 60/100 (60.00%), Query Frame = 0
BLAST of CSPI03G33800.1 vs. ExPASy TrEMBL
Match: A0A0A0LGF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G745540 PE=4 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 1.2e-68 Identity = 136/147 (92.52%), Postives = 138/147 (93.88%), Query Frame = 0
BLAST of CSPI03G33800.1 vs. ExPASy TrEMBL
Match: A0A5A7TRX0 (Increased DNA methylation 1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003070 PE=4 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 4.0e-59 Identity = 118/131 (90.08%), Postives = 122/131 (93.13%), Query Frame = 0
BLAST of CSPI03G33800.1 vs. ExPASy TrEMBL
Match: A0A1S4DUR3 (uncharacterized protein LOC103486532 OS=Cucumis melo OX=3656 GN=LOC103486532 PE=4 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 4.0e-59 Identity = 118/131 (90.08%), Postives = 122/131 (93.13%), Query Frame = 0
BLAST of CSPI03G33800.1 vs. ExPASy TrEMBL
Match: A0A6J1CSX5 (uncharacterized protein LOC111014293 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014293 PE=4 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 9.8e-58 Identity = 115/131 (87.79%), Postives = 121/131 (92.37%), Query Frame = 0
BLAST of CSPI03G33800.1 vs. ExPASy TrEMBL
Match: A0A6J1CTW0 (uncharacterized protein LOC111014293 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014293 PE=4 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 6.3e-57 Identity = 115/138 (83.33%), Postives = 121/138 (87.68%), Query Frame = 0
BLAST of CSPI03G33800.1 vs. NCBI nr
Match: KAE8651058.1 (hypothetical protein Csa_002465 [Cucumis sativus]) HSP 1 Score: 240.4 bits (612), Expect = 9.7e-60 Identity = 117/119 (98.32%), Postives = 118/119 (99.16%), Query Frame = 0
BLAST of CSPI03G33800.1 vs. NCBI nr
Match: XP_031737472.1 (uncharacterized protein LOC105434963 isoform X2 [Cucumis sativus]) HSP 1 Score: 240.0 bits (611), Expect = 1.3e-59 Identity = 120/131 (91.60%), Postives = 122/131 (93.13%), Query Frame = 0
BLAST of CSPI03G33800.1 vs. NCBI nr
Match: XP_031738687.1 (uncharacterized protein LOC101203549 isoform X2 [Cucumis sativus]) HSP 1 Score: 240.0 bits (611), Expect = 1.3e-59 Identity = 120/131 (91.60%), Postives = 122/131 (93.13%), Query Frame = 0
BLAST of CSPI03G33800.1 vs. NCBI nr
Match: KAA0043959.1 (increased DNA methylation 1-like isoform X2 [Cucumis melo var. makuwa] >TYK25181.1 increased DNA methylation 1-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 237.3 bits (604), Expect = 8.2e-59 Identity = 118/131 (90.08%), Postives = 122/131 (93.13%), Query Frame = 0
BLAST of CSPI03G33800.1 vs. NCBI nr
Match: XP_031738686.1 (uncharacterized protein LOC101203549 isoform X1 [Cucumis sativus]) HSP 1 Score: 237.3 bits (604), Expect = 8.2e-59 Identity = 118/131 (90.08%), Postives = 122/131 (93.13%), Query Frame = 0
BLAST of CSPI03G33800.1 vs. TAIR 10
Match: AT2G37520.1 (Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain ) HSP 1 Score: 138.7 bits (348), Expect = 3.7e-33 Identity = 69/122 (56.56%), Postives = 91/122 (74.59%), Query Frame = 0
BLAST of CSPI03G33800.1 vs. TAIR 10
Match: AT3G53680.1 (Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain ) HSP 1 Score: 137.1 bits (344), Expect = 1.1e-32 Identity = 70/123 (56.91%), Postives = 90/123 (73.17%), Query Frame = 0
BLAST of CSPI03G33800.1 vs. TAIR 10
Match: AT2G36720.1 (Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain ) HSP 1 Score: 136.7 bits (343), Expect = 1.4e-32 Identity = 69/123 (56.10%), Postives = 90/123 (73.17%), Query Frame = 0
BLAST of CSPI03G33800.1 vs. TAIR 10
Match: AT2G27980.1 (Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain ) HSP 1 Score: 125.9 bits (315), Expect = 2.5e-29 Identity = 63/123 (51.22%), Postives = 85/123 (69.11%), Query Frame = 0
BLAST of CSPI03G33800.1 vs. TAIR 10
Match: AT4G14920.1 (Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein ) HSP 1 Score: 68.6 bits (166), Expect = 4.7e-12 Identity = 35/98 (35.71%), Postives = 57/98 (58.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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