CSPI03G30510.1 (mRNA) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGAAAGAGGCGTGGTATATATAGTATTGACCAAAGGTGGTGGTTGTGCGGTGGTGCAGCCGTGTTGAGGGTCCAACGCGAACGCCCGCCAAACAAGCACACACCATGTTTCAAACGTTTACCCCCCAAGGACACGGTCCATGTTCCATACGCAAATGGCCCATGTCATTTAGTTATTTTTAAGCCTTCTATTTTATCTCTTAATACCTTCCCATTCGAAGAAAGAAGGAAATGGATGAGCTTGACCACAAGCTAGATCCCCTAAGATTTATTTTATAATTAATGGCAGCGGGTGATGAGAATGTGAAGACGGCTTCCTTCAAATTCTCCTGTGTATCCATCCTCCTATTTGTCTAAACGAAAAAAAAAAAAAAAACGAAATCAAATCCCCTCTCGGCCTCATCCCTCAAATCCTGTTGTTTGATTCGTTTATCCGAAATCTTGGAAATGGAAGCGGTGGCCTCAGATGTTCCCCGACCCCGGCTGACGAAGAAACCCTCTTCTTTGTCTTCTTCGTTCAGGCTTCGGTGCCCGAGCCTGAACTCCCTTCGCCTGCGTCGCATATTTGACATGTTCGATAAGAACGGGGACGGGATGATAACGACGGACGAGCTGGGTCAAGCTCTGGGGCTTCTTGGGTTGGATGCTGATGAATCGGAGCTGGATTCGACGGTCAACTCCTTCATCGAACCGGGAAATGAGGGTCTTAGGTTCGAAGACTTTGCAGCCCTGCACCAGTCGCTAAATGACACGTATTTCGGGGGAATGGTGGAGGATGAGGACGAGGATGAGAAGAGGGAAACAAGCATGTCGTCGATGTCGCAGGAAGAATCAGATCTATCGGAGGCATTCAGGGTATTCGACGAGGATGGAGATGGCTACATATCCGCCACCGAACTCCAAGTGGTTCTAAGAAAGCTGAGATTGGCGGAGGGGAATGAGATCGATAGGGTTCAGAAGATGATTTTGTCGGTTGACCGCAATCAGGATGGCCGGGTTGATTTCTTCGAATTCAAGGACATGATGCGCAGTGTTATCGTCCGGAGTTGTTGATTCGCTCGCCGTTCCATGTTCTGTTCTGTTTCCACCCTCCCAATCCAAACACCTCTCTCGGCTCTCTCATCGATCATCGTCTCATCCCCTTTCCATATTTTTATTTTCTTCTCCTCCTTTGCTTTGCCTTCTCTGTGCAACTCGTCAACCACACCCAATATTCTTCCTCCTCTTCAACCATCTATTGTATTATCAATAACCAATCATTGGTTAATTAGTTCATGCTCGAAAGAATCCACATTATTATTATTTCATAATTAATTCATGTTCACCCTCCTCCCCCTGGGTCTGCCTTCTCTGTAACTTATCCCCAATGCCTATGCCTCTTTGTCATCTCAAATATTGCGGACTCTTCTTATTTCCGCTGCAATCAATAAATATATACATCTCGTTCTCCTCTAAACCACTTCTTTACCTTCATTTTTTTCCTCTTATCATTATTGTTTTGTTTAGTTTACTATGGAATGTGATTTAGGTTGTAAAATAATTGCAATATGACAAAACTTGACATCAACTGCGCTAAAAAGCACACTTACAACCGACAATCAATGATACCTTCTTCCAATTGATTCAACTTCACTATTCTCTTCAACTACACATTG GAGAAAGAGGCGTGGTATATATAGTATTGACCAAAGGTGGTGGTTGTGCGGTGGTGCAGCCGTGTTGAGGGTCCAACGCGAACGCCCGCCAAACAAGCACACACCATGTTTCAAACGTTTACCCCCCAAGGACACGGTCCATGTTCCATACGCAAATGGCCCATGTCATTTAGTTATTTTTAAGCCTTCTATTTTATCTCTTAATACCTTCCCATTCGAAGAAAGAAGGAAATGGATGAGCTTGACCACAAGCTAGATCCCCTAAGATTTATTTTATAATTAATGGCAGCGGGTGATGAGAATGTGAAGACGGCTTCCTTCAAATTCTCCTGTGTATCCATCCTCCTATTTGTCTAAACGAAAAAAAAAAAAAAAACGAAATCAAATCCCCTCTCGGCCTCATCCCTCAAATCCTGTTGTTTGATTCGTTTATCCGAAATCTTGGAAATGGAAGCGGTGGCCTCAGATGTTCCCCGACCCCGGCTGACGAAGAAACCCTCTTCTTTGTCTTCTTCGTTCAGGCTTCGGTGCCCGAGCCTGAACTCCCTTCGCCTGCGTCGCATATTTGACATGTTCGATAAGAACGGGGACGGGATGATAACGACGGACGAGCTGGGTCAAGCTCTGGGGCTTCTTGGGTTGGATGCTGATGAATCGGAGCTGGATTCGACGGTCAACTCCTTCATCGAACCGGGAAATGAGGGTCTTAGGTTCGAAGACTTTGCAGCCCTGCACCAGTCGCTAAATGACACGTATTTCGGGGGAATGGTGGAGGATGAGGACGAGGATGAGAAGAGGGAAACAAGCATGTCGTCGATGTCGCAGGAAGAATCAGATCTATCGGAGGCATTCAGGGTATTCGACGAGGATGGAGATGGCTACATATCCGCCACCGAACTCCAAGTGGTTCTAAGAAAGCTGAGATTGGCGGAGGGGAATGAGATCGATAGGGTTCAGAAGATGATTTTGTCGGTTGACCGCAATCAGGATGGCCGGGTTGATTTCTTCGAATTCAAGGACATGATGCGCAGTGTTATCGTCCGGAGTTGTTGATTCGCTCGCCGTTCCATGTTCTGTTCTGTTTCCACCCTCCCAATCCAAACACCTCTCTCGGCTCTCTCATCGATCATCGTCTCATCCCCTTTCCATATTTTTATTTTCTTCTCCTCCTTTGCTTTGCCTTCTCTGTGCAACTCGTCAACCACACCCAATATTCTTCCTCCTCTTCAACCATCTATTGTATTATCAATAACCAATCATTGGTTAATTAGTTCATGCTCGAAAGAATCCACATTATTATTATTTCATAATTAATTCATGTTCACCCTCCTCCCCCTGGGTCTGCCTTCTCTGTAACTTATCCCCAATGCCTATGCCTCTTTGTCATCTCAAATATTGCGGACTCTTCTTATTTCCGCTGCAATCAATAAATATATACATCTCGTTCTCCTCTAAACCACTTCTTTACCTTCATTTTTTTCCTCTTATCATTATTGTTTTGTTTAGTTTACTATGGAATGTGATTTAGGTTGTAAAATAATTGCAATATGACAAAACTTGACATCAACTGCGCTAAAAAGCACACTTACAACCGACAATCAATGATACCTTCTTCCAATTGATTCAACTTCACTATTCTCTTCAACTACACATTG ATGGAAGCGGTGGCCTCAGATGTTCCCCGACCCCGGCTGACGAAGAAACCCTCTTCTTTGTCTTCTTCGTTCAGGCTTCGGTGCCCGAGCCTGAACTCCCTTCGCCTGCGTCGCATATTTGACATGTTCGATAAGAACGGGGACGGGATGATAACGACGGACGAGCTGGGTCAAGCTCTGGGGCTTCTTGGGTTGGATGCTGATGAATCGGAGCTGGATTCGACGGTCAACTCCTTCATCGAACCGGGAAATGAGGGTCTTAGGTTCGAAGACTTTGCAGCCCTGCACCAGTCGCTAAATGACACGTATTTCGGGGGAATGGTGGAGGATGAGGACGAGGATGAGAAGAGGGAAACAAGCATGTCGTCGATGTCGCAGGAAGAATCAGATCTATCGGAGGCATTCAGGGTATTCGACGAGGATGGAGATGGCTACATATCCGCCACCGAACTCCAAGTGGTTCTAAGAAAGCTGAGATTGGCGGAGGGGAATGAGATCGATAGGGTTCAGAAGATGATTTTGTCGGTTGACCGCAATCAGGATGGCCGGGTTGATTTCTTCGAATTCAAGGACATGATGCGCAGTGTTATCGTCCGGAGTTGTTGA MEAVASDVPRPRLTKKPSSLSSSFRLRCPSLNSLRLRRIFDMFDKNGDGMITTDELGQALGLLGLDADESELDSTVNSFIEPGNEGLRFEDFAALHQSLNDTYFGGMVEDEDEDEKRETSMSSMSQEESDLSEAFRVFDEDGDGYISATELQVVLRKLRLAEGNEIDRVQKMILSVDRNQDGRVDFFEFKDMMRSVIVRSC* Homology
BLAST of CSPI03G30510.1 vs. ExPASy Swiss-Prot
Match: P43187 (Calcium-binding allergen Bet v 3 OS=Betula pendula OX=3505 GN=BETVIII PE=1 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 4.5e-61 Identity = 126/186 (67.74%), Postives = 151/186 (81.18%), Query Frame = 0
BLAST of CSPI03G30510.1 vs. ExPASy Swiss-Prot
Match: Q9SVG9 (Calcium-binding protein CML42 OS=Arabidopsis thaliana OX=3702 GN=CML42 PE=1 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 2.5e-59 Identity = 120/187 (64.17%), Postives = 154/187 (82.35%), Query Frame = 0
BLAST of CSPI03G30510.1 vs. ExPASy Swiss-Prot
Match: Q09011 (Calcium-binding protein CAST OS=Solanum tuberosum OX=4113 PE=2 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 1.7e-55 Identity = 120/185 (64.86%), Postives = 142/185 (76.76%), Query Frame = 0
BLAST of CSPI03G30510.1 vs. ExPASy Swiss-Prot
Match: Q9FI19 (Probable calcium-binding protein CML43 OS=Arabidopsis thaliana OX=3702 GN=CML43 PE=2 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 8.2e-55 Identity = 117/186 (62.90%), Postives = 141/186 (75.81%), Query Frame = 0
BLAST of CSPI03G30510.1 vs. ExPASy Swiss-Prot
Match: Q10LX4 (Probable calcium-binding protein CML27 OS=Oryza sativa subsp. japonica OX=39947 GN=CML27 PE=2 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 1.2e-45 Identity = 104/189 (55.03%), Postives = 132/189 (69.84%), Query Frame = 0
BLAST of CSPI03G30510.1 vs. ExPASy TrEMBL
Match: A0A0A0LA10 (Calcium binding protein/cast OS=Cucumis sativus OX=3659 GN=Csa_3G727960 PE=4 SV=1) HSP 1 Score: 388.7 bits (997), Expect = 1.5e-104 Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of CSPI03G30510.1 vs. ExPASy TrEMBL
Match: A0A5A7TQ56 (Calcium-binding allergen Bet v 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00090 PE=4 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 2.8e-98 Identity = 193/201 (96.02%), Postives = 195/201 (97.01%), Query Frame = 0
BLAST of CSPI03G30510.1 vs. ExPASy TrEMBL
Match: A0A1S3B620 (calcium-binding allergen Bet v 3 OS=Cucumis melo OX=3656 GN=LOC103486221 PE=4 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 2.8e-98 Identity = 193/201 (96.02%), Postives = 195/201 (97.01%), Query Frame = 0
BLAST of CSPI03G30510.1 vs. ExPASy TrEMBL
Match: A0A6J1J521 (calcium-binding allergen Bet v 3-like OS=Cucurbita maxima OX=3661 GN=LOC111481430 PE=4 SV=1) HSP 1 Score: 347.8 bits (891), Expect = 3.0e-92 Identity = 181/202 (89.60%), Postives = 192/202 (95.05%), Query Frame = 0
BLAST of CSPI03G30510.1 vs. ExPASy TrEMBL
Match: A0A6J1F9I1 (calcium-binding allergen Bet v 3-like OS=Cucurbita moschata OX=3662 GN=LOC111442046 PE=4 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 2.5e-91 Identity = 181/202 (89.60%), Postives = 190/202 (94.06%), Query Frame = 0
BLAST of CSPI03G30510.1 vs. NCBI nr
Match: XP_004137668.1 (calcium-binding protein CML42 [Cucumis sativus] >KGN58678.1 hypothetical protein Csa_002212 [Cucumis sativus]) HSP 1 Score: 388.7 bits (997), Expect = 3.2e-104 Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of CSPI03G30510.1 vs. NCBI nr
Match: XP_008442311.1 (PREDICTED: calcium-binding allergen Bet v 3 [Cucumis melo] >KAA0044236.1 calcium-binding allergen Bet v 3 [Cucumis melo var. makuwa] >TYK24898.1 calcium-binding allergen Bet v 3 [Cucumis melo var. makuwa]) HSP 1 Score: 367.9 bits (943), Expect = 5.8e-98 Identity = 193/201 (96.02%), Postives = 195/201 (97.01%), Query Frame = 0
BLAST of CSPI03G30510.1 vs. NCBI nr
Match: XP_038905011.1 (calcium-binding protein CML42 [Benincasa hispida]) HSP 1 Score: 354.4 bits (908), Expect = 6.6e-94 Identity = 184/201 (91.54%), Postives = 189/201 (94.03%), Query Frame = 0
BLAST of CSPI03G30510.1 vs. NCBI nr
Match: XP_023527056.1 (calcium-binding allergen Bet v 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 350.1 bits (897), Expect = 1.2e-92 Identity = 183/202 (90.59%), Postives = 192/202 (95.05%), Query Frame = 0
BLAST of CSPI03G30510.1 vs. NCBI nr
Match: XP_022982604.1 (calcium-binding allergen Bet v 3-like [Cucurbita maxima]) HSP 1 Score: 347.8 bits (891), Expect = 6.2e-92 Identity = 181/202 (89.60%), Postives = 192/202 (95.05%), Query Frame = 0
BLAST of CSPI03G30510.1 vs. TAIR 10
Match: AT4G20780.1 (calmodulin like 42 ) HSP 1 Score: 229.9 bits (585), Expect = 1.8e-60 Identity = 120/187 (64.17%), Postives = 154/187 (82.35%), Query Frame = 0
BLAST of CSPI03G30510.1 vs. TAIR 10
Match: AT5G44460.1 (calmodulin like 43 ) HSP 1 Score: 214.9 bits (546), Expect = 5.8e-56 Identity = 117/186 (62.90%), Postives = 141/186 (75.81%), Query Frame = 0
BLAST of CSPI03G30510.1 vs. TAIR 10
Match: AT4G03290.1 (EF hand calcium-binding protein family ) HSP 1 Score: 111.7 bits (278), Expect = 7.0e-25 Identity = 64/164 (39.02%), Postives = 94/164 (57.32%), Query Frame = 0
BLAST of CSPI03G30510.1 vs. TAIR 10
Match: AT1G05990.1 (EF hand calcium-binding protein family ) HSP 1 Score: 105.1 bits (261), Expect = 6.5e-23 Identity = 61/164 (37.20%), Postives = 92/164 (56.10%), Query Frame = 0
BLAST of CSPI03G30510.1 vs. TAIR 10
Match: AT2G43290.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 103.6 bits (257), Expect = 1.9e-22 Identity = 65/181 (35.91%), Postives = 101/181 (55.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|