CSPI03G20800.1 (mRNA) Cucumber (PI 183967) v1

Overview
NameCSPI03G20800.1
TypemRNA
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptiontranscription factor BEE 3-like
LocationChr3: 16822598 .. 16824400 (-)
Sequence length690
RNA-Seq ExpressionCSPI03G20800.1
SyntenyCSPI03G20800.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCTTCAATATGGAAGTGATAAACCAGTTCTCTAATGCGATGGAGAGTGCGTTAGAGGATTTCAATGAAACAGAATCGTCAGTGGAAAATTTCTGGGGCTACCATTTCCAGTTACCCGAAAACACATCACCAAGCTCACTTTCCAACTTTTCTTCTGTTGCTCTACTGAAATGTCAGAAAGAGTTTCCAGTGATAACTCGAAGCAGTCTACCGGTAGATAGTGCACAAGAAACCATGAAAAGAAAAGAGAAACAAGTATCAGAAAGAAATTCAGGAATCCTTTGTGCAGCTTTTGGAAATGACAGTAGTAATGCTAGGTCTTCAAAAGCAAGTGTCAATTCTCCATCAAATTCTTTCTATTGATTTGAACTTATATTTTCTCTCTTTGAGCATTAGATATGCATCATATTTGTTATTTTGTTTACTCAGAACATGGAAGGAGGGAGGAAAAGAAGGAATTGTGAGAAAGAACAAGAAAAGCCTGGAGAAGTAGTTCATGTTAGAGCAAAACGAGGTCAAGCTACAGATAGTCACAGTTTAGCAGAAAGGGTATTTACTAAATTATGCAATATTTCTTCCTAAACACAATTAGTTTTAAGGATTGATATACTGATCTTCAATATAGAAAACAATAACCGAATAATCCAATAATAAAACAGTCTTCATATTTCAGGTGAGAAGAGAGAAAATCAACCACAAATTAAAATGCTTGCAAAACATTATTCCAGGTTGTCACAAGGTAAATTGTTTTTTTCATGGTCCAGTACAAAACATTGGAGTCTCAACTCTCATGTTCAAACAAAATTTCCAAATTATTTTGCAGTCAATGGGCATGGCGATGGTGTTGGATGAAACTATCAATTATGTTTATTCACTACAGAATCAGGTCGAGGTGAGGAATATGATAAACTTTTCATAAGTATCAATAATGTTTTCATTTAATAGCTCTGATGGACTTACTTTGTTCCTGAATTCAGTTTCTCTCAATGGAGCTTGCAGCTGCATGTTCCACTTTAGGCATAAATTTTGGCATGGGGGATAACAGAAAAGCTTTGGTACTCCAACAACTACCCAAAAGTTTATTAACTTTTGACATTTTACTTTCTACTAATGAAACCATGGAGTAAATTAGTGCCTACTTTAACTGATTTTGATTAGGGATCTGTTTCTGAAAGCATGGGAGGAAGTTACTTTTACTTTTTCATTTTGCAAAGCAAGTTACTTCCTTTATGGCAAAAATAGAAGTATGACTAGGAGAATGAAAAAAAAAAAGAATAATAAAGAAACGTATAGGCACTCGTTTATTTCAGTTCACACGAGATCTTCACTCGCCTCACTTTTTGTCTTCATAACTTCTCCTTACACAAATTTTCTCTCCACCTACCTCAAGATAATTCCTTTTGAAGAGTTTGGGTGTTGAATAAGAATCTACCATTCACACTGACGGAAAAAAAGAAACGAGGGAGGGAGGGATGTCAAGTGCAATGATATTTATTGATAGATCAACAGAAAAATGGTGTTCATTGGCTAGAGGAAGGGTAGAAGTAGGGTGGGTTTAAAAAGAAGGATAAAAAGTTAATTTTTGTCCAGACTTAATTTAACAAAAAGATCCAAAAATATGGTGGATCAAATGAGCCAGTTTGATTGGACAAAACTAAATTCCCAGGCAATCAAACAATATAAAATAAACTTCTTGCTAAGTATGGAATTCAAATTGGTGCTTTCTTTATTTATTAATATTAAAGTATTGATGTTTAAGCTTTAATTATAACACTGCAGGGGACAAGATCACATGAGGAA

mRNA sequence

ATGACCTTCAATATGGAAGTGATAAACCAGTTCTCTAATGCGATGGAGAGTGCGTTAGAGGATTTCAATGAAACAGAATCGTCAGTGGAAAATTTCTGGGGCTACCATTTCCAGTTACCCGAAAACACATCACCAAGCTCACTTTCCAACTTTTCTTCTGTTGCTCTACTGAAATGTCAGAAAGAGTTTCCAGTGATAACTCGAAGCAGTCTACCGGTAGATAGTGCACAAGAAACCATGAAAAGAAAAGAGAAACAAGTATCAGAAAGAAATTCAGGAATCCTTTGTGCAGCTTTTGGAAATGACAGTAGTAATGCTAGGTCTTCAAAAGCAAGTAACATGGAAGGAGGGAGGAAAAGAAGGAATTGTGAGAAAGAACAAGAAAAGCCTGGAGAAGTAGTTCATGTTAGAGCAAAACGAGGTCAAGCTACAGATAGTCACAGTTTAGCAGAAAGGGTGAGAAGAGAGAAAATCAACCACAAATTAAAATGCTTGCAAAACATTATTCCAGGTTGTCACAAGTCAATGGGCATGGCGATGGTGTTGGATGAAACTATCAATTATGTTTATTCACTACAGAATCAGGTCGAGTTTCTCTCAATGGAGCTTGCAGCTGCATGTTCCACTTTAGGCATAAATTTTGGCATGGGGGATAACAGAAAAGCTTTGGGGACAAGATCACATGAGGAA

Coding sequence (CDS)

ATGACCTTCAATATGGAAGTGATAAACCAGTTCTCTAATGCGATGGAGAGTGCGTTAGAGGATTTCAATGAAACAGAATCGTCAGTGGAAAATTTCTGGGGCTACCATTTCCAGTTACCCGAAAACACATCACCAAGCTCACTTTCCAACTTTTCTTCTGTTGCTCTACTGAAATGTCAGAAAGAGTTTCCAGTGATAACTCGAAGCAGTCTACCGGTAGATAGTGCACAAGAAACCATGAAAAGAAAAGAGAAACAAGTATCAGAAAGAAATTCAGGAATCCTTTGTGCAGCTTTTGGAAATGACAGTAGTAATGCTAGGTCTTCAAAAGCAAGTAACATGGAAGGAGGGAGGAAAAGAAGGAATTGTGAGAAAGAACAAGAAAAGCCTGGAGAAGTAGTTCATGTTAGAGCAAAACGAGGTCAAGCTACAGATAGTCACAGTTTAGCAGAAAGGGTGAGAAGAGAGAAAATCAACCACAAATTAAAATGCTTGCAAAACATTATTCCAGGTTGTCACAAGTCAATGGGCATGGCGATGGTGTTGGATGAAACTATCAATTATGTTTATTCACTACAGAATCAGGTCGAGTTTCTCTCAATGGAGCTTGCAGCTGCATGTTCCACTTTAGGCATAAATTTTGGCATGGGGGATAACAGAAAAGCTTTGGGGACAAGATCACATGAGGAA

Protein sequence

MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQKEFPVITRSSLPVDSAQETMKRKEKQVSERNSGILCAAFGNDSSNARSSKASNMEGGRKRRNCEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE
Homology
BLAST of CSPI03G20800.1 vs. ExPASy Swiss-Prot
Match: Q8GZ13 (Transcription factor BEE 1 OS=Arabidopsis thaliana OX=3702 GN=BEE1 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 7.2e-31
Identity = 94/205 (45.85%), Postives = 127/205 (61.95%), Query Frame = 0

Query: 20  EDFNETESSVENFWGYHFQ-----LPENTSPSSLSNFSSVALLKCQKEFPVITRSSLPVD 79
           + F+ + +S+E+ + +H Q      P N SP S +NFSS             T S L  D
Sbjct: 38  QTFHPSSTSLESLFLHHHQQQLLHFPGN-SPDSSNNFSS-------------TSSFLHSD 97

Query: 80  S--AQETMKRK---EKQVSERNSGILCAAFGNDSSNARSSKASNMEGGRK-RRNCEKEQE 139
                ET KRK       S   SG+      +D++N  +++  ++  G++ ++  E+E E
Sbjct: 98  HNIVDETKKRKALLPTLSSSETSGV------SDNTNVIATETGSLRRGKRLKKKKEEEDE 157

Query: 140 KPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLDETINY 199
           K  EVVHVRA+RGQATDSHSLAERVRR KIN +L+CLQ+++PGC+K+MGMA +LDE INY
Sbjct: 158 KEREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINY 217

Query: 200 VYSLQNQVEFLSMELAAACSTLGIN 214
           V SLQNQVEFLSM+L AA S    N
Sbjct: 218 VQSLQNQVEFLSMKLTAASSFYDFN 222

BLAST of CSPI03G20800.1 vs. ExPASy Swiss-Prot
Match: Q8GWK7 (Transcription factor BEE 3 OS=Arabidopsis thaliana OX=3702 GN=BEE3 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.6e-30
Identity = 91/199 (45.73%), Postives = 121/199 (60.80%), Query Frame = 0

Query: 27  SSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQKEFPVITRSSLPVDSAQETMKRK--- 86
           SS+++ + +H Q P++    SL N     +      FP   +++    S  +T KRK   
Sbjct: 39  SSLDSLF-FHNQFPDHFPGKSLENNFHQGIF-----FPSNIQNNEESSSQFDTKKRKSLM 98

Query: 87  ------EKQVSER---NSGILCAAFGNDSSNARSSKASNMEGGRKRRNCEKEQEKPGEVV 146
                 E  VS++    S    +  GN S+   SS+       R +R+  +E+EK  EVV
Sbjct: 99  EAVSTSENSVSDQTLSTSSAQVSINGNISTKNNSSR-------RGKRSKNREEEKEREVV 158

Query: 147 HVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLDETINYVYSLQN 206
           HVRA+RGQATDSHS+AERVRR KIN +LKCLQ+I+PGC+K+MGMA +LDE INYV SLQN
Sbjct: 159 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 218

Query: 207 QVEFLSMELAAACSTLGIN 214
           QVEFLSM+L AA S    N
Sbjct: 219 QVEFLSMKLTAASSYYDFN 224

BLAST of CSPI03G20800.1 vs. ExPASy Swiss-Prot
Match: A4D998 (Transcription factor bHLH75 OS=Arabidopsis thaliana OX=3702 GN=BHLH75 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 4.0e-29
Identity = 69/113 (61.06%), Postives = 86/113 (76.11%), Query Frame = 0

Query: 110 KASNMEGGRKRRNCEKEQE---------KPGEVVHVRAKRGQATDSHSLAERVRREKINH 169
           K +  E G KRR    E+E         KP +VVHVRAKRGQATDSHSLAERVRREKIN 
Sbjct: 69  KGNKEESGSKRRRKRSEEEEAMNGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINE 128

Query: 170 KLKCLQNIIPGCHKSMGMAMVLDETINYVYSLQNQVEFLSMELAAACSTLGIN 214
           +LKCLQ+++PGC+K+MGMA++LD  I+YV SLQNQ+EFLSM+L+AA +   +N
Sbjct: 129 RLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSMKLSAASACYDLN 181

BLAST of CSPI03G20800.1 vs. ExPASy Swiss-Prot
Match: Q9FJL4 (Transcription factor bHLH78 OS=Arabidopsis thaliana OX=3702 GN=BHLH78 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.5e-24
Identity = 66/146 (45.21%), Postives = 90/146 (61.64%), Query Frame = 0

Query: 81  KRKEKQVSERNSGILCAAFGNDSSNARSSKASNMEGGRKRRNCEKEQEKPGE-------- 140
           K KE  +S  +     +     +     SK+S  +GG++RR  E ++E+ GE        
Sbjct: 229 KSKENPISTASPSPSFSKTAEKNGGKGGSKSSEEKGGKRRREEEDDEEEEGEGEGNKSNN 288

Query: 141 ---------VVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLD 200
                     +HVRA+RGQATDSHSLAERVRREKI  ++K LQ+++PGC+K  G A++LD
Sbjct: 289 TKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLD 348

Query: 201 ETINYVYSLQNQVEFLSMELAAACST 210
           E INYV SLQ QVEFLSM+L++   T
Sbjct: 349 EIINYVQSLQRQVEFLSMKLSSVNDT 374

BLAST of CSPI03G20800.1 vs. ExPASy Swiss-Prot
Match: Q9LV17 (Transcription factor bHLH79 OS=Arabidopsis thaliana OX=3702 GN=BHLH79 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.5e-23
Identity = 75/158 (47.47%), Postives = 97/158 (61.39%), Query Frame = 0

Query: 69  SSLPVDSAQETMKRKEKQVSERNSGILCAA-FGN-DSSNARSSKASNMEGGRKRRNCEKE 128
           SS  V S+    + KE    +R    LC +  GN D S     + S+  GG K    + +
Sbjct: 87  SSKMVSSSSSGNELKESGDKKRK---LCGSESGNGDGSMRPEGETSSGGGGSKATEQKNK 146

Query: 129 QEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLDETI 188
            E P + +HVRA+RGQATD HSLAER RREKI+ K+  LQ+IIPGC+K +G A+VLDE I
Sbjct: 147 PEPPKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEII 206

Query: 189 NYVYSLQNQVEFLSMEL------AAACSTLGINFGMGD 219
           NY+ SLQ QVEFLSM+L      A+   T+G+ F  GD
Sbjct: 207 NYIQSLQRQVEFLSMKLEVVNSGASTGPTIGV-FPSGD 240

BLAST of CSPI03G20800.1 vs. ExPASy TrEMBL
Match: A0A0A0LCH4 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G282490 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 1.8e-117
Identity = 225/230 (97.83%), Postives = 225/230 (97.83%), Query Frame = 0

Query: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60
           MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ
Sbjct: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60

Query: 61  KEFPVITRSSLPVDSAQETMKRKEKQVSERNSGILCAAFGNDSSNARSSKASNMEGGRKR 120
           KEFPVITRSSLPVDS  ETMKRKEKQVSERNSGILCAAFGNDSSNARSSK  NMEGGRKR
Sbjct: 61  KEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSK--NMEGGRKR 120

Query: 121 RNCEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 180
           RN EKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM
Sbjct: 121 RNYEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 180

Query: 181 VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE 231
           VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE
Sbjct: 181 VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE 228

BLAST of CSPI03G20800.1 vs. ExPASy TrEMBL
Match: A0A5A7SQR9 (Transcription factor BEE 3-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold428G00060 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 8.1e-110
Identity = 212/220 (96.36%), Postives = 214/220 (97.27%), Query Frame = 0

Query: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60
           MTFNMEVINQFSNA ES LEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ
Sbjct: 20  MTFNMEVINQFSNATESVLEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 79

Query: 61  KEFPVITRSSLPVDSAQETMKRKEKQVSERNSGILCAAFGNDSSNARSSKASNMEGGRKR 120
           K+FPVITRSSL VDSAQETMKRKEKQVSE NSGILCAAFGNDSSNARSSKASN+ GGRKR
Sbjct: 80  KDFPVITRSSLLVDSAQETMKRKEKQVSESNSGILCAAFGNDSSNARSSKASNLGGGRKR 139

Query: 121 RNCEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 180
           RNCEKEQEKPG VVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM
Sbjct: 140 RNCEKEQEKPG-VVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 199

Query: 181 VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNR 221
           VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNR
Sbjct: 200 VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNR 238

BLAST of CSPI03G20800.1 vs. ExPASy TrEMBL
Match: A0A1S3C4G7 (transcription factor BEE 3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496786 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.7e-107
Identity = 210/220 (95.45%), Postives = 212/220 (96.36%), Query Frame = 0

Query: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60
           MTFNMEVINQFSNA ES LEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ
Sbjct: 20  MTFNMEVINQFSNATESVLEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 79

Query: 61  KEFPVITRSSLPVDSAQETMKRKEKQVSERNSGILCAAFGNDSSNARSSKASNMEGGRKR 120
           K+FPVITRSSL VDSAQETMKRKEKQVSE NSGILCAAFGNDSSNARSSK  N+ GGRKR
Sbjct: 80  KDFPVITRSSLLVDSAQETMKRKEKQVSESNSGILCAAFGNDSSNARSSK--NLGGGRKR 139

Query: 121 RNCEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 180
           RNCEKEQEKPG VVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM
Sbjct: 140 RNCEKEQEKPG-VVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 199

Query: 181 VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNR 221
           VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNR
Sbjct: 200 VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNR 236

BLAST of CSPI03G20800.1 vs. ExPASy TrEMBL
Match: A0A1S3C5R8 (transcription factor BEE 3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496786 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.1e-101
Identity = 201/211 (95.26%), Postives = 203/211 (96.21%), Query Frame = 0

Query: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60
           MTFNMEVINQFSNA ES LEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ
Sbjct: 20  MTFNMEVINQFSNATESVLEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 79

Query: 61  KEFPVITRSSLPVDSAQETMKRKEKQVSERNSGILCAAFGNDSSNARSSKASNMEGGRKR 120
           K+FPVITRSSL VDSAQETMKRKEKQVSE NSGILCAAFGNDSSNARSSK  N+ GGRKR
Sbjct: 80  KDFPVITRSSLLVDSAQETMKRKEKQVSESNSGILCAAFGNDSSNARSSK--NLGGGRKR 139

Query: 121 RNCEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 180
           RNCEKEQEKPG VVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM
Sbjct: 140 RNCEKEQEKPG-VVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 199

Query: 181 VLDETINYVYSLQNQVEFLSMELAAACSTLG 212
           VLDETINYVYSLQNQVEFLSMELAAACSTLG
Sbjct: 200 VLDETINYVYSLQNQVEFLSMELAAACSTLG 227

BLAST of CSPI03G20800.1 vs. ExPASy TrEMBL
Match: A0A6J1D4W9 (transcription factor bHLH75-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016970 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 5.5e-90
Identity = 181/227 (79.74%), Postives = 196/227 (86.34%), Query Frame = 0

Query: 4   NMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQKEF 63
           NMEVINQFSN  ES LE  NETE SVENF GY+FQLPEN +PS  S+F  V L+KCQ EF
Sbjct: 24  NMEVINQFSNMTESMLEGLNETEFSVENFLGYNFQLPENATPSLTSDFPCVTLVKCQNEF 83

Query: 64  PVITRSSLPVDSAQETMKRKEKQVSERNSGILCAAFGNDSSNARSSKASNMEGGRKRRNC 123
           P ITRSSL VD AQ+TMK K KQVSE +S   CAAFGNDSSNAR+ K  N+ GGRKRRNC
Sbjct: 84  PAITRSSLMVDKAQKTMKIKAKQVSESSSETPCAAFGNDSSNARNLK--NLRGGRKRRNC 143

Query: 124 EKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLD 183
           EKE +KP EVVHVRAKRGQATDSHSLAERVRREKIN+KLKCLQN+IPGCHK+MGMAMVLD
Sbjct: 144 EKEPKKPAEVVHVRAKRGQATDSHSLAERVRREKINNKLKCLQNLIPGCHKTMGMAMVLD 203

Query: 184 ETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE 231
           ETINYV+SLQNQVEFLSMELAAACS+LGINFG+G  RKALGTRSHEE
Sbjct: 204 ETINYVHSLQNQVEFLSMELAAACSSLGINFGVGAIRKALGTRSHEE 248

BLAST of CSPI03G20800.1 vs. NCBI nr
Match: XP_011651380.1 (transcription factor BEE 3 isoform X2 [Cucumis sativus] >KAE8650584.1 hypothetical protein Csa_009638 [Cucumis sativus])

HSP 1 Score: 431.8 bits (1109), Expect = 3.7e-117
Identity = 225/230 (97.83%), Postives = 225/230 (97.83%), Query Frame = 0

Query: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60
           MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ
Sbjct: 20  MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 79

Query: 61  KEFPVITRSSLPVDSAQETMKRKEKQVSERNSGILCAAFGNDSSNARSSKASNMEGGRKR 120
           KEFPVITRSSLPVDS  ETMKRKEKQVSERNSGILCAAFGNDSSNARSSK  NMEGGRKR
Sbjct: 80  KEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSK--NMEGGRKR 139

Query: 121 RNCEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 180
           RN EKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM
Sbjct: 140 RNYEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 199

Query: 181 VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE 231
           VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE
Sbjct: 200 VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE 247

BLAST of CSPI03G20800.1 vs. NCBI nr
Match: XP_031739136.1 (transcription factor BEE 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 417.2 bits (1071), Expect = 9.5e-113
Identity = 218/223 (97.76%), Postives = 218/223 (97.76%), Query Frame = 0

Query: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60
           MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ
Sbjct: 20  MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 79

Query: 61  KEFPVITRSSLPVDSAQETMKRKEKQVSERNSGILCAAFGNDSSNARSSKASNMEGGRKR 120
           KEFPVITRSSLPVDS  ETMKRKEKQVSERNSGILCAAFGNDSSNARSSK  NMEGGRKR
Sbjct: 80  KEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSK--NMEGGRKR 139

Query: 121 RNCEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 180
           RN EKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM
Sbjct: 140 RNYEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 199

Query: 181 VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKAL 224
           VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKAL
Sbjct: 200 VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKAL 240

BLAST of CSPI03G20800.1 vs. NCBI nr
Match: KAA0032763.1 (transcription factor BEE 3-like isoform X1 [Cucumis melo var. makuwa] >TYK23931.1 transcription factor BEE 3-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 406.4 bits (1043), Expect = 1.7e-109
Identity = 212/220 (96.36%), Postives = 214/220 (97.27%), Query Frame = 0

Query: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60
           MTFNMEVINQFSNA ES LEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ
Sbjct: 20  MTFNMEVINQFSNATESVLEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 79

Query: 61  KEFPVITRSSLPVDSAQETMKRKEKQVSERNSGILCAAFGNDSSNARSSKASNMEGGRKR 120
           K+FPVITRSSL VDSAQETMKRKEKQVSE NSGILCAAFGNDSSNARSSKASN+ GGRKR
Sbjct: 80  KDFPVITRSSLLVDSAQETMKRKEKQVSESNSGILCAAFGNDSSNARSSKASNLGGGRKR 139

Query: 121 RNCEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 180
           RNCEKEQEKPG VVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM
Sbjct: 140 RNCEKEQEKPG-VVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 199

Query: 181 VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNR 221
           VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNR
Sbjct: 200 VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNR 238

BLAST of CSPI03G20800.1 vs. NCBI nr
Match: XP_008456996.1 (PREDICTED: transcription factor BEE 3-like isoform X1 [Cucumis melo])

HSP 1 Score: 398.7 bits (1023), Expect = 3.5e-107
Identity = 210/220 (95.45%), Postives = 212/220 (96.36%), Query Frame = 0

Query: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60
           MTFNMEVINQFSNA ES LEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ
Sbjct: 20  MTFNMEVINQFSNATESVLEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 79

Query: 61  KEFPVITRSSLPVDSAQETMKRKEKQVSERNSGILCAAFGNDSSNARSSKASNMEGGRKR 120
           K+FPVITRSSL VDSAQETMKRKEKQVSE NSGILCAAFGNDSSNARSSK  N+ GGRKR
Sbjct: 80  KDFPVITRSSLLVDSAQETMKRKEKQVSESNSGILCAAFGNDSSNARSSK--NLGGGRKR 139

Query: 121 RNCEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 180
           RNCEKEQEKPG VVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM
Sbjct: 140 RNCEKEQEKPG-VVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 199

Query: 181 VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNR 221
           VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNR
Sbjct: 200 VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNR 236

BLAST of CSPI03G20800.1 vs. NCBI nr
Match: XP_008456998.1 (PREDICTED: transcription factor BEE 3-like isoform X2 [Cucumis melo])

HSP 1 Score: 379.4 bits (973), Expect = 2.2e-101
Identity = 201/211 (95.26%), Postives = 203/211 (96.21%), Query Frame = 0

Query: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60
           MTFNMEVINQFSNA ES LEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ
Sbjct: 20  MTFNMEVINQFSNATESVLEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 79

Query: 61  KEFPVITRSSLPVDSAQETMKRKEKQVSERNSGILCAAFGNDSSNARSSKASNMEGGRKR 120
           K+FPVITRSSL VDSAQETMKRKEKQVSE NSGILCAAFGNDSSNARSSK  N+ GGRKR
Sbjct: 80  KDFPVITRSSLLVDSAQETMKRKEKQVSESNSGILCAAFGNDSSNARSSK--NLGGGRKR 139

Query: 121 RNCEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 180
           RNCEKEQEKPG VVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM
Sbjct: 140 RNCEKEQEKPG-VVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 199

Query: 181 VLDETINYVYSLQNQVEFLSMELAAACSTLG 212
           VLDETINYVYSLQNQVEFLSMELAAACSTLG
Sbjct: 200 VLDETINYVYSLQNQVEFLSMELAAACSTLG 227

BLAST of CSPI03G20800.1 vs. TAIR 10
Match: AT1G18400.1 (BR enhanced expression 1 )

HSP 1 Score: 135.6 bits (340), Expect = 5.1e-32
Identity = 94/205 (45.85%), Postives = 127/205 (61.95%), Query Frame = 0

Query: 20  EDFNETESSVENFWGYHFQ-----LPENTSPSSLSNFSSVALLKCQKEFPVITRSSLPVD 79
           + F+ + +S+E+ + +H Q      P N SP S +NFSS             T S L  D
Sbjct: 38  QTFHPSSTSLESLFLHHHQQQLLHFPGN-SPDSSNNFSS-------------TSSFLHSD 97

Query: 80  S--AQETMKRK---EKQVSERNSGILCAAFGNDSSNARSSKASNMEGGRK-RRNCEKEQE 139
                ET KRK       S   SG+      +D++N  +++  ++  G++ ++  E+E E
Sbjct: 98  HNIVDETKKRKALLPTLSSSETSGV------SDNTNVIATETGSLRRGKRLKKKKEEEDE 157

Query: 140 KPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLDETINY 199
           K  EVVHVRA+RGQATDSHSLAERVRR KIN +L+CLQ+++PGC+K+MGMA +LDE INY
Sbjct: 158 KEREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINY 217

Query: 200 VYSLQNQVEFLSMELAAACSTLGIN 214
           V SLQNQVEFLSM+L AA S    N
Sbjct: 218 VQSLQNQVEFLSMKLTAASSFYDFN 222

BLAST of CSPI03G20800.1 vs. TAIR 10
Match: AT1G73830.1 (BR enhanced expression 3 )

HSP 1 Score: 133.3 bits (334), Expect = 2.5e-31
Identity = 91/199 (45.73%), Postives = 121/199 (60.80%), Query Frame = 0

Query: 27  SSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQKEFPVITRSSLPVDSAQETMKRK--- 86
           SS+++ + +H Q P++    SL N     +      FP   +++    S  +T KRK   
Sbjct: 39  SSLDSLF-FHNQFPDHFPGKSLENNFHQGIF-----FPSNIQNNEESSSQFDTKKRKSLM 98

Query: 87  ------EKQVSER---NSGILCAAFGNDSSNARSSKASNMEGGRKRRNCEKEQEKPGEVV 146
                 E  VS++    S    +  GN S+   SS+       R +R+  +E+EK  EVV
Sbjct: 99  EAVSTSENSVSDQTLSTSSAQVSINGNISTKNNSSR-------RGKRSKNREEEKEREVV 158

Query: 147 HVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLDETINYVYSLQN 206
           HVRA+RGQATDSHS+AERVRR KIN +LKCLQ+I+PGC+K+MGMA +LDE INYV SLQN
Sbjct: 159 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 218

Query: 207 QVEFLSMELAAACSTLGIN 214
           QVEFLSM+L AA S    N
Sbjct: 219 QVEFLSMKLTAASSYYDFN 224

BLAST of CSPI03G20800.1 vs. TAIR 10
Match: AT1G73830.2 (BR enhanced expression 3 )

HSP 1 Score: 133.3 bits (334), Expect = 2.5e-31
Identity = 91/199 (45.73%), Postives = 121/199 (60.80%), Query Frame = 0

Query: 27  SSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQKEFPVITRSSLPVDSAQETMKRK--- 86
           SS+++ + +H Q P++    SL N     +      FP   +++    S  +T KRK   
Sbjct: 39  SSLDSLF-FHNQFPDHFPGKSLENNFHQGIF-----FPSNIQNNEESSSQFDTKKRKSLM 98

Query: 87  ------EKQVSER---NSGILCAAFGNDSSNARSSKASNMEGGRKRRNCEKEQEKPGEVV 146
                 E  VS++    S    +  GN S+   SS+       R +R+  +E+EK  EVV
Sbjct: 99  EAVSTSENSVSDQTLSTSSAQVSINGNISTKNNSSR-------RGKRSKNREEEKEREVV 158

Query: 147 HVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLDETINYVYSLQN 206
           HVRA+RGQATDSHS+AERVRR KIN +LKCLQ+I+PGC+K+MGMA +LDE INYV SLQN
Sbjct: 159 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 218

Query: 207 QVEFLSMELAAACSTLGIN 214
           QVEFLSM+L AA S    N
Sbjct: 219 QVEFLSMKLTAASSYYDFN 224

BLAST of CSPI03G20800.1 vs. TAIR 10
Match: AT1G25330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 129.8 bits (325), Expect = 2.8e-30
Identity = 69/113 (61.06%), Postives = 86/113 (76.11%), Query Frame = 0

Query: 110 KASNMEGGRKRRNCEKEQE---------KPGEVVHVRAKRGQATDSHSLAERVRREKINH 169
           K +  E G KRR    E+E         KP +VVHVRAKRGQATDSHSLAERVRREKIN 
Sbjct: 69  KGNKEESGSKRRRKRSEEEEAMNGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINE 128

Query: 170 KLKCLQNIIPGCHKSMGMAMVLDETINYVYSLQNQVEFLSMELAAACSTLGIN 214
           +LKCLQ+++PGC+K+MGMA++LD  I+YV SLQNQ+EFLSM+L+AA +   +N
Sbjct: 129 RLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSMKLSAASACYDLN 181

BLAST of CSPI03G20800.1 vs. TAIR 10
Match: AT5G48560.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 112.1 bits (279), Expect = 6.1e-25
Identity = 66/146 (45.21%), Postives = 90/146 (61.64%), Query Frame = 0

Query: 81  KRKEKQVSERNSGILCAAFGNDSSNARSSKASNMEGGRKRRNCEKEQEKPGE-------- 140
           K KE  +S  +     +     +     SK+S  +GG++RR  E ++E+ GE        
Sbjct: 229 KSKENPISTASPSPSFSKTAEKNGGKGGSKSSEEKGGKRRREEEDDEEEEGEGEGNKSNN 288

Query: 141 ---------VVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLD 200
                     +HVRA+RGQATDSHSLAERVRREKI  ++K LQ+++PGC+K  G A++LD
Sbjct: 289 TKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLD 348

Query: 201 ETINYVYSLQNQVEFLSMELAAACST 210
           E INYV SLQ QVEFLSM+L++   T
Sbjct: 349 EIINYVQSLQRQVEFLSMKLSSVNDT 374

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8GZ137.2e-3145.85Transcription factor BEE 1 OS=Arabidopsis thaliana OX=3702 GN=BEE1 PE=1 SV=1[more]
Q8GWK73.6e-3045.73Transcription factor BEE 3 OS=Arabidopsis thaliana OX=3702 GN=BEE3 PE=2 SV=1[more]
A4D9984.0e-2961.06Transcription factor bHLH75 OS=Arabidopsis thaliana OX=3702 GN=BHLH75 PE=2 SV=1[more]
Q9FJL48.5e-2445.21Transcription factor bHLH78 OS=Arabidopsis thaliana OX=3702 GN=BHLH78 PE=1 SV=1[more]
Q9LV175.5e-2347.47Transcription factor bHLH79 OS=Arabidopsis thaliana OX=3702 GN=BHLH79 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LCH41.8e-11797.83BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G282490 PE=4 S... [more]
A0A5A7SQR98.1e-11096.36Transcription factor BEE 3-like isoform X1 OS=Cucumis melo var. makuwa OX=119469... [more]
A0A1S3C4G71.7e-10795.45transcription factor BEE 3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034967... [more]
A0A1S3C5R81.1e-10195.26transcription factor BEE 3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034967... [more]
A0A6J1D4W95.5e-9079.74transcription factor bHLH75-like isoform X2 OS=Momordica charantia OX=3673 GN=LO... [more]
Match NameE-valueIdentityDescription
XP_011651380.13.7e-11797.83transcription factor BEE 3 isoform X2 [Cucumis sativus] >KAE8650584.1 hypothetic... [more]
XP_031739136.19.5e-11397.76transcription factor BEE 3 isoform X1 [Cucumis sativus][more]
KAA0032763.11.7e-10996.36transcription factor BEE 3-like isoform X1 [Cucumis melo var. makuwa] >TYK23931.... [more]
XP_008456996.13.5e-10795.45PREDICTED: transcription factor BEE 3-like isoform X1 [Cucumis melo][more]
XP_008456998.12.2e-10195.26PREDICTED: transcription factor BEE 3-like isoform X2 [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT1G18400.15.1e-3245.85BR enhanced expression 1 [more]
AT1G73830.12.5e-3145.73BR enhanced expression 3 [more]
AT1G73830.22.5e-3145.73BR enhanced expression 3 [more]
AT1G25330.12.8e-3061.06basic helix-loop-helix (bHLH) DNA-binding superfamily protein [more]
AT5G48560.16.1e-2545.21basic helix-loop-helix (bHLH) DNA-binding superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 148..198
e-value: 5.5E-8
score: 42.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 146..193
e-value: 2.7E-7
score: 30.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 142..192
score: 14.690826
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 138..201
e-value: 2.6E-14
score: 54.6
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 140..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..131
NoneNo IPR availablePANTHERPTHR12565:SF340TRANSCRIPTION FACTOR BEE 1coord: 4..213
IPR024097Basic helix-loop-helix leucine zipper transcription factorPANTHERPTHR12565STEROL REGULATORY ELEMENT-BINDING PROTEINcoord: 4..213

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CSPI03G20800CSPI03G20800gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI03G20800.mrna.cds.6CSPI03G20800.mrna.cds.6CDS
CSPI03G20800.mrna.cds.5CSPI03G20800.mrna.cds.5CDS
CSPI03G20800.mrna.cds.4CSPI03G20800.mrna.cds.4CDS
CSPI03G20800.mrna.cds.3CSPI03G20800.mrna.cds.3CDS
CSPI03G20800.mrna.cds.2CSPI03G20800.mrna.cds.2CDS
CSPI03G20800.mrna.cds.1CSPI03G20800.mrna.cds.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CSPI03G20800.1CSPI03G20800.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0046983 protein dimerization activity