CSPI03G20160.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI03G20160.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Zinc finger BED domain-containing protein DAYSLEEPER-like
Location	Chr3: 15961346 .. 15962760 (+)
Sequence length	591
RNA-Seq Expression	CSPI03G20160.1
Synteny	CSPI03G20160.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTCCAAGTTTGAAAAGTATTGGAGTGTGATTCATGGTGTGTTGGCAATAGCAACAATATTAGATCCTAGATTCAAGATGAGATTGGTTGAGTTTTATTTTCCTCAAATCTATGGATCTCATTATACTGTAGAAATTGAACTTGTTAGAGAATTGTGTTGTGATTTGATGAAGGTTTATAGTTCAAGATCAAGTATAATAGAAGAACCTCAACGTTCTGCATCTACATCTTATTCGACTTCAAAGCGGGATGGAAGTAGTAGGAAAACTTCTCTTGCTAATAGGAAAGATCGCCACCTTAAGTTTAAAGTGTTTGTTAGTAATATGGAGAATGATGTTGACAATGTCAAATCAGAGCTTGATCGTTATTTGGATGAATCTCTTTTACCACGAACATAAGACTTTAACATTTTGCAATGGTGGAAATTGAATGAAGTCAAGTATAATGTTTTGTATGAAATTGCAAAGGATGTTCTAGCTGTTCCCATCACTACTGTTGCTTCTGAATCTTAGTATTGGTGGTAGACATATAGGTCCACGTCATTCTCAAATTCATGTAAACTTATTGGAAGCTTTGATGTGTACTCAAGATTGGCTACGGACCAAAGGTATGAGTTAATACTATTGTTTAGATTATTTAACAATTTTTTACTCACTGCGATTTGAGCTCTATTTTTTTTTTTTTTTTTTTTTGTATATGGCTCACATAGATAAGCATACTTCTATTGATGCTAAAGTGTTAGAAAATGGTCTTCACGGTCAAGACATAGACGATGATGTAAGTAATAAGTTTGCACATTATTATTATTTTAAAAACATTTATTGATACCAATTTGTATAATATTTTTTTCAGGGATCATTTCCTACAAAATTGGATGAAATTCGTTCATGGTTTGACTTTACTTTGTTATGTGGCCTTGAACTGTATTTTGTAATCTTCTCTTAAAAAATTTGTTGTTATTTCTTTAAAAATATTATCTAATTGAAGACTTTGTTAGAATAGTTATTGATTGATTTTTTTTTTTTAATGAATTTATGCATGGATTTCTAAATGCTTCTAATAATTGAATTTATTTTTATAAACAATGAGAATTGCCGTTTTAATTCTATTCAATAAGAAAATTCATAATATTCTATTAAAAATAAAACATTGAAAATCTATACATATTTAAAGTAATTGTGGAATGACGAATAAACTTTTTAAAAAAACTATACATATTTCAAGTAGATGTGCAATTAAAAATGAGATAAAAACTAGAAAAAAAATGAGAAAAAAACTTTTTAAAAAATAAACGGAGAATTTTTTCCTGCGGGAAACCCGATCCCCACAGGGAATCACTGCCCCGTTCCCCGTGGGAAATTTGGTGGGGATGGGGAATGGAATAGGGGGCGATGGTGGGGACGGGAAGTGA

mRNA sequence

ATGATTTCCAAGTTTGAAAAGTATTGGAGTGTGATTCATGGTGTGTTGGCAATAGCAACAATATTAGATCCTAGATTCAAGATGAGATTGGTTGAGTTTTATTTTCCTCAAATCTATGGATCTCATTATACTGTAGAAATTGAACTTGTTAGAGAATTGTGTTGTGATTTGATGAAGGTTTATAGTTCAAGATCAAGTATAATAGAAGAACCTCAACGTTCTGCATCTACATCTTATTCGACTTCAAAGCGGGATGGAAGTAGTAGGAAAACTTCTCTTGCTAATAGGAAAGATCGCCACCTTAAGTTTAAAGTGTTTGTTAGTAATATGGAGAATGATGTTGACAATGTCAAATCAGAGCTTGATCGTCCACGTCATTCTCAAATTCATGTAAACTTATTGGAAGCTTTGATGTGTACTCAAGATTGGCTACGGACCAAAGATAAGCATACTTCTATTGATGCTAAAGTGTTAGAAAATGGTCTTCACGGTCAAGACATAGACGATGATGGAATCACTGCCCCGTTCCCCGTGGGAAATTTGGTGGGGATGGGGAATGGAATAGGGGGCGATGGTGGGGACGGGAAGTGA

Coding sequence (CDS)

ATGATTTCCAAGTTTGAAAAGTATTGGAGTGTGATTCATGGTGTGTTGGCAATAGCAACAATATTAGATCCTAGATTCAAGATGAGATTGGTTGAGTTTTATTTTCCTCAAATCTATGGATCTCATTATACTGTAGAAATTGAACTTGTTAGAGAATTGTGTTGTGATTTGATGAAGGTTTATAGTTCAAGATCAAGTATAATAGAAGAACCTCAACGTTCTGCATCTACATCTTATTCGACTTCAAAGCGGGATGGAAGTAGTAGGAAAACTTCTCTTGCTAATAGGAAAGATCGCCACCTTAAGTTTAAAGTGTTTGTTAGTAATATGGAGAATGATGTTGACAATGTCAAATCAGAGCTTGATCGTCCACGTCATTCTCAAATTCATGTAAACTTATTGGAAGCTTTGATGTGTACTCAAGATTGGCTACGGACCAAAGATAAGCATACTTCTATTGATGCTAAAGTGTTAGAAAATGGTCTTCACGGTCAAGACATAGACGATGATGGAATCACTGCCCCGTTCCCCGTGGGAAATTTGGTGGGGATGGGGAATGGAATAGGGGGCGATGGTGGGGACGGGAAGTGA

Protein sequence

MISKFEKYWSVIHGVLAIATILDPRFKMRLVEFYFPQIYGSHYTVEIELVRELCCDLMKVYSSRSSIIEEPQRSASTSYSTSKRDGSSRKTSLANRKDRHLKFKVFVSNMENDVDNVKSELDRPRHSQIHVNLLEALMCTQDWLRTKDKHTSIDAKVLENGLHGQDIDDDGITAPFPVGNLVGMGNGIGGDGGDGK*

Homology

[Close]

BLAST of CSPI03G20160.1 vs. ExPASy Swiss-Prot
Match: Q0JMB2 (Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0518400 PE=2 SV=3)

HSP 1 Score: 58.5 bits (140), Expect = 9.6e-08
Identity = 28/66 (42.42%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 4   KFEKYWSVIHGVLAIATILDPRFKMRLVEFYFPQIYGSHYTVE-IELVRELCCDLMKVYS 63
           KF+KYW   + VLAIA  +DPRFKM++VEF + +IYG     + ++LV +   DL K Y+
Sbjct: 472 KFDKYWKDCNVVLAIAVAMDPRFKMKMVEFAYSKIYGPTDAAKYVKLVDDAILDLYKEYA 531

Query: 64  SRSSII 69
           ++  ++
Sbjct: 532 AQPELL 537

[Close]

BLAST of CSPI03G20160.1 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.3e-07
Identity = 27/61 (44.26%), Postives = 40/61 (65.57%), Query Frame = 0


Query: 1   MISKFEKYWSVIHGVLAIATILDPRFKMRLVEFYFPQIYGSHYTVEIELVRELCCDLMKV 60
           M  +F+KYW   + VLAIA ++DPRFKM+LVEF + +IYG      +++V +   +L K 
Sbjct: 500 MHERFDKYWKDCNLVLAIAVVMDPRFKMKLVEFSYSKIYGVEAAKYVKVVDDAVHELYKE 559

Query: 61  Y 62
           Y
Sbjct: 560 Y 560

[Close]

BLAST of CSPI03G20160.1 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 1.8e-06
Identity = 43/124 (34.68%), Postives = 66/124 (53.23%), Query Frame = 0


Query: 1   MISKFEKYWSVIHGVLAIATILDPRFKMRLVEFYFPQIYGSHYTVEIELVRELCCDLMKV 60
           M  KFEKYW V +  LA+A  LDPR+K  L+EFY  + +G  Y V ++    +   L + 
Sbjct: 562 MSEKFEKYWKVSNIALAVACFLDPRYKKILIEFYMKKFHGDSYKVHVDDFVRVIRKLYQF 621

Query: 61  YSSRSSIIEEPQRSASTSYSTSKRDGSSRKTSLANRKDRHLKFKVFVSNMENDVDNVKS- 120
           YSS S        SA  + +T+  + S   T + N  D   +F+ ++  ++ D D V+S 
Sbjct: 622 YSSCSP-------SAPKTKTTT--NDSMDDTLMENEDD---EFQNYLHELK-DYDQVESN 672

Query: 121 ELDR 124
           ELD+
Sbjct: 682 ELDK 672

[Close]

BLAST of CSPI03G20160.1 vs. ExPASy Swiss-Prot
Match: P03010 (Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.8e-06
Identity = 43/124 (34.68%), Postives = 66/124 (53.23%), Query Frame = 0


Query: 1   MISKFEKYWSVIHGVLAIATILDPRFKMRLVEFYFPQIYGSHYTVEIELVRELCCDLMKV 60
           M  KFEKYW V +  LA+A  LDPR+K  L+EFY  + +G  Y V ++    +   L + 
Sbjct: 531 MSEKFEKYWKVSNIALAVACFLDPRYKKILIEFYMKKFHGDSYKVHVDDFVRVIRKLYQF 590

Query: 61  YSSRSSIIEEPQRSASTSYSTSKRDGSSRKTSLANRKDRHLKFKVFVSNMENDVDNVKS- 120
           YSS S        SA  + +T+  + S   T + N  D   +F+ ++  ++ D D V+S 
Sbjct: 591 YSSCSP-------SAPKTKTTT--NDSMDDTLMENEDD---EFQNYLHELK-DYDQVESN 641

Query: 121 ELDR 124
           ELD+
Sbjct: 651 ELDK 641

[Close]

BLAST of CSPI03G20160.1 vs. ExPASy Swiss-Prot
Match: Q9M2N5 (Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=3702 GN=HAT PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.4e-06
Identity = 42/123 (34.15%), Postives = 59/123 (47.97%), Query Frame = 0


Query: 1   MISKFEKYWSVIHGVLAIATILDPRFKMRLVEFYFPQIYGSHYTVEIELVRELCCDLMKV 60
           M  K +KYW     VLA+A ++DPRFKM+LVEF F +I+G      I+ V +   +L   
Sbjct: 495 MQEKVDKYWRDCSLVLAMAVVMDPRFKMKLVEFSFSKIFGEDAGKNIKTVDDGIHELFTE 554

Query: 61  YSSRSSIIEEPQRSASTSYSTSKRDGSSRKTSLANRKDRHLKFKVFVSNMENDVDNVKSE 120
           Y +    +  PQ + S      K DG S              F  ++  ME    N+KSE
Sbjct: 555 YMA----LPSPQNTTSEG---GKADGLS-------------DFDTYI--METTGQNLKSE 595

Query: 121 LDR 124
           LD+
Sbjct: 615 LDQ 595

[Close]

BLAST of CSPI03G20160.1 vs. ExPASy TrEMBL
Match: A0A5D3DHK7 (Zinc finger BED domain-containing protein DAYSLEEPER-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001630 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 1.4e-46
Identity = 98/122 (80.33%), Postives = 106/122 (86.89%), Query Frame = 0


Query: 1   MISKFEKYWSVIHGVLAIATILDPRFKMRLVEFYFPQIYGSHYTVEIELVRELCCDLMKV 60
           MISKFEKYWSVIH  LAIAT LDP+FKMRL+EFYFPQIY SHY  EI+ VRELCCDLM  
Sbjct: 5   MISKFEKYWSVIHSALAIATALDPKFKMRLIEFYFPQIYESHYVAEIKRVRELCCDLMTF 64

Query: 61  YSSRSSIIEEPQRSASTSYSTSKRDGSSRKTSLANRKDRHLKFKVFVSNMENDVDNVKSE 120
           YSS+S  IEEPQRS ST YSTSKRDGSS KTSL NRKDRHLKF+ FVSN+ENDV+NVKS+
Sbjct: 65  YSSKSRTIEEPQRSTSTPYSTSKRDGSSSKTSLVNRKDRHLKFEKFVSNVENDVNNVKSK 124

Query: 121 LD 123
           LD
Sbjct: 125 LD 126

[Close]

BLAST of CSPI03G20160.1 vs. ExPASy TrEMBL
Match: A0A0A0K403 (DUF4413 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G235230 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 4.2e-38
Identity = 99/174 (56.90%), Postives = 105/174 (60.34%), Query Frame = 0


Query: 4   KFEKYWSVIHGVLAIATILDPRFKMRLVEFYFPQIYGSHYTVEIELVRELCCDLMKVYSS 63
           ++EKYWSVIHGVLAIAT+LDPRFKMRL+EFYF QIYGSHY VEIE VRELCCDLMKVYSS
Sbjct: 6   RYEKYWSVIHGVLAIATVLDPRFKMRLIEFYFRQIYGSHYIVEIERVRELCCDLMKVYSS 65

Query: 64  RSSIIEEPQRSASTSYSTSKRDGSSRKTSLANRKDRHLKFKVFVSNMENDVDNVKSELDR 123
           +SSIIEEP    STSYSTSKRDGSS KTSLAN                            
Sbjct: 66  KSSIIEEP---PSTSYSTSKRDGSSSKTSLAN---------------------------- 120

Query: 124 PRHSQIHVNLLEALMCTQDWLRTKDKHTSIDAKVLENGLHGQDIDDDGITAPFP 178
                                    KHT +DAKVLEN  H QDIDDD    PFP
Sbjct: 126 -------------------------KHTPMDAKVLENVFHDQDIDDD---EPFP 120

[Close]

BLAST of CSPI03G20160.1 vs. ExPASy TrEMBL
Match: A0A5D3BE31 (Zinc finger BED domain-containing protein DAYSLEEPER-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold222G00110 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 5.4e-30
Identity = 96/200 (48.00%), Postives = 106/200 (53.00%), Query Frame = 0


Query: 58  MKVYSSRSSIIEEPQRSASTSYSTSKRDGSSRKTSLANRKDRHLKFKVFVSNMENDVDNV 117
           M  YSS+SS  EEPQRS STSY TSKRDGSS K SL NRKDRHLKF+ FVSN+ENDV+NV
Sbjct: 1   MTFYSSKSSTKEEPQRSTSTSYLTSKRDGSSSKISLPNRKDRHLKFEEFVSNVENDVNNV 60

Query: 118 KSELDR------------------------------------------------------ 177
           KS+LDR                                                      
Sbjct: 61  KSKLDRYLDESLLPRTKDFNILQWWKLNGVKYNVLYEIAKDVLAVPITTVASESAFSIGG 120

Query: 178 ----PRHSQIHVNLLEALMCTQDWLRTKDKHTSIDAKVLENGLHGQDIDDD-GITAPFPV 197
               P  SQIH NLLEALMCTQDWL  +DKHT IDAKVLEN LH +D+DDD       PV
Sbjct: 121 RHVGPHRSQIHENLLEALMCTQDWLWAEDKHTPIDAKVLENVLHDRDLDDDEPDPREIPV 180

[Close]

BLAST of CSPI03G20160.1 vs. ExPASy TrEMBL
Match: A0A5A7TPN2 (Zinc finger BED domain-containing protein DAYSLEEPER-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold588G00380 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 7.1e-30
Identity = 86/172 (50.00%), Postives = 95/172 (55.23%), Query Frame = 0


Query: 58  MKVYSSRSSIIEEPQRSASTSYSTSKRDGSSRKTSLANRKDRHLKFKVFVSNMENDVDNV 117
           M  YSS+SS  EEPQRS STSY T KRDGSS K SL N+KDRHLKF+ FVSN+ENDV+NV
Sbjct: 1   MTFYSSKSSTKEEPQRSTSTSYLTLKRDGSSSKISLPNKKDRHLKFEEFVSNVENDVNNV 60

Query: 118 KSELDR------------------------------------------------------ 172
           KS+LDR                                                      
Sbjct: 61  KSKLDRYLDESLLPRTKDFNILQWWKLNGVKYNVLYEIAKDVLAVPITTVASESAFSIGG 120

[Close]

BLAST of CSPI03G20160.1 vs. ExPASy TrEMBL
Match: A0A5C7IUL5 (BED-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001606 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-17
Identity = 68/196 (34.69%), Postives = 93/196 (47.45%), Query Frame = 0


Query: 1   MISKFEKYWSVIHGVLAIATILDPRFKMRLVEFYFPQIYGSHYTVEIELVRELCCDLMKV 60
           MI  FEKYW VIHGV+A+AT+LDPR+KMRL+EFYFP I+G++Y   +E +R+LC DL+K 
Sbjct: 443 MIENFEKYWDVIHGVMAMATMLDPRYKMRLIEFYFPSIFGANYMTHLESIRKLCLDLVKE 502

Query: 61  Y---------------SSRSSIIEEPQRSASTSYSTSKRD---GSSRKTSLANRKDRHLK 120
           Y               SS +S +E P  S+         D    S   T + +  D +L+
Sbjct: 503 YELKFKSGDENSIHSNSSLASHLEMPDNSSKRDECLLSYDLFVSSDGPTHVKSEFDAYLE 562

Query: 121 FKVFVSNMEND--------------------------VDNVKSE--------LDRPRHSQ 145
             V     + D                          V +V SE        +  P  S+
Sbjct: 563 ENVLPRTKDFDILVWWRANATKYPILAQIARDFLTIPVSSVASESAFSTCGRIVSPHRSR 622

[Close]

BLAST of CSPI03G20160.1 vs. NCBI nr
Match: TYK23151.1 (zinc finger BED domain-containing protein DAYSLEEPER-like [Cucumis melo var. makuwa])

HSP 1 Score: 196.1 bits (497), Expect = 2.9e-46
Identity = 98/122 (80.33%), Postives = 106/122 (86.89%), Query Frame = 0


Query: 1   MISKFEKYWSVIHGVLAIATILDPRFKMRLVEFYFPQIYGSHYTVEIELVRELCCDLMKV 60
           MISKFEKYWSVIH  LAIAT LDP+FKMRL+EFYFPQIY SHY  EI+ VRELCCDLM  
Sbjct: 5   MISKFEKYWSVIHSALAIATALDPKFKMRLIEFYFPQIYESHYVAEIKRVRELCCDLMTF 64

Query: 61  YSSRSSIIEEPQRSASTSYSTSKRDGSSRKTSLANRKDRHLKFKVFVSNMENDVDNVKSE 120
           YSS+S  IEEPQRS ST YSTSKRDGSS KTSL NRKDRHLKF+ FVSN+ENDV+NVKS+
Sbjct: 65  YSSKSRTIEEPQRSTSTPYSTSKRDGSSSKTSLVNRKDRHLKFEKFVSNVENDVNNVKSK 124

Query: 121 LD 123
           LD
Sbjct: 125 LD 126

[Close]

BLAST of CSPI03G20160.1 vs. NCBI nr
Match: KGN44253.1 (hypothetical protein Csa_016011 [Cucumis sativus])

HSP 1 Score: 167.9 bits (424), Expect = 8.6e-38
Identity = 99/174 (56.90%), Postives = 105/174 (60.34%), Query Frame = 0


Query: 4   KFEKYWSVIHGVLAIATILDPRFKMRLVEFYFPQIYGSHYTVEIELVRELCCDLMKVYSS 63
           ++EKYWSVIHGVLAIAT+LDPRFKMRL+EFYF QIYGSHY VEIE VRELCCDLMKVYSS
Sbjct: 6   RYEKYWSVIHGVLAIATVLDPRFKMRLIEFYFRQIYGSHYIVEIERVRELCCDLMKVYSS 65

Query: 64  RSSIIEEPQRSASTSYSTSKRDGSSRKTSLANRKDRHLKFKVFVSNMENDVDNVKSELDR 123
           +SSIIEEP    STSYSTSKRDGSS KTSLAN                            
Sbjct: 66  KSSIIEEP---PSTSYSTSKRDGSSSKTSLAN---------------------------- 120

Query: 124 PRHSQIHVNLLEALMCTQDWLRTKDKHTSIDAKVLENGLHGQDIDDDGITAPFP 178
                                    KHT +DAKVLEN  H QDIDDD    PFP
Sbjct: 126 -------------------------KHTPMDAKVLENVFHDQDIDDD---EPFP 120

[Close]

BLAST of CSPI03G20160.1 vs. NCBI nr
Match: TYJ98100.1 (zinc finger BED domain-containing protein DAYSLEEPER-like [Cucumis melo var. makuwa])

HSP 1 Score: 141.0 bits (354), Expect = 1.1e-29
Identity = 96/200 (48.00%), Postives = 106/200 (53.00%), Query Frame = 0


Query: 58  MKVYSSRSSIIEEPQRSASTSYSTSKRDGSSRKTSLANRKDRHLKFKVFVSNMENDVDNV 117
           M  YSS+SS  EEPQRS STSY TSKRDGSS K SL NRKDRHLKF+ FVSN+ENDV+NV
Sbjct: 1   MTFYSSKSSTKEEPQRSTSTSYLTSKRDGSSSKISLPNRKDRHLKFEEFVSNVENDVNNV 60

Query: 118 KSELDR------------------------------------------------------ 177
           KS+LDR                                                      
Sbjct: 61  KSKLDRYLDESLLPRTKDFNILQWWKLNGVKYNVLYEIAKDVLAVPITTVASESAFSIGG 120

Query: 178 ----PRHSQIHVNLLEALMCTQDWLRTKDKHTSIDAKVLENGLHGQDIDDD-GITAPFPV 197
               P  SQIH NLLEALMCTQDWL  +DKHT IDAKVLEN LH +D+DDD       PV
Sbjct: 121 RHVGPHRSQIHENLLEALMCTQDWLWAEDKHTPIDAKVLENVLHDRDLDDDEPDPREIPV 180

[Close]

BLAST of CSPI03G20160.1 vs. NCBI nr
Match: KAA0043375.1 (zinc finger BED domain-containing protein DAYSLEEPER-like [Cucumis melo var. makuwa])

HSP 1 Score: 140.6 bits (353), Expect = 1.5e-29
Identity = 86/172 (50.00%), Postives = 95/172 (55.23%), Query Frame = 0


Query: 58  MKVYSSRSSIIEEPQRSASTSYSTSKRDGSSRKTSLANRKDRHLKFKVFVSNMENDVDNV 117
           M  YSS+SS  EEPQRS STSY T KRDGSS K SL N+KDRHLKF+ FVSN+ENDV+NV
Sbjct: 1   MTFYSSKSSTKEEPQRSTSTSYLTLKRDGSSSKISLPNKKDRHLKFEEFVSNVENDVNNV 60

Query: 118 KSELDR------------------------------------------------------ 172
           KS+LDR                                                      
Sbjct: 61  KSKLDRYLDESLLPRTKDFNILQWWKLNGVKYNVLYEIAKDVLAVPITTVASESAFSIGG 120

[Close]

BLAST of CSPI03G20160.1 vs. NCBI nr
Match: XP_038884881.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida])

HSP 1 Score: 127.1 bits (318), Expect = 1.7e-25
Identity = 58/71 (81.69%), Postives = 65/71 (91.55%), Query Frame = 0


Query: 1   MISKFEKYWSVIHGVLAIATILDPRFKMRLVEFYFPQIYGSHYTVEIELVRELCCDLMKV 60
           MI+KFEKYWSVIHGVLAIAT+LDPRFKMRL++FYFPQIYG H+TVEI+ VR+LCCDLMK 
Sbjct: 200 MIAKFEKYWSVIHGVLAIATVLDPRFKMRLIQFYFPQIYGFHHTVEIKRVRDLCCDLMKF 259

Query: 61  YSSRSSIIEEP 72
           YSS S  IEEP
Sbjct: 260 YSSNSRTIEEP 270

[Close]

BLAST of CSPI03G20160.1 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 53.9 bits (128), Expect = 1.7e-07
Identity = 42/123 (34.15%), Postives = 59/123 (47.97%), Query Frame = 0


Query: 1   MISKFEKYWSVIHGVLAIATILDPRFKMRLVEFYFPQIYGSHYTVEIELVRELCCDLMKV 60
           M  K +KYW     VLA+A ++DPRFKM+LVEF F +I+G      I+ V +   +L   
Sbjct: 495 MQEKVDKYWRDCSLVLAMAVVMDPRFKMKLVEFSFSKIFGEDAGKNIKTVDDGIHELFTE 554

Query: 61  YSSRSSIIEEPQRSASTSYSTSKRDGSSRKTSLANRKDRHLKFKVFVSNMENDVDNVKSE 120
           Y +    +  PQ + S      K DG S              F  ++  ME    N+KSE
Sbjct: 555 YMA----LPSPQNTTSEG---GKADGLS-------------DFDTYI--METTGQNLKSE 595

Query: 121 LDR 124
           LD+
Sbjct: 615 LDQ 595

The following BLAST results are available for this feature:

BLAST of CSPI03G20160.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0JMB2	9.6e-08	42.42	Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. j...	[more]
Q6AVI0	1.3e-07	44.26	Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j...	[more]
P08770	1.8e-06	34.68	Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2	[more]
P03010	1.8e-06	34.68	Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1	[more]
Q9M2N5	2.4e-06	34.15	Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=...	[more]

BLAST of CSPI03G20160.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DHK7	1.4e-46	80.33	Zinc finger BED domain-containing protein DAYSLEEPER-like OS=Cucumis melo var. m...	[more]
A0A0A0K403	4.2e-38	56.90	DUF4413 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G235230 PE=...	[more]
A0A5D3BE31	5.4e-30	48.00	Zinc finger BED domain-containing protein DAYSLEEPER-like OS=Cucumis melo var. m...	[more]
A0A5A7TPN2	7.1e-30	50.00	Zinc finger BED domain-containing protein DAYSLEEPER-like OS=Cucumis melo var. m...	[more]
A0A5C7IUL5	1.1e-17	34.69	BED-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001606...	[more]

BLAST of CSPI03G20160.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK23151.1	2.9e-46	80.33	zinc finger BED domain-containing protein DAYSLEEPER-like [Cucumis melo var. mak...	[more]
KGN44253.1	8.6e-38	56.90	hypothetical protein Csa_016011 [Cucumis sativus]	[more]
TYJ98100.1	1.1e-29	48.00	zinc finger BED domain-containing protein DAYSLEEPER-like [Cucumis melo var. mak...	[more]
KAA0043375.1	1.5e-29	50.00	zinc finger BED domain-containing protein DAYSLEEPER-like [Cucumis melo var. mak...	[more]
XP_038884881.1	1.7e-25	81.69	zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida]	[more]

BLAST of CSPI03G20160.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42170.1	1.7e-07	34.15	BED zinc finger ;hAT family dimerisation domain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025525	hAT-like transposase, RNase-H fold	PFAM	PF14372	DUF4413	coord: 1..61 e-value: 8.7E-15 score: 54.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..94
None	No IPR available	PANTHER	PTHR23272:SF148	ZINC FINGER BED DOMAIN-CONTAINING PROTEIN RICESLEEPER 1-LIKE	coord: 1..124
None	No IPR available	PANTHER	PTHR23272	BED FINGER-RELATED	coord: 1..124
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 2..146

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI03G20160	CSPI03G20160	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI03G20160.1.cds1	CSPI03G20160.1.cds1	CDS
CSPI03G20160.1.cds2	CSPI03G20160.1.cds2	CDS
CSPI03G20160.1.cds3	CSPI03G20160.1.cds3	CDS
CSPI03G20160.1.cds4	CSPI03G20160.1.cds4	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI03G20160.1	CSPI03G20160.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034641	cellular nitrogen compound metabolic process
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:1901564	organonitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity