CSPI02G21570.1 (mRNA) Cucumber (PI 183967) v1

Overview
NameCSPI02G21570.1
TypemRNA
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptiondouble-stranded RNA-binding protein 1-like
LocationChr2: 18907000 .. 18910245 (+)
Sequence length1696
RNA-Seq ExpressionCSPI02G21570.1
SyntenyCSPI02G21570.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTATTTTAGTGAGGGGCAAAATATAGACATTTTATGTGAACATTAGTGTCCAAAACTCTTTTATCCCATTGAACCCGTCTTATTTTTGGCAATTAGCCCTAGGGCACCATCACCTAGGCTTCGAACTTTGCAGTTCATTTTTTTCGCGTCTACGAACGAAGTGGTTAGCCCAGCTGCACTGCTTCCTCTCTGCTCTTCGCCTTTACCAATACTCAAATCTCCTGCTGAGAGAGGATTCTCACCTTTTTCTTACTCCTCAAAGCCATGCCAGCCAAGGACAACTTTCAAGGTATTCCATTTTCCCTTTTCACTTTCCAACCTCTACTTTTCAAACTCGTTTCTGAATTGCAGTATTGATGTTCTTTCAGTTGGATTTCCCTAGAAACTCGGCAGTTTTTTTAGATTATTTTTAGAGAATTTTGATAATTTTTCATGGGGGTAATTGATCCTCGGTAAGAGAGTATACTGGGCCACAACAATGGCGGGGGGGGAGGGGGGGCGGTGGTGGTGATAGTGATGGGGTGATGGTGGCACTGACGGTGGTTGAGGGGGGGGGGGGGGGGGTGGCGGAGATGGTATGAGAAGTGAAGATCTTAATACAATTGTACTACTGTTTTATTTTTAAAGAATGTGTTCAAAGTTAATTGACTCATTTGTTTGATGTTTTTGATGTTGTCGTGCCACATTTTTTTTATTGGCTTGTTTCTTTTCATCCGTACTGTAACCTAGTTATGAATATAGATTTCGGGTGAATGATGGGTTATTATTATCATTACTACTTTTATTTTGAGCTCTGATAAATTTGTTGTTAGTGCTTATTTTTTCTCATTCTTTGATGAATATCAGGTGTTTCAAATTGCTATGTTTTCAAAAGTCGACTGCAGGAATATGCACAAAAAGTGGGACTTCCCACACCTGTATACGAGACTATCAAAGAAGGTCCTTCCCATGAGCCAACTTTTCATTCTACGGTGATTGTTAATGATGTTAGATATGATTCTCTACCGGGATTTTCTAATCGCAAGGCAGCAGAGCAGTCAGCTGCTGAAGTAGCTCTTATGGAACTGTCTAAATCCAGTGATCTTAATCCACATGTCTCTCAACCCGTGGTAAGATTTCATATTCTTCACCCCACATAACTTTTTGTTGTTGCTGTTGTTGCTACTGCTGTTTTGTTTTTCTGAACGATCCTATGCAAAGCCCTCTTAATATCTAAATTTCAGAGCCCATTGTTTGGACTCATGACTATTTGTTGGATGGTTGTTTTATATTAAGTTTAACTGTCATAACTTGAGGGACAGTTTGGTATTTGACTTTGCATTTATTAAAAGCATTTTAGTATGCAACATATTCAAAATAACAGCGACTATGTGTGATTCAACCTAGATAGCTTTTTAGAACTTGAAGACACATTTGTACTGTAGAAGAGATCATGTTCAAGTATTAAACTTTTATTTCTTCCAAGTTATGGAGAGGGCCTTGGTTGAACTTCTCACAAGAACTCTCTGCATCTGCTCGTCTTACCTAGACTCAATATCCATATCAAGCTTCTTGTTTATTTGTCCCCATTTAATTCTAATTTAGGGTGCAACATGGTTAATCTTTTGATAGCGTTCTTTTGGCTTAAAATTAGCCAACCCCTGTAGTCTACTGATCTTTAACTTTTTTTTGTATCTACTTTTAATTCTTTGAATCCTTTATTAGAGAGGATTTCAAGATCTATTGTGCAAATAGTTTAATATGTCTTCTCTGCTGGATTATATATATAATGAAAATTTGGCTGGTCTTTGGCTGTGTTCTCTTACTATCAGGTTACAGCAGAATTGTATCCTTTTCTTTGGAGTCTCATTTGGCTGAAGTACTCTATTTGATATCGATGAAAATATCCCTATTAATTTACTATTGAATAAATAATAAAGCTTCAACATTTTTTTATACTTCCCATACTCCCCCCAAATAAGGAATTAAGCCTCAATAGTCTCTATTTCCTCTTTTGCTATTGGGCCTTTACTAAACAGATTTCAACAGTCTATAGCTGTAATAGTAGAATTTCTGCTTTTATTTTATTTTATTTCTTCTTTGTCAACTTTGCCTTTTTCCAGCACGAAACAGGACTGTGCAAAAATCTGCTTCAGGAGTATGCACAGAAGATGAACTTTGCAATCCCACTTTATCAATGCCAAAAAGATGATGGTCCAGGCAGAGGATCCCTTTTCTCATGTACAGTAGAAATTGGAGGGATCCGCTATATTGGTGCTGTAGCAAAAACAAAGAAAGAAGCAGAAATTAAAGCTGCAAGAACTGCTTTGTTAGCAATCCAATCTTGCCCGAATTCATTGTCTGAAAAATCTGTCAATCAAGTTCAGCTCACTGTGATCCCATCATGCAAGCGAAAAGAAGCAGCAGATTGCTCAGTTAAACCAAAGTCCACTGCATCGCCCAGAGCAAAGAAAGGTCGATTTAAGAGATTTAAGAGAGGAGTGTTAAGGAATAGAGACTTCATAAATGGATTAGTCAATTTGGACTTTGACAACACTGATAGATCAACCTTGGAACCTTTTACAACTGGGGTTGTCCAGTTGCCAGGGTATGTGGGACCAGTTGATTTAGCGAAAGATACTTTGCTGAATTCCGAGTGTAGAACGACTGATCTAAGCTCAAATAACAACGACGTTTTGGTCTCCAACGTCCAAAGCGACATGCCTCTGCTCCTAAATGGTAATTCCGGAAATGGTTGTTCGGGTACTTTCAATTCCAATCAAGTAAACTGTGCAACTTCTAATGTTATGAGTTCTCCTCTGACTGACGTTCAACCAACTTGTAGTGAAGTAGCGAATGTGGCTGCTGGAGTAACAGGAGAGCTTCAGTGATTGACAGTGCTATTAAGAGCTAGTTTTGTGTTTGAAGCCACTCCTACTTACAAAATCTGAACGGTGCGACGAGAGGGTTGTGCTTAGCTTGGTTTTGCAGTTTACTACAAGATTCTTGAATAGCCTTACTATTAAAAAGCTTAAGAGGTTGAGTTTATTGGACTGAAGATCTGAGATCAGGCATTTAAGTGGCAACTATCCGAGAGCAGTTGCTATGATCAGAGCGGTGAGATTTAGCTTTTAGTAGAAATCGTGCTTTGATATTGTCATGGCTGTAGTTTCATTATATCTGTCCTTATAATCTATACATTAACTTCATGACCAGCGTTAATATTATCTAAATCATATACGTCTCCAAACCTATTTTTCCTTCCA

mRNA sequence

GTTATTTTAGTGAGGGGCAAAATATAGACATTTTATGTGAACATTAGTGTCCAAAACTCTTTTATCCCATTGAACCCGTCTTATTTTTGGCAATTAGCCCTAGGGCACCATCACCTAGGCTTCGAACTTTGCAGTTCATTTTTTTCGCGTCTACGAACGAAGTGGTTAGCCCAGCTGCACTGCTTCCTCTCTGCTCTTCGCCTTTACCAATACTCAAATCTCCTGCTGAGAGAGGATTCTCACCTTTTTCTTACTCCTCAAAGCCATGCCAGCCAAGGACAACTTTCAAGGTGTTTCAAATTGCTATGTTTTCAAAAGTCGACTGCAGGAATATGCACAAAAAGTGGGACTTCCCACACCTGTATACGAGACTATCAAAGAAGGTCCTTCCCATGAGCCAACTTTTCATTCTACGGTGATTGTTAATGATGTTAGATATGATTCTCTACCGGGATTTTCTAATCGCAAGGCAGCAGAGCAGTCAGCTGCTGAAGTAGCTCTTATGGAACTGTCTAAATCCAGTGATCTTAATCCACATGTCTCTCAACCCGTGCACGAAACAGGACTGTGCAAAAATCTGCTTCAGGAGTATGCACAGAAGATGAACTTTGCAATCCCACTTTATCAATGCCAAAAAGATGATGGTCCAGGCAGAGGATCCCTTTTCTCATGTACAGTAGAAATTGGAGGGATCCGCTATATTGGTGCTGTAGCAAAAACAAAGAAAGAAGCAGAAATTAAAGCTGCAAGAACTGCTTTGTTAGCAATCCAATCTTGCCCGAATTCATTGTCTGAAAAATCTGTCAATCAAGTTCAGCTCACTGTGATCCCATCATGCAAGCGAAAAGAAGCAGCAGATTGCTCAGTTAAACCAAAGTCCACTGCATCGCCCAGAGCAAAGAAAGGTCGATTTAAGAGATTTAAGAGAGGAGTGTTAAGGAATAGAGACTTCATAAATGGATTAGTCAATTTGGACTTTGACAACACTGATAGATCAACCTTGGAACCTTTTACAACTGGGGTTGTCCAGTTGCCAGGGTATGTGGGACCAGTTGATTTAGCGAAAGATACTTTGCTGAATTCCGAGTGTAGAACGACTGATCTAAGCTCAAATAACAACGACGTTTTGGTCTCCAACGTCCAAAGCGACATGCCTCTGCTCCTAAATGGTAATTCCGGAAATGGTTGTTCGGGTACTTTCAATTCCAATCAAGTAAACTGTGCAACTTCTAATGTTATGAGTTCTCCTCTGACTGACGTTCAACCAACTTGTAGTGAAGTAGCGAATGTGGCTGCTGGAGTAACAGGAGAGCTTCAGTGATTGACAGTGCTATTAAGAGCTAGTTTTGTGTTTGAAGCCACTCCTACTTACAAAATCTGAACGGTGCGACGAGAGGGTTGTGCTTAGCTTGGTTTTGCAGTTTACTACAAGATTCTTGAATAGCCTTACTATTAAAAAGCTTAAGAGGTTGAGTTTATTGGACTGAAGATCTGAGATCAGGCATTTAAGTGGCAACTATCCGAGAGCAGTTGCTATGATCAGAGCGGTGAGATTTAGCTTTTAGTAGAAATCGTGCTTTGATATTGTCATGGCTGTAGTTTCATTATATCTGTCCTTATAATCTATACATTAACTTCATGACCAGCGTTAATATTATCTAAATCATATACGTCTCCAAACCTATTTTTCCTTCCA

Coding sequence (CDS)

ATGCCAGCCAAGGACAACTTTCAAGGTGTTTCAAATTGCTATGTTTTCAAAAGTCGACTGCAGGAATATGCACAAAAAGTGGGACTTCCCACACCTGTATACGAGACTATCAAAGAAGGTCCTTCCCATGAGCCAACTTTTCATTCTACGGTGATTGTTAATGATGTTAGATATGATTCTCTACCGGGATTTTCTAATCGCAAGGCAGCAGAGCAGTCAGCTGCTGAAGTAGCTCTTATGGAACTGTCTAAATCCAGTGATCTTAATCCACATGTCTCTCAACCCGTGCACGAAACAGGACTGTGCAAAAATCTGCTTCAGGAGTATGCACAGAAGATGAACTTTGCAATCCCACTTTATCAATGCCAAAAAGATGATGGTCCAGGCAGAGGATCCCTTTTCTCATGTACAGTAGAAATTGGAGGGATCCGCTATATTGGTGCTGTAGCAAAAACAAAGAAAGAAGCAGAAATTAAAGCTGCAAGAACTGCTTTGTTAGCAATCCAATCTTGCCCGAATTCATTGTCTGAAAAATCTGTCAATCAAGTTCAGCTCACTGTGATCCCATCATGCAAGCGAAAAGAAGCAGCAGATTGCTCAGTTAAACCAAAGTCCACTGCATCGCCCAGAGCAAAGAAAGGTCGATTTAAGAGATTTAAGAGAGGAGTGTTAAGGAATAGAGACTTCATAAATGGATTAGTCAATTTGGACTTTGACAACACTGATAGATCAACCTTGGAACCTTTTACAACTGGGGTTGTCCAGTTGCCAGGGTATGTGGGACCAGTTGATTTAGCGAAAGATACTTTGCTGAATTCCGAGTGTAGAACGACTGATCTAAGCTCAAATAACAACGACGTTTTGGTCTCCAACGTCCAAAGCGACATGCCTCTGCTCCTAAATGGTAATTCCGGAAATGGTTGTTCGGGTACTTTCAATTCCAATCAAGTAAACTGTGCAACTTCTAATGTTATGAGTTCTCCTCTGACTGACGTTCAACCAACTTGTAGTGAAGTAGCGAATGTGGCTGCTGGAGTAACAGGAGAGCTTCAGTGA

Protein sequence

MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSEKSVNQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKRFKRGVLRNRDFINGLVNLDFDNTDRSTLEPFTTGVVQLPGYVGPVDLAKDTLLNSECRTTDLSSNNNDVLVSNVQSDMPLLLNGNSGNGCSGTFNSNQVNCATSNVMSSPLTDVQPTCSEVANVAAGVTGELQ*
Homology
[Close]
BLAST of CSPI02G21570.1 vs. ExPASy Swiss-Prot
Match: O04492 (Double-stranded RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=DRB1 PE=1 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.7e-68
Identity = 146/235 (62.13%), Postives = 177/235 (75.32%), Query Frame = 0 

Query: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60
           M + D   GVSNCYVFKSRLQEYAQK  LPTPVYE +KEGPSH+  F STVI++ VRY+S
Sbjct: 1   MTSTDVSSGVSNCYVFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNS 60

Query: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY 120
           LPGF NRKAAEQSAAEVAL EL+KSS+L+  VSQPVHETGLCKNLLQEYAQKMN+AIPLY
Sbjct: 61  LPGFFNRKAAEQSAAEVALRELAKSSELSQCVSQPVHETGLCKNLLQEYAQKMNYAIPLY 120

Query: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQS-CPNSLSEKS 180
           QCQK +  GR + F+CTVEIGGI+Y GA  +TKK+AEI A RTALLAIQS   N+L+  +
Sbjct: 121 QCQKVETLGRVTQFTCTVEIGGIKYTGAATRTKKDAEISAGRTALLAIQSDTKNNLANYN 180

Query: 181 VNQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFK----RFKRGVLRNRDFI 231
               QLTV+P C++K         ++  + +A+K +FK    + KR V +N + I
Sbjct: 181 ---TQLTVLP-CEKKTIQAAIPLKETVKTLKARKAQFKKKAQKGKRTVAKNPEDI 231

[Close]
BLAST of CSPI02G21570.1 vs. ExPASy Swiss-Prot
Match: Q0DJA3 (Double-stranded RNA-binding protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB3 PE=2 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.3e-58
Identity = 133/212 (62.74%), Postives = 152/212 (71.70%), Query Frame = 0 

Query: 10  VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDSLPGFSNRKA 69
           V NCYVFKSRLQEYAQK GL TP Y T KEGPSHEP F STV++N+  Y SLPGFSNRKA
Sbjct: 30  VENCYVFKSRLQEYAQKAGLQTPEYHTSKEGPSHEPVFKSTVVINNTSYGSLPGFSNRKA 89

Query: 70  AEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPG 129
           AEQSAAEVALME+ KS   N ++   V ETGLCKNLLQEYAQKMN+AIP Y C K   P 
Sbjct: 90  AEQSAAEVALMEIVKSIPANANI-PAVQETGLCKNLLQEYAQKMNYAIPSYICTK---PA 149

Query: 130 RG-SLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSEKSVN-QVQLTV 189
            G + F CTVEIGGI+YIGA A+TKK+AEIKAARTALLAIQ      SE S N   +  V
Sbjct: 150 SGLAPFLCTVEIGGIQYIGAAARTKKDAEIKAARTALLAIQ----GQSEGSANGATKYIV 209

Query: 190 IPSCKRKEAADCSVKPKSTASP-RAKKGRFKR 219
           +P   ++   +   +P  T  P +AKKG FK+
Sbjct: 210 VPG--KRVGKEVEKRPIETPKPLKAKKGGFKK 231

[Close]
BLAST of CSPI02G21570.1 vs. ExPASy Swiss-Prot
Match: Q0IQN6 (Double-stranded RNA-binding protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB8 PE=2 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.1e-57
Identity = 130/211 (61.61%), Postives = 149/211 (70.62%), Query Frame = 0 

Query: 10  VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDSLPGFSNRKA 69
           V NCYVFKSRLQEYAQK GL TP Y T KEGPSHEP F STV++N+  YDSLPGF NRKA
Sbjct: 28  VENCYVFKSRLQEYAQKTGLQTPEYHTFKEGPSHEPVFKSTVVINNTSYDSLPGFFNRKA 87

Query: 70  AEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPG 129
           AEQSAAEVALME+ KS   N ++   V ETGLCKNLLQEYAQKMN+AIP Y C K     
Sbjct: 88  AEQSAAEVALMEIVKSIPANANI-PAVQETGLCKNLLQEYAQKMNYAIPSYICTK--SAS 147

Query: 130 RGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSEKSVN-QVQLTVI 189
             + F CTVEIGGI+YIGA A+TKK+AEIKAARTALLAIQ      SE S N   +  V+
Sbjct: 148 GLAPFICTVEIGGIQYIGAAARTKKDAEIKAARTALLAIQ----GQSEGSANGATKYIVV 207

Query: 190 PSCKRKEAADCSVKPKSTASP-RAKKGRFKR 219
           P   ++   +   +P  T  P + KKG FK+
Sbjct: 208 PG--KRVGKEVEKRPIETPKPLKVKKGGFKK 229

[Close]
BLAST of CSPI02G21570.1 vs. ExPASy Swiss-Prot
Match: Q0IV63 (Double-stranded RNA-binding protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB7 PE=2 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.1e-57
Identity = 130/211 (61.61%), Postives = 148/211 (70.14%), Query Frame = 0 

Query: 10  VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDSLPGFSNRKA 69
           V NCYVFKSRLQEYAQK GL TP Y T KEGPSHEP F STV++N+  YDSLPGF NRKA
Sbjct: 28  VENCYVFKSRLQEYAQKAGLQTPEYHTFKEGPSHEPVFKSTVVINNTSYDSLPGFFNRKA 87

Query: 70  AEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPG 129
           AEQSAAEVALME+ KS   N ++   V ETGLCKNLLQEYAQKMN+AIP Y C K     
Sbjct: 88  AEQSAAEVALMEIVKSIPANANI-PAVQETGLCKNLLQEYAQKMNYAIPSYICTK--SAS 147

Query: 130 RGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSEKSVN-QVQLTVI 189
             + F CTVEIGGI+YIGA A+TKK+AEIKAARTALLAIQ      SE S N   +  V+
Sbjct: 148 GLAPFICTVEIGGIQYIGAAARTKKDAEIKAARTALLAIQ----GQSEGSANGATKYIVV 207

Query: 190 PSCKRKEAADCSVKPKSTASP-RAKKGRFKR 219
           P   ++   +    P  T  P + KKG FK+
Sbjct: 208 PG--KRVGKEVEKMPIETPKPLKIKKGGFKK 229

[Close]
BLAST of CSPI02G21570.1 vs. ExPASy Swiss-Prot
Match: Q0DKP4 (Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB2 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.9e-24
Identity = 63/158 (39.87%), Postives = 92/158 (58.23%), Query Frame = 0 

Query: 15  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDSLPGFSNRKAAEQSA 74
           ++K++LQE AQ+     P Y  I+EGP H P F +TV  N   ++S    S  + AE +A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPAFCSTLRLAEHAA 60

Query: 75  AEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLF 134
           AEVAL ELSK    +   ++ + ETG+ KNLLQE A +    +P+Y   +  GPG   +F
Sbjct: 61  AEVALNELSKRGPSSSLAAKVLDETGIYKNLLQETAHRAGLKLPVYTTIR-SGPGHTPVF 120

Query: 135 SCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP 173
           +CTVE+ G+ + G   KTKK+A+  AA  A   ++  P
Sbjct: 121 TCTVELAGMTFTGNPGKTKKQAQKNAAMAAWSELKQLP 157

[Close]
BLAST of CSPI02G21570.1 vs. ExPASy TrEMBL
Match: A0A0A0LRU8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370450 PE=4 SV=1)

HSP 1 Score: 694.5 bits (1791), Expect = 2.3e-196
Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0 

Query: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60
           MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS
Sbjct: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60

Query: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY 120
           LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY
Sbjct: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY 120

Query: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSEKSV 180
           QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSEKSV
Sbjct: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSEKSV 180

Query: 181 NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKRFKRGVLRNRDFINGLVNLDFDN 240
           NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKRFKRGVLRNRDFINGLVNLDFDN
Sbjct: 181 NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKRFKRGVLRNRDFINGLVNLDFDN 240

Query: 241 TDRSTLEPFTTGVVQLPGYVGPVDLAKDTLLNSECRTTDLSSNNNDVLVSNVQSDMPLLL 300
           TDRSTLEPFTTGVVQLPGYVGPVDLAKDTLLNSECRTTDLSSNNNDVLVSNVQSDMPLLL
Sbjct: 241 TDRSTLEPFTTGVVQLPGYVGPVDLAKDTLLNSECRTTDLSSNNNDVLVSNVQSDMPLLL 300

Query: 301 NGNSGNGCSGTFNSNQVNCATSNVMSSPLTDVQPTCSEVANVAAGVTGELQ 352
           NGNSGNGCSGTFNSNQVNCATSNVMSSPLTDVQPTCSEVANVAAGVTGELQ
Sbjct: 301 NGNSGNGCSGTFNSNQVNCATSNVMSSPLTDVQPTCSEVANVAAGVTGELQ 351

[Close]
BLAST of CSPI02G21570.1 vs. ExPASy TrEMBL
Match: A0A5A7VI00 (Double-stranded RNA-binding protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004330 PE=4 SV=1)

HSP 1 Score: 627.1 bits (1616), Expect = 4.5e-176
Identity = 323/351 (92.02%), Postives = 327/351 (93.16%), Query Frame = 0 

Query: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60
           MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS
Sbjct: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60

Query: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY 120
           LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY
Sbjct: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY 120

Query: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSEKSV 180
           QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLS KSV
Sbjct: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSV 180

Query: 181 NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKRFKRGVLRNRDFINGLVNLDFDN 240
           NQVQLTVIPSCKRKEAADCSV PKSTA+PRAKKG   RFKRGVLR R F NGLVNLDF+N
Sbjct: 181 NQVQLTVIPSCKRKEAADCSVTPKSTAAPRAKKG---RFKRGVLRKRGFRNGLVNLDFNN 240

Query: 241 TDRSTLEPFTTGVVQLPGYVGPVDLAKDTLLNSECRTTDLSSNNNDVLVSNVQSDMPLLL 300
            DRS LEPFTT  VQLPGY GPVDLAKDTL NSE RTTDLSS+NND LVSNVQSDMP  +
Sbjct: 241 IDRSALEPFTTEAVQLPGYAGPVDLAKDTLPNSESRTTDLSSSNNDFLVSNVQSDMPPHV 300

Query: 301 NGNSGNGCSGTFNSNQVNCATSNVMSSPLTDVQPTCSEVANVAAGVTGELQ 352
           N N GN CSGT NSNQVNCATSNVMS PLTDVQPTCSEV NVAAGVTGELQ
Sbjct: 301 NSNFGNACSGTLNSNQVNCATSNVMSFPLTDVQPTCSEVGNVAAGVTGELQ 348

[Close]
BLAST of CSPI02G21570.1 vs. ExPASy TrEMBL
Match: A0A1S3BBH0 (double-stranded RNA-binding protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488118 PE=4 SV=1)

HSP 1 Score: 619.0 bits (1595), Expect = 1.2e-173
Identity = 320/351 (91.17%), Postives = 327/351 (93.16%), Query Frame = 0 

Query: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60
           MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRY+S
Sbjct: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNS 60

Query: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY 120
           LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY
Sbjct: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY 120

Query: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSEKSV 180
           QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLS KS+
Sbjct: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSI 180

Query: 181 NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKRFKRGVLRNRDFINGLVNLDFDN 240
           N +QLTVIPSCKRKEAADCSV PKSTA+PRAKKG   RFKRGV R R F NGLVNLDF+N
Sbjct: 181 N-LQLTVIPSCKRKEAADCSVTPKSTAAPRAKKG---RFKRGVSRKRGFRNGLVNLDFNN 240

Query: 241 TDRSTLEPFTTGVVQLPGYVGPVDLAKDTLLNSECRTTDLSSNNNDVLVSNVQSDMPLLL 300
            DRS LEPFTT  VQLPGY GPVDLAKDTL NSE RTTDLSS+NNDVLVSNVQSDMP  +
Sbjct: 241 IDRSALEPFTTEAVQLPGYAGPVDLAKDTLPNSESRTTDLSSSNNDVLVSNVQSDMPPHV 300

Query: 301 NGNSGNGCSGTFNSNQVNCATSNVMSSPLTDVQPTCSEVANVAAGVTGELQ 352
           N N GNGCSGT NSNQVNCATSNVMS PLTDVQPTCSEV NVAAGVTGELQ
Sbjct: 301 NSNFGNGCSGTLNSNQVNCATSNVMSFPLTDVQPTCSEVGNVAAGVTGELQ 347

[Close]
BLAST of CSPI02G21570.1 vs. ExPASy TrEMBL
Match: A0A1S3BBH3 (double-stranded RNA-binding protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488118 PE=4 SV=1)

HSP 1 Score: 599.7 bits (1545), Expect = 7.6e-168
Identity = 311/344 (90.41%), Postives = 319/344 (92.73%), Query Frame = 0 

Query: 8   QGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDSLPGFSNR 67
           + VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRY+SLPGFSNR
Sbjct: 2   RSVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNR 61

Query: 68  KAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDG 127
           KAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDG
Sbjct: 62  KAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDG 121

Query: 128 PGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSEKSVNQVQLTV 187
           PGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLS KS+N +QLTV
Sbjct: 122 PGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSIN-LQLTV 181

Query: 188 IPSCKRKEAADCSVKPKSTASPRAKKGRFKRFKRGVLRNRDFINGLVNLDFDNTDRSTLE 247
           IPSCKRKEAADCSV PKSTA+PRAKKG   RFKRGV R R F NGLVNLDF+N DRS LE
Sbjct: 182 IPSCKRKEAADCSVTPKSTAAPRAKKG---RFKRGVSRKRGFRNGLVNLDFNNIDRSALE 241

Query: 248 PFTTGVVQLPGYVGPVDLAKDTLLNSECRTTDLSSNNNDVLVSNVQSDMPLLLNGNSGNG 307
           PFTT  VQLPGY GPVDLAKDTL NSE RTTDLSS+NNDVLVSNVQSDMP  +N N GNG
Sbjct: 242 PFTTEAVQLPGYAGPVDLAKDTLPNSESRTTDLSSSNNDVLVSNVQSDMPPHVNSNFGNG 301

Query: 308 CSGTFNSNQVNCATSNVMSSPLTDVQPTCSEVANVAAGVTGELQ 352
           CSGT NSNQVNCATSNVMS PLTDVQPTCSEV NVAAGVTGELQ
Sbjct: 302 CSGTLNSNQVNCATSNVMSFPLTDVQPTCSEVGNVAAGVTGELQ 341

[Close]
BLAST of CSPI02G21570.1 vs. ExPASy TrEMBL
Match: A0A6J1K8Y3 (double-stranded RNA-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111492178 PE=4 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 3.1e-145
Identity = 278/351 (79.20%), Postives = 303/351 (86.32%), Query Frame = 0 

Query: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60
           MPAKD+FQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTF+STVIV DVRYDS
Sbjct: 1   MPAKDSFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFYSTVIVKDVRYDS 60

Query: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY 120
           LPGFSNRKAAEQSAAEVALMELSKS+DLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY
Sbjct: 61  LPGFSNRKAAEQSAAEVALMELSKSNDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY 120

Query: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSEKSV 180
           QC+KDD  GR SLFSCTVEIGGIRYIGA AKTKKEAEIKAARTALLAIQSCP SL E SV
Sbjct: 121 QCKKDDSSGRTSLFSCTVEIGGIRYIGAAAKTKKEAEIKAARTALLAIQSCPTSLPENSV 180

Query: 181 NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKRFKRGVLRNRDFINGLVNLDFDN 240
           NQVQLTVIP CKRKEAAD SVKPK+T +PR KKGRFK+    V + +D  +GL NL+F+ 
Sbjct: 181 NQVQLTVIP-CKRKEAADFSVKPKTTGAPRIKKGRFKKV---VSKKKDNRSGLPNLEFNF 240

Query: 241 TDRSTLEPF-TTGVVQLPGYVGPVDLAKDTLLNSECRTTDLSSNNNDVLVSNVQSDMPLL 300
              S+ EP  TTGV  +PG    V+LAKDT+LNSE +TTDLSS+ NDVLVSN+QSD P L
Sbjct: 241 DRSSSFEPLETTGVDPVPGLGESVELAKDTVLNSEYKTTDLSSSGNDVLVSNIQSDTPQL 300

Query: 301 LNGNSGNGCSGTFNSNQVNCATSNVMSSPLTDVQPTCSEVANVAAGVTGEL 351
            NGN GN    TF+SNQ+NC+TS+VMS PL+DVQ TC EVANVA G+TGEL
Sbjct: 301 PNGNIGNDRLDTFSSNQINCSTSDVMSFPLSDVQATCGEVANVATGMTGEL 347

[Close]
BLAST of CSPI02G21570.1 vs. NCBI nr
Match: XP_011649689.1 (double-stranded RNA-binding protein 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 694.5 bits (1791), Expect = 4.7e-196
Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0 

Query: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60
           MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS
Sbjct: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60

Query: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY 120
           LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY
Sbjct: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY 120

Query: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSEKSV 180
           QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSEKSV
Sbjct: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSEKSV 180

Query: 181 NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKRFKRGVLRNRDFINGLVNLDFDN 240
           NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKRFKRGVLRNRDFINGLVNLDFDN
Sbjct: 181 NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKRFKRGVLRNRDFINGLVNLDFDN 240

Query: 241 TDRSTLEPFTTGVVQLPGYVGPVDLAKDTLLNSECRTTDLSSNNNDVLVSNVQSDMPLLL 300
           TDRSTLEPFTTGVVQLPGYVGPVDLAKDTLLNSECRTTDLSSNNNDVLVSNVQSDMPLLL
Sbjct: 241 TDRSTLEPFTTGVVQLPGYVGPVDLAKDTLLNSECRTTDLSSNNNDVLVSNVQSDMPLLL 300

Query: 301 NGNSGNGCSGTFNSNQVNCATSNVMSSPLTDVQPTCSEVANVAAGVTGELQ 352
           NGNSGNGCSGTFNSNQVNCATSNVMSSPLTDVQPTCSEVANVAAGVTGELQ
Sbjct: 301 NGNSGNGCSGTFNSNQVNCATSNVMSSPLTDVQPTCSEVANVAAGVTGELQ 351

[Close]
BLAST of CSPI02G21570.1 vs. NCBI nr
Match: KAA0065099.1 (double-stranded RNA-binding protein 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 627.1 bits (1616), Expect = 9.2e-176
Identity = 323/351 (92.02%), Postives = 327/351 (93.16%), Query Frame = 0 

Query: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60
           MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS
Sbjct: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60

Query: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY 120
           LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY
Sbjct: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY 120

Query: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSEKSV 180
           QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLS KSV
Sbjct: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSV 180

Query: 181 NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKRFKRGVLRNRDFINGLVNLDFDN 240
           NQVQLTVIPSCKRKEAADCSV PKSTA+PRAKKG   RFKRGVLR R F NGLVNLDF+N
Sbjct: 181 NQVQLTVIPSCKRKEAADCSVTPKSTAAPRAKKG---RFKRGVLRKRGFRNGLVNLDFNN 240

Query: 241 TDRSTLEPFTTGVVQLPGYVGPVDLAKDTLLNSECRTTDLSSNNNDVLVSNVQSDMPLLL 300
            DRS LEPFTT  VQLPGY GPVDLAKDTL NSE RTTDLSS+NND LVSNVQSDMP  +
Sbjct: 241 IDRSALEPFTTEAVQLPGYAGPVDLAKDTLPNSESRTTDLSSSNNDFLVSNVQSDMPPHV 300

Query: 301 NGNSGNGCSGTFNSNQVNCATSNVMSSPLTDVQPTCSEVANVAAGVTGELQ 352
           N N GN CSGT NSNQVNCATSNVMS PLTDVQPTCSEV NVAAGVTGELQ
Sbjct: 301 NSNFGNACSGTLNSNQVNCATSNVMSFPLTDVQPTCSEVGNVAAGVTGELQ 348

[Close]
BLAST of CSPI02G21570.1 vs. NCBI nr
Match: XP_008444916.1 (PREDICTED: double-stranded RNA-binding protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 619.0 bits (1595), Expect = 2.5e-173
Identity = 320/351 (91.17%), Postives = 327/351 (93.16%), Query Frame = 0 

Query: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60
           MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRY+S
Sbjct: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNS 60

Query: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY 120
           LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY
Sbjct: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY 120

Query: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSEKSV 180
           QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLS KS+
Sbjct: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSI 180

Query: 181 NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKRFKRGVLRNRDFINGLVNLDFDN 240
           N +QLTVIPSCKRKEAADCSV PKSTA+PRAKKG   RFKRGV R R F NGLVNLDF+N
Sbjct: 181 N-LQLTVIPSCKRKEAADCSVTPKSTAAPRAKKG---RFKRGVSRKRGFRNGLVNLDFNN 240

Query: 241 TDRSTLEPFTTGVVQLPGYVGPVDLAKDTLLNSECRTTDLSSNNNDVLVSNVQSDMPLLL 300
            DRS LEPFTT  VQLPGY GPVDLAKDTL NSE RTTDLSS+NNDVLVSNVQSDMP  +
Sbjct: 241 IDRSALEPFTTEAVQLPGYAGPVDLAKDTLPNSESRTTDLSSSNNDVLVSNVQSDMPPHV 300

Query: 301 NGNSGNGCSGTFNSNQVNCATSNVMSSPLTDVQPTCSEVANVAAGVTGELQ 352
           N N GNGCSGT NSNQVNCATSNVMS PLTDVQPTCSEV NVAAGVTGELQ
Sbjct: 301 NSNFGNGCSGTLNSNQVNCATSNVMSFPLTDVQPTCSEVGNVAAGVTGELQ 347

[Close]
BLAST of CSPI02G21570.1 vs. NCBI nr
Match: XP_008444917.1 (PREDICTED: double-stranded RNA-binding protein 1 isoform X2 [Cucumis melo])

HSP 1 Score: 599.7 bits (1545), Expect = 1.6e-167
Identity = 311/344 (90.41%), Postives = 319/344 (92.73%), Query Frame = 0 

Query: 8   QGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDSLPGFSNR 67
           + VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRY+SLPGFSNR
Sbjct: 2   RSVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNR 61

Query: 68  KAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDG 127
           KAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDG
Sbjct: 62  KAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDG 121

Query: 128 PGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSEKSVNQVQLTV 187
           PGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLS KS+N +QLTV
Sbjct: 122 PGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSIN-LQLTV 181

Query: 188 IPSCKRKEAADCSVKPKSTASPRAKKGRFKRFKRGVLRNRDFINGLVNLDFDNTDRSTLE 247
           IPSCKRKEAADCSV PKSTA+PRAKKG   RFKRGV R R F NGLVNLDF+N DRS LE
Sbjct: 182 IPSCKRKEAADCSVTPKSTAAPRAKKG---RFKRGVSRKRGFRNGLVNLDFNNIDRSALE 241

Query: 248 PFTTGVVQLPGYVGPVDLAKDTLLNSECRTTDLSSNNNDVLVSNVQSDMPLLLNGNSGNG 307
           PFTT  VQLPGY GPVDLAKDTL NSE RTTDLSS+NNDVLVSNVQSDMP  +N N GNG
Sbjct: 242 PFTTEAVQLPGYAGPVDLAKDTLPNSESRTTDLSSSNNDVLVSNVQSDMPPHVNSNFGNG 301

Query: 308 CSGTFNSNQVNCATSNVMSSPLTDVQPTCSEVANVAAGVTGELQ 352
           CSGT NSNQVNCATSNVMS PLTDVQPTCSEV NVAAGVTGELQ
Sbjct: 302 CSGTLNSNQVNCATSNVMSFPLTDVQPTCSEVGNVAAGVTGELQ 341

[Close]
BLAST of CSPI02G21570.1 vs. NCBI nr
Match: XP_011649690.1 (double-stranded RNA-binding protein 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 598.2 bits (1541), Expect = 4.6e-167
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0 

Query: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60
           MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS
Sbjct: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60

Query: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY 120
           LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY
Sbjct: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY 120

Query: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSEKSV 180
           QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSEKSV
Sbjct: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSEKSV 180

Query: 181 NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKRFKRGVLRNRDFINGLVNLDFDN 240
           NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKRFKRGVLRNRDFINGLVNLDFDN
Sbjct: 181 NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKRFKRGVLRNRDFINGLVNLDFDN 240

Query: 241 TDRSTLEPFTTGVVQLPGYVGPVDLAKDTLLNSECRTTDLSSNNNDVLVSNVQSDMPLLL 300
           TDRSTLEPFTTGVVQLPGYVGPVDLAKDTLLNSECRTTDLSSNNNDVLVSNVQSDMPLLL
Sbjct: 241 TDRSTLEPFTTGVVQLPGYVGPVDLAKDTLLNSECRTTDLSSNNNDVLVSNVQSDMPLLL 300

Query: 301 N 302
           N
Sbjct: 301 N 301

[Close]
BLAST of CSPI02G21570.1 vs. TAIR 10
Match: AT1G09700.1 (dsRNA-binding domain-like superfamily protein )

HSP 1 Score: 261.2 bits (666), Expect = 1.2e-69
Identity = 146/235 (62.13%), Postives = 177/235 (75.32%), Query Frame = 0 

Query: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60
           M + D   GVSNCYVFKSRLQEYAQK  LPTPVYE +KEGPSH+  F STVI++ VRY+S
Sbjct: 1   MTSTDVSSGVSNCYVFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNS 60

Query: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY 120
           LPGF NRKAAEQSAAEVAL EL+KSS+L+  VSQPVHETGLCKNLLQEYAQKMN+AIPLY
Sbjct: 61  LPGFFNRKAAEQSAAEVALRELAKSSELSQCVSQPVHETGLCKNLLQEYAQKMNYAIPLY 120

Query: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQS-CPNSLSEKS 180
           QCQK +  GR + F+CTVEIGGI+Y GA  +TKK+AEI A RTALLAIQS   N+L+  +
Sbjct: 121 QCQKVETLGRVTQFTCTVEIGGIKYTGAATRTKKDAEISAGRTALLAIQSDTKNNLANYN 180

Query: 181 VNQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFK----RFKRGVLRNRDFI 231
               QLTV+P C++K         ++  + +A+K +FK    + KR V +N + I
Sbjct: 181 ---TQLTVLP-CEKKTIQAAIPLKETVKTLKARKAQFKKKAQKGKRTVAKNPEDI 231

[Close]
BLAST of CSPI02G21570.1 vs. TAIR 10
Match: AT3G26932.1 (dsRNA-binding protein 3 )

HSP 1 Score: 109.4 bits (272), Expect = 6.0e-24
Identity = 63/158 (39.87%), Postives = 89/158 (56.33%), Query Frame = 0 

Query: 15  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDSLPGFSNRKAAEQSA 74
           ++K++LQE AQ+     P Y   +EGP H P F ++V  N   ++S    S  + AE SA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 75  AEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLF 134
           AEVAL  LS         ++ + ETG+ KNLLQE A +    +P+Y   +  GPG    F
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVR-SGPGHIPTF 120

Query: 135 SCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP 173
           SCTVE+ G+ + G  AKTKK+AE  AA  A  +++  P
Sbjct: 121 SCTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMP 157

[Close]
BLAST of CSPI02G21570.1 vs. TAIR 10
Match: AT3G26932.2 (dsRNA-binding protein 3 )

HSP 1 Score: 109.4 bits (272), Expect = 6.0e-24
Identity = 63/158 (39.87%), Postives = 89/158 (56.33%), Query Frame = 0 

Query: 15  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDSLPGFSNRKAAEQSA 74
           ++K++LQE AQ+     P Y   +EGP H P F ++V  N   ++S    S  + AE SA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 75  AEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLF 134
           AEVAL  LS         ++ + ETG+ KNLLQE A +    +P+Y   +  GPG    F
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVR-SGPGHIPTF 120

Query: 135 SCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP 173
           SCTVE+ G+ + G  AKTKK+AE  AA  A  +++  P
Sbjct: 121 SCTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMP 157

[Close]
BLAST of CSPI02G21570.1 vs. TAIR 10
Match: AT2G28380.1 (dsRNA-binding protein 2 )

HSP 1 Score: 101.7 bits (252), Expect = 1.3e-21
Identity = 63/162 (38.89%), Postives = 90/162 (55.56%), Query Frame = 0 

Query: 15  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDSLPGFSNRKAAEQSA 74
           ++K++LQE AQ+     P Y  I+EGP H P F +TV  N   ++S    S  + AE SA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 75  AEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLF 134
           AEVAL  LS     +   ++ + ETG+ KNLLQE AQ++   +P Y   +  G G   +F
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFR-SGLGHQPVF 120

Query: 135 SCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLS 177
           + TVE+ GI + G  AK KK+AE  AA  A  +++      S
Sbjct: 121 TGTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETS 161

[Close]
BLAST of CSPI02G21570.1 vs. TAIR 10
Match: AT5G41070.1 (dsRNA-binding protein 5 )

HSP 1 Score: 95.9 bits (237), Expect = 6.9e-20
Identity = 76/236 (32.20%), Postives = 118/236 (50.00%), Query Frame = 0 

Query: 15  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDSLPGFSNRKAAEQSA 74
           ++K++LQE AQ+     P Y  I+EGP H P F ++V  N   ++S    S  + AE +A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 75  AEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDG---PGRG 134
           AEV+L  LS         ++ + ETG+ KNLLQE A +    +P+Y   +      PG  
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPG-- 120

Query: 135 SLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQ--SCPNSLSEKSVNQVQLTVIP 194
             FSCTVE+ G+ + G  AKTKK+AE  AA  A  +++  S  +S  E+   +    V+ 
Sbjct: 121 --FSCTVELAGMTFTGESAKTKKQAEKNAAIAAWSSLKKMSSLDSQDEEKEQEAVARVLS 180

Query: 195 SCKRKEAADCSVKPKSTASPRAKKGRFKRFKRGVLRNRDFINGLVNLDFDNTDRST 246
             K KE      + ++T   R +  +    K  ++    +IN L N    ++  ST
Sbjct: 181 RFKPKEVR----RRETTNQWRRRTSQQDSNKDLLIERLRWINLLTNQASSSSSTST 228

The following BLAST results are available for this feature:
BLAST of CSPI02G21570.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O044921.7e-6862.13Double-stranded RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=DRB1 PE... [more]
Q0DJA31.3e-5862.74Double-stranded RNA-binding protein 3 OS=Oryza sativa subsp. japonica OX=39947 G... [more]
Q0IQN61.1e-5761.61Double-stranded RNA-binding protein 8 OS=Oryza sativa subsp. japonica OX=39947 G... [more]
Q0IV633.1e-5761.61Double-stranded RNA-binding protein 7 OS=Oryza sativa subsp. japonica OX=39947 G... [more]
Q0DKP45.9e-2439.87Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 G... [more]
BLAST of CSPI02G21570.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRU82.3e-196100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370450 PE=4 SV=1[more]
A0A5A7VI004.5e-17692.02Double-stranded RNA-binding protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=... [more]
A0A1S3BBH01.2e-17391.17double-stranded RNA-binding protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A1S3BBH37.6e-16890.41double-stranded RNA-binding protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A6J1K8Y33.1e-14579.20double-stranded RNA-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
BLAST of CSPI02G21570.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011649689.14.7e-196100.00double-stranded RNA-binding protein 1 isoform X1 [Cucumis sativus][more]
KAA0065099.19.2e-17692.02double-stranded RNA-binding protein 1 isoform X1 [Cucumis melo var. makuwa][more]
XP_008444916.12.5e-17391.17PREDICTED: double-stranded RNA-binding protein 1 isoform X1 [Cucumis melo][more]
XP_008444917.11.6e-16790.41PREDICTED: double-stranded RNA-binding protein 1 isoform X2 [Cucumis melo][more]
XP_011649690.14.6e-167100.00double-stranded RNA-binding protein 1 isoform X2 [Cucumis sativus][more]
BLAST of CSPI02G21570.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G09700.11.2e-6962.13dsRNA-binding domain-like superfamily protein [more]
AT3G26932.16.0e-2439.87dsRNA-binding protein 3 [more]
AT3G26932.26.0e-2439.87dsRNA-binding protein 3 [more]
AT2G28380.11.3e-2138.89dsRNA-binding protein 2 [more]
AT5G41070.16.9e-2032.20dsRNA-binding protein 5 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014720Double-stranded RNA-binding domainSMARTSM00358DRBM_3coord: 16..83
e-value: 1.8E-20
score: 84.0
coord: 102..169
e-value: 6.5E-18
score: 75.5
IPR014720Double-stranded RNA-binding domainPFAMPF00035dsrmcoord: 103..166
e-value: 4.6E-15
score: 56.1
coord: 17..81
e-value: 8.9E-15
score: 55.2
IPR014720Double-stranded RNA-binding domainPROSITEPS50137DS_RBDcoord: 15..84
score: 14.781431
IPR014720Double-stranded RNA-binding domainPROSITEPS50137DS_RBDcoord: 101..170
score: 12.402353
NoneNo IPR availableGENE3D3.30.160.20coord: 16..97
e-value: 7.3E-26
score: 92.1
NoneNo IPR availableGENE3D3.30.160.20coord: 98..170
e-value: 2.3E-23
score: 84.3
NoneNo IPR availableSUPERFAMILY54768dsRNA-binding domain-likecoord: 16..86
NoneNo IPR availableSUPERFAMILY54768dsRNA-binding domain-likecoord: 103..177
IPR011907Ribonuclease IIIPANTHERPTHR11207RIBONUCLEASE IIIcoord: 1..220
IPR031147Double-stranded RNA-binding proteinPANTHERPTHR11207:SF1DOUBLE-STRANDED RNA-BINDING PROTEIN 1coord: 1..220
IPR044451AtDRB-like, second double-stranded RNA binding domain, plantCDDcd19908DSRM_AtDRB-like_rpt2coord: 100..169
e-value: 3.2134E-31
score: 111.032
IPR044450AtDRB-like, first double-stranded RNA binding domain, plantCDDcd19907DSRM_AtDRB-like_rpt1coord: 15..83
e-value: 1.99522E-32
score: 114.11

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CSPI02G21570CSPI02G21570gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI02G21570.1.utr5p1CSPI02G21570.1.utr5p1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI02G21570.1.cds1CSPI02G21570.1.cds1CDS
CSPI02G21570.1.cds2CSPI02G21570.1.cds2CDS
CSPI02G21570.1.cds3CSPI02G21570.1.cds3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI02G21570.1.utr3p1CSPI02G21570.1.utr3p1three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CSPI02G21570.1CSPI02G21570.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016075 rRNA catabolic process
biological_process GO:0010589 leaf proximal/distal pattern formation
biological_process GO:0010305 leaf vascular tissue pattern formation
biological_process GO:0035279 mRNA destabilization-mediated gene silencing by miRNA
biological_process GO:0031054 pre-miRNA processing
biological_process GO:0010267 production of ta-siRNAs involved in RNA interference
biological_process GO:0009737 response to abscisic acid
biological_process GO:0009733 response to auxin
biological_process GO:0009735 response to cytokinin
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component GO:0010445 nuclear dicing body
molecular_function GO:0003725 double-stranded RNA binding
molecular_function GO:0004525 ribonuclease III activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0042802 identical protein binding
molecular_function GO:0035198 miRNA binding