CSPI01G21490.1 (mRNA) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTCAACATTCTGAGAGATTTGGCACTATTTGCTCTCTGTTCCTTCTTGCTCTTCTCAGGTAATGTTGGTTTTACTATTCTTTTTCTATGCTCATTCTTAGATAAGTTTGACAGTGGAAGTGAGAAAATAAGTATGTATTGCACTATGTTTCTACTAGATATCATATACTTCTTTTACTTGACAATATATAGGATGAGAGAATCTAACTTTGACTTTCAGGTTGATCGTCTAAGCATGTTGTGCCCATTTTGGCAAATATCATATGATGCAGAAATTTGCAACCAAAATGACATTTTAATTTTCATAAGAAACAATTGATAGCGTTCAAAACGTCATGAACCCTAAAAGAAGTCCTGAGAGAAAAATAAAAAATAAAAAGACACTTCCAATCCAAGTTCATAGTGTTCATCATGTAATTGTGTCGGAACGGTCAATCGCTACTTAGTCTCATTCGAGAGTCTAATCTCTTTGTTAAACAACCTATATTGAGCATACCAACTTGAGGCTGAAAACATAATGACACAATTGATTAAGATGAAAATCATTCAAGTGCTCTCTTCATACTTTATTTGCACTCATGGGTCAATTTGGAGATTGACTTAGATTTCTCCTCTTTTCATGGTTATTTACTTAAGATGTCGTCAATTCCACTAGATATTGAATTCTTGATGCAATTCAAATCCATCGGGAAAGTGTTCTCCTGTGGTGGACTGATAATTTTTCTTGGTAAAGAGAATCTTAACTCTGTCAACTGGATAACTTCGAAAAGAAGAATCCAAAATGAAAATGAATGCATGAATCAGGAATGTAACTTATTCACGTTTCAGTGAATGTATCAAATTTTAAATAAAGAAAATGAGAAATTGATGCAGTTTTGATCTCTTCAGGTTCAAGTTTAGCAGAGAAATCACCTATACAAGAAGAAAATCAAGAAAACATACCTCTACAGAATGAAGAAGATAGAACAATCGTCTCACCTTCTTTACATTTCACTCAGTTGGATGACACTACCATTGTTAACCCAACAACTTCTGGAGGAACTCCAGTTGCACCACCACAGTCTGTACCAAACATAGTAGACCCCAATGTGAATCCCACTGCAGTGTCGGGGAATCCAGGTGGAGGTTCGTGGTGTATTGCAAACTCTGCAGCTTCCCCAACTGCTCTGCAGGTGGCTCTTGACTATGCTTGTGGCTATGGCGGTGCAGACTGTTCTGCGATTCAGCCAGGTGGGAGCTGCTATGACCCAAACACAGTGAAAGATCATGCCTCTTATGCCTTCAATGACTATTACCAGAAGAATCCAGCGGCTACTAGCTGTGTTTTTGGAGGAACAGCACAACTCGTCAGTACAGACCCAAGTATGGCATTTTCACCTTTTTGATTCATCAACCCCTGTTGTCACTTGTGGTAGCCAATTTTAAGAGATTTTTTTAACAACCAAACTAAGCTCAGACATGTTCTATTGACTACAAGAGTTTCTACTAGATCTGTGAATCCTTCTAACATCTTTTTATCCAATAGAAATTGACCGTTCTACAAAGTAATAGGAAGTACTTTTATTAAATCACAAATTATGCTTTCCTTTGAAGGCAATCCATTTTGGTTATACCTAGATAGCACAACTACTTCTCATTCAACCTTGTTATGAATGTGCCCGATTCTCTACTTCATCTTTCTCATCCTCGTTTCCTGGTAGAGAAGCAGCGATGAGGAAACTTTAGTGACAGAGTTTCCTAAAAAGGTCATATCCTATTATTTAAAGATAAAAACTAAGTAGTGGAGCCTAACAAAGTCATAGCTCAAAGGTGAAATAAAATCTCAGGAATTAGTATGTTGTAATGTTTTATTAACAATTGTTGTGTCTAAATTACATTGCAGGTAATGGTAACTGTCACTACGCCAAACCCGGAGCTGTGCTGAGGTAAATCCTTAAGAGCTCAGTATTCATTTTACTAAGAGACTATAAGTTACCCATAAAAGAAAAGAAATCAGTAAAGGAAGCAAAATCAGAGCTAATAATTTCTTTATGTATCTTTCACAGCCCTCCACCAGCAACCCCACCACCCCCGGCACCTGTCATCCCAACACCAACTCCGCCAGCCCCCACAGTTGAAACACCGCCACCGCCAGCCACCACGAACCCTACATATACACCTACAAACCCAACATATACGCCCACAGATCCATCAATTTATGGTGCAGAACCATCAGGCATGCCCAGCTCAGCCACTTCGATATCAAAACGATTGGTGCTGCTTTGGATCATAACTTACCTTATGGGTTTGCTCGTGGCAAATCATCTGTAAGCCGAAGAAATTGTTTCTTTTCTCCACAGAGAGATGGCAATCGCTTATTTGCTGCACATTTTTGCATTGTTAGACATCAATATGGTAAAAGAAAGATTATATAGTAAGTTATTGCTGTTATACATCAGGTTATGCATTAGATAACTAAGAAGTCCACAGGAACATACATCAGTAGATTAAAGAAATAAATAGGTCATATGCTATTCATAAGATATTTCACATTGTTACCCAATAAAAAGATATAGACAGGTCAACTCCAATTTGGATGAATGTTAGCAAATAATATAGATAAGTCAATTCCATTTGGAAGCTCTTTAGGTTGGTTTTCCAGGGAAGAGGCATTGTACTCGAGCTTCAGCTTGCACGAGTTCATTTAGTTTTATCTATTAATGACAACTTTGTCCAATTTAAGATTGTTCGCTGTACAATGTACAAATTATTCAATAAACCGCAGATGATAGAAAGCAAGTTCACAAACTGCCATATATAACTAGTTAGTGCTGATGTTATTTGAAAGGGAAACAAGTAATTGTTCAGGTTCAATCTG ATGGGTTTCAACATTCTGAGAGATTTGGCACTATTTGCTCTCTGTTCCTTCTTGCTCTTCTCAGGTTCAAGTTTAGCAGAGAAATCACCTATACAAGAAGAAAATCAAGAAAACATACCTCTACAGAATGAAGAAGATAGAACAATCGTCTCACCTTCTTTACATTTCACTCAGTTGGATGACACTACCATTGTTAACCCAACAACTTCTGGAGGAACTCCAGTTGCACCACCACAGTCTGTACCAAACATAGTAGACCCCAATGTGAATCCCACTGCAGTGTCGGGGAATCCAGGTGGAGGTTCGTGGTGTATTGCAAACTCTGCAGCTTCCCCAACTGCTCTGCAGGTGGCTCTTGACTATGCTTGTGGCTATGGCGGTGCAGACTGTTCTGCGATTCAGCCAGGTGGGAGCTGCTATGACCCAAACACAGTGAAAGATCATGCCTCTTATGCCTTCAATGACTATTACCAGAAGAATCCAGCGGCTACTAGCTGTGTTTTTGGAGGAACAGCACAACTCGTCAGTACAGACCCAAGTAATGGTAACTGTCACTACGCCAAACCCGGAGCTGTGCTGAGCCCTCCACCAGCAACCCCACCACCCCCGGCACCTGTCATCCCAACACCAACTCCGCCAGCCCCCACAGTTGAAACACCGCCACCGCCAGCCACCACGAACCCTACATATACACCTACAAACCCAACATATACGCCCACAGATCCATCAATTTATGGTGCAGAACCATCAGGCATGCCCAGCTCAGCCACTTCGATATCAAAACGATTGGTGCTGCTTTGGATCATAACTTACCTTATGGGTTTGCTCGTGGCAAATCATCTGTAAGCCGAAGAAATTGTTTCTTTTCTCCACAGAGAGATGGCAATCGCTTATTTGCTGCACATTTTTGCATTGTTAGACATCAATATGGTAAAAGAAAGATTATATAGTAAGTTATTGCTGTTATACATCAGGTTATGCATTAGATAACTAAGAAGTCCACAGGAACATACATCAGTAGATTAAAGAAATAAATAGGTCATATGCTATTCATAAGATATTTCACATTGTTACCCAATAAAAAGATATAGACAGGTCAACTCCAATTTGGATGAATGTTAGCAAATAATATAGATAAGTCAATTCCATTTGGAAGCTCTTTAGGTTGGTTTTCCAGGGAAGAGGCATTGTACTCGAGCTTCAGCTTGCACGAGTTCATTTAGTTTTATCTATTAATGACAACTTTGTCCAATTTAAGATTGTTCGCTGTACAATGTACAAATTATTCAATAAACCGCAGATGATAGAAAGCAAGTTCACAAACTGCCATATATAACTAGTTAGTGCTGATGTTATTTGAAAGGGAAACAAGTAATTGTTCAGGTTCAATCTG ATGGGTTTCAACATTCTGAGAGATTTGGCACTATTTGCTCTCTGTTCCTTCTTGCTCTTCTCAGGTTCAAGTTTAGCAGAGAAATCACCTATACAAGAAGAAAATCAAGAAAACATACCTCTACAGAATGAAGAAGATAGAACAATCGTCTCACCTTCTTTACATTTCACTCAGTTGGATGACACTACCATTGTTAACCCAACAACTTCTGGAGGAACTCCAGTTGCACCACCACAGTCTGTACCAAACATAGTAGACCCCAATGTGAATCCCACTGCAGTGTCGGGGAATCCAGGTGGAGGTTCGTGGTGTATTGCAAACTCTGCAGCTTCCCCAACTGCTCTGCAGGTGGCTCTTGACTATGCTTGTGGCTATGGCGGTGCAGACTGTTCTGCGATTCAGCCAGGTGGGAGCTGCTATGACCCAAACACAGTGAAAGATCATGCCTCTTATGCCTTCAATGACTATTACCAGAAGAATCCAGCGGCTACTAGCTGTGTTTTTGGAGGAACAGCACAACTCGTCAGTACAGACCCAAGTAATGGTAACTGTCACTACGCCAAACCCGGAGCTGTGCTGAGCCCTCCACCAGCAACCCCACCACCCCCGGCACCTGTCATCCCAACACCAACTCCGCCAGCCCCCACAGTTGAAACACCGCCACCGCCAGCCACCACGAACCCTACATATACACCTACAAACCCAACATATACGCCCACAGATCCATCAATTTATGGTGCAGAACCATCAGGCATGCCCAGCTCAGCCACTTCGATATCAAAACGATTGGTGCTGCTTTGGATCATAACTTACCTTATGGGTTTGCTCGTGGCAAATCATCTGTAA MGFNILRDLALFALCSFLLFSGSSLAEKSPIQEENQENIPLQNEEDRTIVSPSLHFTQLDDTTIVNPTTSGGTPVAPPQSVPNIVDPNVNPTAVSGNPGGGSWCIANSAASPTALQVALDYACGYGGADCSAIQPGGSCYDPNTVKDHASYAFNDYYQKNPAATSCVFGGTAQLVSTDPSNGNCHYAKPGAVLSPPPATPPPPAPVIPTPTPPAPTVETPPPPATTNPTYTPTNPTYTPTDPSIYGAEPSGMPSSATSISKRLVLLWIITYLMGLLVANHL* Homology
BLAST of CSPI01G21490.1 vs. ExPASy Swiss-Prot
Match: Q8VYE5 (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana OX=3702 GN=At4g29360 PE=2 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.8e-24 Identity = 69/138 (50.00%), Postives = 84/138 (60.87%), Query Frame = 0
BLAST of CSPI01G21490.1 vs. ExPASy Swiss-Prot
Match: O65399 (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3) HSP 1 Score: 97.4 bits (241), Expect = 2.7e-19 Identity = 50/101 (49.50%), Postives = 66/101 (65.35%), Query Frame = 0
BLAST of CSPI01G21490.1 vs. ExPASy Swiss-Prot
Match: P52409 (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum OX=4565 GN=GLC1 PE=2 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 3.0e-18 Identity = 62/155 (40.00%), Postives = 85/155 (54.84%), Query Frame = 0
BLAST of CSPI01G21490.1 vs. ExPASy Swiss-Prot
Match: Q9M069 (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana OX=3702 GN=At4g34480 PE=1 SV=2) HSP 1 Score: 93.2 bits (230), Expect = 5.0e-18 Identity = 46/97 (47.42%), Postives = 59/97 (60.82%), Query Frame = 0
BLAST of CSPI01G21490.1 vs. ExPASy Swiss-Prot
Match: Q9FJU9 (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana OX=3702 GN=At5g56590 PE=2 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 6.6e-18 Identity = 46/102 (45.10%), Postives = 61/102 (59.80%), Query Frame = 0
BLAST of CSPI01G21490.1 vs. ExPASy TrEMBL
Match: A0A0A0M054 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G459490 PE=4 SV=1) HSP 1 Score: 543.9 bits (1400), Expect = 4.0e-151 Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0
BLAST of CSPI01G21490.1 vs. ExPASy TrEMBL
Match: A0A1S3B947 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4-like OS=Cucumis melo OX=3656 GN=LOC103487389 PE=4 SV=1) HSP 1 Score: 507.3 bits (1305), Expect = 4.1e-140 Identity = 269/282 (95.39%), Postives = 272/282 (96.45%), Query Frame = 0
BLAST of CSPI01G21490.1 vs. ExPASy TrEMBL
Match: A0A6J1JX26 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1-like OS=Cucurbita maxima OX=3661 GN=LOC111490458 PE=4 SV=1) HSP 1 Score: 387.1 bits (993), Expect = 6.2e-104 Identity = 217/292 (74.32%), Postives = 233/292 (79.79%), Query Frame = 0
BLAST of CSPI01G21490.1 vs. ExPASy TrEMBL
Match: A0A6J1GUD6 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1-like OS=Cucurbita moschata OX=3662 GN=LOC111457203 PE=4 SV=1) HSP 1 Score: 382.9 bits (982), Expect = 1.2e-102 Identity = 214/292 (73.29%), Postives = 234/292 (80.14%), Query Frame = 0
BLAST of CSPI01G21490.1 vs. ExPASy TrEMBL
Match: A0A6J1CFQ5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Momordica charantia OX=3673 GN=LOC111010802 PE=4 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 1.8e-98 Identity = 212/289 (73.36%), Postives = 231/289 (79.93%), Query Frame = 0
BLAST of CSPI01G21490.1 vs. NCBI nr
Match: XP_004147432.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 [Cucumis sativus] >KGN65571.1 hypothetical protein Csa_019736 [Cucumis sativus]) HSP 1 Score: 543.9 bits (1400), Expect = 8.2e-151 Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0
BLAST of CSPI01G21490.1 vs. NCBI nr
Match: XP_008443913.1 (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 4-like [Cucumis melo]) HSP 1 Score: 507.3 bits (1305), Expect = 8.5e-140 Identity = 269/282 (95.39%), Postives = 272/282 (96.45%), Query Frame = 0
BLAST of CSPI01G21490.1 vs. NCBI nr
Match: XP_038896033.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4-like [Benincasa hispida]) HSP 1 Score: 448.0 bits (1151), Expect = 6.1e-122 Identity = 238/285 (83.51%), Postives = 253/285 (88.77%), Query Frame = 0
BLAST of CSPI01G21490.1 vs. NCBI nr
Match: XP_022994857.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1-like [Cucurbita maxima]) HSP 1 Score: 387.1 bits (993), Expect = 1.3e-103 Identity = 217/292 (74.32%), Postives = 233/292 (79.79%), Query Frame = 0
BLAST of CSPI01G21490.1 vs. NCBI nr
Match: KAG7012512.1 (Glucan endo-1,3-beta-glucosidase 12, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 383.6 bits (984), Expect = 1.4e-102 Identity = 214/292 (73.29%), Postives = 234/292 (80.14%), Query Frame = 0
BLAST of CSPI01G21490.1 vs. TAIR 10
Match: AT1G29380.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 156.4 bits (394), Expect = 3.4e-38 Identity = 98/192 (51.04%), Postives = 124/192 (64.58%), Query Frame = 0
BLAST of CSPI01G21490.1 vs. TAIR 10
Match: AT2G30933.2 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 119.0 bits (297), Expect = 6.1e-27 Identity = 77/180 (42.78%), Postives = 100/180 (55.56%), Query Frame = 0
BLAST of CSPI01G21490.1 vs. TAIR 10
Match: AT4G29360.1 (O-Glycosyl hydrolases family 17 protein ) HSP 1 Score: 114.0 bits (284), Expect = 2.0e-25 Identity = 69/138 (50.00%), Postives = 84/138 (60.87%), Query Frame = 0
BLAST of CSPI01G21490.1 vs. TAIR 10
Match: AT2G30933.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 112.1 bits (279), Expect = 7.4e-25 Identity = 89/222 (40.09%), Postives = 114/222 (51.35%), Query Frame = 0
BLAST of CSPI01G21490.1 vs. TAIR 10
Match: AT1G09460.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 105.9 bits (263), Expect = 5.3e-23 Identity = 88/214 (41.12%), Postives = 115/214 (53.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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