Bhi12M000760 (mRNA) Wax gourd (B227) v1

Overview


Name	Bhi12M000760
Type	mRNA
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr12: 26582731 .. 26583842 (-)
Sequence length	1112
RNA-Seq Expression	Bhi12M000760
Synteny	Bhi12M000760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTAGAGGAATCAAAATGGTATTAAAAAAAGAAAGGAAAAGAAAAGAAGTATTCCCTTAGCTGGGAATCCAAACACTCCTATTCTCTCAAAGTCTTCAAAGTTTTATACAGTTTCCATGCACCCATCACCTAACTCATTTCCCACTCTTCTTCTCTCTAAAAATTAAAAAAAAAATAAAAAAAATGCTTCCTCTCAATTTTCTCCTTTTCCTCAATTTCCTCCTCCTCAATTTCCCCCTTCCTCCGCCGTTTCCTCCGCCACCGTCCGCCGCCTCGACGACACCACCGTCCCACCCCCCCGCCGACCCCACCGTCAAGTGCTCCCCAATGCGAACAGAACCCTCCATCTCCGCCCGCCGCCGGTGGTCTACCCCTCGCCCCCGCCGCCGTCTCCTCCGCCGCCCGATGTCCTCCCCTACTACTCCCCCCACCCCCCAAGAAGAAGGAGCCCAAGACCCCCAACTGCCTCTCAACCCCGCCCTCTCCGTCCTTCATGTACATAACCGGCCCTCCTGGCGACCTCTATCCTATCGACCAGAATTATATTTCCGCCGGCCGGAGATCCATCGCCGCCGCGGCCTCCGCCGTGGTTGGGCTTGTTCTAGCGGGGCTTCTGTTGGTTTAAATCTGTGGGATCTCAACCCAATTTCTCGTAAGGTAAGACTAAATTCCCGTACGAGATTTTCTTAAATTTCGGATATTGTTTTAGAATTTTTATGGATCATCATCATTTTCTTGTCCAATAATTTTGTAATTTGTACTAAATATTTAATTGTCCAGAAATTTATGATCATAAAAAGAAAATTTATGTGTTTTTGTTTAGCAATTTATTTTCCTCTCCTTTTTCAATCAATATCTGAAAAATTAGATCAGATATTTTATGCGATTATATATATATATATATACACTTTACTTTCCCTTCTTATTCAATATGAATAAATTTGGATCGATTCAATCGCTATCGTCGCCTAACTATATAATTGAGATTGTAATTATACCTAAATTGATTAGGTTTTTATTGATTTAAGTTACAATATTTATTAATTTATTTCTTTTTTTCTAGTGACAGAGCCATGATTTTTTCCTTCAGAATATCTCAAATAGCAATAACG

mRNA sequence

GTTAGAGGAATCAAAATGGTATTAAAAAAAGAAAGGAAAAGAAAAGAAGTATTCCCTTAGCTGGGAATCCAAACACTCCTATTCTCTCAAAGTCTTCAAAGTTTTATACAGTTTCCATGCACCCATCACCTAACTCATTTCCCACTCTTCTTCTCTCTAAAAATTAAAAAAAAAATAAAAAAAATGCTTCCTCTCAATTTTCTCCTTTTCCTCAATTTCCTCCTCCTCAATTTCCCCCTTCCTCCGCCGTTTCCTCCGCCACCGTCCGCCGCCTCGACGACACCACCGTCCCACCCCCCCGCCGACCCCACCGTCAAGTGCTCCCCAATGCGAACAGAACCCTCCATCTCCGCCCGCCGCCGGTGGTCTACCCCTCGCCCCCGCCGCCGTCTCCTCCGCCGCCCGATGTCCTCCCCTACTACTCCCCCCACCCCCCAAGAAGAAGGAGCCCAAGACCCCCAACTGCCTCTCAACCCCGCCCTCTCCGTCCTTCATGTACATAACCGGCCCTCCTGGCGACCTCTATCCTATCGACCAGAATTATATTTCCGCCGGCCGGAGATCCATCGCCGCCGCGGCCTCCGCCGTGGTTGGGCTTGTTCTAGCGGGGCTTCTGTTGGTTTAAATCTGTGGGATCTCAACCCAATTTCTCGTAAGGTAAGACTAAATTCCCGTACGAGATTTTCTTAAATTTCGGATATTGTTTTAGAATTTTTATGGATCATCATCATTTTCTTGTCCAATAATTTTGTAATTTGTACTAAATATTTAATTGTCCAGAAATTTATGATCATAAAAAGAAAATTTATGTGTTTTTGTTTAGCAATTTATTTTCCTCTCCTTTTTCAATCAATATCTGAAAAATTAGATCAGATATTTTATGCGATTATATATATATATATATACACTTTACTTTCCCTTCTTATTCAATATGAATAAATTTGGATCGATTCAATCGCTATCGTCGCCTAACTATATAATTGAGATTGTAATTATACCTAAATTGATTAGGTTTTTATTGATTTAAGTTACAATATTTATTAATTTATTTCTTTTTTTCTAGTGACAGAGCCATGATTTTTTCCTTCAGAATATCTCAAATAGCAATAACG

Coding sequence (CDS)

ATGCTTCCTCTCAATTTTCTCCTTTTCCTCAATTTCCTCCTCCTCAATTTCCCCCTTCCTCCGCCGTTTCCTCCGCCACCGTCCGCCGCCTCGACGACACCACCGTCCCACCCCCCCGCCGACCCCACCGTCAAGTGCTCCCCAATGCGAACAGAACCCTCCATCTCCGCCCGCCGCCGGTGGTCTACCCCTCGCCCCCGCCGCCGTCTCCTCCGCCGCCCGATGTCCTCCCCTACTACTCCCCCCACCCCCCAAGAAGAAGGAGCCCAAGACCCCCAACTGCCTCTCAACCCCGCCCTCTCCGTCCTTCATGTACATAACCGGCCCTCCTGGCGACCTCTATCCTATCGACCAGAATTATATTTCCGCCGGCCGGAGATCCATCGCCGCCGCGGCCTCCGCCGTGGTTGGGCTTGTTCTAGCGGGGCTTCTGTTGGTTTAAATCTGTGGGATCTCAACCCAATTTCTCGTAAGGTAAGACTAAATTCCCGTACGAGATTTTCTTAA

Protein sequence

MLPLNFLLFLNFLLLNFPLPPPFPPPPSAASTTPPSHPPADPTVKCSPMRTEPSISARRRWSTPRPRRRLLRRPMSSPTTPPTPQEEGAQDPQLPLNPALSVLHVHNRPSWRPLSYRPELYFRRPEIHRRRGLRRGWACSSGASVGLNLWDLNPISRKVRLNSRTRFS

Homology

The following BLAST results are available for this feature:

BLAST of Bhi12M000760 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi12M000760 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi12M000760 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi12M000760 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..94

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi12G000760	Bhi12G000760	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi12M000760.exon1	Bhi12M000760.exon1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi12M000760.utr3p1	Bhi12M000760.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi12M000760	cds.Bhi12M000760	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi12M000760.utr5p1	Bhi12M000760.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi12M000760	Bhi12M000760-protein	polypeptide