Bhi12M000604 (mRNA) Wax gourd (B227) v1

Overview


Name	Bhi12M000604
Type	mRNA
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr12: 20462148 .. 20462392 (+)
Sequence length	189
RNA-Seq Expression	Bhi12M000604
Synteny	Bhi12M000604

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAAGAGGAGGAAGAAGAAATTAAGAGAAGAGAAGTGAAGGAGGCGCAAACGAAGGAAAAGATTATGCATCGAAAGGAAGAGAAAAGGCTCGAACAAGAGCAATGTGAGAAAGAAAAACGAGAAGAGGAGAGAAAGAAGAAAAGAGTTGGGCGTGTAGTTTTTGAGTGCCCAAAGGACACAAAAGCCCAGGCAAATTTCCCACCAAATAGGGTTGGCAAAATTCCCCACGGGGCCTTTGA

mRNA sequence

ATGGAAGAAGAGGAGGAAGAAGAAATTAAGAGAAGAGAAGTGAAGGAGGCGCAAACGAAGGAAAAGATTATGCATCGAAAGGAAGAGAAAAGGCTCGAACAAGAGCAATGTGAGAAAGAAAAACGAGAAGAGGAGAGAAAGAAGAAAAGAGTTGGGCGTGGTTGGCAAAATTCCCCACGGGGCCTTTGA

Coding sequence (CDS)

ATGGAAGAAGAGGAGGAAGAAGAAATTAAGAGAAGAGAAGTGAAGGAGGCGCAAACGAAGGAAAAGATTATGCATCGAAAGGAAGAGAAAAGGCTCGAACAAGAGCAATGTGAGAAAGAAAAACGAGAAGAGGAGAGAAAGAAGAAAAGAGTTGGGCGTGGTTGGCAAAATTCCCCACGGGGCCTTTGA

Protein sequence

MEEEEEEEIKRREVKEAQTKEKIMHRKEEKRLEQEQCEKEKREEERKKKRVGRGWQNSPRGL

Homology

The following BLAST results are available for this feature:

BLAST of Bhi12M000604 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi12M000604 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi12M000604 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi12M000604 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 2..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..52

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi12G000604	Bhi12G000604	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi12M000604.exon1	Bhi12M000604.exon1	exon
Bhi12M000604.exon2	Bhi12M000604.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi12M000604	cds.Bhi12M000604	CDS
cds.Bhi12M000604	cds.Bhi12M000604_2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi12M000604	Bhi12M000604-protein	polypeptide