Bhi12M000301 (mRNA) Wax gourd (B227) v1

Overview


Name	Bhi12M000301
Type	mRNA
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr12: 9456882 .. 9461006 (+)
Sequence length	4125
RNA-Seq Expression	Bhi12M000301
Synteny	Bhi12M000301

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAACATTTATAATATAAATGATGCAAGAATAATGCATAACCTATGGTGAGATTTTTACTATATGACATACATTATGTCATATATAAAATAATTAAACCATACATCATATACATAATTTAAACAACAATTATGGATCAAGATTGTACTCCTAAAGTATTAATTAAATTAATATAACATTTATAGTAATTTAATTAATAAAAAACTATTACATTCAAAATAGTTAAATCTGTTCAAAACAAGTGAACCGGCCCTTGAACCGCACGAACCATACCGCTCAACCTCTGAACCACCCTTGAACTACTCGAACCAAGCGAACCGAACACAAACCAATCAAGCTACGAACCAAACCGCGTGCGAACCAGAAAATTTGTTAAGTCTCGAAGTGTTGCAATATTCTGTTCTAGCATTGCAACGCTATGAAAAAAATTTCGTTCCGCCTCATCGCAACATTGCAATGCTGCGGTACAGCCTGTACTGTACAGCCGCAATCTCCTTCAAATTTCCTCCATTTTTGACCTCGTTTTCTCTAGATACTCATCGGGAACAGCACGAGTGACTAAAACACAATAAAATACAAACTCGATAGCATTTAATACCCAAAACAATGGGCCCTTACAAATCAAATTTGTAAACATAAAGCTGTAAAACTAAAGCTAATCCTGAAATGTCCAAAATTGCAAACCATTCAAAAAATCATTAGAATGCACCCACCATAACTCTATAAAACAATTCTGAAAAAAATTTAAAAAAATGGGACCAAAACCGTCCACTCTAATACCAATTGAAGGAACCTGTGAAGACTCCGCAACGAAAATGTGGGGATCGGTCCCAATTTTGTTTTTCACAGAATCACAAAATTTTACAAAACAGAACAAATTATGCATTAACAAAATATTACAGCATGCTTTGGAGGGAATTAAGAAAAGAAAAGAGGACTTACCTTGAAGCCAATCTTCTTCGCGTAGTCTCTCGATCCGATCACGAACGTTTCGAACTTCGATCCGAAATCCCAAAATGGGCACCACTACTAGAGAATTTTATGTATTCTGTTGGGATTGAAAATTCAAGCAAAAGTTGCGAGCTTTGCTTGAATTTTAGAAAGGGAGGAAAGGAAGAGAGGAGGGAGAAGAAAACTTGCTTTTCTTCTATGTTTTTCCAGGGAGATGAACCAGAGAGAGTTCTCTGTTTCAAAAAACAGAAATTGTGGAAGAAGAAAACCGAACCACCACACATCCACGTTATGGTTGAGAAAGTTAAGGAGATGGAGTTGTAACTCCCTCCCTTTAATTAATAATTATATATATATATACACACACTATATGTTATATCAAATATGTAAATCTCTATTATTAACGGCGCTATATAATGAGACTAGTCATTTCGTAGTCTGATCTTATACAAACTCTAGGATACCCCGCTCACATGTCTCCACATGAATGATCAGGATCAGATCATTTGTAGTACTTTACAACACTTGTAACATCTACAATGCAGGTCGTATCCATAGTGTTACCATGATAAGGTACCCAGCCTTATCCATCTACTACAAACCGTTCAGGTTATCATTTAAAAATGATTCACCTATGTATCTCTACATACATGTTTAAATTATATAAAATAATTAAGATCTTAGTTCGTTTGATTGAATGTATACTCATAAAATAACAATTATTTTATTAATAATAATTTTTTTATACAATGTTTACAAACTACGAGAATACAATAGAGATTTCAGGACGATCCCAACACAACTGTCTATAGTCATAATTTTTTCAAGTCTTTTCATTAAAGTTCTTTACCACATTTTTCCATCCAATTTTATTTAAATGACAATTAGACCTGTTCCCATTTAAAGTTTCGCCAACACACTTGTATTAATGTATTAAGAGTGGTATCGTCCCAAATAGCTTTTATGTGCTTATCTTTTTCATCACTAAGAATTATATTTTTAGACATTCTAAAAGAAAAAGGGAGTAAATTCATTCTTCAAACAAAACTTTGACAGGAACAAATATAAAAGAAAAGACAAAAAAAGATACATTTTCCTATATTAGCAACATAATGCAACATGAAATAAACTTAAAAATAATGTGGAAATAAATGGAGGTAGCCAGAGCAATGACACATAATTGGCCAAAGCAATGACAAAAAATTAAACTTAAGAATCAAGCCACGTTATACACTAGCTGATGTGGTTTCCCATATGACACCTAATATTCAAAAGAAAGGACTTGGAAAGTGCTCATAACTTCTAATTTACCTAAAAATCTGCATTAATCAAACCTTTATCAACTTTGAACTCTTATCTGCAAAACATGTGCCAAACAATGGTAGGGTACTATTTTTTCTTGGTATTTTTTTATTTGATATTGTATATCTGCAGGATATTGAATTATTGTTTCTTGGATGGACTACATTTATCAACTCATTTTCTTCCCAATATCTACGTTTCTAATATGATTGGAATCATTGTGTCTAACTACATTCTTTTGTCTTTACCTTATAATGCCATGTTTTTAGTTTCTTTCCAATTGTACGATCTTAAGCAGCAAGGTTTCATAGAGAGACAAGAGGTAAAACTTTGTTCCTTGCCCTGAACTTCTCTACCTGTCATTATTTAATATTTCTGCTTACTTCTTGAAAGTTTGATGAACTTACTTATCGGTTTCGAAACGGATGTTCTCTTTCAACGAGGACATTCCAACACAATTCAACAAGGATAGAGGACCTGAATCGTCTTTGATAAGAATTAGGTAATACCCTTTTGAATTTGATCAATGTTTTAGAGAGGTAGCTTCTAACCATTGAATCTTAGCTTTGGTTAATTTTTTATAGATCCAAAACAGGTGGTCTTCGAGAATATGCTAAAAAGAGACTCATCATTATCTACTTCAATGAAACCAAAATTTTATGCACAAATGCCACCTTTGCACATGCAAACTACCTCAAAAAACCTTTCCCACCTCGTAGAAACCAAAAAATTGAAAGGTGGAAAATTAGTATGCACAAACAGTCATCAAAATTCTAAAACATAGTTCAATTTTAATCCCTCCAATCTAGACAAAATTTCAACAACCCTTCTAACCGAAATCACCCAGAAAAAAGTCAGAGCAACCCCTTTTTTTCTCAAATGGCAATCAAGCTCCCAACTCCGACAGCAAAACTTTAACAAATTATTAAGGAATCACAAAAAAAGCCAATGGAACGAAGAGATTCTTTTGAGACCGAAAAACCAGTAAACGAAGAGATCCTTCCAAGGACTGTTTTCCTCAGCTTTTTCAAATTGTTTCATCTCTAAAGGGCGTGTCAATGATCTTTTGAACGTTTTCTTCACATACCCATTCCTCAAAACTTTACCAACAATCAACCAGAGTCAACCACGCGATTGGATCAAGAATTTCGAAAAGCTACGATCTCTTGAATTGACCAAATTCTAAGGCAAATAGAAGAAACAATAGAAAATTTTGTCAAACACATTCACAACACCAACGAAACCACACATTAAGAACCAAATTCCAGATCAAAATCAACCCTAAACCCTAAAATTCACATAAACATTTTAACAAACATGTTCTAGGTAGCAATCAACAAGTGAGATTTAGTAACTCAAGATTCCAAAAAAAACCCACTCCGATTCTTCCACAAACAACCGGATGCTTTCAATAAAAATAACAGAATAGACCATAAAAAATAACGAAAAACTCAAGACTATTACAAAATCATACAAATAAATACCTGGAATGATGAGGATAGAAGGAAAAGAGACAATGGAAGCTTCTGGAACTACGAGGATGAAGAAGATCGTTGAGAGGCCATCAAAGTTGTTGGACCGGTGAGGATGGAGAGCTTCTTGAGAGGAAGTTGAAGCTGCTGTATGAGGAGGGAGAAAGACCTGAGAGAGATGATAGTTTGATGCTTAAATATAGGGGTATTTTAGGTATTTCAAAAACTACATAAAATAAGGAGAAATTTTGCTGGTGATTCTCGGTTAATCATCTTTTACACAATCACCATCCAACTGATATTTCATAAATCAATTTTTAGTGATTTTAGATTTTTTGAAAATCAATTTTATTAGATTGCCAAACACCATCATTTTATGTAAAATTTATTTTAGCAAGAAAA

mRNA sequence

TAACATTTATAATATAAATGATGCAAGAATAATGCATAACCTATGGTGAGATTTTTACTATATGACATACATTATGTCATATATAAAATAATTAAACCATACATCATATACATAATTTAAACAACAATTATGGATCAAGATTGTACTCCTAAAGTATTAATTAAATTAATATAACATTTATAGTAATTTAATTAATAAAAAACTATTACATTCAAAATAGTTAAATCTGTTCAAAACAAGTGAACCGGCCCTTGAACCGCACGAACCATACCGCTCAACCTCTGAACCACCCTTGAACTACTCGAACCAAGCGAACCGAACACAAACCAATCAAGCTACGAACCAAACCGCGTGCGAACCAGAAAATTTGTTAAGTCTCGAAGTGTTGCAATATTCTGTTCTAGCATTGCAACGCTATGAAAAAAATTTCGTTCCGCCTCATCGCAACATTGCAATGCTGCGGTACAGCCTGTACTGTACAGCCGCAATCTCCTTCAAATTTCCTCCATTTTTGACCTCGTTTTCTCTAGATACTCATCGGGAACAGCACGAGTGACTAAAACACAATAAAATACAAACTCGATAGCATTTAATACCCAAAACAATGGGCCCTTACAAATCAAATTTGTAAACATAAAGCTGTAAAACTAAAGCTAATCCTGAAATGTCCAAAATTGCAAACCATTCAAAAAATCATTAGAATGCACCCACCATAACTCTATAAAACAATTCTGAAAAAAATTTAAAAAAATGGGACCAAAACCGTCCACTCTAATACCAATTGAAGGAACCTGTGAAGACTCCGCAACGAAAATGTGGGGATCGGTCCCAATTTTGTTTTTCACAGAATCACAAAATTTTACAAAACAGAACAAATTATGCATTAACAAAATATTACAGCATGCTTTGGAGGGAATTAAGAAAAGAAAAGAGGACTTACCTTGAAGCCAATCTTCTTCGCGTAGTCTCTCGATCCGATCACGAACGTTTCGAACTTCGATCCGAAATCCCAAAATGGGCACCACTACTAGAGAATTTTATGTATTCTGTTGGGATTGAAAATTCAAGCAAAAGTTGCGAGCTTTGCTTGAATTTTAGAAAGGGAGGAAAGGAAGAGAGGAGGGAGAAGAAAACTTGCTTTTCTTCTATGTTTTTCCAGGGAGATGAACCAGAGAGAGTTCTCTGTTTCAAAAAACAGAAATTGTGGAAGAAGAAAACCGAACCACCACACATCCACGTTATGGTTGAGAAAGTTAAGGAGATGGAGTTGTAACTCCCTCCCTTTAATTAATAATTATATATATATATACACACACTATATGTTATATCAAATATGTAAATCTCTATTATTAACGGCGCTATATAATGAGACTAGTCATTTCGTAGTCTGATCTTATACAAACTCTAGGATACCCCGCTCACATGTCTCCACATGAATGATCAGGATCAGATCATTTGTAGTACTTTACAACACTTGTAACATCTACAATGCAGGTCGTATCCATAGTGTTACCATGATAAGGTACCCAGCCTTATCCATCTACTACAAACCGTTCAGGTTATCATTTAAAAATGATTCACCTATGTATCTCTACATACATGTTTAAATTATATAAAATAATTAAGATCTTAGTTCGTTTGATTGAATGTATACTCATAAAATAACAATTATTTTATTAATAATAATTTTTTTATACAATGTTTACAAACTACGAGAATACAATAGAGATTTCAGGACGATCCCAACACAACTGTCTATAGTCATAATTTTTTCAAGTCTTTTCATTAAAGTTCTTTACCACATTTTTCCATCCAATTTTATTTAAATGACAATTAGACCTGTTCCCATTTAAAGTTTCGCCAACACACTTGTATTAATGTATTAAGAGTGGTATCGTCCCAAATAGCTTTTATGTGCTTATCTTTTTCATCACTAAGAATTATATTTTTAGACATTCTAAAAGAAAAAGGGAGTAAATTCATTCTTCAAACAAAACTTTGACAGGAACAAATATAAAAGAAAAGACAAAAAAAGATACATTTTCCTATATTAGCAACATAATGCAACATGAAATAAACTTAAAAATAATGTGGAAATAAATGGAGGTAGCCAGAGCAATGACACATAATTGGCCAAAGCAATGACAAAAAATTAAACTTAAGAATCAAGCCACGTTATACACTAGCTGATGTGGTTTCCCATATGACACCTAATATTCAAAAGAAAGGACTTGGAAAGTGCTCATAACTTCTAATTTACCTAAAAATCTGCATTAATCAAACCTTTATCAACTTTGAACTCTTATCTGCAAAACATGTGCCAAACAATGGTAGGGTACTATTTTTTCTTGGTATTTTTTTATTTGATATTGTATATCTGCAGGATATTGAATTATTGTTTCTTGGATGGACTACATTTATCAACTCATTTTCTTCCCAATATCTACGTTTCTAATATGATTGGAATCATTGTGTCTAACTACATTCTTTTGTCTTTACCTTATAATGCCATGTTTTTAGTTTCTTTCCAATTGTACGATCTTAAGCAGCAAGGTTTCATAGAGAGACAAGAGGTAAAACTTTGTTCCTTGCCCTGAACTTCTCTACCTGTCATTATTTAATATTTCTGCTTACTTCTTGAAAGTTTGATGAACTTACTTATCGGTTTCGAAACGGATGTTCTCTTTCAACGAGGACATTCCAACACAATTCAACAAGGATAGAGGACCTGAATCGTCTTTGATAAGAATTAGGTAATACCCTTTTGAATTTGATCAATGTTTTAGAGAGGTAGCTTCTAACCATTGAATCTTAGCTTTGGTTAATTTTTTATAGATCCAAAACAGGTGGTCTTCGAGAATATGCTAAAAAGAGACTCATCATTATCTACTTCAATGAAACCAAAATTTTATGCACAAATGCCACCTTTGCACATGCAAACTACCTCAAAAAACCTTTCCCACCTCGTAGAAACCAAAAAATTGAAAGGTGGAAAATTAGTATGCACAAACAGTCATCAAAATTCTAAAACATAGTTCAATTTTAATCCCTCCAATCTAGACAAAATTTCAACAACCCTTCTAACCGAAATCACCCAGAAAAAAGTCAGAGCAACCCCTTTTTTTCTCAAATGGCAATCAAGCTCCCAACTCCGACAGCAAAACTTTAACAAATTATTAAGGAATCACAAAAAAAGCCAATGGAACGAAGAGATTCTTTTGAGACCGAAAAACCAGTAAACGAAGAGATCCTTCCAAGGACTGTTTTCCTCAGCTTTTTCAAATTGTTTCATCTCTAAAGGGCGTGTCAATGATCTTTTGAACGTTTTCTTCACATACCCATTCCTCAAAACTTTACCAACAATCAACCAGAGTCAACCACGCGATTGGATCAAGAATTTCGAAAAGCTACGATCTCTTGAATTGACCAAATTCTAAGGCAAATAGAAGAAACAATAGAAAATTTTGTCAAACACATTCACAACACCAACGAAACCACACATTAAGAACCAAATTCCAGATCAAAATCAACCCTAAACCCTAAAATTCACATAAACATTTTAACAAACATGTTCTAGGTAGCAATCAACAAGTGAGATTTAGTAACTCAAGATTCCAAAAAAAACCCACTCCGATTCTTCCACAAACAACCGGATGCTTTCAATAAAAATAACAGAATAGACCATAAAAAATAACGAAAAACTCAAGACTATTACAAAATCATACAAATAAATACCTGGAATGATGAGGATAGAAGGAAAAGAGACAATGGAAGCTTCTGGAACTACGAGGATGAAGAAGATCGTTGAGAGGCCATCAAAGTTGTTGGACCGGTGAGGATGGAGAGCTTCTTGAGAGGAAGTTGAAGCTGCTGTATGAGGAGGGAGAAAGACCTGAGAGAGATGATAGTTTGATGCTTAAATATAGGGGTATTTTAGGTATTTCAAAAACTACATAAAATAAGGAGAAATTTTGCTGGTGATTCTCGGTTAATCATCTTTTACACAATCACCATCCAACTGATATTTCATAAATCAATTTTTAGTGATTTTAGATTTTTTGAAAATCAATTTTATTAGATTGCCAAACACCATCATTTTATGTAAAATTTATTTTAGCAAGAAAA

Coding sequence (CDS)

ATGCTTTGGAGGGAATTAAGAAAAGAAAAGAGGACTTACCTTGAAGCCAATCTTCTTCGCGTAGTCTCTCGATCCGATCACGAACGTTTCGAACTTCGATCCGAAATCCCAAAATGGGCACCACTACTAGAGAATTTTATGTATTCTGTTGGGATTGAAAATTCAAGCAAAAGTTGCGAGCTTTGCTTGAATTTTAGAAAGGGAGGAAAGGAAGAGAGGAGGGAGAAGAAAACTTGCTTTTCTTCTATGTTTTTCCAGGGAGATGAACCAGAGAGAGTTCTCTGTTTCAAAAAACAGAAATTGTGGAAGAAGAAAACCGAACCACCACACATCCACGTTATGGTTGAGAAAGTTAAGGAGATGGAGTTGTAA

Protein sequence

MLWRELRKEKRTYLEANLLRVVSRSDHERFELRSEIPKWAPLLENFMYSVGIENSSKSCELCLNFRKGGKEERREKKTCFSSMFFQGDEPERVLCFKKQKLWKKKTEPPHIHVMVEKVKEMEL

Homology

The following BLAST results are available for this feature:

BLAST of Bhi12M000301 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi12M000301 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi12M000301 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi12M000301 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi12G000301	Bhi12G000301	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi12M000301.utr5p1	Bhi12M000301.utr5p1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi12M000301.exon1	Bhi12M000301.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi12M000301	cds.Bhi12M000301	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi12M000301.utr3p1	Bhi12M000301.utr3p1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi12M000301	Bhi12M000301-protein	polypeptide