Bhi11M000205 (mRNA) Wax gourd (B227) v1

Overview


Name	Bhi11M000205
Type	mRNA
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	histone deacetylase complex subunit SAP18-like
Location	chr11: 5548333 .. 5551488 (-)
Sequence length	2211
RNA-Seq Expression	Bhi11M000205
Synteny	Bhi11M000205

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAAACCAAAAATGGAAGAATCAGAAGTTTGTAACACTACGACTATGGACAAGAGAAGCAGAGACGAGAAGATGAGCGGAGCTGCAACTGCTCCGTCGCAAGGGAGACCGTCGGGGCGGCCACTTCCTCCGCCCAAAGCTCCGCCACCTCCTCCTCGTCCTCGTTTCGAGCCTGTCGACCGCGAAAAGGTTTCTCTTAGGGCTTGCTGCTTCCGCTCCTATTTTTATTTTCATCACTCAGATAAGTTTATGGTTTCTGAAATCTTGGGTTCGTTAATTCAACTGACGTTTCTCTTCGTTTCGTTTTTTGCAAATTTTCTTTTCCTCTGTGGTGATCTCAAGACTTGCCCTTTGTTGCTTCGCGTTTTCACTAAGGTACATTTGAATTCATCGAGAAGCATGCTTGTCTGATTTAATCATCGTTCTTTTGGAATTTGAGAGAATAGGTATCTGTTTTCCATTATTGACTTGCCAGTACCTTTGATGATACCTCGTCTTGAATCAGTATGGCAGTTTCTTTTGTTGTGTGAAGATTGTGTTGAAGTTTTTCTTGTTGTCCACATGTTTTTCTTTTCTGATTGGTGCACTTGGGAAGTATATTGAGAAAAATTTGCTTCATAATGTATTTTCATCTTACTGCAGACATTATTATACAAAATATGCTTCATTTACATTTTTTTGCAGGTTGGAGGTCATCACACTGATGATGATTTTGCAATTAGAGGTAAGGAACCCAAAGATGAGGTTCAGATTTATACATGGAAAGATGCAACACTTCGGGAGCTGACCGATCTAGTATGCTGAAAACCTACATTCATCCGTTTCTTCTCTAGTGTTTTTCTATCTATTTTTGCTGCTGCTGTTCTGTATTTGACAAATGACCATCTAATTTTAGGTTAAGGAGGTTGCTCCAGAGGCAAGAAGAAGAAATGCCAAACTTTCTTTTGCTTTTGTTTATCCCGATAAGCGCGGTCGATTTGTTTTGAAACAGGTTAGTGAATGTTAACATAAACATCACCTGCAACTGCAATGGAATTTAAATTATTCTCATTTACAATTGTACTAAATGTTTAGCAGTTTACTTATTAAATGCGCTACTTGTTTGGATAAATTGTTTTCATTTTCTTAATATGAAAATGATATACTCGTTTTAAGGTGGGGATGACACATTCTTATGGAAATGGGAGGAGGTTAGACGATAGCAAGGCATTGGGTGAATTGGACTTCCAGGTAAATTTAGGGTTCATGAACTAAGTTATTTGAAAGTTTATGAGGATAAACTGATATATCTTCTCATGTGTTTTTAACTTTAAAAATGTAGATTGGAGACTATCTGGACGTGGCAATCCTATAGAAATCTTGGTTATGTTGAAGGATGCTATTATTTAGTTGAAGAGTGAGAGTTATTTGTTTGCTGCCTTAGAAGATTGGATTTGGCGTCATTTGTAGTATCGATTCTGTTCTGCATTTTTTATGTTCTATATTTAGATGTCATGTGAGGTAGAAGAACAGATTGTATTGATTGTGAATTTTTATAACCTCCTCTTATATTTAATAACCTCCTCTTATATTTCCCCAGATATTGTATTGTTAGATCTCTATGTATATTAGAAACTCTATTTCTCAAAGGAAATACTTTTCCATTCTGTTCAACTGCAAAGTTTAGTTTTGAAATATTCAACTAGATTGATGATTTACGTACATGAATTATGTTTTATTGGATGGCATTCTGAAACTTCATCACACCCTTCTCTAGGTATCGTTTATACATGATGAGTATTCACAAATTTGTACATCAAGATACAATGTTGTACAACAGTTGAAGAATCCACTCTCTACAAGGCAGGGTTTTAAATATCTTAAAATCCTTAGTATCCAACCATGGAGAATTCTTGTAACTGCCTAATGATATCCTTTGGTCTTGTTTCTCCTGGAATTGCAGCTAACAAATCCTGGATTTTTGTCAACAGATATTAAGTAAGTAGCATGAGATGGGGTTTGAGATAAGGGGCATGAGTTCTCAAATGTCGAACTGAGTTGGAAAGTGGGATGAACTTTGGTTCCTTAGAAATTAATGTTCAGTAGATGCATGTTAAAAGACAATTCCTCAGGGGATTGAAGATGATCTCAAAGTGTACCTCTCACTTAGGCGTTGCTTCCTTCTGGTAACGTAATCAGGCGTGTTTTTGAGTTGTAAACCAGCTCGGTTCCACAGCTGAGGAAAATATTTAGTTTTTACATTGAGAAGTTATAAGATGAGCAGCTGGATGATGGATCTACTAATTGAGAAAAGAAGATCATAGGTATGTTGATACTAATGGTTGCAAATTTATGAGATTCGTACTTACTTCGAGCACTTGAGATTGTTTGTGCTGCCACCACTCGAAACTGACAGTATGGTGCCAAAGAAGGAAACGTTCTCAGTTCCACAGTTTGGACAAGGTCCCTAAATAAGATTCTTCTTCAGTCAGGATTGCTCCATAGGCCATTTCAAGGTGTAAATTGGCAAAAAAACTGGTGACAAAGAACTCTACCTTCAAGATCAAAGAGTCTCTAACAACTGCATTTGTGAGGGTAAGAGCTAACCAAACCAGAAATGGCACAGCGGCAAACCAAGTAAAGATGAAACTGAATGGCTCTGGAAGCTGCATACACAACTCAGTGTGAACAAATTCCAAGTTATAAGAGCATAAAGTAAGAAGTTATTATGTCTCATGAGAGTTTAGAATTAAACAAATGGTGCAATGTTTGGTGGAAGCTCTCTGCTACCTTATTCTTTACCTATAGAGCTTTCTCTTGAAAAAGAATTGATTGACAATTCATATGCCAATAAAAAGAGAGATCATTGTAGTCACTGCTGTCGCTTGCTAAAAACTAGCTCTATAAAGCTTAAAAAGGGTTTTGTTCCTTGTGTGACAGGAATTATGTAGTTTCGAAGATGCTGATAGGATTATTTTAGAGGATGCAATTGATTAGAGAAATATCTTGTTTATTTTCAAAACTTGGTTAAGGAAAAGTCAGGGTAAGAGCTTGAGAATTGGAGAGTTAAAAGGAAGGGGTAGCAAAATTATTAATTTGAGATGTCATATCGACAGAATTAGAAATAAGGCTTCGCGCCATAATGAAAGAAGATGAAAATTTACCTCCAACAAG

mRNA sequence

ATGGCTAAACCAAAAATGGAAGAATCAGAAGTTTGTAACACTACGACTATGGACAAGAGAAGCAGAGACGAGAAGATGAGCGGAGCTGCAACTGCTCCGTCGCAAGGGAGACCGTCGGGGCGGCCACTTCCTCCGCCCAAAGCTCCGCCACCTCCTCCTCGTCCTCGTTTCGAGCCTGTCGACCGCGAAAAGACTTGCCCTTTGTTGCTTCGCGTTTTCACTAAGGTTGGAGGTCATCACACTGATGATGATTTTGCAATTAGAGGTAAGGAACCCAAAGATGAGGTTCAGATTTATACATGGAAAGATGCAACACTTCGGGAGCTGACCGATCTAGTTAAGGAGGTTGCTCCAGAGGCAAGAAGAAGAAATGCCAAACTTTCTTTTGCTTTTGTTTATCCCGATAAGCGCGGTCGATTTGTTTTGAAACAGGTGGGGATGACACATTCTTATGGAAATGGGAGGAGGTTAGACGATAGCAAGGCATTGGGTGAATTGGACTTCCAGATTGGAGACTATCTGGACGTGGCAATCCTATAGAAATCTTGGTTATGTTGAAGGATGCTATTATTTAGTTGAAGAGTGAGAGTTATTTGTTTGCTGCCTTAGAAGATTGGATTTGGCGTCATTTGTAGTATCGATTCTGTTCTGCATTTTTTATGTTCTATATTTAGATGTCATGTGAGGTAGAAGAACAGATTGTATTGATTGTGAATTTTTATAACCTCCTCTTATATTTAATAACCTCCTCTTATATTTCCCCAGATATTGTATTGTTAGATCTCTATGTATATTAGAAACTCTATTTCTCAAAGGAAATACTTTTCCATTCTGTTCAACTGCAAAGTTTAGTTTTGAAATATTCAACTAGATTGATGATTTACGTACATGAATTATGTTTTATTGGATGGCATTCTGAAACTTCATCACACCCTTCTCTAGGTATCGTTTATACATGATGAGTATTCACAAATTTGTACATCAAGATACAATGTTGTACAACAGTTGAAGAATCCACTCTCTACAAGATATTAAGTAAGTAGCATGAGATGGGGTTTGAGATAAGGGGCATGAGTTCTCAAATGTCGAACTGAGTTGGAAAGTGGGATGAACTTTGGTTCCTTAGAAATTAATGTTCAGTAGATGCATGTTAAAAGACAATTCCTCAGGGGATTGAAGATGATCTCAAAGTGTACCTCTCACTTAGGCGTTGCTTCCTTCTGGTAACGTAATCAGGCGTGTTTTTGAGTTGTAAACCAGCTCGGTTCCACAGCTGAGGAAAATATTTAGTTTTTACATTGAGAAGTTATAAGATGAGCAGCTGGATGATGGATCTACTAATTGAGAAAAGAAGATCATAGGTATGTTGATACTAATGGTTGCAAATTTATGAGATTCGTACTTACTTCGAGCACTTGAGATTGTTTGTGCTGCCACCACTCGAAACTGACAGTATGGTGCCAAAGAAGGAAACGTTCTCAGTTCCACAGTTTGGACAAGGTCCCTAAATAAGATTCTTCTTCAGTCAGGATTGCTCCATAGGCCATTTCAAGGTGTAAATTGGCAAAAAAACTGGTGACAAAGAACTCTACCTTCAAGATCAAAGAGTCTCTAACAACTGCATTTGTGAGGGTAAGAGCTAACCAAACCAGAAATGGCACAGCGGCAAACCAAGTAAAGATGAAACTGAATGGCTCTGGAAGCTGCATACACAACTCAGTGTGAACAAATTCCAAGTTATAAGAGCATAAAGTAAGAAGTTATTATGTCTCATGAGAGTTTAGAATTAAACAAATGGTGCAATGTTTGGTGGAAGCTCTCTGCTACCTTATTCTTTACCTATAGAGCTTTCTCTTGAAAAAGAATTGATTGACAATTCATATGCCAATAAAAAGAGAGATCATTGTAGTCACTGCTGTCGCTTGCTAAAAACTAGCTCTATAAAGCTTAAAAAGGGTTTTGTTCCTTGTGTGACAGGAATTATGTAGTTTCGAAGATGCTGATAGGATTATTTTAGAGGATGCAATTGATTAGAGAAATATCTTGTTTATTTTCAAAACTTGGTTAAGGAAAAGTCAGGGTAAGAGCTTGAGAATTGGAGAGTTAAAAGGAAGGGGTAGCAAAATTATTAATTTGAGATGTCATATCGACAGAATTAGAAATAAGGCTTCGCGCCATAATGAAAGAAGATGAAAATTTACCTCCAACAAG

Coding sequence (CDS)

ATGGCTAAACCAAAAATGGAAGAATCAGAAGTTTGTAACACTACGACTATGGACAAGAGAAGCAGAGACGAGAAGATGAGCGGAGCTGCAACTGCTCCGTCGCAAGGGAGACCGTCGGGGCGGCCACTTCCTCCGCCCAAAGCTCCGCCACCTCCTCCTCGTCCTCGTTTCGAGCCTGTCGACCGCGAAAAGACTTGCCCTTTGTTGCTTCGCGTTTTCACTAAGGTTGGAGGTCATCACACTGATGATGATTTTGCAATTAGAGGTAAGGAACCCAAAGATGAGGTTCAGATTTATACATGGAAAGATGCAACACTTCGGGAGCTGACCGATCTAGTTAAGGAGGTTGCTCCAGAGGCAAGAAGAAGAAATGCCAAACTTTCTTTTGCTTTTGTTTATCCCGATAAGCGCGGTCGATTTGTTTTGAAACAGGTGGGGATGACACATTCTTATGGAAATGGGAGGAGGTTAGACGATAGCAAGGCATTGGGTGAATTGGACTTCCAGATTGGAGACTATCTGGACGTGGCAATCCTATAG

Protein sequence

MAKPKMEESEVCNTTTMDKRSRDEKMSGAATAPSQGRPSGRPLPPPKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDDDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

Homology

[Close]

BLAST of Bhi11M000205 vs. TAIR 10
Match: AT2G45640.1 (SIN3 associated polypeptide P18 )

HSP 1 Score: 201.8 bits (512), Expect = 4.5e-52
Identity = 105/152 (69.08%), Postives = 122/152 (80.26%), Query Frame = 0


Query: 29  AATAPSQGRPSGRPLPPPK--APPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDDDFA 88
           A  A  QG   GRPLPPP       PPRP+ EPVDREKTCPLLLRVFTK GGHHT +D+A
Sbjct: 2   AEAARRQG--GGRPLPPPPRGVNQQPPRPKPEPVDREKTCPLLLRVFTKSGGHHTSEDYA 61

Query: 89  IRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVG 148
           +RGKEPKDEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LSFAFVYP+ +G + +++VG
Sbjct: 62  VRGKEPKDEVQIYTWKDASLRELTDLVKEVSVAARRRNARLSFAFVYPNNKGGYNVREVG 121

Query: 149 MTHSYGNGRRLDDSKALGELDFQIGDYLDVAI 179
            T +Y N ++ DDSK L EL F+IGDYLDVAI
Sbjct: 122 ETMAYPNRKQPDDSKTLSELPFEIGDYLDVAI 151

[Close]

BLAST of Bhi11M000205 vs. TAIR 10
Match: AT2G45640.2 (SIN3 associated polypeptide P18 )

HSP 1 Score: 195.7 bits (496), Expect = 3.3e-50
Identity = 105/152 (69.08%), Postives = 119/152 (78.29%), Query Frame = 0


Query: 29  AATAPSQGRPSGRPLPPPK--APPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDDDFA 88
           A  A  QG   GRPLPPP       PPRP+ EPVDREKTCPLLLRVFTK GGHHT +D+A
Sbjct: 2   AEAARRQG--GGRPLPPPPRGVNQQPPRPKPEPVDREKTCPLLLRVFTKSGGHHTSEDYA 61

Query: 89  IRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVG 148
           +RGKEPKDEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LSFAFVYP+ +G +    VG
Sbjct: 62  VRGKEPKDEVQIYTWKDASLRELTDLVKEVSVAARRRNARLSFAFVYPNNKGGY---NVG 121

Query: 149 MTHSYGNGRRLDDSKALGELDFQIGDYLDVAI 179
            T +Y N ++ DDSK L EL F+IGDYLDVAI
Sbjct: 122 ETMAYPNRKQPDDSKTLSELPFEIGDYLDVAI 148

[Close]

BLAST of Bhi11M000205 vs. ExPASy Swiss-Prot
Match: O64644 (Histone deacetylase complex subunit SAP18 OS=Arabidopsis thaliana OX=3702 GN=At2g45640 PE=1 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 6.4e-51
Identity = 105/152 (69.08%), Postives = 122/152 (80.26%), Query Frame = 0


Query: 29  AATAPSQGRPSGRPLPPPK--APPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDDDFA 88
           A  A  QG   GRPLPPP       PPRP+ EPVDREKTCPLLLRVFTK GGHHT +D+A
Sbjct: 2   AEAARRQG--GGRPLPPPPRGVNQQPPRPKPEPVDREKTCPLLLRVFTKSGGHHTSEDYA 61

Query: 89  IRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVG 148
           +RGKEPKDEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LSFAFVYP+ +G + +++VG
Sbjct: 62  VRGKEPKDEVQIYTWKDASLRELTDLVKEVSVAARRRNARLSFAFVYPNNKGGYNVREVG 121

Query: 149 MTHSYGNGRRLDDSKALGELDFQIGDYLDVAI 179
            T +Y N ++ DDSK L EL F+IGDYLDVAI
Sbjct: 122 ETMAYPNRKQPDDSKTLSELPFEIGDYLDVAI 151

[Close]

BLAST of Bhi11M000205 vs. ExPASy Swiss-Prot
Match: Q3T022 (Histone deacetylase complex subunit SAP18 OS=Bos taurus OX=9913 GN=SAP18 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.0e-29
Identity = 70/123 (56.91%), Postives = 85/123 (69.11%), Query Frame = 0


Query: 58  EPVDREKTCPLLLRVFTKVGG-HHTDDDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEV 117
           +P+DREKTCPLLLRVFT   G HH  D+F+ RG  P  E+QIYTW DATL+ELT LVKEV
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFS-RGNVPSSELQIYTWMDATLKELTSLVKEV 77

Query: 118 APEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLD 177
            PEAR++    +FA V+ D KR  + +K++G T S   G   DDS  L    FQIGDYLD
Sbjct: 78  YPEARKKGTHFNFAIVFTDLKRPGYRVKEIGSTMSGRKG--TDDSMTLQSQKFQIGDYLD 137

Query: 178 VAI 179
           +AI
Sbjct: 138 IAI 137

[Close]

BLAST of Bhi11M000205 vs. ExPASy Swiss-Prot
Match: O00422 (Histone deacetylase complex subunit SAP18 OS=Homo sapiens OX=9606 GN=SAP18 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.0e-29
Identity = 70/123 (56.91%), Postives = 85/123 (69.11%), Query Frame = 0


Query: 58  EPVDREKTCPLLLRVFTKVGG-HHTDDDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEV 117
           +P+DREKTCPLLLRVFT   G HH  D+F+ RG  P  E+QIYTW DATL+ELT LVKEV
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFS-RGNVPSSELQIYTWMDATLKELTSLVKEV 77

Query: 118 APEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLD 177
            PEAR++    +FA V+ D KR  + +K++G T S   G   DDS  L    FQIGDYLD
Sbjct: 78  YPEARKKGTHFNFAIVFTDVKRPGYRVKEIGSTMSGRKG--TDDSMTLQSQKFQIGDYLD 137

Query: 178 VAI 179
           +AI
Sbjct: 138 IAI 137

[Close]

BLAST of Bhi11M000205 vs. ExPASy Swiss-Prot
Match: Q5RDT5 (Histone deacetylase complex subunit SAP18 OS=Pongo abelii OX=9601 GN=SAP18 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.0e-29
Identity = 70/123 (56.91%), Postives = 85/123 (69.11%), Query Frame = 0


Query: 58  EPVDREKTCPLLLRVFTKVGG-HHTDDDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEV 117
           +P+DREKTCPLLLRVFT   G HH  D+F+ RG  P  E+QIYTW DATL+ELT LVKEV
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFS-RGNVPSSELQIYTWMDATLKELTSLVKEV 77

Query: 118 APEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLD 177
            PEAR++    +FA V+ D KR  + +K++G T S   G   DDS  L    FQIGDYLD
Sbjct: 78  YPEARKKGTHFNFAIVFTDVKRPGYRVKEIGSTMSGRKG--TDDSMTLQSQKFQIGDYLD 137

Query: 178 VAI 179
           +AI
Sbjct: 138 IAI 137

[Close]

BLAST of Bhi11M000205 vs. ExPASy Swiss-Prot
Match: O55128 (Histone deacetylase complex subunit SAP18 OS=Mus musculus OX=10090 GN=Sap18 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 5.3e-29
Identity = 70/123 (56.91%), Postives = 85/123 (69.11%), Query Frame = 0


Query: 58  EPVDREKTCPLLLRVFTKVGG-HHTDDDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEV 117
           +P+DREKTCPLLLRVFT   G HH  D+F+ RG  P  E+QIYTW DATL+ELT LVKEV
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFS-RGNVPSSELQIYTWMDATLKELTSLVKEV 77

Query: 118 APEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLD 177
            PEAR++    +FA V+ D KR  + +K++G T S   G   DDS  L    FQIGDYLD
Sbjct: 78  YPEARKKGTHFNFAIVFMDLKRPGYRVKEIGSTMSGRKG--TDDSMTLQSQKFQIGDYLD 137

Query: 178 VAI 179
           +AI
Sbjct: 138 IAI 137

[Close]

BLAST of Bhi11M000205 vs. NCBI nr
Match: XP_038905116.1 (histone deacetylase complex subunit SAP18-like [Benincasa hispida])

HSP 1 Score: 357.8 bits (917), Expect = 5.3e-95
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MAKPKMEESEVCNTTTMDKRSRDEKMSGAATAPSQGRPSGRPLPPPKAPPPPPRPRFEPV 60
           MAKPKMEESEVCNTTTMDKRSRDEKMSGAATAPSQGRPSGRPLPPPKAPPPPPRPRFEPV
Sbjct: 1   MAKPKMEESEVCNTTTMDKRSRDEKMSGAATAPSQGRPSGRPLPPPKAPPPPPRPRFEPV 60

Query: 61  DREKTCPLLLRVFTKVGGHHTDDDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEA 120
           DREKTCPLLLRVFTKVGGHHTDDDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEA
Sbjct: 61  DREKTCPLLLRVFTKVGGHHTDDDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEA 120

Query: 121 RRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 180
           RRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Sbjct: 121 RRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 179

[Close]

BLAST of Bhi11M000205 vs. NCBI nr
Match: XP_022152730.1 (histone deacetylase complex subunit SAP18-like [Momordica charantia])

HSP 1 Score: 315.1 bits (806), Expect = 3.9e-82
Identity = 159/166 (95.78%), Postives = 161/166 (96.99%), Query Frame = 0


Query: 17  MDKRSRDEKMSGAATAPSQGRPSGRPLPP---PKAPPPPPRPRFEPVDREKTCPLLLRVF 76
           MDKRSRDEKMSGAATAP QGRPS RPLPP   PKAPPPPPRPRFEPVDREKTCPLLLRVF
Sbjct: 1   MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQPKAPPPPPRPRFEPVDREKTCPLLLRVF 60

Query: 77  TKVGGHHTDDDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 136
           TKVGGHH+D+DFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY
Sbjct: 61  TKVGGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 120

Query: 137 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 180
           PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Sbjct: 121 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 166

[Close]

BLAST of Bhi11M000205 vs. NCBI nr
Match: XP_004147963.1 (histone deacetylase complex subunit SAP18 [Cucumis sativus] >KGN55941.1 hypothetical protein Csa_009634 [Cucumis sativus])

HSP 1 Score: 313.5 bits (802), Expect = 1.1e-81
Identity = 158/166 (95.18%), Postives = 161/166 (96.99%), Query Frame = 0


Query: 17  MDKRSRDEKMSGAATAPSQGRPSGRPLPPP---KAPPPPPRPRFEPVDREKTCPLLLRVF 76
           MDKRSRDEK SGAATAP+QGRPSGRPLPPP   KAPPP PRPRFEPVDREKTCPLLLRVF
Sbjct: 1   MDKRSRDEKTSGAATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVF 60

Query: 77  TKVGGHHTDDDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 136
           TKVGGHHTD+DFA+RGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY
Sbjct: 61  TKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 120

Query: 137 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 180
           PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Sbjct: 121 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 166

[Close]

BLAST of Bhi11M000205 vs. NCBI nr
Match: XP_008448944.1 (PREDICTED: histone deacetylase complex subunit SAP18-like [Cucumis melo] >TYK19452.1 histone deacetylase complex subunit SAP18-like [Cucumis melo var. makuwa])

HSP 1 Score: 312.0 bits (798), Expect = 3.3e-81
Identity = 158/166 (95.18%), Postives = 160/166 (96.39%), Query Frame = 0


Query: 17  MDKRSRDEKMSGAATAPSQGRPSGRPLPPP---KAPPPPPRPRFEPVDREKTCPLLLRVF 76
           MDKRSRDEK SGAA AP+QGRPSGRPLPPP   KAPPP PRPRFEPVDREKTCPLLLRVF
Sbjct: 1   MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVF 60

Query: 77  TKVGGHHTDDDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 136
           TKVGGHHTD+DFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY
Sbjct: 61  TKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 120

Query: 137 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 180
           PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Sbjct: 121 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 166

[Close]

BLAST of Bhi11M000205 vs. NCBI nr
Match: KAG6596815.1 (Histone deacetylase complex subunit SAP18, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 311.6 bits (797), Expect = 4.4e-81
Identity = 162/183 (88.52%), Postives = 167/183 (91.26%), Query Frame = 0


Query: 1   MAKPKM-EESEVCNTTTMDKRSRDEKMSGAATAPSQGRPSGRPLPPP---KAPPPPPRPR 60
           MAKPK  +  ++ NT TMDKRSRDEKMSGAATAP QGRPS RPLPPP   KAPPPPPR R
Sbjct: 1   MAKPKNGKNQKLSNTPTMDKRSRDEKMSGAATAPPQGRPSARPLPPPSQAKAPPPPPRAR 60

Query: 61  FEPVDREKTCPLLLRVFTKVGGHHTDDDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEV 120
           FEPVDREKTCPLLLRVFTKVG HHTD+DFAIRGKEPKDEVQIYTWKDATLRELTDLVKEV
Sbjct: 61  FEPVDREKTCPLLLRVFTKVGSHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEV 120

Query: 121 APEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDV 180
           APEARRRNAKLSFAFVYPDKRGRFVLK VG THSYGNGRRLD SKALGELDFQIGDYLDV
Sbjct: 121 APEARRRNAKLSFAFVYPDKRGRFVLKLVGTTHSYGNGRRLDGSKALGELDFQIGDYLDV 180

[Close]

BLAST of Bhi11M000205 vs. ExPASy TrEMBL
Match: A0A6J1DES5 (histone deacetylase complex subunit SAP18-like OS=Momordica charantia OX=3673 GN=LOC111020386 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.9e-82
Identity = 159/166 (95.78%), Postives = 161/166 (96.99%), Query Frame = 0


Query: 17  MDKRSRDEKMSGAATAPSQGRPSGRPLPP---PKAPPPPPRPRFEPVDREKTCPLLLRVF 76
           MDKRSRDEKMSGAATAP QGRPS RPLPP   PKAPPPPPRPRFEPVDREKTCPLLLRVF
Sbjct: 1   MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQPKAPPPPPRPRFEPVDREKTCPLLLRVF 60

Query: 77  TKVGGHHTDDDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 136
           TKVGGHH+D+DFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY
Sbjct: 61  TKVGGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 120

Query: 137 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 180
           PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Sbjct: 121 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 166

[Close]

BLAST of Bhi11M000205 vs. ExPASy TrEMBL
Match: A0A0A0L751 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G038150 PE=3 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 5.6e-82
Identity = 158/166 (95.18%), Postives = 161/166 (96.99%), Query Frame = 0


Query: 17  MDKRSRDEKMSGAATAPSQGRPSGRPLPPP---KAPPPPPRPRFEPVDREKTCPLLLRVF 76
           MDKRSRDEK SGAATAP+QGRPSGRPLPPP   KAPPP PRPRFEPVDREKTCPLLLRVF
Sbjct: 1   MDKRSRDEKTSGAATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVF 60

Query: 77  TKVGGHHTDDDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 136
           TKVGGHHTD+DFA+RGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY
Sbjct: 61  TKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 120

Query: 137 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 180
           PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Sbjct: 121 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 166

[Close]

BLAST of Bhi11M000205 vs. ExPASy TrEMBL
Match: A0A5D3D7E1 (Histone deacetylase complex subunit SAP18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001050 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.6e-81
Identity = 158/166 (95.18%), Postives = 160/166 (96.39%), Query Frame = 0


Query: 17  MDKRSRDEKMSGAATAPSQGRPSGRPLPPP---KAPPPPPRPRFEPVDREKTCPLLLRVF 76
           MDKRSRDEK SGAA AP+QGRPSGRPLPPP   KAPPP PRPRFEPVDREKTCPLLLRVF
Sbjct: 1   MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVF 60

Query: 77  TKVGGHHTDDDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 136
           TKVGGHHTD+DFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY
Sbjct: 61  TKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 120

Query: 137 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 180
           PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Sbjct: 121 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 166

[Close]

BLAST of Bhi11M000205 vs. ExPASy TrEMBL
Match: A0A1S3BLT9 (histone deacetylase complex subunit SAP18-like OS=Cucumis melo OX=3656 GN=LOC103490959 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.6e-81
Identity = 158/166 (95.18%), Postives = 160/166 (96.39%), Query Frame = 0


Query: 17  MDKRSRDEKMSGAATAPSQGRPSGRPLPPP---KAPPPPPRPRFEPVDREKTCPLLLRVF 76
           MDKRSRDEK SGAA AP+QGRPSGRPLPPP   KAPPP PRPRFEPVDREKTCPLLLRVF
Sbjct: 1   MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVF 60

Query: 77  TKVGGHHTDDDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 136
           TKVGGHHTD+DFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY
Sbjct: 61  TKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 120

Query: 137 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 180
           PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Sbjct: 121 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 166

[Close]

BLAST of Bhi11M000205 vs. ExPASy TrEMBL
Match: A0A6J1KTJ0 (histone deacetylase complex subunit SAP18-like OS=Cucurbita maxima OX=3661 GN=LOC111498523 PE=3 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 7.5e-79
Identity = 154/166 (92.77%), Postives = 156/166 (93.98%), Query Frame = 0


Query: 17  MDKRSRDEKMSGAATAPSQGRPSGRPLPPP---KAPPPPPRPRFEPVDREKTCPLLLRVF 76
           MDKRSRDEKMSGAATAP QGRPS RPLPPP   KAPPPPPR RFEPVDREKTCPLLLRVF
Sbjct: 1   MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQAKAPPPPPRARFEPVDREKTCPLLLRVF 60

Query: 77  TKVGGHHTDDDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 136
           TKVG HHTD+DFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY
Sbjct: 61  TKVGSHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 120

Query: 137 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 180
           PDKRGRFVLK VG THSYGNGRRLD SKALGELDFQIGDYLDVAI+
Sbjct: 121 PDKRGRFVLKPVGTTHSYGNGRRLDGSKALGELDFQIGDYLDVAIM 166

The following BLAST results are available for this feature:

BLAST of Bhi11M000205 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45640.1	4.5e-52	69.08	SIN3 associated polypeptide P18	[more]
AT2G45640.2	3.3e-50	69.08	SIN3 associated polypeptide P18	[more]

BLAST of Bhi11M000205 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64644	6.4e-51	69.08	Histone deacetylase complex subunit SAP18 OS=Arabidopsis thaliana OX=3702 GN=At2...	[more]
Q3T022	4.0e-29	56.91	Histone deacetylase complex subunit SAP18 OS=Bos taurus OX=9913 GN=SAP18 PE=2 SV...	[more]
O00422	4.0e-29	56.91	Histone deacetylase complex subunit SAP18 OS=Homo sapiens OX=9606 GN=SAP18 PE=1 ...	[more]
Q5RDT5	4.0e-29	56.91	Histone deacetylase complex subunit SAP18 OS=Pongo abelii OX=9601 GN=SAP18 PE=2 ...	[more]
O55128	5.3e-29	56.91	Histone deacetylase complex subunit SAP18 OS=Mus musculus OX=10090 GN=Sap18 PE=1...	[more]

BLAST of Bhi11M000205 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905116.1	5.3e-95	100.00	histone deacetylase complex subunit SAP18-like [Benincasa hispida]	[more]
XP_022152730.1	3.9e-82	95.78	histone deacetylase complex subunit SAP18-like [Momordica charantia]	[more]
XP_004147963.1	1.1e-81	95.18	histone deacetylase complex subunit SAP18 [Cucumis sativus] >KGN55941.1 hypothet...	[more]
XP_008448944.1	3.3e-81	95.18	PREDICTED: histone deacetylase complex subunit SAP18-like [Cucumis melo] >TYK194...	[more]
KAG6596815.1	4.4e-81	88.52	Histone deacetylase complex subunit SAP18, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of Bhi11M000205 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DES5	1.9e-82	95.78	histone deacetylase complex subunit SAP18-like OS=Momordica charantia OX=3673 GN...	[more]
A0A0A0L751	5.6e-82	95.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G038150 PE=3 SV=1	[more]
A0A5D3D7E1	1.6e-81	95.18	Histone deacetylase complex subunit SAP18-like OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BLT9	1.6e-81	95.18	histone deacetylase complex subunit SAP18-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1KTJ0	7.5e-79	92.77	histone deacetylase complex subunit SAP18-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR042534	Sin3 associated polypeptide p18 superfamily	GENE3D	3.10.20.550	ASAP complex, SAP18 subunit	coord: 53..179 e-value: 2.7E-46 score: 158.7
IPR010516	Sin3 associated polypeptide p18	PFAM	PF06487	SAP18	coord: 59..178 e-value: 1.1E-38 score: 132.6
IPR010516	Sin3 associated polypeptide p18	PANTHER	PTHR13082	SAP18	coord: 30..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..55
None	No IPR available	PANTHER	PTHR13082:SF4	DEACETYLASE COMPLEX SUBUNIT SAP18, PUTATIVE-RELATED	coord: 30..179

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi11G000205	Bhi11G000205	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi11M000205.exon7	Bhi11M000205.exon7	exon
Bhi11M000205.exon6	Bhi11M000205.exon6	exon
Bhi11M000205.exon5	Bhi11M000205.exon5	exon
Bhi11M000205.exon4	Bhi11M000205.exon4	exon
Bhi11M000205.exon3	Bhi11M000205.exon3	exon
Bhi11M000205.exon2	Bhi11M000205.exon2	exon
Bhi11M000205.exon1	Bhi11M000205.exon1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi11M000205.utr3p2	Bhi11M000205.utr3p2	three_prime_UTR
Bhi11M000205.utr3p1	Bhi11M000205.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi11M000205	cds.Bhi11M000205_6	CDS
cds.Bhi11M000205	cds.Bhi11M000205_5	CDS
cds.Bhi11M000205	cds.Bhi11M000205_4	CDS
cds.Bhi11M000205	cds.Bhi11M000205_3	CDS
cds.Bhi11M000205	cds.Bhi11M000205_2	CDS
cds.Bhi11M000205	cds.Bhi11M000205	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi11M000205	Bhi11M000205-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003714	transcription corepressor activity