Bhi11M000144 (mRNA) Wax gourd (B227) v1

Overview
NameBhi11M000144
TypemRNA
OrganismBenincasa hispida (Wax gourd (B227) v1)
Descriptionglycine-rich cell wall structural protein 1.8-like
Locationchr11: 3701996 .. 3703250 (-)
Sequence length1255
RNA-Seq ExpressionBhi11M000144
SyntenyBhi11M000144
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTAAAGTTTACTAAAATCTAGCAAAATGGTAGTGCAAGTGGAAGATGGGATCCAAAGGCAGGTATTGATGTGATTCTAGTTCCAATTATAATCTTACTTTTGAGGTTAATGACATAGGCAAAAGCACACTGTAGTGCTTGCCTCTTGAACCTTGTTTGAGCTGCATATCCAAAATTAATAATTTTTTTTGCATCTGCCCCTCCTTAATAACCACTAAGCTAGCACACTATAGAGAAGCTAAGGCATCCTCGTTTTCTATATAAGGTGATGGATGGATGCATTCTAGGCATTCCTATCCATTTGGCTATGGCTATCCCTAGAGTTTTGTGCTTTGGCTTACTTCTCTTTGTGAGTTTAGGCTTAGCTTCGGCTGCCAGAATTCTTCTTGATTATGATCCACGTACTCGTCATTACGATTATGATCGTCCTAGTCCAAGAGTAGGGTACGATCCTAGCCATCGTGATGGATCCTATGATAATTCATATGGTGGAGGCTCCAATAGAGGATATGGAATTGGAGACTCTGCTCTTGGAGGTTCCGGACGATACGAAGGTGGTGGAGAACATAATCCTAGATATAGAGATGGAAATGATGATCGTGGGGTTGGATATGGTAATGGTGGTGGATATGGAGGTGTAGGAGGACATGGTGATGGTTATGGTAGCAATGGCGGTGGAGGCTATCGTTATGGCCCTTCCCTTGGAGGTTCAGGATATGGAAATGGCAATGGATATGACCAACGAAGAGATCATGGAGTGGGTTATGGAAGTAAAGGAGGTCCTGAGTCTAGCAATGCCTATGGAGATTCACGTGGATATGGAGCACGTGACAATGGCTATGGAGACTCACGTGGGTACGGAGCACGTGACAATGGGTATGGGAGTGGTGGAGGAGTTGGCGGTGGCTATGGAGTAGGAGGCCATGGTGGTAGTAGTGGAAGTGGTGGTTATGGTAATGGAGGAGTGCATGGAGGAGAATATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGTTATGATGGTGGATATGCACTCAAAAACTCCATCTCAAATAAGAATTGAGAATCCCTTTTATAAGTAATGAACCCAATATTCTTATTATGTCAACAAAAATAAAAACATTGGGTAAGAGATCGAGAATTGATGTTGTTTTCTAAATATATGTTGAAGTTGCTTTTAATGAATGTCAAATTCGAAACAACGATTCAAAGTTAAATTTGAATTACGTAAGTGTATCGTGACAAATTGATTGGAC

mRNA sequence

GTAAAGTTTACTAAAATCTAGCAAAATGGTAGTGCAAGTGGAAGATGGGATCCAAAGGCAGGTATTGATGTGATTCTAGTTCCAATTATAATCTTACTTTTGAGGTTAATGACATAGGCAAAAGCACACTGTAGTGCTTGCCTCTTGAACCTTGTTTGAGCTGCATATCCAAAATTAATAATTTTTTTTGCATCTGCCCCTCCTTAATAACCACTAAGCTAGCACACTATAGAGAAGCTAAGGCATCCTCGTTTTCTATATAAGGTGATGGATGGATGCATTCTAGGCATTCCTATCCATTTGGCTATGGCTATCCCTAGAGTTTTGTGCTTTGGCTTACTTCTCTTTGTGAGTTTAGGCTTAGCTTCGGCTGCCAGAATTCTTCTTGATTATGATCCACGTACTCGTCATTACGATTATGATCGTCCTAGTCCAAGAGTAGGGTACGATCCTAGCCATCGTGATGGATCCTATGATAATTCATATGGTGGAGGCTCCAATAGAGGATATGGAATTGGAGACTCTGCTCTTGGAGGTTCCGGACGATACGAAGGTGGTGGAGAACATAATCCTAGATATAGAGATGGAAATGATGATCGTGGGGTTGGATATGGTAATGGTGGTGGATATGGAGGTGTAGGAGGACATGGTGATGGTTATGGTAGCAATGGCGGTGGAGGCTATCGTTATGGCCCTTCCCTTGGAGGTTCAGGATATGGAAATGGCAATGGATATGACCAACGAAGAGATCATGGAGTGGGTTATGGAAGTAAAGGAGGTCCTGAGTCTAGCAATGCCTATGGAGATTCACGTGGATATGGAGCACGTGACAATGGCTATGGAGACTCACGTGGGTACGGAGCACGTGACAATGGGTATGGGAGTGGTGGAGGAGTTGGCGGTGGCTATGGAGTAGGAGGCCATGGTGGTAGTAGTGGAAGTGGTGGTTATGGTAATGGAGGAGTGCATGGAGGAGAATATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGTTATGATGGTGGATATGCACTCAAAAACTCCATCTCAAATAAGAATTGAGAATCCCTTTTATAAGTAATGAACCCAATATTCTTATTATGTCAACAAAAATAAAAACATTGGGTAAGAGATCGAGAATTGATGTTGTTTTCTAAATATATGTTGAAGTTGCTTTTAATGAATGTCAAATTCGAAACAACGATTCAAAGTTAAATTTGAATTACGTAAGTGTATCGTGACAAATTGATTGGAC

Coding sequence (CDS)

ATGGATGGATGCATTCTAGGCATTCCTATCCATTTGGCTATGGCTATCCCTAGAGTTTTGTGCTTTGGCTTACTTCTCTTTGTGAGTTTAGGCTTAGCTTCGGCTGCCAGAATTCTTCTTGATTATGATCCACGTACTCGTCATTACGATTATGATCGTCCTAGTCCAAGAGTAGGGTACGATCCTAGCCATCGTGATGGATCCTATGATAATTCATATGGTGGAGGCTCCAATAGAGGATATGGAATTGGAGACTCTGCTCTTGGAGGTTCCGGACGATACGAAGGTGGTGGAGAACATAATCCTAGATATAGAGATGGAAATGATGATCGTGGGGTTGGATATGGTAATGGTGGTGGATATGGAGGTGTAGGAGGACATGGTGATGGTTATGGTAGCAATGGCGGTGGAGGCTATCGTTATGGCCCTTCCCTTGGAGGTTCAGGATATGGAAATGGCAATGGATATGACCAACGAAGAGATCATGGAGTGGGTTATGGAAGTAAAGGAGGTCCTGAGTCTAGCAATGCCTATGGAGATTCACGTGGATATGGAGCACGTGACAATGGCTATGGAGACTCACGTGGGTACGGAGCACGTGACAATGGGTATGGGAGTGGTGGAGGAGTTGGCGGTGGCTATGGAGTAGGAGGCCATGGTGGTAGTAGTGGAAGTGGTGGTTATGGTAATGGAGGAGTGCATGGAGGAGAATATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGTTATGATGGTGGATATGCACTCAAAAACTCCATCTCAAATAAGAATTGA

Protein sequence

MDGCILGIPIHLAMAIPRVLCFGLLLFVSLGLASAARILLDYDPRTRHYDYDRPSPRVGYDPSHRDGSYDNSYGGGSNRGYGIGDSALGGSGRYEGGGEHNPRYRDGNDDRGVGYGNGGGYGGVGGHGDGYGSNGGGGYRYGPSLGGSGYGNGNGYDQRRDHGVGYGSKGGPESSNAYGDSRGYGARDNGYGDSRGYGARDNGYGSGGGVGGGYGVGGHGGSSGSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYALKNSISNKN
Homology
BLAST of Bhi11M000144 vs. TAIR 10
Match: AT5G46730.1 (glycine-rich protein )

HSP 1 Score: 48.9 bits (115), Expect = 7.2e-06
Identity = 102/257 (39.69%), Postives = 116/257 (45.14%), Query Frame = 0

Query: 22  FGLLLFVSLGLA---SAARILLDYDPRTRHYDYDRPSPRVGYDPSHRDGSYDNSYGGGSN 81
           F  + F+ LG++   + +R LL+Y   +    +       G       G     YGGGS 
Sbjct: 7   FSTVFFLILGVSICYATSRNLLNYGQASGGGGHGGGGGSGGVSSGGYGGESGGGYGGGSG 66

Query: 82  RGYG------IGDSALGGSGRYEGGGEHNPRYRDGNDDRGVGYGNGGGYGG-VGGH--GD 141
            G G       G ++ GGSG   GGG        G    G G G GGGYGG  GGH  G 
Sbjct: 67  EGAGGGYGGAEGYASGGGSGHGGGGG---GAASSGGYASGAGEGGGGGYGGAAGGHAGGG 126

Query: 142 GYGSNGGGGYRYGPSLGG---SGYGNGNGYDQRRDHGVGYGSKGGPESSNAYGDSRGYGA 201
           G GS GGGG  YG   GG   SGYGNG G       G G G+ G      AYG   G+G 
Sbjct: 127 GGGSGGGGGSAYG--AGGEHASGYGNGAG------EGGGAGASG--YGGGAYGGGGGHGG 186

Query: 202 RDNGYGDSRGYGARDNGYGSGGGVG--------GGYGVGGHGGSSGSGGYGNGGVHGGEY 256
              G      +G    G G GGG G        GGYG GG GGS G G YG GG HGG Y
Sbjct: 187 GGGGGSAGGAHGGSGYGGGEGGGAGGGGSHGGAGGYGGGGGGGSGGGGAYGGGGAHGGGY 246

BLAST of Bhi11M000144 vs. TAIR 10
Match: AT5G46730.2 (glycine-rich protein )

HSP 1 Score: 45.1 bits (105), Expect = 1.0e-04
Identity = 100/247 (40.49%), Postives = 115/247 (46.56%), Query Frame = 0

Query: 22  FGLLLFVSLGLA---SAARILLDYDPRTRHYDYDRPSPRVGYDPSHRDGSYDNSYGGGSN 81
           F  + F+ LG++   + +R LL+Y   +    +       G       G     YGGGS 
Sbjct: 7   FSTVFFLILGVSICYATSRNLLNYGQASGGGGHGGGGGSGGVSSGGYGGESGGGYGGGSG 66

Query: 82  RGYG------IGDSALGGSGRYEGGGEHNPRYRDGNDDRGVGYGNGGGYGG-VGGH--GD 141
            G G       G ++ GGSG   GGG        G    G G G GGGYGG  GGH  G 
Sbjct: 67  EGAGGGYGGAEGYASGGGSGHGGGGG---GAASSGGYASGAGEGGGGGYGGAAGGHAGGG 126

Query: 142 GYGSNGGGGYRYGPSLGG---SGYGNGNGYDQRRDHGVGYGSKGGPESSNAYGDSRGYGA 201
           G GS GGGG  YG   GG   SGYGNG G       G G G+ G      AYG   G+G 
Sbjct: 127 GGGSGGGGGSAYG--AGGEHASGYGNGAG------EGGGAGASG--YGGGAYGGGGGHGG 186

Query: 202 RDNGYGDSRGYGARDNGYGSGGGVGGGYGVGGHGGSSGSGGYGNGGVHGGEYDNSKGSGE 254
              G G S G     +GYGSGGG GGGYG G  GG  G GG G GG  GG Y    G G 
Sbjct: 187 --GGGGGSAGGAHGGSGYGSGGGEGGGYGGGAAGGYGGGGGGGEGG--GGSYGGEHGGGS 236

BLAST of Bhi11M000144 vs. ExPASy Swiss-Prot
Match: P10496 (Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.2e-05
Identity = 101/263 (38.40%), Postives = 114/263 (43.35%), Query Frame = 0

Query: 16  IPRVLCFGLLLFVSLGLASAARILLDYDPRTRHYDYDRPSPRVGYDPSHRDGSYDNSYGG 75
           I R+     L+ ++LG+ SA R LL  D               GY   H  G     YGG
Sbjct: 4   IHRLPSLVFLVLLALGVCSARRALLTLD--------------AGYGLGHGTG---GGYGG 63

Query: 76  GSNRGYGIGDSALGGSGRYEGGGEHN----PRYRDGNDDRGVGYG--NGGGYGGVGGHGD 135
            +    G G    GG G Y   GEH          G    GVGYG   G GYGG GG G 
Sbjct: 64  AAGSYGGGGGGGSGGGGGY--AGEHGVVGYGGGSGGGQGGGVGYGGDQGAGYGGGGGSGG 123

Query: 136 GYGSNGGGGYRYGPSLGGSGYGNGNGYDQRRDHGVGYGSKGGPESSNAYGDSRGYGARDN 195
           G G   GGG   G   GG G G G GY    +HG+GYG  GG  +    G + G GA+  
Sbjct: 124 GGGVAYGGGGERGGYGGGQGGGAGGGYGAGGEHGIGYGGGGGSGAGGGGGYNAG-GAQGG 183

Query: 196 GYGDSRGY-----------GARDNGYGSGGGVGGGYGVGG-HGGSSG-------SGGYGN 254
           GYG   G            G    G G+GGG GGGYG GG HGG  G        GGYG 
Sbjct: 184 GYGTGGGAGGGGGGGGDHGGGYGGGQGAGGGAGGGYGGGGEHGGGGGGGQGGGAGGGYGA 243

BLAST of Bhi11M000144 vs. ExPASy Swiss-Prot
Match: P10495 (Glycine-rich cell wall structural protein 1.0 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 4.6e-05
Identity = 102/260 (39.23%), Postives = 117/260 (45.00%), Query Frame = 0

Query: 14  MAIPRVLCFGLL-LFVSLGLASAARILLDYDPRTRHYDYDRPSPRVGYDPSHRDGSYDNS 73
           MA  +VL   +L +FV  G+ SAAR LL  +        DR +  VG       G   + 
Sbjct: 1   MATSKVLLSNVLFVFVCFGICSAARTLLTLE--------DRVNLHVGTVVGGYGGGGGSG 60

Query: 74  YGGGSNR----GYGIGDSALGGSGRYEG----GGEHNPRYRDGNDDRGVGYGNGGGYGGV 133
            GGG       G G G+ A GG G   G    GG H      GN   G G  +GGGYGG 
Sbjct: 61  GGGGGAAVELGGGGYGEGAGGGEGAGAGYGAAGGGHGG--GGGNGGGGGGGADGGGYGGG 120

Query: 134 GGH--GDGYGSNG--GGGYRYGPSLGGSGYGNGNGYDQRRDHGVGYGSKGGPESSNAYGD 193
            G   G+GYG  G  GGGY  G   GG G G   G       G G G+ GG   +N  G 
Sbjct: 121 AGKGGGEGYGGGGANGGGYGGGGGSGGGGGGGAGGAGSGYGGGEGSGAGGGYGGANGGGG 180

Query: 194 SRGYGARDNGYGDSRGYGARDNGYGSGGGVGGGYGVGGHG------GSSGSGGYGNGGVH 253
               G    G G + G GA   G G+G G GGGYG G  G      G  G GGYG GG  
Sbjct: 181 GGNGGGGGGGSGGAHGGGAAGGGEGAGQGAGGGYGGGAAGGGGRGSGGGGGGGYGGGGAR 240

Query: 254 GGEYDNSKGSGEEGGYDGGY 255
           G  Y    GSGE GG+ GGY
Sbjct: 241 GSGYGGGGGSGEGGGHGGGY 250

BLAST of Bhi11M000144 vs. NCBI nr
Match: XP_038903641.1 (glycine-rich cell wall structural protein 2-like [Benincasa hispida])

HSP 1 Score: 456.4 bits (1173), Expect = 1.6e-124
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0

Query: 14  MAIPRVLCFGLLLFVSLGLASAARILLDYDPRTRHYDYDRPSPRVGYDPSHRDGSYDNSY 73
           MAIPRVLCFGLLLFVSLGLASAARILLDYDPRTRHYDYDRPSPRVGYDPSHRDGSYDNSY
Sbjct: 1   MAIPRVLCFGLLLFVSLGLASAARILLDYDPRTRHYDYDRPSPRVGYDPSHRDGSYDNSY 60

Query: 74  GGGSNRGYGIGDSALGGSGRYEGGGEHNPRYRDGNDDRGVGYGNGGGYGGVGGHGDGYGS 133
           GGGSNRGYGIGDSALGGSGRYEGGGEHNPRYRDGNDDRGVGYGNGGGYGGVGGHGDGYGS
Sbjct: 61  GGGSNRGYGIGDSALGGSGRYEGGGEHNPRYRDGNDDRGVGYGNGGGYGGVGGHGDGYGS 120

Query: 134 NGGGGYRYGPSLGGSGYGNGNGYDQRRDHGVGYGSKGGPESSNAYGDSRGYGARDNGYGD 193
           NGGGGYRYGPSLGGSGYGNGNGYDQRRDHGVGYGSKGGPESSNAYGDSRGYGARDNGYGD
Sbjct: 121 NGGGGYRYGPSLGGSGYGNGNGYDQRRDHGVGYGSKGGPESSNAYGDSRGYGARDNGYGD 180

Query: 194 SRGYGARDNGYGSGGGVGGGYGVGGHGGSSGSGGYGNGGVHGGEYDNSKGSGEEGGYDGG 253
           SRGYGARDNGYGSGGGVGGGYGVGGHGGSSGSGGYGNGGVHGGEYDNSKGSGEEGGYDGG
Sbjct: 181 SRGYGARDNGYGSGGGVGGGYGVGGHGGSSGSGGYGNGGVHGGEYDNSKGSGEEGGYDGG 240

Query: 254 YALKNSISNKN 265
           YALKNSISNKN
Sbjct: 241 YALKNSISNKN 251

BLAST of Bhi11M000144 vs. NCBI nr
Match: XP_038903421.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida])

HSP 1 Score: 345.5 bits (885), Expect = 4.0e-91
Identity = 209/266 (78.57%), Postives = 223/266 (83.83%), Query Frame = 0

Query: 1   MDGCILGIPIHLAMAIPRVLCFGLLLFVSLGLASAARILLDYDPRTRHYDYDRPSPRVGY 60
           MDG ILGIPIH  MA  RVLCFG L+FV  GLASAAR LLDYDPRTRHYDYDRP+PRVGY
Sbjct: 1   MDGYILGIPIH--MATTRVLCFGFLVFVCFGLASAARTLLDYDPRTRHYDYDRPTPRVGY 60

Query: 61  DPSHRDGSYDNSYGGGSNRGYGIGDSALGGSGRYEGGGEHNPRYRDGNDDRGVGYGNGGG 120
           DPSHRDGSYDN+YG  S RGYGIGDSALGGSG+YEG   H+  Y   NDDRGVGYGNGGG
Sbjct: 61  DPSHRDGSYDNAYGRSSGRGYGIGDSALGGSGQYEGDRGHDSGYGGRNDDRGVGYGNGGG 120

Query: 121 YGGVGGHGDGYGSNGGGGY--RYGPSLGGSGYGNGNGYDQRRDHGVGYGSKGGPESSNAY 180
           YGG+ GHG+GYG NGGG Y  R GPSLGGSGYG+G+GYDQ RDHGVGYGS+GG +SSN Y
Sbjct: 121 YGGIEGHGNGYGRNGGGSYENRDGPSLGGSGYGSGDGYDQGRDHGVGYGSRGGADSSNGY 180

Query: 181 GDSRGYGARDNGYGDSRGYGARDNGYGSGGGVGGGYGVGGHGGSSGSGGYGNGGVHGGEY 240
           GDSRGY ARDN      GYGA DN YGSGGG GGGYGVGGHGG  GSGGYGNGGVHGGEY
Sbjct: 181 GDSRGYQARDN------GYGAHDNVYGSGGGAGGGYGVGGHGGGIGSGGYGNGGVHGGEY 240

Query: 241 DNSKGSGEEGGYDGGYALKNSISNKN 265
           DN+KGSG EGGYDGGYA+K+SISN N
Sbjct: 241 DNNKGSG-EGGYDGGYAVKSSISNTN 257

BLAST of Bhi11M000144 vs. NCBI nr
Match: XP_008449165.1 (PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo] >KAA0053039.1 glycine-rich cell wall structural protein 1.8-like [Cucumis melo var. makuwa] >TYK11494.1 glycine-rich cell wall structural protein 1.8-like [Cucumis melo var. makuwa])

HSP 1 Score: 282.7 bits (722), Expect = 3.2e-72
Identity = 179/258 (69.38%), Postives = 189/258 (73.26%), Query Frame = 0

Query: 14  MAIPRVLCFGLLLFVSLGLASAARILLDYDPRTRHYDYDRPSPRVGYDPSHRDGSYDNSY 73
           MAI R LC   LLFV LGLASA R LLDYDPRTRHY YDRPSPRVGYDP HRD SYDN+Y
Sbjct: 1   MAILRALCLAFLLFVGLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60

Query: 74  GGGSNRGYGIGDSALGGSGRYEGGGEHNPRYRDGNDDRGVGYGNGGGYGGVGGHGDGYGS 133
           GG S+RG+GIGDSALGGSG YEGGG  +  Y D ND+RGVGYGNGGGYGGVGGHGDGYG+
Sbjct: 61  GGSSSRGHGIGDSALGGSG-YEGGGRRDYGYGDRNDNRGVGYGNGGGYGGVGGHGDGYGN 120

Query: 134 NGGGGY--RYGPSLGGSGYGNG-----NGYDQRRDHGVGYGSKGGPESSNAYGDSRGYGA 193
           NGGGGY  RYGPSLGGSGYG+G     NGYD R  H                    GYG 
Sbjct: 121 NGGGGYGDRYGPSLGGSGYGSGGKGSDNGYDDRHSH--------------------GYGG 180

Query: 194 RDNGYGDSRGYGARDNGYGSGGGVGGGYGVGGHGGSSGSGGYGNGGVHGGEYDNSKGSGE 253
           RDNGYGDS G+  RD+GYGSGGGV              SGGYGNGGVHGGEYDNSKGSGE
Sbjct: 181 RDNGYGDSHGHEGRDSGYGSGGGV--------------SGGYGNGGVHGGEYDNSKGSGE 223

Query: 254 EGGYDGGYALKNSISNKN 265
           EGGYDGGYA+KNSIS  N
Sbjct: 241 EGGYDGGYAVKNSISKGN 223

BLAST of Bhi11M000144 vs. NCBI nr
Match: KAE8650023.1 (hypothetical protein Csa_011563 [Cucumis sativus])

HSP 1 Score: 269.2 bits (687), Expect = 3.7e-68
Identity = 178/287 (62.02%), Postives = 191/287 (66.55%), Query Frame = 0

Query: 14  MAIPRVLCFGLLLFVSLGLASAARILLDYDPRTRHYDYDRPSPRVGYDPSHRDGSYDNSY 73
           MAIP+VLC G LLFV LGLASAAR LLDYDPRTR YDYD P+PRVGYDPSHRD SYD++Y
Sbjct: 1   MAIPKVLCIGFLLFVGLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDSAY 60

Query: 74  GGGSNRGYGIGDSALGGSGRYEGGG---------------------------------EH 133
            G S++GYG+GDSALGGSGRYEGGG                                 +H
Sbjct: 61  SGSSSKGYGVGDSALGGSGRYEGGGGRDSGYGGRNDDRGAGYGGRNDDHGAGYGSRNDDH 120

Query: 134 NPRYRDGNDDRGVGYGNGGGYGGVGGHGDGYGSNGGGGY--RYGPSLGGSGYGNGNGYDQ 193
              Y   NDDRGVGYGNGGGYG VGGHGDGYG+NGGG Y  RYGPSLGGSGYG+      
Sbjct: 121 GAGYGGRNDDRGVGYGNGGGYGSVGGHGDGYGNNGGGSYGDRYGPSLGGSGYGS------ 180

Query: 194 RRDHGVGYGSKGGPESSNAYGD-SRGYGARDNGYGDSRGYGARDNGYGSGGGVGGGYGVG 253
                      GG  S N Y D SRG GARDN YGDS G+  RD+GYGSGGGV       
Sbjct: 181 -----------GGKGSGNGYDDHSRGNGARDNNYGDSHGHEGRDSGYGSGGGV------- 240

Query: 254 GHGGSSGSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYALKNSISNKN 265
                  SGGYGNGGVHGGE+DNSKGSGEEGG DGGYA KNSISNKN
Sbjct: 241 -------SGGYGNGGVHGGEHDNSKGSGEEGGSDGGYAFKNSISNKN 256

BLAST of Bhi11M000144 vs. NCBI nr
Match: KAE8650024.1 (hypothetical protein Csa_011560 [Cucumis sativus])

HSP 1 Score: 265.8 bits (678), Expect = 4.0e-67
Identity = 175/257 (68.09%), Postives = 188/257 (73.15%), Query Frame = 0

Query: 12  LAMAIPRVLCFGLLLFVSLGLASAARILLDYDPRTRHYDYDRPSPRVGYDPSHRDGSYDN 71
           L+MAI R LC   LLFV LGLASA R LLDYDPRT  Y YDRPSPRVGYDP H D SYD 
Sbjct: 14  LSMAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDK 73

Query: 72  SYGGGSNRGYGIGDSALGGSGRYEGGGEHNPRYRDGNDDRGVGYGN-GGGYGGVGGHGDG 131
           +YGG S+RG+GIGDSALGGSG YEGGG H+  Y D ++DRGVGYGN GGGYGGVGGHGDG
Sbjct: 74  AYGGSSSRGHGIGDSALGGSG-YEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGDG 133

Query: 132 YGSNGGGGY--RYGPSLGGSGYGNGNGYDQRRDHGVGYGSKGGPESSNAYGD-SRGYGAR 191
           YG+NGGG Y  RYGPSLGGSGYG+                 GG  S N Y D SRG GAR
Sbjct: 134 YGNNGGGSYGDRYGPSLGGSGYGS-----------------GGKGSGNGYDDHSRGNGAR 193

Query: 192 DNGYGDSRGYGARDNGYGSGGGVGGGYGVGGHGGSSGSGGYGNGGVHGGEYDNSKGSGEE 251
           DN YGDS G+G RD+GYGSGGGV              +GGYGNGGVHGGEYDNSKGSGEE
Sbjct: 194 DNSYGDSHGHGGRDSGYGSGGGV--------------TGGYGNGGVHGGEYDNSKGSGEE 238

Query: 252 GGYDGGYALKNSISNKN 265
           GGYDGGYA+KNSIS  N
Sbjct: 254 GGYDGGYAVKNSISKGN 238

BLAST of Bhi11M000144 vs. ExPASy TrEMBL
Match: A0A5A7UHU2 (Glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001580 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.6e-72
Identity = 179/258 (69.38%), Postives = 189/258 (73.26%), Query Frame = 0

Query: 14  MAIPRVLCFGLLLFVSLGLASAARILLDYDPRTRHYDYDRPSPRVGYDPSHRDGSYDNSY 73
           MAI R LC   LLFV LGLASA R LLDYDPRTRHY YDRPSPRVGYDP HRD SYDN+Y
Sbjct: 1   MAILRALCLAFLLFVGLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60

Query: 74  GGGSNRGYGIGDSALGGSGRYEGGGEHNPRYRDGNDDRGVGYGNGGGYGGVGGHGDGYGS 133
           GG S+RG+GIGDSALGGSG YEGGG  +  Y D ND+RGVGYGNGGGYGGVGGHGDGYG+
Sbjct: 61  GGSSSRGHGIGDSALGGSG-YEGGGRRDYGYGDRNDNRGVGYGNGGGYGGVGGHGDGYGN 120

Query: 134 NGGGGY--RYGPSLGGSGYGNG-----NGYDQRRDHGVGYGSKGGPESSNAYGDSRGYGA 193
           NGGGGY  RYGPSLGGSGYG+G     NGYD R  H                    GYG 
Sbjct: 121 NGGGGYGDRYGPSLGGSGYGSGGKGSDNGYDDRHSH--------------------GYGG 180

Query: 194 RDNGYGDSRGYGARDNGYGSGGGVGGGYGVGGHGGSSGSGGYGNGGVHGGEYDNSKGSGE 253
           RDNGYGDS G+  RD+GYGSGGGV              SGGYGNGGVHGGEYDNSKGSGE
Sbjct: 181 RDNGYGDSHGHEGRDSGYGSGGGV--------------SGGYGNGGVHGGEYDNSKGSGE 223

Query: 254 EGGYDGGYALKNSISNKN 265
           EGGYDGGYA+KNSIS  N
Sbjct: 241 EGGYDGGYAVKNSISKGN 223

BLAST of Bhi11M000144 vs. ExPASy TrEMBL
Match: A0A1S3BMC4 (glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LOC103491115 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.6e-72
Identity = 179/258 (69.38%), Postives = 189/258 (73.26%), Query Frame = 0

Query: 14  MAIPRVLCFGLLLFVSLGLASAARILLDYDPRTRHYDYDRPSPRVGYDPSHRDGSYDNSY 73
           MAI R LC   LLFV LGLASA R LLDYDPRTRHY YDRPSPRVGYDP HRD SYDN+Y
Sbjct: 1   MAILRALCLAFLLFVGLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60

Query: 74  GGGSNRGYGIGDSALGGSGRYEGGGEHNPRYRDGNDDRGVGYGNGGGYGGVGGHGDGYGS 133
           GG S+RG+GIGDSALGGSG YEGGG  +  Y D ND+RGVGYGNGGGYGGVGGHGDGYG+
Sbjct: 61  GGSSSRGHGIGDSALGGSG-YEGGGRRDYGYGDRNDNRGVGYGNGGGYGGVGGHGDGYGN 120

Query: 134 NGGGGY--RYGPSLGGSGYGNG-----NGYDQRRDHGVGYGSKGGPESSNAYGDSRGYGA 193
           NGGGGY  RYGPSLGGSGYG+G     NGYD R  H                    GYG 
Sbjct: 121 NGGGGYGDRYGPSLGGSGYGSGGKGSDNGYDDRHSH--------------------GYGG 180

Query: 194 RDNGYGDSRGYGARDNGYGSGGGVGGGYGVGGHGGSSGSGGYGNGGVHGGEYDNSKGSGE 253
           RDNGYGDS G+  RD+GYGSGGGV              SGGYGNGGVHGGEYDNSKGSGE
Sbjct: 181 RDNGYGDSHGHEGRDSGYGSGGGV--------------SGGYGNGGVHGGEYDNSKGSGE 223

Query: 254 EGGYDGGYALKNSISNKN 265
           EGGYDGGYA+KNSIS  N
Sbjct: 241 EGGYDGGYAVKNSISKGN 223

BLAST of Bhi11M000144 vs. ExPASy TrEMBL
Match: A0A0A0L1V3 (Glycine-rich protein-1 OS=Cucumis sativus OX=3659 GN=Csa_3G011070 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 5.7e-67
Identity = 174/255 (68.24%), Postives = 186/255 (72.94%), Query Frame = 0

Query: 14  MAIPRVLCFGLLLFVSLGLASAARILLDYDPRTRHYDYDRPSPRVGYDPSHRDGSYDNSY 73
           MAI R LC   LLFV LGLASA R LLDYDPRT  Y YDRPSPRVGYDP H D SYD +Y
Sbjct: 1   MAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAY 60

Query: 74  GGGSNRGYGIGDSALGGSGRYEGGGEHNPRYRDGNDDRGVGYGN-GGGYGGVGGHGDGYG 133
           GG S+RG+GIGDSALGGSG YEGGG H+  Y D ++DRGVGYGN GGGYGGVGGHGDGYG
Sbjct: 61  GGSSSRGHGIGDSALGGSG-YEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGDGYG 120

Query: 134 SNGGGGY--RYGPSLGGSGYGNGNGYDQRRDHGVGYGSKGGPESSNAYGD-SRGYGARDN 193
           +NGGG Y  RYGPSLGGSGYG+                 GG  S N Y D SRG GARDN
Sbjct: 121 NNGGGSYGDRYGPSLGGSGYGS-----------------GGKGSGNGYDDHSRGNGARDN 180

Query: 194 GYGDSRGYGARDNGYGSGGGVGGGYGVGGHGGSSGSGGYGNGGVHGGEYDNSKGSGEEGG 253
            YGDS G+G RD+GYGSGGGV              +GGYGNGGVHGGEYDNSKGSGEEGG
Sbjct: 181 SYGDSHGHGGRDSGYGSGGGV--------------TGGYGNGGVHGGEYDNSKGSGEEGG 223

Query: 254 YDGGYALKNSISNKN 265
           YDGGYA+KNSIS  N
Sbjct: 241 YDGGYAVKNSISKGN 223

BLAST of Bhi11M000144 vs. ExPASy TrEMBL
Match: A0A5A7UEU3 (Glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001560 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 9.1e-65
Identity = 180/324 (55.56%), Postives = 189/324 (58.33%), Query Frame = 0

Query: 14  MAIPRVLCFGLLLFVSLGLASAARILLDYDPRTRHYDYDRPSPRVGYDPSHRDGSYDNSY 73
           MAI R LC   LLFV LGLASAAR LLDYDPRTR YDYD P+PRVGYDPSHRD SYDN+Y
Sbjct: 1   MAISRALCISFLLFVCLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDNAY 60

Query: 74  GGGSNRGYGIGDSALGGSGRYEGGGEHN-------------------------------- 133
           GG SNRGYG+GDSALGGSGRYEGGG H+                                
Sbjct: 61  GGSSNRGYGVGDSALGGSGRYEGGGGHDYGYGGRNDDRGVGYGGRNDDHGAGYGAGYGGR 120

Query: 134 --------------------------------------PRYRDGNDDRGVGYGNGGGYGG 193
                                                   Y   NDDRGVGYGNGGGYGG
Sbjct: 121 NDDRGAGYGGRNDDRGAGYGRRNDDHGAGYGGRNDDRGAGYGGRNDDRGVGYGNGGGYGG 180

Query: 194 VGGHGDGYGSNGGGGY--RYGPSLGGSGYGNGNGYDQRRDHGVGYGSKGGPESSNAYGD- 253
           VGGHGDGYG+N GGGY  RY PSLGGSGYGN                 GG  S N Y D 
Sbjct: 181 VGGHGDGYGNNVGGGYGDRYSPSLGGSGYGN-----------------GGKGSGNGYDDH 240

Query: 254 SRGYGARDNGYGDSRGYGARDNGYGSGGGVGGGYGVGGHGGSSGSGGYGNGGVHGGEYDN 265
           SRGYG  DNGYGDS G+G RD+GYGSGGGV              SGGYGNGGVHGGEYDN
Sbjct: 241 SRGYGGHDNGYGDSHGHGGRDSGYGSGGGV--------------SGGYGNGGVHGGEYDN 293

BLAST of Bhi11M000144 vs. ExPASy TrEMBL
Match: A0A1S3BM26 (glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo OX=3656 GN=LOC103491114 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 9.1e-65
Identity = 180/324 (55.56%), Postives = 189/324 (58.33%), Query Frame = 0

Query: 14  MAIPRVLCFGLLLFVSLGLASAARILLDYDPRTRHYDYDRPSPRVGYDPSHRDGSYDNSY 73
           MAI R LC   LLFV LGLASAAR LLDYDPRTR YDYD P+PRVGYDPSHRD SYDN+Y
Sbjct: 1   MAISRALCISFLLFVCLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDNAY 60

Query: 74  GGGSNRGYGIGDSALGGSGRYEGGGEHN-------------------------------- 133
           GG SNRGYG+GDSALGGSGRYEGGG H+                                
Sbjct: 61  GGSSNRGYGVGDSALGGSGRYEGGGGHDYGYGGRNDDRGVGYGGRNDDHGAGYGAGYGGR 120

Query: 134 --------------------------------------PRYRDGNDDRGVGYGNGGGYGG 193
                                                   Y   NDDRGVGYGNGGGYGG
Sbjct: 121 NDDRGAGYGGRNDDRGAGYGRRNDDHGAGYGGRNDDRGAGYGGRNDDRGVGYGNGGGYGG 180

Query: 194 VGGHGDGYGSNGGGGY--RYGPSLGGSGYGNGNGYDQRRDHGVGYGSKGGPESSNAYGD- 253
           VGGHGDGYG+N GGGY  RY PSLGGSGYGN                 GG  S N Y D 
Sbjct: 181 VGGHGDGYGNNVGGGYGDRYSPSLGGSGYGN-----------------GGKGSGNGYDDH 240

Query: 254 SRGYGARDNGYGDSRGYGARDNGYGSGGGVGGGYGVGGHGGSSGSGGYGNGGVHGGEYDN 265
           SRGYG  DNGYGDS G+G RD+GYGSGGGV              SGGYGNGGVHGGEYDN
Sbjct: 241 SRGYGGHDNGYGDSHGHGGRDSGYGSGGGV--------------SGGYGNGGVHGGEYDN 293

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT5G46730.17.2e-0639.69glycine-rich protein [more]
AT5G46730.21.0e-0440.49glycine-rich protein [more]
Match NameE-valueIdentityDescription
P104961.2e-0538.40Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2... [more]
P104954.6e-0539.23Glycine-rich cell wall structural protein 1.0 OS=Phaseolus vulgaris OX=3885 PE=2... [more]
Match NameE-valueIdentityDescription
XP_038903641.11.6e-124100.00glycine-rich cell wall structural protein 2-like [Benincasa hispida][more]
XP_038903421.14.0e-9178.57glycine-rich cell wall structural protein 1.8-like [Benincasa hispida][more]
XP_008449165.13.2e-7269.38PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo] >KA... [more]
KAE8650023.13.7e-6862.02hypothetical protein Csa_011563 [Cucumis sativus][more]
KAE8650024.14.0e-6768.09hypothetical protein Csa_011560 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A5A7UHU21.6e-7269.38Glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo var. makuwa O... [more]
A0A1S3BMC41.6e-7269.38glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LO... [more]
A0A0A0L1V35.7e-6768.24Glycine-rich protein-1 OS=Cucumis sativus OX=3659 GN=Csa_3G011070 PE=4 SV=1[more]
A0A5A7UEU39.1e-6555.56Glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo var. makuwa O... [more]
A0A1S3BM269.1e-6555.56glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo OX=3656 GN=LO... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..264
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..189
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..64

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi11G000144Bhi11G000144gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi11M000144.exon1Bhi11M000144.exon1exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi11M000144.utr3p1Bhi11M000144.utr3p1three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi11M000144cds.Bhi11M000144CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi11M000144.utr5p1Bhi11M000144.utr5p1five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi11M000144Bhi11M000144-proteinpolypeptide