Bhi11M000144 (mRNA) Wax gourd (B227) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTAAAGTTTACTAAAATCTAGCAAAATGGTAGTGCAAGTGGAAGATGGGATCCAAAGGCAGGTATTGATGTGATTCTAGTTCCAATTATAATCTTACTTTTGAGGTTAATGACATAGGCAAAAGCACACTGTAGTGCTTGCCTCTTGAACCTTGTTTGAGCTGCATATCCAAAATTAATAATTTTTTTTGCATCTGCCCCTCCTTAATAACCACTAAGCTAGCACACTATAGAGAAGCTAAGGCATCCTCGTTTTCTATATAAGGTGATGGATGGATGCATTCTAGGCATTCCTATCCATTTGGCTATGGCTATCCCTAGAGTTTTGTGCTTTGGCTTACTTCTCTTTGTGAGTTTAGGCTTAGCTTCGGCTGCCAGAATTCTTCTTGATTATGATCCACGTACTCGTCATTACGATTATGATCGTCCTAGTCCAAGAGTAGGGTACGATCCTAGCCATCGTGATGGATCCTATGATAATTCATATGGTGGAGGCTCCAATAGAGGATATGGAATTGGAGACTCTGCTCTTGGAGGTTCCGGACGATACGAAGGTGGTGGAGAACATAATCCTAGATATAGAGATGGAAATGATGATCGTGGGGTTGGATATGGTAATGGTGGTGGATATGGAGGTGTAGGAGGACATGGTGATGGTTATGGTAGCAATGGCGGTGGAGGCTATCGTTATGGCCCTTCCCTTGGAGGTTCAGGATATGGAAATGGCAATGGATATGACCAACGAAGAGATCATGGAGTGGGTTATGGAAGTAAAGGAGGTCCTGAGTCTAGCAATGCCTATGGAGATTCACGTGGATATGGAGCACGTGACAATGGCTATGGAGACTCACGTGGGTACGGAGCACGTGACAATGGGTATGGGAGTGGTGGAGGAGTTGGCGGTGGCTATGGAGTAGGAGGCCATGGTGGTAGTAGTGGAAGTGGTGGTTATGGTAATGGAGGAGTGCATGGAGGAGAATATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGTTATGATGGTGGATATGCACTCAAAAACTCCATCTCAAATAAGAATTGAGAATCCCTTTTATAAGTAATGAACCCAATATTCTTATTATGTCAACAAAAATAAAAACATTGGGTAAGAGATCGAGAATTGATGTTGTTTTCTAAATATATGTTGAAGTTGCTTTTAATGAATGTCAAATTCGAAACAACGATTCAAAGTTAAATTTGAATTACGTAAGTGTATCGTGACAAATTGATTGGAC GTAAAGTTTACTAAAATCTAGCAAAATGGTAGTGCAAGTGGAAGATGGGATCCAAAGGCAGGTATTGATGTGATTCTAGTTCCAATTATAATCTTACTTTTGAGGTTAATGACATAGGCAAAAGCACACTGTAGTGCTTGCCTCTTGAACCTTGTTTGAGCTGCATATCCAAAATTAATAATTTTTTTTGCATCTGCCCCTCCTTAATAACCACTAAGCTAGCACACTATAGAGAAGCTAAGGCATCCTCGTTTTCTATATAAGGTGATGGATGGATGCATTCTAGGCATTCCTATCCATTTGGCTATGGCTATCCCTAGAGTTTTGTGCTTTGGCTTACTTCTCTTTGTGAGTTTAGGCTTAGCTTCGGCTGCCAGAATTCTTCTTGATTATGATCCACGTACTCGTCATTACGATTATGATCGTCCTAGTCCAAGAGTAGGGTACGATCCTAGCCATCGTGATGGATCCTATGATAATTCATATGGTGGAGGCTCCAATAGAGGATATGGAATTGGAGACTCTGCTCTTGGAGGTTCCGGACGATACGAAGGTGGTGGAGAACATAATCCTAGATATAGAGATGGAAATGATGATCGTGGGGTTGGATATGGTAATGGTGGTGGATATGGAGGTGTAGGAGGACATGGTGATGGTTATGGTAGCAATGGCGGTGGAGGCTATCGTTATGGCCCTTCCCTTGGAGGTTCAGGATATGGAAATGGCAATGGATATGACCAACGAAGAGATCATGGAGTGGGTTATGGAAGTAAAGGAGGTCCTGAGTCTAGCAATGCCTATGGAGATTCACGTGGATATGGAGCACGTGACAATGGCTATGGAGACTCACGTGGGTACGGAGCACGTGACAATGGGTATGGGAGTGGTGGAGGAGTTGGCGGTGGCTATGGAGTAGGAGGCCATGGTGGTAGTAGTGGAAGTGGTGGTTATGGTAATGGAGGAGTGCATGGAGGAGAATATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGTTATGATGGTGGATATGCACTCAAAAACTCCATCTCAAATAAGAATTGAGAATCCCTTTTATAAGTAATGAACCCAATATTCTTATTATGTCAACAAAAATAAAAACATTGGGTAAGAGATCGAGAATTGATGTTGTTTTCTAAATATATGTTGAAGTTGCTTTTAATGAATGTCAAATTCGAAACAACGATTCAAAGTTAAATTTGAATTACGTAAGTGTATCGTGACAAATTGATTGGAC ATGGATGGATGCATTCTAGGCATTCCTATCCATTTGGCTATGGCTATCCCTAGAGTTTTGTGCTTTGGCTTACTTCTCTTTGTGAGTTTAGGCTTAGCTTCGGCTGCCAGAATTCTTCTTGATTATGATCCACGTACTCGTCATTACGATTATGATCGTCCTAGTCCAAGAGTAGGGTACGATCCTAGCCATCGTGATGGATCCTATGATAATTCATATGGTGGAGGCTCCAATAGAGGATATGGAATTGGAGACTCTGCTCTTGGAGGTTCCGGACGATACGAAGGTGGTGGAGAACATAATCCTAGATATAGAGATGGAAATGATGATCGTGGGGTTGGATATGGTAATGGTGGTGGATATGGAGGTGTAGGAGGACATGGTGATGGTTATGGTAGCAATGGCGGTGGAGGCTATCGTTATGGCCCTTCCCTTGGAGGTTCAGGATATGGAAATGGCAATGGATATGACCAACGAAGAGATCATGGAGTGGGTTATGGAAGTAAAGGAGGTCCTGAGTCTAGCAATGCCTATGGAGATTCACGTGGATATGGAGCACGTGACAATGGCTATGGAGACTCACGTGGGTACGGAGCACGTGACAATGGGTATGGGAGTGGTGGAGGAGTTGGCGGTGGCTATGGAGTAGGAGGCCATGGTGGTAGTAGTGGAAGTGGTGGTTATGGTAATGGAGGAGTGCATGGAGGAGAATATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGTTATGATGGTGGATATGCACTCAAAAACTCCATCTCAAATAAGAATTGA MDGCILGIPIHLAMAIPRVLCFGLLLFVSLGLASAARILLDYDPRTRHYDYDRPSPRVGYDPSHRDGSYDNSYGGGSNRGYGIGDSALGGSGRYEGGGEHNPRYRDGNDDRGVGYGNGGGYGGVGGHGDGYGSNGGGGYRYGPSLGGSGYGNGNGYDQRRDHGVGYGSKGGPESSNAYGDSRGYGARDNGYGDSRGYGARDNGYGSGGGVGGGYGVGGHGGSSGSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYALKNSISNKN Homology
BLAST of Bhi11M000144 vs. TAIR 10
Match: AT5G46730.1 (glycine-rich protein ) HSP 1 Score: 48.9 bits (115), Expect = 7.2e-06 Identity = 102/257 (39.69%), Postives = 116/257 (45.14%), Query Frame = 0
BLAST of Bhi11M000144 vs. TAIR 10
Match: AT5G46730.2 (glycine-rich protein ) HSP 1 Score: 45.1 bits (105), Expect = 1.0e-04 Identity = 100/247 (40.49%), Postives = 115/247 (46.56%), Query Frame = 0
BLAST of Bhi11M000144 vs. ExPASy Swiss-Prot
Match: P10496 (Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 1.2e-05 Identity = 101/263 (38.40%), Postives = 114/263 (43.35%), Query Frame = 0
BLAST of Bhi11M000144 vs. ExPASy Swiss-Prot
Match: P10495 (Glycine-rich cell wall structural protein 1.0 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 4.6e-05 Identity = 102/260 (39.23%), Postives = 117/260 (45.00%), Query Frame = 0
BLAST of Bhi11M000144 vs. NCBI nr
Match: XP_038903641.1 (glycine-rich cell wall structural protein 2-like [Benincasa hispida]) HSP 1 Score: 456.4 bits (1173), Expect = 1.6e-124 Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0
BLAST of Bhi11M000144 vs. NCBI nr
Match: XP_038903421.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida]) HSP 1 Score: 345.5 bits (885), Expect = 4.0e-91 Identity = 209/266 (78.57%), Postives = 223/266 (83.83%), Query Frame = 0
BLAST of Bhi11M000144 vs. NCBI nr
Match: XP_008449165.1 (PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo] >KAA0053039.1 glycine-rich cell wall structural protein 1.8-like [Cucumis melo var. makuwa] >TYK11494.1 glycine-rich cell wall structural protein 1.8-like [Cucumis melo var. makuwa]) HSP 1 Score: 282.7 bits (722), Expect = 3.2e-72 Identity = 179/258 (69.38%), Postives = 189/258 (73.26%), Query Frame = 0
BLAST of Bhi11M000144 vs. NCBI nr
Match: KAE8650023.1 (hypothetical protein Csa_011563 [Cucumis sativus]) HSP 1 Score: 269.2 bits (687), Expect = 3.7e-68 Identity = 178/287 (62.02%), Postives = 191/287 (66.55%), Query Frame = 0
BLAST of Bhi11M000144 vs. NCBI nr
Match: KAE8650024.1 (hypothetical protein Csa_011560 [Cucumis sativus]) HSP 1 Score: 265.8 bits (678), Expect = 4.0e-67 Identity = 175/257 (68.09%), Postives = 188/257 (73.15%), Query Frame = 0
BLAST of Bhi11M000144 vs. ExPASy TrEMBL
Match: A0A5A7UHU2 (Glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001580 PE=4 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 1.6e-72 Identity = 179/258 (69.38%), Postives = 189/258 (73.26%), Query Frame = 0
BLAST of Bhi11M000144 vs. ExPASy TrEMBL
Match: A0A1S3BMC4 (glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LOC103491115 PE=4 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 1.6e-72 Identity = 179/258 (69.38%), Postives = 189/258 (73.26%), Query Frame = 0
BLAST of Bhi11M000144 vs. ExPASy TrEMBL
Match: A0A0A0L1V3 (Glycine-rich protein-1 OS=Cucumis sativus OX=3659 GN=Csa_3G011070 PE=4 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 5.7e-67 Identity = 174/255 (68.24%), Postives = 186/255 (72.94%), Query Frame = 0
BLAST of Bhi11M000144 vs. ExPASy TrEMBL
Match: A0A5A7UEU3 (Glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001560 PE=4 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 9.1e-65 Identity = 180/324 (55.56%), Postives = 189/324 (58.33%), Query Frame = 0
BLAST of Bhi11M000144 vs. ExPASy TrEMBL
Match: A0A1S3BM26 (glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo OX=3656 GN=LOC103491114 PE=4 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 9.1e-65 Identity = 180/324 (55.56%), Postives = 189/324 (58.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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