Bhi10M001310 (mRNA) Wax gourd (B227) v1

Overview


Name	Bhi10M001310
Type	mRNA
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	binding partner of ACD11 1-like
Location	chr10: 41250723 .. 41253162 (-)
Sequence length	1232
RNA-Seq Expression	Bhi10M001310
Synteny	Bhi10M001310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAAAATGAAAGAAACATAAGAAAGAAAATAAAAATAAAAATAAAATAAAAAAATAGAATCAGTCAGTTTCTTTTGTTTTGCCACATGTATTACTACGAACCTAAACAACCGCCAAGCCACACCACAACTCTCAAAGGCCATTCTTCCTTCTTCCTCTCCCCTCTCTAAGAATTTCGATTGGCAAACCTCTCAGGTGGATCAGACAGAATCATCATGGCAGTAGGTTTCAATTTTTGTTTATTTTTCTGTTAATTATCTTCGCAATCTGTTTGTTATTATCCTCAATTTTCATTCTGATTTGAGGTCTGATTTCTACTTGTTATCAATATCAATTACTTAGGATTCAAGAAGCAATCAGTATATTTCACTTTTTTTTCCCGTAATTTCTCATGAACTAATGCGTGAATTCGTATTGAGGAGATGGAGGTTGCTTATGTCCGGTGTCATAGTGGCACAAGAATGGAAACTAAAGTTTTGAACGATAAACAAGGAAGTCATGAAGCGCCGAAACCGAAACTGTCTAAATTCGGTTTTGATTTTACAAAAACTGTTTTGATTTTGGTTATTATTTTTTGTTTAATCGTTACGGTTTCTTTGTTTGTTTATTTCAGATGAGAACGGTGAGAGTTACTAATGTCTCCTTAAGCGTAACAGAGAAAGATTTGAGAGACTTTTTTTCTTTTTCCGGTGAAATTGAATTTGTCGAAATGCGAAAGTAAGTATGATTCATTCAATAATGTCTCTAAATTTTATTTTGGCTGTTTTTTAAGGTCGATGAGGATTTTTTTTTTTTCTGCTTCATTTTGGGCATTTTCATTTACTATATGTTGTGTTCTTGTATAGGGATACTGAGCGATCTCAACTTGCATTTGTTACCTTTAAGGATCCGAAAGGGGCAGAGACATCGATTCTACTCTCGGTTGATACATTCTTCTTTCTGTTACTTTCTTTATTTTGATTGGCCTTCATAGTCTGCAGATCTTCTGAACGATTTTATTCGATTATGTGCTTATATATTTAAACTTTCCTTAGAAATTGTTTCTTGGAAAGTAGAAATTTTCTTCTGTTATGAAAAATGGCTCTAAGGGATGCTACGTTTTGAATTTTATTCTTCAGAAAAGAGGAGATTTAACAAGTTTTTCGCATTTATTTCTTCAAGATTAAGATTAAGATGGGAGAAACTATTCAATCTGGTAGCCATGATTTGTTTAGTCACTTTTATATATAACTGTAGATTCATAGTTATTATTACTTTTAATTCCTTTCATACATCTAATAATGGAAAAATTCTTTATTTCTATGTCTCAAACTAAGTAATTTATTGGCTACCGCAACTGTCTGACAAAAACAAGTGAAAGAGACATCTTCCGTTCATATCGATTTTGGTTTTTCTACACCATATTTACATCTACCTCTTCTTGTGTCACAACGTTAACTTTTCTTAGAAGAAATTTGTGGTAGAGGCTTTTGCTTGTTTCATCTATTATCTTACCTAATTAAACTGTCTTGCATCTCCTAGGGAGCTACAATTGTTGATCAGCCAGTAAGCATTGCTTCTGCTCCAGATTACAACCTTCCTGCAGTTAATGCCAGTGCCCCTGTAGCCATGCCAGTTTCTACTCCAGTATTTTCAATCTTACCCTCAACGATATATTTTCAATCTTTGTTAATACAATTTCTTCTAACATGAATGAATAAACAATTTTCATCAGGCTACAGACAACACAAACTCCGGTACTTCTACTGCTGGATCTGCAATGCAAAAGGCAGAGGATGTTGTCAGCAGCATGCTGGCCAAAGGCTTCACTTTGGGCAAAGATGCCCTTAATAAGGCGAAGTCTTTTGATGAGAGACACCAATTGACTTCGACAGCCTCATCCAAAGTCGCTTCTCTCGACCAAAAGATTGGTCTTAGCGAGAAAATTAGTGTTGGCACAACGGTGGTGAATGAGAAAGTGAGGGAAATGGATGAGAAGTTTCAAGTGTCTGAGAAGACCAAGGCAGCTGTGAGCAATGCAGGATCAGCCATAATGACTAACCGCTATGTCTTAACCGGGGCTTCCTGGGTTAGCCAGACATTTCAAAGAGTCGCGAAAGCTGCTGTAGATGTTAGCCAGAAAACGAAGGAGAAGGTTTTAGTTGAGGATCAAGGGAAACATGTGGGAAATTCTTCTTAAAGTCATTCCAAGAATTGCTGCGCTCTAAATGTGTAGCCTTGACCATCCCAATATATAAATCATATATATTTGGCCAAAACAATGTGAGGACCAATTCTCTTAGCTTTCTATTTTCATCTCAGTTGTTTGATATATTTTTAATGCTTTATTTTAGTTTTAGTATTAAGGGAGTATACATATAAGCTACATCACATGCTTATGTTGTAATTCAATTGTAAGAAAAGCATATATTTATATATATATGCTATTATGTGATACCGGC

mRNA sequence

TTAAAATGAAAGAAACATAAGAAAGAAAATAAAAATAAAAATAAAATAAAAAAATAGAATCAGTCAGTTTCTTTTGTTTTGCCACATGTATTACTACGAACCTAAACAACCGCCAAGCCACACCACAACTCTCAAAGGCCATTCTTCCTTCTTCCTCTCCCCTCTCTAAGAATTTCGATTGGCAAACCTCTCAGGTGGATCAGACAGAATCATCATGGCAATGAGAACGGTGAGAGTTACTAATGTCTCCTTAAGCGTAACAGAGAAAGATTTGAGAGACTTTTTTTCTTTTTCCGGTGAAATTGAATTTGTCGAAATGCGAAAGGATACTGAGCGATCTCAACTTGCATTTGTTACCTTTAAGGATCCGAAAGGGGCAGAGACATCGATTCTACTCTCGGGAGCTACAATTGTTGATCAGCCAGTAAGCATTGCTTCTGCTCCAGATTACAACCTTCCTGCAGTTAATGCCAGTGCCCCTGTAGCCATGCCAGTTTCTACTCCAGCTACAGACAACACAAACTCCGGTACTTCTACTGCTGGATCTGCAATGCAAAAGGCAGAGGATGTTGTCAGCAGCATGCTGGCCAAAGGCTTCACTTTGGGCAAAGATGCCCTTAATAAGGCGAAGTCTTTTGATGAGAGACACCAATTGACTTCGACAGCCTCATCCAAAGTCGCTTCTCTCGACCAAAAGATTGGTCTTAGCGAGAAAATTAGTGTTGGCACAACGGTGGTGAATGAGAAAGTGAGGGAAATGGATGAGAAGTTTCAAGTGTCTGAGAAGACCAAGGCAGCTGTGAGCAATGCAGGATCAGCCATAATGACTAACCGCTATGTCTTAACCGGGGCTTCCTGGGTTAGCCAGACATTTCAAAGAGTCGCGAAAGCTGCTGTAGATGTTAGCCAGAAAACGAAGGAGAAGGTTTTAGTTGAGGATCAAGGGAAACATGTGGGAAATTCTTCTTAAAGTCATTCCAAGAATTGCTGCGCTCTAAATGTGTAGCCTTGACCATCCCAATATATAAATCATATATATTTGGCCAAAACAATGTGAGGACCAATTCTCTTAGCTTTCTATTTTCATCTCAGTTGTTTGATATATTTTTAATGCTTTATTTTAGTTTTAGTATTAAGGGAGTATACATATAAGCTACATCACATGCTTATGTTGTAATTCAATTGTAAGAAAAGCATATATTTATATATATATGCTATTATGTGATACCGGC

Coding sequence (CDS)

ATGGCAATGAGAACGGTGAGAGTTACTAATGTCTCCTTAAGCGTAACAGAGAAAGATTTGAGAGACTTTTTTTCTTTTTCCGGTGAAATTGAATTTGTCGAAATGCGAAAGGATACTGAGCGATCTCAACTTGCATTTGTTACCTTTAAGGATCCGAAAGGGGCAGAGACATCGATTCTACTCTCGGGAGCTACAATTGTTGATCAGCCAGTAAGCATTGCTTCTGCTCCAGATTACAACCTTCCTGCAGTTAATGCCAGTGCCCCTGTAGCCATGCCAGTTTCTACTCCAGCTACAGACAACACAAACTCCGGTACTTCTACTGCTGGATCTGCAATGCAAAAGGCAGAGGATGTTGTCAGCAGCATGCTGGCCAAAGGCTTCACTTTGGGCAAAGATGCCCTTAATAAGGCGAAGTCTTTTGATGAGAGACACCAATTGACTTCGACAGCCTCATCCAAAGTCGCTTCTCTCGACCAAAAGATTGGTCTTAGCGAGAAAATTAGTGTTGGCACAACGGTGGTGAATGAGAAAGTGAGGGAAATGGATGAGAAGTTTCAAGTGTCTGAGAAGACCAAGGCAGCTGTGAGCAATGCAGGATCAGCCATAATGACTAACCGCTATGTCTTAACCGGGGCTTCCTGGGTTAGCCAGACATTTCAAAGAGTCGCGAAAGCTGCTGTAGATGTTAGCCAGAAAACGAAGGAGAAGGTTTTAGTTGAGGATCAAGGGAAACATGTGGGAAATTCTTCTTAA

Protein sequence

MAMRTVRVTNVSLSVTEKDLRDFFSFSGEIEFVEMRKDTERSQLAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVNASAPVAMPVSTPATDNTNSGTSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLVEDQGKHVGNSS

Homology

[Close]

BLAST of Bhi10M001310 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 261.9 bits (668), Expect = 5.2e-70
Identity = 150/253 (59.29%), Postives = 193/253 (76.28%), Query Frame = 0


Query: 1   MAMRTVRVTNVSLSVTEKDLRDFFSFSGEIEFVEMRKDTERSQLAFVTFKDPKGAETSIL 60
           M M TV+V+NVSL  T++DL++FFSFSG+I ++E + +TER++LA+VTFKD +GAET++L
Sbjct: 1   MTMTTVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVL 60

Query: 61  LSGATIVDQPVSIASAPDYNLPAVNASAPVAMPVSTPATDNTNSGTSTAGSAMQKAEDVV 120
           LSGATIVD  V ++ APDY L      +P A+    P   ++N       S ++KAEDVV
Sbjct: 61  LSGATIVDSSVIVSMAPDYQL------SPEALASLEP--KDSNKSPKAGDSVLRKAEDVV 120

Query: 121 SSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVR 180
           SSMLAKGF LGKDA+ KAKS DE+HQLTSTAS+KVAS D+KIG ++KI+ GT VV EKVR
Sbjct: 121 SSMLAKGFILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGTVVVGEKVR 180

Query: 181 EMDEKFQVSEKTKAA-------VSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQK 240
           E+D+K+QVSEKTK+A       VSNAGSAIM NRYVLTGA+WV+  F +VAKAA +V QK
Sbjct: 181 EVDQKYQVSEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVAKAAEEVGQK 240

Query: 241 TKEKV-LVEDQGK 246
            KEKV + E++ K
Sbjct: 241 AKEKVGMAEEEDK 245

[Close]

BLAST of Bhi10M001310 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 251.1 bits (640), Expect = 9.1e-67
Identity = 143/251 (56.97%), Postives = 194/251 (77.29%), Query Frame = 0


Query: 1   MAMRTVRVTNVSLSVTEKDLRDFFSFSGEIEFVEMRKDTERSQLAFVTFKDPKGAETSIL 60
           M+M TV+V+NVSL  TE+DL++FFSFSG+I ++E + + + S+LA+VTFKD +GAET++L
Sbjct: 1   MSMVTVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVL 60

Query: 61  LSGATIVDQPVSIASAPDYNLPAVNASAPVAMPVSTPATDNTNSGTSTAGSAMQKAEDVV 120
           L+G+TIVD  V++  +PDY LP  +A A +    S   ++ ++S T    S  +KAEDVV
Sbjct: 61  LTGSTIVDSSVTVTMSPDYQLPP-DALASIE---SLKESNKSSSPTREDVSVFRKAEDVV 120

Query: 121 SSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVR 180
           S M++KGF LGKDA+ KAKS DE+HQLTSTAS++V S D++IG +EKI+ GTTVV+EKV+
Sbjct: 121 SGMISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTGTTVVSEKVK 180

Query: 181 EMDEKFQVSEKTKAA-------VSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQK 240
           E+D+KFQV+EKTK+A       VSNAGSAIM NRYVLTGA+WV+  F RV+KAA +V QK
Sbjct: 181 EVDQKFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVSKAAEEVGQK 240

Query: 241 TKEKV-LVEDQ 244
            KEKV L E++
Sbjct: 241 AKEKVGLAEEE 247

[Close]

BLAST of Bhi10M001310 vs. TAIR 10
Match: AT5G16840.2 (binding partner of acd11 1 )

HSP 1 Score: 231.5 bits (589), Expect = 7.5e-61
Identity = 133/246 (54.07%), Postives = 178/246 (72.36%), Query Frame = 0


Query: 3   MRTVRVTNVSLSVTEKDLRDFFSFSGEIEFVEMRKDTERSQLAFVTFKDPKGAETSILLS 62
           +R+V+V N+S   TE D+++FFSFSGE+E ++++   E S  A+VTFK+ +GAET++LLS
Sbjct: 5   VRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSSNEHS--AYVTFKETQGAETAVLLS 64

Query: 63  GATIVDQPVSIASAPDYNLPAVNASAPVAMPVSTPATDNTNSGTSTAGSAMQKAEDVVSS 122
           GA+I DQ V I  AP+Y               S PA  +  + +S A S +QKAEDVVSS
Sbjct: 65  GASIADQSVIIELAPNY---------------SPPAAPHAETQSSGAESVVQKAEDVVSS 124

Query: 123 MLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREM 182
           MLAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++ +
Sbjct: 125 MLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAV 184

Query: 183 DEKFQVSEKTKA-------AVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTK 242
           D+ FQV+E+TK+        VS+AGSA+M NRYVLTG SW +  F RVA+AA +V QKTK
Sbjct: 185 DQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTK 233

[Close]

BLAST of Bhi10M001310 vs. TAIR 10
Match: AT5G16840.3 (binding partner of acd11 1 )

HSP 1 Score: 230.7 bits (587), Expect = 1.3e-60
Identity = 133/248 (53.63%), Postives = 179/248 (72.18%), Query Frame = 0


Query: 1   MAMRTVRVTNVSLSVTEKDLRDFFSFSGEIEFVEMRKDTERSQLAFVTFKDPKGAETSIL 60
           MA+R+V+V N+S   TE D+++FFSFSGE+E ++++ +      A+VTFK+ +GAET++L
Sbjct: 1   MAVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSN---EHSAYVTFKETQGAETAVL 60

Query: 61  LSGATIVDQPVSIASAPDYNLPAVNASAPVAMPVSTPATDNTNSGTSTAGSAMQKAEDVV 120
           LSGA+I DQ V I  AP+Y               S PA  +  + +S A S +QKAEDVV
Sbjct: 61  LSGASIADQSVIIELAPNY---------------SPPAAPHAETQSSGAESVVQKAEDVV 120

Query: 121 SSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVR 180
           SSMLAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++
Sbjct: 121 SSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIK 180

Query: 181 EMDEKFQVSEKTKA-------AVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQK 240
            +D+ FQV+E+TK+        VS+AGSA+M NRYVLTG SW +  F RVA+AA +V QK
Sbjct: 181 AVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQK 230

Query: 241 TKEKVLVE 242
           TKEKV  E
Sbjct: 241 TKEKVEAE 230

[Close]

BLAST of Bhi10M001310 vs. TAIR 10
Match: AT5G16840.1 (binding partner of acd11 1 )

HSP 1 Score: 227.6 bits (579), Expect = 1.1e-59
Identity = 131/246 (53.25%), Postives = 177/246 (71.95%), Query Frame = 0


Query: 3   MRTVRVTNVSLSVTEKDLRDFFSFSGEIEFVEMRKDTERSQLAFVTFKDPKGAETSILLS 62
           +R+V+V N+S   TE D+++FFSFSGE+E ++++ +      A+VTFK+ +GAET++LLS
Sbjct: 5   VRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSN---EHSAYVTFKETQGAETAVLLS 64

Query: 63  GATIVDQPVSIASAPDYNLPAVNASAPVAMPVSTPATDNTNSGTSTAGSAMQKAEDVVSS 122
           GA+I DQ V I  AP+Y               S PA  +  + +S A S +QKAEDVVSS
Sbjct: 65  GASIADQSVIIELAPNY---------------SPPAAPHAETQSSGAESVVQKAEDVVSS 124

Query: 123 MLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREM 182
           MLAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++ +
Sbjct: 125 MLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAV 184

Query: 183 DEKFQVSEKTKA-------AVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTK 242
           D+ FQV+E+TK+        VS+AGSA+M NRYVLTG SW +  F RVA+AA +V QKTK
Sbjct: 185 DQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTK 232

[Close]

BLAST of Bhi10M001310 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.5e-58
Identity = 131/246 (53.25%), Postives = 177/246 (71.95%), Query Frame = 0


Query: 3   MRTVRVTNVSLSVTEKDLRDFFSFSGEIEFVEMRKDTERSQLAFVTFKDPKGAETSILLS 62
           +R+V+V N+S   TE D+++FFSFSGE+E ++++ +      A+VTFK+ +GAET++LLS
Sbjct: 5   VRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSN---EHSAYVTFKETQGAETAVLLS 64

Query: 63  GATIVDQPVSIASAPDYNLPAVNASAPVAMPVSTPATDNTNSGTSTAGSAMQKAEDVVSS 122
           GA+I DQ V I  AP+Y               S PA  +  + +S A S +QKAEDVVSS
Sbjct: 65  GASIADQSVIIELAPNY---------------SPPAAPHAETQSSGAESVVQKAEDVVSS 124

Query: 123 MLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREM 182
           MLAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++ +
Sbjct: 125 MLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAV 184

Query: 183 DEKFQVSEKTKA-------AVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTK 242
           D+ FQV+E+TK+        VS+AGSA+M NRYVLTG SW +  F RVA+AA +V QKTK
Sbjct: 185 DQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTK 232

[Close]

BLAST of Bhi10M001310 vs. ExPASy Swiss-Prot
Match: P87216 (Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vip1 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.6e-07
Identity = 54/188 (28.72%), Postives = 84/188 (44.68%), Query Frame = 0


Query: 6   VRVTNVSLSVTEKDLRDFFSFSGEIEFVEMRKDTERSQLAFVTFKDPKGAETSILLSGAT 65
           V VTN+S  VTEK + DFFSF G++  +   K  E +Q A + F+ P   +T++LL  A 
Sbjct: 5   VIVTNISPEVTEKQISDFFSFCGKVSNISTEKSGE-TQTAKIQFERPSATKTALLLQDAL 64

Query: 66  IVDQPVSIASAPDYNLPAVNASAPVAMPVSTPATDNTNSGTSTAGSAMQKAED-VVSSML 125
           +    + I S                   +   TD   +G   A     K    ++S +L
Sbjct: 65  LGQNKIQITSEDG---------------GAASTTDQGGAGGDQAARQEDKPRSAIISELL 124

Query: 126 AKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTV-VNEKVREMD 185
           ++G+ L    L K+   D+ + ++S     + S      LS   SV     V EK  E+D
Sbjct: 125 SRGYHLSDVTLEKSIQLDQSYGVSSKFKGILES-----ALSGVRSVNERYHVTEKANEVD 171

Query: 186 EKFQVSEK 192
            KF +S+K
Sbjct: 185 NKFAISDK 171

[Close]

BLAST of Bhi10M001310 vs. NCBI nr
Match: XP_038900617.1 (binding partner of ACD11 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 458.8 bits (1179), Expect = 3.1e-125
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0


Query: 1   MAMRTVRVTNVSLSVTEKDLRDFFSFSGEIEFVEMRKDTERSQLAFVTFKDPKGAETSIL 60
           MAMRTVRVTNVSLSVTEKDLRDFFSFSGEIEFVEMRKDTERSQLAFVTFKDPKGAETSIL
Sbjct: 1   MAMRTVRVTNVSLSVTEKDLRDFFSFSGEIEFVEMRKDTERSQLAFVTFKDPKGAETSIL 60

Query: 61  LSGATIVDQPVSIASAPDYNLPAVNASAPVAMPVSTPATDNTNSGTSTAGSAMQKAEDVV 120
           LSGATIVDQPVSIASAPDYNLPAVNASAPVAMPVSTPATDNTNSGTSTAGSAMQKAEDVV
Sbjct: 61  LSGATIVDQPVSIASAPDYNLPAVNASAPVAMPVSTPATDNTNSGTSTAGSAMQKAEDVV 120

Query: 121 SSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVR 180
           SSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVR
Sbjct: 121 SSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVR 180

Query: 181 EMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLV 240
           EMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLV
Sbjct: 181 EMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLV 240

Query: 241 EDQGKHVGNSS 252
           EDQGKHVGNSS
Sbjct: 241 EDQGKHVGNSS 251

[Close]

BLAST of Bhi10M001310 vs. NCBI nr
Match: XP_038900618.1 (binding partner of ACD11 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 455.7 bits (1171), Expect = 2.6e-124
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 3   MRTVRVTNVSLSVTEKDLRDFFSFSGEIEFVEMRKDTERSQLAFVTFKDPKGAETSILLS 62
           MRTVRVTNVSLSVTEKDLRDFFSFSGEIEFVEMRKDTERSQLAFVTFKDPKGAETSILLS
Sbjct: 1   MRTVRVTNVSLSVTEKDLRDFFSFSGEIEFVEMRKDTERSQLAFVTFKDPKGAETSILLS 60

Query: 63  GATIVDQPVSIASAPDYNLPAVNASAPVAMPVSTPATDNTNSGTSTAGSAMQKAEDVVSS 122
           GATIVDQPVSIASAPDYNLPAVNASAPVAMPVSTPATDNTNSGTSTAGSAMQKAEDVVSS
Sbjct: 61  GATIVDQPVSIASAPDYNLPAVNASAPVAMPVSTPATDNTNSGTSTAGSAMQKAEDVVSS 120

Query: 123 MLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREM 182
           MLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREM
Sbjct: 121 MLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREM 180

Query: 183 DEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLVED 242
           DEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLVED
Sbjct: 181 DEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLVED 240

Query: 243 QGKHVGNSS 252
           QGKHVGNSS
Sbjct: 241 QGKHVGNSS 249

[Close]

BLAST of Bhi10M001310 vs. NCBI nr
Match: KAA0042981.1 (binding partner of ACD11 1-like isoform X1 [Cucumis melo var. makuwa] >TYK11107.1 binding partner of ACD11 1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 425.6 bits (1093), Expect = 2.9e-115
Identity = 235/252 (93.25%), Postives = 241/252 (95.63%), Query Frame = 0


Query: 1   MAMRTVRVTNVSLSVTEKDLRDFFSFSGEIEFVEMRKDTERSQLAFVTFKDPKGAETSIL 60
           MA RTVRVTNVSLS TEKDLRDFFSFSGEIEFVEMR D ERSQLAFVTFKDPKGAETSIL
Sbjct: 1   MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSIL 60

Query: 61  LSGATIVDQPVSIASAPDYNLPAVNASAPVAMPVSTPATDNTNSGTSTAGSAMQKAEDVV 120
           LSGATIVDQPVSI+SAPDYNLPAV+ASAPVA+PVSTPA DNT S T+TAGSA+QK EDVV
Sbjct: 61  LSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVV 120

Query: 121 SSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVR 180
           SSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVR
Sbjct: 121 SSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVR 180

Query: 181 EMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLV 240
           EMDEKFQVSEKTKAAVSNAGSA+M NRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVL 
Sbjct: 181 EMDEKFQVSEKTKAAVSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLA 240

Query: 241 -EDQGKHVGNSS 252
            EDQGKHVGNSS
Sbjct: 241 EEDQGKHVGNSS 252

[Close]

BLAST of Bhi10M001310 vs. NCBI nr
Match: XP_004148092.1 (binding partner of ACD11 1 [Cucumis sativus] >KGN63397.1 hypothetical protein Csa_022121 [Cucumis sativus])

HSP 1 Score: 424.9 bits (1091), Expect = 5.0e-115
Identity = 239/253 (94.47%), Postives = 242/253 (95.65%), Query Frame = 0


Query: 1   MAMRTVRVTNVSLSVTEKDLRDFFSFSGEIEFVEMRKDTERSQLAFVTFKDPKGAETSIL 60
           MA RTVRVTNVSLS TEKDLRDFFSFSGEIEFVEMR D ERSQLAFVTFKD KGAETSIL
Sbjct: 1   MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSIL 60

Query: 61  LSGATIVDQPVSIASAPDYNLPAVNASAPVAMPVSTPATDNTNSGT-STAGSAMQKAEDV 120
           LSGATIVDQPVSI+SAPDYNLPAV+ASAPVA+PVSTPA DNT S T STAGSAMQKAEDV
Sbjct: 61  LSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALDNTTSTTNSTAGSAMQKAEDV 120

Query: 121 VSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKV 180
           VSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKV
Sbjct: 121 VSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKV 180

Query: 181 REMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVL 240
           REMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVL
Sbjct: 181 REMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVL 240

Query: 241 V-EDQGKHVGNSS 252
             EDQGKHVGNSS
Sbjct: 241 AEEDQGKHVGNSS 253

[Close]

BLAST of Bhi10M001310 vs. NCBI nr
Match: XP_016902374.1 (PREDICTED: binding partner of ACD11 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 388.3 bits (996), Expect = 5.1e-104
Identity = 214/229 (93.45%), Postives = 220/229 (96.07%), Query Frame = 0


Query: 24  FSFSGEIEFVEMRKDTERSQLAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPA 83
           FSFSGEIEFVEMR D ERSQLAFVTFKDPKGAETSILLSGATIVDQPVSI+SAPDYNLPA
Sbjct: 62  FSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPA 121

Query: 84  VNASAPVAMPVSTPATDNTNSGTSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDE 143
           V+ASAPVA+PVSTPA DNT S T+TAGSA+QK EDVVSSMLAKGFTLGKDALNKAKSFDE
Sbjct: 122 VDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDE 181

Query: 144 RHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAI 203
           RHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSA+
Sbjct: 182 RHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAL 241

Query: 204 MTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLV-EDQGKHVGNSS 252
           M NRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVL  EDQGKHVGNSS
Sbjct: 242 MANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS 290

[Close]

BLAST of Bhi10M001310 vs. ExPASy TrEMBL
Match: A0A5A7TN24 (Binding partner of ACD11 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold66G00080 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.4e-115
Identity = 235/252 (93.25%), Postives = 241/252 (95.63%), Query Frame = 0


Query: 1   MAMRTVRVTNVSLSVTEKDLRDFFSFSGEIEFVEMRKDTERSQLAFVTFKDPKGAETSIL 60
           MA RTVRVTNVSLS TEKDLRDFFSFSGEIEFVEMR D ERSQLAFVTFKDPKGAETSIL
Sbjct: 1   MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSIL 60

Query: 61  LSGATIVDQPVSIASAPDYNLPAVNASAPVAMPVSTPATDNTNSGTSTAGSAMQKAEDVV 120
           LSGATIVDQPVSI+SAPDYNLPAV+ASAPVA+PVSTPA DNT S T+TAGSA+QK EDVV
Sbjct: 61  LSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVV 120

Query: 121 SSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVR 180
           SSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVR
Sbjct: 121 SSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVR 180

Query: 181 EMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLV 240
           EMDEKFQVSEKTKAAVSNAGSA+M NRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVL 
Sbjct: 181 EMDEKFQVSEKTKAAVSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLA 240

Query: 241 -EDQGKHVGNSS 252
            EDQGKHVGNSS
Sbjct: 241 EEDQGKHVGNSS 252

[Close]

BLAST of Bhi10M001310 vs. ExPASy TrEMBL
Match: A0A0A0LRG1 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G437070 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.4e-115
Identity = 239/253 (94.47%), Postives = 242/253 (95.65%), Query Frame = 0


Query: 1   MAMRTVRVTNVSLSVTEKDLRDFFSFSGEIEFVEMRKDTERSQLAFVTFKDPKGAETSIL 60
           MA RTVRVTNVSLS TEKDLRDFFSFSGEIEFVEMR D ERSQLAFVTFKD KGAETSIL
Sbjct: 1   MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSIL 60

Query: 61  LSGATIVDQPVSIASAPDYNLPAVNASAPVAMPVSTPATDNTNSGT-STAGSAMQKAEDV 120
           LSGATIVDQPVSI+SAPDYNLPAV+ASAPVA+PVSTPA DNT S T STAGSAMQKAEDV
Sbjct: 61  LSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALDNTTSTTNSTAGSAMQKAEDV 120

Query: 121 VSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKV 180
           VSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKV
Sbjct: 121 VSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKV 180

Query: 181 REMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVL 240
           REMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVL
Sbjct: 181 REMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVL 240

Query: 241 V-EDQGKHVGNSS 252
             EDQGKHVGNSS
Sbjct: 241 AEEDQGKHVGNSS 253

[Close]

BLAST of Bhi10M001310 vs. ExPASy TrEMBL
Match: A0A1S4E2B3 (binding partner of ACD11 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498392 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.5e-104
Identity = 214/229 (93.45%), Postives = 220/229 (96.07%), Query Frame = 0


Query: 24  FSFSGEIEFVEMRKDTERSQLAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPA 83
           FSFSGEIEFVEMR D ERSQLAFVTFKDPKGAETSILLSGATIVDQPVSI+SAPDYNLPA
Sbjct: 62  FSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPA 121

Query: 84  VNASAPVAMPVSTPATDNTNSGTSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDE 143
           V+ASAPVA+PVSTPA DNT S T+TAGSA+QK EDVVSSMLAKGFTLGKDALNKAKSFDE
Sbjct: 122 VDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDE 181

Query: 144 RHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAI 203
           RHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSA+
Sbjct: 182 RHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAL 241

Query: 204 MTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLV-EDQGKHVGNSS 252
           M NRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVL  EDQGKHVGNSS
Sbjct: 242 MANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS 290

[Close]

BLAST of Bhi10M001310 vs. ExPASy TrEMBL
Match: A0A6J1L7W4 (binding partner of ACD11 1-like OS=Cucurbita maxima OX=3661 GN=LOC111499987 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 5.2e-102
Identity = 210/248 (84.68%), Postives = 227/248 (91.53%), Query Frame = 0


Query: 3   MRTVRVTNVSLSVTEKDLRDFFSFSGEIEFVEMRKDTERSQLAFVTFKDPKGAETSILLS 62
           +RTVRVTNVSLS +EKDLRDFFSFSGEIEFVEMRKD ERSQ+AFVTFKD KGAETSILLS
Sbjct: 5   VRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLS 64

Query: 63  GATIVDQPVSIASAPDYNLPAVNASAPVAMPVSTPATDNTNSGTSTAGSAMQKAEDVVSS 122
           GATIVDQPVSIA+APDYNLPAV ASAP  +PVS+P+ +N  SG  TAGSAMQKAEDVVSS
Sbjct: 65  GATIVDQPVSIATAPDYNLPAVPASAP--LPVSSPSAENAGSG--TAGSAMQKAEDVVSS 124

Query: 123 MLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREM 182
           MLAKGFTLGKD LN+AKSFD++HQLTSTASSKV SLDQKIGLSEKISVGTTVVNEKV+EM
Sbjct: 125 MLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEM 184

Query: 183 DEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLVED 242
           DEKFQVSEKTKAAV+NAG+A+M NRYV TGASWV+QTFQRVAKAAV+VS KTKEKVL ED
Sbjct: 185 DEKFQVSEKTKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAED 244

Query: 243 QGKHVGNS 251
           Q K  G S
Sbjct: 245 QAKQEGRS 248

[Close]

BLAST of Bhi10M001310 vs. ExPASy TrEMBL
Match: A0A6J1G681 (binding partner of ACD11 1-like OS=Cucurbita moschata OX=3662 GN=LOC111451146 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 6.8e-102
Identity = 210/248 (84.68%), Postives = 227/248 (91.53%), Query Frame = 0


Query: 3   MRTVRVTNVSLSVTEKDLRDFFSFSGEIEFVEMRKDTERSQLAFVTFKDPKGAETSILLS 62
           +RTVRVTNVSLS +EKDLRDFFSFSGEIE VEMRKD ERSQ+AFVTFKDPKGAETSILLS
Sbjct: 5   VRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLS 64

Query: 63  GATIVDQPVSIASAPDYNLPAVNASAPVAMPVSTPATDNTNSGTSTAGSAMQKAEDVVSS 122
           GATIVDQPVSIASAPDY+LPAV ASAP  +PVS+P+ +N  SG  TAGSAM KAEDVVSS
Sbjct: 65  GATIVDQPVSIASAPDYSLPAVPASAP--LPVSSPSAENAGSG--TAGSAMNKAEDVVSS 124

Query: 123 MLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREM 182
           MLAKGFTLGKDALN+AKSFD++HQLTSTASSKV SLDQKIGLSEKISVGTTVVNEKV+EM
Sbjct: 125 MLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEM 184

Query: 183 DEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLVED 242
           DEKFQVSEKTKAAV+NAG+A+M NRYV TGASWV+QTFQRVAKAAV+VS KTKEKVL ED
Sbjct: 185 DEKFQVSEKTKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAED 244

Query: 243 QGKHVGNS 251
           Q K  G S
Sbjct: 245 QAKQEGRS 248

The following BLAST results are available for this feature:

BLAST of Bhi10M001310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17720.1	5.2e-70	59.29	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46870.1	9.1e-67	56.97	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G16840.2	7.5e-61	54.07	binding partner of acd11 1	[more]
AT5G16840.3	1.3e-60	53.63	binding partner of acd11 1	[more]
AT5G16840.1	1.1e-59	53.25	binding partner of acd11 1	[more]

BLAST of Bhi10M001310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	1.5e-58	53.25	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]
P87216	3.6e-07	28.72	Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN...	[more]

BLAST of Bhi10M001310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900617.1	3.1e-125	100.00	binding partner of ACD11 1-like isoform X1 [Benincasa hispida]	[more]
XP_038900618.1	2.6e-124	100.00	binding partner of ACD11 1-like isoform X2 [Benincasa hispida]	[more]
KAA0042981.1	2.9e-115	93.25	binding partner of ACD11 1-like isoform X1 [Cucumis melo var. makuwa] >TYK11107....	[more]
XP_004148092.1	5.0e-115	94.47	binding partner of ACD11 1 [Cucumis sativus] >KGN63397.1 hypothetical protein Cs...	[more]
XP_016902374.1	5.1e-104	93.45	PREDICTED: binding partner of ACD11 1-like isoform X1 [Cucumis melo]	[more]

BLAST of Bhi10M001310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TN24	1.4e-115	93.25	Binding partner of ACD11 1-like isoform X1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0LRG1	2.4e-115	94.47	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G437070 PE=4 SV...	[more]
A0A1S4E2B3	2.5e-104	93.45	binding partner of ACD11 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034983...	[more]
A0A6J1L7W4	5.2e-102	84.68	binding partner of ACD11 1-like OS=Cucurbita maxima OX=3661 GN=LOC111499987 PE=4...	[more]
A0A6J1G681	6.8e-102	84.68	binding partner of ACD11 1-like OS=Cucurbita moschata OX=3662 GN=LOC111451146 PE...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 5..74 e-value: 9.6E-12 score: 55.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 6..66 e-value: 6.0E-9 score: 35.6
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 4..78 score: 12.79911
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 2..74 e-value: 4.7E-12 score: 47.6
None	No IPR available	PANTHER	PTHR32343:SF37	BINDING PARTNER OF ACD11 1	coord: 1..245
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 1..245
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..76

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi10G001310	Bhi10G001310	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi10M001310.exon5	Bhi10M001310.exon5	exon
Bhi10M001310.exon4	Bhi10M001310.exon4	exon
Bhi10M001310.exon3	Bhi10M001310.exon3	exon
Bhi10M001310.exon2	Bhi10M001310.exon2	exon
Bhi10M001310.exon1	Bhi10M001310.exon1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi10M001310.utr3p1	Bhi10M001310.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi10M001310	cds.Bhi10M001310_5	CDS
cds.Bhi10M001310	cds.Bhi10M001310_4	CDS
cds.Bhi10M001310	cds.Bhi10M001310_3	CDS
cds.Bhi10M001310	cds.Bhi10M001310_2	CDS
cds.Bhi10M001310	cds.Bhi10M001310	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi10M001310.utr5p1	Bhi10M001310.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi10M001310	Bhi10M001310-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding