Bhi10M001047 (mRNA) Wax gourd (B227) v1

Overview
NameBhi10M001047
TypemRNA
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr10: 32153952 .. 32154115 (+)
Sequence length164
RNA-Seq ExpressionBhi10M001047
SyntenyBhi10M001047
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CGAAGGATGTAGCACATGGAGACGCCGATGTCAGTTATGAAGATAGGAAGTATGCAACAGGACCGCCGTCAGGGTGGACGGGAGGTGGTGTTGGCGGCGGCGGCGGCGTGTGGAGAGGAGGCAGGGGGAAGGGTGGCGGTAGAAAAGGAGGAGGCAGAAACTGA

mRNA sequence

CGAAGGATGTAGCACATGGAGACGCCGATGTCAGTTATGAAGATAGGAAGTATGCAACAGGACCGCCGTCAGGGTGGACGGGAGGTGGTGTTGGCGGCGGCGGCGGCGTGTGGAGAGGAGGCAGGGGGAAGGGTGGCGGTAGAAAAGGAGGAGGCAGAAACTGA

Coding sequence (CDS)

CGAAGGATGTAGCACATGGAGACGCCGATGTCAGTTATGAAGATAGGAAGTATGCAACAGGACCGCCGTCAGGGTGGACGGGAGGTGGTGTTGGCGGCGGCGGCGGCGTGTGGAGAGGAGGCAGGGGGAAGGGTGGCGGTAGAAAAGGAGGAGGCAGAAACTGA

Protein sequence

KDVAHGDADVSYEDRKYATGPPSGWTGGGVGGGGGVWRGGRGKGGGRKGGGRN
Homology
[Close]
BLAST of Bhi10M001047 vs. NCBI nr
Match: XP_031740553.1 (acanthoscurrin-1-like [Cucumis sativus])

HSP 1 Score: 71.6 bits (174), Expect = 2.3e-09
Identity = 43/53 (81.13%), Postives = 43/53 (81.13%), Query Frame = 0 

Query: 1  KDVAHGDADVSYEDRKYATGPPSGWTGGGVGGGGGVWRGGRGKGGGRKGGGRN 54
          KDVAH D D SYED KYATGPP GW G G GGGGGVWRGG GKGGG KGGGRN
Sbjct: 37 KDVAHVDNDGSYEDGKYATGPPPGWGGFGGGGGGGVWRGGGGKGGGGKGGGRN 89

The following BLAST results are available for this feature:
BLAST of Bhi10M001047 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi10M001047 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi10M001047 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031740553.12.3e-0981.13acanthoscurrin-1-like [Cucumis sativus][more]
BLAST of Bhi10M001047 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..53

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi10G001047Bhi10G001047gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi10M001047.exon1Bhi10M001047.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi10M001047cds.Bhi10M001047CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi10M001047Bhi10M001047-proteinpolypeptide