Bhi10M000857 (mRNA) Wax gourd (B227) v1

Overview


Name	Bhi10M000857
Type	mRNA
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	transcription factor bHLH162-like
Location	chr10: 23485300 .. 23487081 (-)
Sequence length	840
RNA-Seq Expression	Bhi10M000857
Synteny	Bhi10M000857

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTTCTTACATTTGATTCTTATTCTTATTCTTATTCTTATTATTATTTCATGGCGGAAAATCGTGAGTTGAACTCACAAAATAACAAAGTTGAAAGAAAGGTGATGGAGAAAAATCGCAGAAACAAAATGAAATCACTTTACACCAACTTGAATTCCCTCCTCCCAATCTCTCACTCAAATGTTTGTTTTTTTTTTTTTAATTTTCTTTTTGTATCTTTATCTTTTTTTTCCCATTTATTATTACAGTATTAATGGTGCCCTTTTTTCACTAAAAAATGTAGGAACTACCACTAACCGTGTTGGACCAGATAGACAAAGCAATAAAGTACATTAAATCATTGGAGATAAACTTGAAGAAGGATGAGGAGAAGAAGGAGAGACTTTTGAGAAAGTCGAAATTGTCGTCGTCGTCGTCGTCATACACAGCATTGTCGATGAGCCCGAATAGGAATGTACCTGAACTGAAAATCAAAGAAATGGGTTCTGCTGTGGAGGTGGTTTTAACGACTGGGTTGGAGGATCGGTCTATATTTTATGAGATTATTCGTATCTTTGATGAGGAGAGAGTCGAGATCATCAATATTAGTTATTCCATTCTAGAAAATACCATCATATATTCACTCCACACTGAGGTATATGTTCAAAAAAATTTCTAGCATACTACGGTAGTATAACTTCATTTATTGAATGCCCATATATAAAAAACATTTAAGAATTGTGTGAATAACGTGCTTAATGAAAGGAGTAAGGTACTAGATTTTTTTTTTCCAGGCATATTCCTAATCTATTAAACCTGTTTGATAAGCATGAAAAAACCTTCATTATTATAAACAAATTAAGTATTTAAAAATTATGTGACATGTGACAATCTAGTGGAAGGAGTATGTGTGCCTATGTAACATTAGAAATTTTCAATTGTTTTGAAAACTCTGCTTCTTTTCCATGATTTTCTAACTATATAGTTTTTTCTTGTTTTATATTGTTTCAAAACATTTTTTTTTTCAAGACTTTTTTAGTTTTCAAAGTTAGAATTTTAAAAACACTCATAAAAAGGTATATGATAAAACAAAAGAGTTCAATAAGTGTAAGTATTCTTTGTAAATTACTTAATTTTTTTTTTAAACTAATTGAATATCAAATACATATCTTAGGTTTCGTTTGATAATGATTTTGATTTTAGTTTTCTTGTTTTTAAAATTAATGGTTGTTTTCTTTCATAAACAATTAAATTTTTCGTTGAATTCTAAAAATAAGATAAAGTACTTGAAAACTTCTTTTTTTTTTTTTAGCTTTCAAATTTTTGCTTATTTTTTAGAATATTAGTAAAAATTGAATAATAATGAAATAAATAAACTCATAGTTATGAAGTAGTGTTTACAAATTTAAATTTTTAAAAGATATAAAACAAATATCATGAAATAAAAATGAACTAAAATGATTGTTTTTTTTTTTTTATGGTTATTATGGGAGTAGATTGAAGACGTGGTGTATGAATTTGGAGGAACAAAACTGATAGAGAGACTAAAAAAATTGGTTCACGAACCCAACAATGATCCAGAAATACAGGCGGTGGCAGTTTCCAGCAGTCACGGCGGAACCAATTTTCCGGCGGACGTTCCGACGATGAGTTCCGATTACAATTTTTGGAGCCACTAGATATTTGAAGAAAAAATTTAATTATTATATGCATGTTGTCCTACGCTGAGCAACATGTTACCACTCATTATTGAAGGATATTCAATACATAGCCACTGTGTTTCTTTGTCTAATTAAACTTCA

mRNA sequence

TTCTTTCTTACATTTGATTCTTATTCTTATTCTTATTCTTATTATTATTTCATGGCGGAAAATCGTGAGTTGAACTCACAAAATAACAAAGTTGAAAGAAAGGTGATGGAGAAAAATCGCAGAAACAAAATGAAATCACTTTACACCAACTTGAATTCCCTCCTCCCAATCTCTCACTCAAATGAACTACCACTAACCGTGTTGGACCAGATAGACAAAGCAATAAAGTACATTAAATCATTGGAGATAAACTTGAAGAAGGATGAGGAGAAGAAGGAGAGACTTTTGAGAAAGTCGAAATTGTCGTCGTCGTCGTCGTCATACACAGCATTGTCGATGAGCCCGAATAGGAATGTACCTGAACTGAAAATCAAAGAAATGGGTTCTGCTGTGGAGGTGGTTTTAACGACTGGGTTGGAGGATCGGTCTATATTTTATGAGATTATTCGTATCTTTGATGAGGAGAGAGTCGAGATCATCAATATTAGTTATTCCATTCTAGAAAATACCATCATATATTCACTCCACACTGAGATTGAAGACGTGGTGTATGAATTTGGAGGAACAAAACTGATAGAGAGACTAAAAAAATTGGTTCACGAACCCAACAATGATCCAGAAATACAGGCGGTGGCAGTTTCCAGCAGTCACGGCGGAACCAATTTTCCGGCGGACGTTCCGACGATGAGTTCCGATTACAATTTTTGGAGCCACTAGATATTTGAAGAAAAAATTTAATTATTATATGCATGTTGTCCTACGCTGAGCAACATGTTACCACTCATTATTGAAGGATATTCAATACATAGCCACTGTGTTTCTTTGTCTAATTAAACTTCA

Coding sequence (CDS)

ATGGCGGAAAATCGTGAGTTGAACTCACAAAATAACAAAGTTGAAAGAAAGGTGATGGAGAAAAATCGCAGAAACAAAATGAAATCACTTTACACCAACTTGAATTCCCTCCTCCCAATCTCTCACTCAAATGAACTACCACTAACCGTGTTGGACCAGATAGACAAAGCAATAAAGTACATTAAATCATTGGAGATAAACTTGAAGAAGGATGAGGAGAAGAAGGAGAGACTTTTGAGAAAGTCGAAATTGTCGTCGTCGTCGTCGTCATACACAGCATTGTCGATGAGCCCGAATAGGAATGTACCTGAACTGAAAATCAAAGAAATGGGTTCTGCTGTGGAGGTGGTTTTAACGACTGGGTTGGAGGATCGGTCTATATTTTATGAGATTATTCGTATCTTTGATGAGGAGAGAGTCGAGATCATCAATATTAGTTATTCCATTCTAGAAAATACCATCATATATTCACTCCACACTGAGATTGAAGACGTGGTGTATGAATTTGGAGGAACAAAACTGATAGAGAGACTAAAAAAATTGGTTCACGAACCCAACAATGATCCAGAAATACAGGCGGTGGCAGTTTCCAGCAGTCACGGCGGAACCAATTTTCCGGCGGACGTTCCGACGATGAGTTCCGATTACAATTTTTGGAGCCACTAG

Protein sequence

MAENRELNSQNNKVERKVMEKNRRNKMKSLYTNLNSLLPISHSNELPLTVLDQIDKAIKYIKSLEINLKKDEEKKERLLRKSKLSSSSSSYTALSMSPNRNVPELKIKEMGSAVEVVLTTGLEDRSIFYEIIRIFDEERVEIINISYSILENTIIYSLHTEIEDVVYEFGGTKLIERLKKLVHEPNNDPEIQAVAVSSSHGGTNFPADVPTMSSDYNFWSH

Homology

[Close]

BLAST of Bhi10M000857 vs. TAIR 10
Match: AT4G20970.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 112.5 bits (280), Expect = 4.5e-25
Identity = 75/190 (39.47%), Postives = 122/190 (64.21%), Query Frame = 0


Query: 1   MAENRELNSQNNKVERKVMEKNRRNKMKSLYTNLNSLLPISHSNELPLTVLDQIDKAIKY 60
           M  +     Q+  V+RK +EKNRR +MKSLY+ L SLLP  HS+  PLT+ DQ+D+A  Y
Sbjct: 1   MEPSHSNTGQSRSVDRKTVEKNRRMQMKSLYSELISLLP-HHSSTEPLTLPDQLDEAANY 60

Query: 61  IKSLEINLKKDEEKKERL-----LRKSKLSSSSSSYTALSMSPNRNVPELKIKEMGSAVE 120
           IK L++N++K  E+K  L     L K     SSS  +++ +S  R +P+++I+E GS   
Sbjct: 61  IKKLQVNVEKKRERKRNLVATTTLEKLNSVGSSSVSSSVDVSVPRKLPKIEIQETGSIFH 120

Query: 121 VVLTTGLEDRSIFYEIIRIFDEE-RVEIINISYSILENTIIYSLHTEIEDVVYEFGG-TK 180
           + L T LE + +F EIIR+  EE   EI +  YSI+++ + ++LH ++E+  +++G  ++
Sbjct: 121 IFLVTSLEHKFMFCEIIRVLTEELGAEITHAGYSIVDDAVFHTLHCKVEE--HDYGARSQ 180

Query: 181 LIERLKKLVH 184
           + ERL+K+V+
Sbjct: 181 IPERLEKIVN 187

[Close]

BLAST of Bhi10M000857 vs. TAIR 10
Match: AT5G51780.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 49.3 bits (116), Expect = 4.6e-06
Identity = 46/176 (26.14%), Postives = 98/176 (55.68%), Query Frame = 0


Query: 13  KVERKVMEKNRRNKMKSLYTNLNSLLPISHSNELPLTVLDQIDKAIKYIKSLEINLKKDE 72
           K+  +  E+ RR +M SLY +L SLLP+ H  +   +  DQ+++A+ YIK L+  +K+  
Sbjct: 3   KMMHRETERQRRQEMASLYASLRSLLPL-HFIKGKRSTSDQVNEAVNYIKYLQRKIKELS 62

Query: 73  EKKERLL---RKSKLSSSSSSYTA-LSMSPNRNVPELKIKEMGSAVEVVLTT---GLEDR 132
            +++ L+   R S L SS+  +   + M   +N   + +++    VE++L++   G + R
Sbjct: 63  VRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKN--HVVVRQCLVGVEIMLSSRCCGGQPR 122

Query: 133 SIFYEIIRIFDEERVEIINISYSILENTIIYSLHTEIEDVVYEFGGTKLIERLKKL 182
             F  ++++  E  + ++N   SI+++ ++Y++  E+ D+       +L +RL ++
Sbjct: 123 --FSSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVNDMALMIDLAELEKRLIRM 173

[Close]

BLAST of Bhi10M000857 vs. TAIR 10
Match: AT1G10585.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 46.6 bits (109), Expect = 3.0e-05
Identity = 47/179 (26.26%), Postives = 95/179 (53.07%), Query Frame = 0


Query: 6   ELNSQNNKVERKVMEKNRRNKMKSLYTNLNSLLPISHSNELPLTVLDQIDKAIKYIKSLE 65
           E NS + + +R + EK+RR +MK L++ L+S   +S + +LP+  L  ID+A  Y+  L+
Sbjct: 9   EGNSSSLREQRNLREKDRRMRMKHLFSILSS--HVSPTRKLPVPHL--IDQATSYMIQLK 68

Query: 66  INLKKDEEKKERLLRKSKLSSSSSSYTALSMSPNRNVPELKIKEMGSAVEVVLTTGLE-D 125
            N+   +EKK  LL+    +    S+          +P+L I+   S +E+ L   L   
Sbjct: 69  ENVNYLKEKKRTLLQGELGNLYEGSFL---------LPKLSIRSRDSTIEMNLIMDLNMK 128

Query: 126 RSIFYEIIRIFDEERVEIINISYSILENTIIYSLHTEIEDVVYEFGGTKLIERLKKLVH 184
           R + +E++ IF+EE  ++++ +   L +   Y++  +          +++ ER++K+++
Sbjct: 129 RVMLHELVSIFEEEGAQVMSANLQNLNDRTTYTIIAQAIISRIGIDPSRIEERVRKIIY 174

[Close]

BLAST of Bhi10M000857 vs. TAIR 10
Match: AT3G56980.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 42.4 bits (98), Expect = 5.7e-04
Identity = 46/190 (24.21%), Postives = 91/190 (47.89%), Query Frame = 0


Query: 13  KVERKVMEKNRRNKMKSLYTNLNSLLPISHSNELPLTVLDQIDKAIKYIKSLEINLKKDE 72
           K+     E++RR K+ SL+++L S LP S  ++  L++   + +++KYI  L+  +KK  
Sbjct: 78  KLNHNASERDRRRKINSLFSSLRSCLPASGQSK-KLSIPATVSRSLKYIPELQEQVKKLI 137

Query: 73  EKKERLLRKSKLSSSSSSYTALSMSPNRNVPELKIKEMGSAVEVVLTTGLEDRSIFYEI- 132
           +KKE LL   ++S   ++   +   P         K + + +  V  T L D  +  +I 
Sbjct: 138 KKKEELL--VQISGQRNTECYVKQPP---------KAVANYISTVSATRLGDNEVMVQIS 197

Query: 133 ------------IRIFDEERVEIINISYSILE-NTIIYSLHTEIEDVV-YEFGGTKLIER 188
                       +   +E+R  ++++S S  +   + Y+LH ++E +  Y+    +L +R
Sbjct: 198 SSKIHNFSISNVLSGLEEDRFVLVDMSSSRSQGERLFYTLHLQVEKIENYKLNCEELSQR 255

[Close]

BLAST of Bhi10M000857 vs. TAIR 10
Match: AT4G25400.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 41.6 bits (96), Expect = 9.7e-04
Identity = 43/153 (28.10%), Postives = 77/153 (50.33%), Query Frame = 0


Query: 13  KVERKVMEKNRRNKMKSLYTNLNSLLPISHSNELPLTVLDQIDKAIKYIKSLEINLKKDE 72
           K+  K +EK RR +M SLY +L SLLP+        T  DQ+  A+ YI  L+ N+K   
Sbjct: 3   KLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRST-SDQVKGAVNYIDYLQRNIKDIN 62

Query: 73  EKKERLLRKSKLSSSSSSYTALSMSPNRNVPELKIKEMGSAVEVVLTTGLEDRSIFYEII 132
            K++ L+  S  S  SS+    +   N  V    I+     +E+VL+     ++ F  ++
Sbjct: 63  SKRDDLVLLSGRSFRSSNEQEWNEISNHVV----IRPCLVGIEIVLSI---LQTPFSSVL 122

Query: 133 RIFDEERVEIINISYSILENTIIYSLHTEIEDV 166
           ++  E  + ++    S + + +I++L  E+ D+
Sbjct: 123 QVLREHGLYVLGYICSSVNDRLIHTLQAEVNDL 147

[Close]

BLAST of Bhi10M000857 vs. ExPASy Swiss-Prot
Match: F4JIJ7 (Transcription factor bHLH162 OS=Arabidopsis thaliana OX=3702 GN=BHLH162 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.3e-24
Identity = 75/190 (39.47%), Postives = 122/190 (64.21%), Query Frame = 0


Query: 1   MAENRELNSQNNKVERKVMEKNRRNKMKSLYTNLNSLLPISHSNELPLTVLDQIDKAIKY 60
           M  +     Q+  V+RK +EKNRR +MKSLY+ L SLLP  HS+  PLT+ DQ+D+A  Y
Sbjct: 1   MEPSHSNTGQSRSVDRKTVEKNRRMQMKSLYSELISLLP-HHSSTEPLTLPDQLDEAANY 60

Query: 61  IKSLEINLKKDEEKKERL-----LRKSKLSSSSSSYTALSMSPNRNVPELKIKEMGSAVE 120
           IK L++N++K  E+K  L     L K     SSS  +++ +S  R +P+++I+E GS   
Sbjct: 61  IKKLQVNVEKKRERKRNLVATTTLEKLNSVGSSSVSSSVDVSVPRKLPKIEIQETGSIFH 120

Query: 121 VVLTTGLEDRSIFYEIIRIFDEE-RVEIINISYSILENTIIYSLHTEIEDVVYEFGG-TK 180
           + L T LE + +F EIIR+  EE   EI +  YSI+++ + ++LH ++E+  +++G  ++
Sbjct: 121 IFLVTSLEHKFMFCEIIRVLTEELGAEITHAGYSIVDDAVFHTLHCKVEE--HDYGARSQ 180

Query: 181 LIERLKKLVH 184
           + ERL+K+V+
Sbjct: 181 IPERLEKIVN 187

[Close]

BLAST of Bhi10M000857 vs. ExPASy Swiss-Prot
Match: Q9FLI1 (Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 6.5e-05
Identity = 46/176 (26.14%), Postives = 98/176 (55.68%), Query Frame = 0


Query: 13  KVERKVMEKNRRNKMKSLYTNLNSLLPISHSNELPLTVLDQIDKAIKYIKSLEINLKKDE 72
           K+  +  E+ RR +M SLY +L SLLP+ H  +   +  DQ+++A+ YIK L+  +K+  
Sbjct: 3   KMMHRETERQRRQEMASLYASLRSLLPL-HFIKGKRSTSDQVNEAVNYIKYLQRKIKELS 62

Query: 73  EKKERLL---RKSKLSSSSSSYTA-LSMSPNRNVPELKIKEMGSAVEVVLTT---GLEDR 132
            +++ L+   R S L SS+  +   + M   +N   + +++    VE++L++   G + R
Sbjct: 63  VRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKN--HVVVRQCLVGVEIMLSSRCCGGQPR 122

Query: 133 SIFYEIIRIFDEERVEIINISYSILENTIIYSLHTEIEDVVYEFGGTKLIERLKKL 182
             F  ++++  E  + ++N   SI+++ ++Y++  E+ D+       +L +RL ++
Sbjct: 123 --FSSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVNDMALMIDLAELEKRLIRM 173

[Close]

BLAST of Bhi10M000857 vs. ExPASy Swiss-Prot
Match: F4I4E1 (Transcription factor bHLH167 OS=Arabidopsis thaliana OX=3702 GN=BHLH167 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 4.2e-04
Identity = 47/179 (26.26%), Postives = 95/179 (53.07%), Query Frame = 0


Query: 6   ELNSQNNKVERKVMEKNRRNKMKSLYTNLNSLLPISHSNELPLTVLDQIDKAIKYIKSLE 65
           E NS + + +R + EK+RR +MK L++ L+S   +S + +LP+  L  ID+A  Y+  L+
Sbjct: 9   EGNSSSLREQRNLREKDRRMRMKHLFSILSS--HVSPTRKLPVPHL--IDQATSYMIQLK 68

Query: 66  INLKKDEEKKERLLRKSKLSSSSSSYTALSMSPNRNVPELKIKEMGSAVEVVLTTGLE-D 125
            N+   +EKK  LL+    +    S+          +P+L I+   S +E+ L   L   
Sbjct: 69  ENVNYLKEKKRTLLQGELGNLYEGSFL---------LPKLSIRSRDSTIEMNLIMDLNMK 128

Query: 126 RSIFYEIIRIFDEERVEIINISYSILENTIIYSLHTEIEDVVYEFGGTKLIERLKKLVH 184
           R + +E++ IF+EE  ++++ +   L +   Y++  +          +++ ER++K+++
Sbjct: 129 RVMLHELVSIFEEEGAQVMSANLQNLNDRTTYTIIAQAIISRIGIDPSRIEERVRKIIY 174

[Close]

BLAST of Bhi10M000857 vs. NCBI nr
Match: XP_038902351.1 (transcription factor bHLH162-like [Benincasa hispida])

HSP 1 Score: 412.9 bits (1060), Expect = 1.7e-111
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MAENRELNSQNNKVERKVMEKNRRNKMKSLYTNLNSLLPISHSNELPLTVLDQIDKAIKY 60
           MAENRELNSQNNKVERKVMEKNRRNKMKSLYTNLNSLLPISHSNELPLTVLDQIDKAIKY
Sbjct: 1   MAENRELNSQNNKVERKVMEKNRRNKMKSLYTNLNSLLPISHSNELPLTVLDQIDKAIKY 60

Query: 61  IKSLEINLKKDEEKKERLLRKSKLSSSSSSYTALSMSPNRNVPELKIKEMGSAVEVVLTT 120
           IKSLEINLKKDEEKKERLLRKSKLSSSSSSYTALSMSPNRNVPELKIKEMGSAVEVVLTT
Sbjct: 61  IKSLEINLKKDEEKKERLLRKSKLSSSSSSYTALSMSPNRNVPELKIKEMGSAVEVVLTT 120

Query: 121 GLEDRSIFYEIIRIFDEERVEIINISYSILENTIIYSLHTEIEDVVYEFGGTKLIERLKK 180
           GLEDRSIFYEIIRIFDEERVEIINISYSILENTIIYSLHTEIEDVVYEFGGTKLIERLKK
Sbjct: 121 GLEDRSIFYEIIRIFDEERVEIINISYSILENTIIYSLHTEIEDVVYEFGGTKLIERLKK 180

Query: 181 LVHEPNNDPEIQAVAVSSSHGGTNFPADVPTMSSDYNFWSH 222
           LVHEPNNDPEIQAVAVSSSHGGTNFPADVPTMSSDYNFWSH
Sbjct: 181 LVHEPNNDPEIQAVAVSSSHGGTNFPADVPTMSSDYNFWSH 221

[Close]

BLAST of Bhi10M000857 vs. NCBI nr
Match: XP_038902350.1 (transcription factor bHLH162-like [Benincasa hispida])

HSP 1 Score: 329.3 bits (843), Expect = 2.5e-86
Identity = 179/209 (85.65%), Postives = 192/209 (91.87%), Query Frame = 0


Query: 13  KVERKVMEKNRRNKMKSLYTNLNSLLPISHSNELPLTVLDQIDKAIKYIKSLEINLKKDE 72
           K+ERKV+EKNRRNKMKSLY+NLNSLLP  HSN LPLTV +QI++ IK IKSLEI LKKDE
Sbjct: 87  KIERKVIEKNRRNKMKSLYSNLNSLLPTPHSN-LPLTVSEQIEEVIKSIKSLEIKLKKDE 146

Query: 73  EKKERLLRKSKLSSSSSSYTALSMSPNRNVPELKIKEMGSAVEVVLTTGLEDRSIFYEII 132
           EKKERLLRKSK+S SS SYTALS + NRNVPELKIKEMGSAVEVVLTTGLEDRSIFYEII
Sbjct: 147 EKKERLLRKSKMSLSSPSYTALSTNQNRNVPELKIKEMGSAVEVVLTTGLEDRSIFYEII 206

Query: 133 RIFDEERVEIINISYSILENTIIYSLHTEIEDVVYEFGGTKLIERLKKLVHEPNNDPEIQ 192
           RIF+EERVEIIN+SYS LE+TIIYSLH EIEDVVYEFGGTKLIERLKKLVHEPNNDPE+Q
Sbjct: 207 RIFNEERVEIINVSYSDLESTIIYSLHAEIEDVVYEFGGTKLIERLKKLVHEPNNDPELQ 266

Query: 193 AVAVSSSHGGTNFPADVPTMSSDYNFWSH 222
           AVAV SSHGGTNFPADV T SS YNFWS+
Sbjct: 267 AVAVFSSHGGTNFPADVLTTSSHYNFWSN 294

[Close]

BLAST of Bhi10M000857 vs. NCBI nr
Match: XP_022944108.1 (transcription factor bHLH162-like [Cucurbita moschata])

HSP 1 Score: 233.8 bits (595), Expect = 1.4e-57
Identity = 130/196 (66.33%), Postives = 155/196 (79.08%), Query Frame = 0


Query: 27  MKSLYTNLNSLLPISHSNELPLTVLDQIDKAIKYIKSLEINLKKDEEKKERLLRKSKLSS 86
           MKSLY+ LNSLLP  HSNELPL+VLDQI++AIKYIKSLE+ LKKDEEKKER  R+    S
Sbjct: 1   MKSLYSKLNSLLPTHHSNELPLSVLDQIEEAIKYIKSLELKLKKDEEKKERFTRR----S 60

Query: 87  SSSSYTALSMSPNRNVPELKIKEMGSAVEVVLTTGL-EDRSIFYEIIRIFDEERVEIINI 146
           SSSSY A + S NRN PEL+IKEMGSAVEVVL+TGL EDR IFYEII IF EER EI+N+
Sbjct: 61  SSSSYMAPTRSRNRNGPELRIKEMGSAVEVVLSTGLEEDRFIFYEIIHIFYEERAEIVNV 120

Query: 147 SYSILENTIIYSLHTEIEDVVYEFGGTKLIERLKKLVHEPNNDPEIQAVAVSSSHGGTNF 206
           SYS++ N+++YSL+ EIEDVVYEFG TK  ER+K+LV+   ND E++A   SSSHGG   
Sbjct: 121 SYSVVGNSVLYSLYAEIEDVVYEFGATKPTERIKRLVYGWENDAEMKAAGSSSSHGGIRR 180

Query: 207 PADVPTMSSDYNFWSH 222
           P + P+  SD  F+SH
Sbjct: 181 PGNGPSTCSDNQFYSH 192

[Close]

BLAST of Bhi10M000857 vs. NCBI nr
Match: XP_023512282.1 (transcription factor bHLH162-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 229.6 bits (584), Expect = 2.7e-56
Identity = 126/192 (65.62%), Postives = 150/192 (78.12%), Query Frame = 0


Query: 27  MKSLYTNLNSLLPISHSNELPLTVLDQIDKAIKYIKSLEINLKKDEEKKERLLRKSKLSS 86
           MK LY+ LNSLLP  HSNELPL+V DQI++AIKYIKSLE+ LKKDEEKKER  R+   SS
Sbjct: 1   MKLLYSKLNSLLPTHHSNELPLSVSDQIEEAIKYIKSLELKLKKDEEKKERFTRR---SS 60

Query: 87  SSSSYTALSMSPNRNVPELKIKEMGSAVEVVLTTGLEDRSIFYEIIRIFDEERVEIINIS 146
           SSSSY A + + NRN PEL+IKEMGS VEVVL+TGLEDR IFYEII IF EER EI+N+S
Sbjct: 61  SSSSYMAPTRTRNRNGPELRIKEMGSVVEVVLSTGLEDRFIFYEIIHIFYEERAEIVNVS 120

Query: 147 YSILENTIIYSLHTEIEDVVYEFGGTKLIERLKKLVHEPNNDPEIQAVAVSSSHGGTNFP 206
           YS++ N+++YSLH EIEDVVYEFG TK  ER+K+LV+   ND E++A   SSSHGG   P
Sbjct: 121 YSVVGNSVLYSLHAEIEDVVYEFGATKPTERIKRLVYGWENDAEMKAAGSSSSHGGIRRP 180

Query: 207 ADVPTMSSDYNF 219
            + P+  SD  F
Sbjct: 181 GNGPSTCSDNQF 189

[Close]

BLAST of Bhi10M000857 vs. NCBI nr
Match: KAA0062040.1 (transcription factor bHLH36-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 226.9 bits (577), Expect = 1.7e-55
Identity = 125/170 (73.53%), Postives = 146/170 (85.88%), Query Frame = 0


Query: 27  MKSLYTNLNSLLPISHSN-ELPLTVLDQIDKAIKYIKSLEINLKKDEEKKERLLRKSKLS 86
           MKSLY+ LNSLLP  HSN +LP TV DQI+ AI YIKSLEI LK+DEEKKER LR+SK++
Sbjct: 1   MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIA 60

Query: 87  S----SSSSYTALSMSPNRNVPELKIKEMGSAVEVVLTTGLEDRSIFYEIIRIFDEERVE 146
           S    SSSSY+ALS+S NRNVPELKIKEMGSAVEVVL TGLEDRS+FYE IRI +EER E
Sbjct: 61  SSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEERAE 120

Query: 147 IINISYSILENTIIYSLHTEIEDVVYEFGGTKLIERLKKLVHEPNNDPEI 192
           IIN+SYS+L++TI+YSLH EIEDVVY+FGG KLIERL +LV+EP N+ E+
Sbjct: 121 IINVSYSLLDDTILYSLHAEIEDVVYDFGGRKLIERLNQLVYEPKNEAEM 170

[Close]

BLAST of Bhi10M000857 vs. ExPASy TrEMBL
Match: A0A6J1FXP8 (transcription factor bHLH162-like OS=Cucurbita moschata OX=3662 GN=LOC111448656 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 6.9e-58
Identity = 130/196 (66.33%), Postives = 155/196 (79.08%), Query Frame = 0


Query: 27  MKSLYTNLNSLLPISHSNELPLTVLDQIDKAIKYIKSLEINLKKDEEKKERLLRKSKLSS 86
           MKSLY+ LNSLLP  HSNELPL+VLDQI++AIKYIKSLE+ LKKDEEKKER  R+    S
Sbjct: 1   MKSLYSKLNSLLPTHHSNELPLSVLDQIEEAIKYIKSLELKLKKDEEKKERFTRR----S 60

Query: 87  SSSSYTALSMSPNRNVPELKIKEMGSAVEVVLTTGL-EDRSIFYEIIRIFDEERVEIINI 146
           SSSSY A + S NRN PEL+IKEMGSAVEVVL+TGL EDR IFYEII IF EER EI+N+
Sbjct: 61  SSSSYMAPTRSRNRNGPELRIKEMGSAVEVVLSTGLEEDRFIFYEIIHIFYEERAEIVNV 120

Query: 147 SYSILENTIIYSLHTEIEDVVYEFGGTKLIERLKKLVHEPNNDPEIQAVAVSSSHGGTNF 206
           SYS++ N+++YSL+ EIEDVVYEFG TK  ER+K+LV+   ND E++A   SSSHGG   
Sbjct: 121 SYSVVGNSVLYSLYAEIEDVVYEFGATKPTERIKRLVYGWENDAEMKAAGSSSSHGGIRR 180

Query: 207 PADVPTMSSDYNFWSH 222
           P + P+  SD  F+SH
Sbjct: 181 PGNGPSTCSDNQFYSH 192

[Close]

BLAST of Bhi10M000857 vs. ExPASy TrEMBL
Match: A0A5D3BZ69 (Transcription factor bHLH36-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G002050 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 8.4e-56
Identity = 125/170 (73.53%), Postives = 146/170 (85.88%), Query Frame = 0


Query: 27  MKSLYTNLNSLLPISHSN-ELPLTVLDQIDKAIKYIKSLEINLKKDEEKKERLLRKSKLS 86
           MKSLY+ LNSLLP  HSN +LP TV DQI+ AI YIKSLEI LK+DEEKKER LR+SK++
Sbjct: 1   MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIA 60

Query: 87  S----SSSSYTALSMSPNRNVPELKIKEMGSAVEVVLTTGLEDRSIFYEIIRIFDEERVE 146
           S    SSSSY+ALS+S NRNVPELKIKEMGSAVEVVL TGLEDRS+FYE IRI +EER E
Sbjct: 61  SSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEERAE 120

Query: 147 IINISYSILENTIIYSLHTEIEDVVYEFGGTKLIERLKKLVHEPNNDPEI 192
           IIN+SYS+L++TI+YSLH EIEDVVY+FGG KLIERL +LV+EP N+ E+
Sbjct: 121 IINVSYSLLDDTILYSLHAEIEDVVYDFGGRKLIERLNQLVYEPKNEAEM 170

[Close]

BLAST of Bhi10M000857 vs. ExPASy TrEMBL
Match: A0A5A7V416 (Transcription factor bHLH36-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G003780 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 8.4e-56
Identity = 125/170 (73.53%), Postives = 146/170 (85.88%), Query Frame = 0


Query: 27  MKSLYTNLNSLLPISHSN-ELPLTVLDQIDKAIKYIKSLEINLKKDEEKKERLLRKSKLS 86
           MKSLY+ LNSLLP  HSN +LP TV DQI+ AI YIKSLEI LK+DEEKKER LR+SK++
Sbjct: 1   MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIA 60

Query: 87  S----SSSSYTALSMSPNRNVPELKIKEMGSAVEVVLTTGLEDRSIFYEIIRIFDEERVE 146
           S    SSSSY+ALS+S NRNVPELKIKEMGSAVEVVL TGLEDRS+FYE IRI +EER E
Sbjct: 61  SSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEERAE 120

Query: 147 IINISYSILENTIIYSLHTEIEDVVYEFGGTKLIERLKKLVHEPNNDPEI 192
           IIN+SYS+L++TI+YSLH EIEDVVY+FGG KLIERL +LV+EP N+ E+
Sbjct: 121 IINVSYSLLDDTILYSLHAEIEDVVYDFGGRKLIERLNQLVYEPKNEAEM 170

[Close]

BLAST of Bhi10M000857 vs. ExPASy TrEMBL
Match: A0A1S4DX24 (transcription factor bHLH36-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC107990944 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 8.4e-56
Identity = 125/170 (73.53%), Postives = 146/170 (85.88%), Query Frame = 0


Query: 27  MKSLYTNLNSLLPISHSN-ELPLTVLDQIDKAIKYIKSLEINLKKDEEKKERLLRKSKLS 86
           MKSLY+ LNSLLP  HSN +LP TV DQI+ AI YIKSLEI LK+DEEKKER LR+SK++
Sbjct: 1   MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIA 60

Query: 87  S----SSSSYTALSMSPNRNVPELKIKEMGSAVEVVLTTGLEDRSIFYEIIRIFDEERVE 146
           S    SSSSY+ALS+S NRNVPELKIKEMGSAVEVVL TGLEDRS+FYE IRI +EER E
Sbjct: 61  SSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEERAE 120

Query: 147 IINISYSILENTIIYSLHTEIEDVVYEFGGTKLIERLKKLVHEPNNDPEI 192
           IIN+SYS+L++TI+YSLH EIEDVVY+FGG KLIERL +LV+EP N+ E+
Sbjct: 121 IINVSYSLLDDTILYSLHAEIEDVVYDFGGRKLIERLNQLVYEPKNEAEM 170

[Close]

BLAST of Bhi10M000857 vs. ExPASy TrEMBL
Match: A0A1S4DX34 (transcription factor bHLH36-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC107990944 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.4e-55
Identity = 125/169 (73.96%), Postives = 145/169 (85.80%), Query Frame = 0


Query: 27  MKSLYTNLNSLLPISHSNELPLTVLDQIDKAIKYIKSLEINLKKDEEKKERLLRKSKLSS 86
           MKSLY+ LNSLLP  HSN LP TV DQI+ AI YIKSLEI LK+DEEKKER LR+SK++S
Sbjct: 1   MKSLYSKLNSLLPSHHSN-LPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIAS 60

Query: 87  ----SSSSYTALSMSPNRNVPELKIKEMGSAVEVVLTTGLEDRSIFYEIIRIFDEERVEI 146
               SSSSY+ALS+S NRNVPELKIKEMGSAVEVVL TGLEDRS+FYE IRI +EER EI
Sbjct: 61  SSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEERAEI 120

Query: 147 INISYSILENTIIYSLHTEIEDVVYEFGGTKLIERLKKLVHEPNNDPEI 192
           IN+SYS+L++TI+YSLH EIEDVVY+FGG KLIERL +LV+EP N+ E+
Sbjct: 121 INVSYSLLDDTILYSLHAEIEDVVYDFGGRKLIERLNQLVYEPKNEAEM 168

The following BLAST results are available for this feature:

BLAST of Bhi10M000857 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20970.1	4.5e-25	39.47	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G51780.1	4.6e-06	26.14	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G10585.1	3.0e-05	26.26	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G56980.1	5.7e-04	24.21	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G25400.1	9.7e-04	28.10	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of Bhi10M000857 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JIJ7	6.3e-24	39.47	Transcription factor bHLH162 OS=Arabidopsis thaliana OX=3702 GN=BHLH162 PE=1 SV=...	[more]
Q9FLI1	6.5e-05	26.14	Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1	[more]
F4I4E1	4.2e-04	26.26	Transcription factor bHLH167 OS=Arabidopsis thaliana OX=3702 GN=BHLH167 PE=2 SV=...	[more]

BLAST of Bhi10M000857 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902351.1	1.7e-111	100.00	transcription factor bHLH162-like [Benincasa hispida]	[more]
XP_038902350.1	2.5e-86	85.65	transcription factor bHLH162-like [Benincasa hispida]	[more]
XP_022944108.1	1.4e-57	66.33	transcription factor bHLH162-like [Cucurbita moschata]	[more]
XP_023512282.1	2.7e-56	65.63	transcription factor bHLH162-like [Cucurbita pepo subsp. pepo]	[more]
KAA0062040.1	1.7e-55	73.53	transcription factor bHLH36-like isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of Bhi10M000857 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FXP8	6.9e-58	66.33	transcription factor bHLH162-like OS=Cucurbita moschata OX=3662 GN=LOC111448656 ...	[more]
A0A5D3BZ69	8.4e-56	73.53	Transcription factor bHLH36-like isoform X1 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5A7V416	8.4e-56	73.53	Transcription factor bHLH36-like isoform X1 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S4DX24	8.4e-56	73.53	transcription factor bHLH36-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC107990...	[more]
A0A1S4DX34	1.4e-55	73.96	transcription factor bHLH36-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC107990...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 4..24
None	No IPR available	COILS	Coil	Coil	coord: 54..81
None	No IPR available	PANTHER	PTHR13935:SF63	HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN	coord: 8..189
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 17..70 e-value: 6.6E-4 score: 29.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 13..65 e-value: 3.3E-8 score: 33.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 11..64 score: 11.921834
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 2..91 e-value: 5.1E-8 score: 34.8
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 10..84
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 8..189

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi10G000857	Bhi10G000857	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi10M000857.exon3	Bhi10M000857.exon3	exon
Bhi10M000857.exon2	Bhi10M000857.exon2	exon
Bhi10M000857.exon1	Bhi10M000857.exon1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi10M000857.utr3p1	Bhi10M000857.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi10M000857	cds.Bhi10M000857_3	CDS
cds.Bhi10M000857	cds.Bhi10M000857_2	CDS
cds.Bhi10M000857	cds.Bhi10M000857	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi10M000857.utr5p1	Bhi10M000857.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi10M000857	Bhi10M000857-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:2000112	regulation of cellular macromolecule biosynthetic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003677	DNA binding