Bhi09M002668 (mRNA) Wax gourd (B227) v1

Overview


Name	Bhi09M002668
Type	mRNA
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr9: 83133914 .. 83134534 (+)
Sequence length	516
RNA-Seq Expression	Bhi09M002668
Synteny	Bhi09M002668

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTAAGCCAAAAGGGAAGAAGAAACGTGGAGAAACTTCTCTTATTCTTATAATGGAAGTCCTGGTTGGACTAAGTACTATTATTTTGTCTCCTCAACGTAAAGGTGAGTCCTTGTATTCGACCGGTAATGAGTCTAGTGTTATGAAAAATGTTGGTGAATCTGTTGAAACACTGCATGTTGAGTCTGTTAGTATTCTTAAAGTTCTTAAGGAAAATCGCATTGAACGAGAAATTAGAGTTTCAATTTTAACAAACCCAAACAATTTTGCTGAGGTGGGTACAAATGTTGTTGACAATGTTCTAAATCCTGAGGAGAATGTTTCGATTCTTTAATATATAGAGCATAAAATTGGTAATATGACCAATATTGTAACGAAGGAACACTCACTTGATGTGTTATCAAATGTAATTACCTCTGAAGTGCTGAATGAGGAAGATGTTCTTCAAAAAGAGGTTAGTCAAAAGGAGGATGGTGTTGTTAATTCTGCTATTGAAAATAGGGATAAAACATTGGTGAGTAGTCTTGTTGTTTCAGAAGAAGAAAATGATAGTGAAGATGTGTCAACTTCTACTGAGGTCACATCCGAAGATAATGTTTCTATTAGTATGTTGATATAG

mRNA sequence

ATGTCTAAGCCAAAAGGGAAGAAGAAACGTGGAGAAACTTCTCTTATTCTTATAATGGAAGTCCTGGTTGGACTAAGTACTATTATTTTGTCTCCTCAACGTAAAGGTGAGTCCTTGTATTCGACCGGTAATGAGTCTAGTGTTATGAAAAATGTTGGTGAATCTGTTGAAACACTGCATGTTGAGTCTGTTAGTATTCTTAAAGTTCTTAAGGAAAATCGCATTGAACGAGAAATTAGAGTTTCAATTTTAACAAACCCAAACAATTTTGCTGAGGAACACTCACTTGATGTGTTATCAAATGTAATTACCTCTGAAGTGCTGAATGAGGAAGATGTTCTTCAAAAAGAGGTTAGTCAAAAGGAGGATGGTGTTGTTAATTCTGCTATTGAAAATAGGGATAAAACATTGGTGAGTAGTCTTGTTGTTTCAGAAGAAGAAAATGATAGTGAAGATGTGTCAACTTCTACTGAGGTCACATCCGAAGATAATGTTTCTATTAGTATGTTGATATAG

Coding sequence (CDS)

ATGTCTAAGCCAAAAGGGAAGAAGAAACGTGGAGAAACTTCTCTTATTCTTATAATGGAAGTCCTGGTTGGACTAAGTACTATTATTTTGTCTCCTCAACGTAAAGGTGAGTCCTTGTATTCGACCGGTAATGAGTCTAGTGTTATGAAAAATGTTGGTGAATCTGTTGAAACACTGCATGTTGAGTCTGTTAGTATTCTTAAAGTTCTTAAGGAAAATCGCATTGAACGAGAAATTAGAGTTTCAATTTTAACAAACCCAAACAATTTTGCTGAGGAACACTCACTTGATGTGTTATCAAATGTAATTACCTCTGAAGTGCTGAATGAGGAAGATGTTCTTCAAAAAGAGGTTAGTCAAAAGGAGGATGGTGTTGTTAATTCTGCTATTGAAAATAGGGATAAAACATTGGTGAGTAGTCTTGTTGTTTCAGAAGAAGAAAATGATAGTGAAGATGTGTCAACTTCTACTGAGGTCACATCCGAAGATAATGTTTCTATTAGTATGTTGATATAG

Protein sequence

MSKPKGKKKRGETSLILIMEVLVGLSTIILSPQRKGESLYSTGNESSVMKNVGESVETLHVESVSILKVLKENRIEREIRVSILTNPNNFAEEHSLDVLSNVITSEVLNEEDVLQKEVSQKEDGVVNSAIENRDKTLVSSLVVSEEENDSEDVSTSTEVTSEDNVSISMLI

Homology

The following BLAST results are available for this feature:

BLAST of Bhi09M002668 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi09M002668 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi09M002668 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..171

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi09G002668	Bhi09G002668	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi09M002668.exon1	Bhi09M002668.exon1	exon
Bhi09M002668.exon2	Bhi09M002668.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi09M002668	cds.Bhi09M002668	CDS
cds.Bhi09M002668	cds.Bhi09M002668_2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi09M002668	Bhi09M002668-protein	polypeptide