Bhi08M001539 (mRNA) Wax gourd (B227) v1

Overview


Name	Bhi08M001539
Type	mRNA
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr8: 54318485 .. 54318829 (-)
Sequence length	345
RNA-Seq Expression	Bhi08M001539
Synteny	Bhi08M001539

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTGGAAGAACAAGGATCTGAGCCACAATGACCGACTGGGCTACGACGAAAGGGATCTGAGCTACAACGATCGACTTGTACCTTTGATGGCTCAACTTCAACTGAATGGAGGGCTGGGCTTGTACCTTCAACAACGGAACGAACGGTTGGGCTTCCACGGAATGGATGGTGGATCTCCTAGAAGAAGACAACTAGTTCTACTATGGCTACACGTGAAGAACGACAAATCTTCCACGACTAGATCTAAGGTGTGGCGAGGAGGTGGCGAGATGGTGTCGAGCTATGGTGAGCGGCGAGGTCCAGGGAGCGAGGAGATGGATGATGGGGAAAATAGGGTTTAG

mRNA sequence

ATGAGTTGGAAGAACAAGGATCTGAGCCACAATGACCGACTGGGCTACGACGAAAGGGATCTGAGCTACAACGATCGACTTGTACCTTTGATGGCTCAACTTCAACTGAATGGAGGGCTGGGCTTGTACCTTCAACAACGGAACGAACGGTTGGGCTTCCACGGAATGGATGGTGGATCTCCTAGAAGAAGACAACTAGTTCTACTATGGCTACACGTGAAGAACGACAAATCTTCCACGACTAGATCTAAGGTGTGGCGAGGAGGTGGCGAGATGGTGTCGAGCTATGGTGAGCGGCGAGGTCCAGGGAGCGAGGAGATGGATGATGGGGAAAATAGGGTTTAG

Coding sequence (CDS)

ATGAGTTGGAAGAACAAGGATCTGAGCCACAATGACCGACTGGGCTACGACGAAAGGGATCTGAGCTACAACGATCGACTTGTACCTTTGATGGCTCAACTTCAACTGAATGGAGGGCTGGGCTTGTACCTTCAACAACGGAACGAACGGTTGGGCTTCCACGGAATGGATGGTGGATCTCCTAGAAGAAGACAACTAGTTCTACTATGGCTACACGTGAAGAACGACAAATCTTCCACGACTAGATCTAAGGTGTGGCGAGGAGGTGGCGAGATGGTGTCGAGCTATGGTGAGCGGCGAGGTCCAGGGAGCGAGGAGATGGATGATGGGGAAAATAGGGTTTAG

Protein sequence

MSWKNKDLSHNDRLGYDERDLSYNDRLVPLMAQLQLNGGLGLYLQQRNERLGFHGMDGGSPRRRQLVLLWLHVKNDKSSTTRSKVWRGGGEMVSSYGERRGPGSEEMDDGENRV

Homology

The following BLAST results are available for this feature:

BLAST of Bhi08M001539 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi08M001539 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi08M001539 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..114

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi08G001539	Bhi08G001539	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi08M001539.exon1	Bhi08M001539.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi08M001539	cds.Bhi08M001539	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi08M001539	Bhi08M001539-protein	polypeptide