Bhi07M001532 (mRNA) Wax gourd (B227) v1

Overview


Name	Bhi07M001532
Type	mRNA
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Heat shock protein DnaJ, cysteine-rich domain containing protein
Location	chr7: 51630017 .. 51631103 (-)
Sequence length	1087
RNA-Seq Expression	Bhi07M001532
Synteny	Bhi07M001532

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGAAGCAAAAGGAGAAGGCACCCACGCAAAAACCACCTTCACTAAACTCCAATTTCTTCTTCACTCAAAGCCACCAACTGCCACCTTCGTCTACGTGTTCCTCCTTCTCACCACTTTCTTCTTTTTTCTTTTTTCTTCTTATAATTAAATCAATAATAATAATAAAAAATCTCCCCCACCCCTAAAAATAAATAAAAATAAAATTGAAAAAATCGAAAAAGATCTCCCTTCCATTTCCCACTTTCCTCTTCCTTCCTCCCATCTCTCATTCCCCCCCTCTCTCTCTTCAATCACTCCCTCAACCATGGTTCCCATCGTCCTCACCCAACTCGCCACCGGCCTCAGCGTCCTCGCCGGCGCCGTCCTCGTCAAGTCCGTCATGGACCACAAGCCCATGGCCGGCTCCTTCCCCCGCTGCCCTTCCTGCAACGGCACCGGCCGCGTCCCCTGCCTCTGCTCCCGCTGGTCCGACGGCGACATCGGCTGCCGTACCTGCTCTGGCTCTGGCCGTATGTTCTGCAGCAGCTGTGGCGGCTCCGGCACTGGCCGCCCTATCCCCGCTCAAATCTCCGTCCGCCGATCCAATTATCCTTCATCTTCTTCCTGATTCGCGTTCTCACTACTCTAATATTTCCTTATCTCCATCATTAATTAATAGGGCACAAAAAAGGGGAAAAAAAAAAAAAAAACTCTGTAATTGGGAGTTCTTGAAATTGAGGCGTTTCACTCAATTCAGATTCGTATAGAAATCGATACTTCTCTTTATACTAATTTTTATAATTCTTTGTTTATTATCCTTTTCTCTGATTCTGATTTTTTCTTTTACTTCATTTGATTTGTCGATTGTGGTTTTAATTGCAAGCTGCATTTCGGCCGATTCAGATAAGCGAGTTCATATATAAGTCGGATTAAGTGAAGCTGTTTAGTGTAATATTTGGTGCTATGAATTGAATTAGAGTTTTAATTATCGAATCCAATGAATCTGTGGTTTGTGGAGAGGAGATTATGCTGCGATTTTTTTTCTGCAATAATAATAATAATAATGAAATAAAAGAATTGGAGGAAGGAAGTGTTGAACAAGTTGC

mRNA sequence

ATTGAAGCAAAAGGAGAAGGCACCCACGCAAAAACCACCTTCACTAAACTCCAATTTCTTCTTCACTCAAAGCCACCAACTGCCACCTTCGTCTACGTGTTCCTCCTTCTCACCACTTTCTTCTTTTTTCTTTTTTCTTCTTATAATTAAATCAATAATAATAATAAAAAATCTCCCCCACCCCTAAAAATAAATAAAAATAAAATTGAAAAAATCGAAAAAGATCTCCCTTCCATTTCCCACTTTCCTCTTCCTTCCTCCCATCTCTCATTCCCCCCCTCTCTCTCTTCAATCACTCCCTCAACCATGGTTCCCATCGTCCTCACCCAACTCGCCACCGGCCTCAGCGTCCTCGCCGGCGCCGTCCTCGTCAAGTCCGTCATGGACCACAAGCCCATGGCCGGCTCCTTCCCCCGCTGCCCTTCCTGCAACGGCACCGGCCGCGTCCCCTGCCTCTGCTCCCGCTGGTCCGACGGCGACATCGGCTGCCGTACCTGCTCTGGCTCTGGCCGTATGTTCTGCAGCAGCTGTGGCGGCTCCGGCACTGGCCGCCCTATCCCCGCTCAAATCTCCGTCCGCCGATCCAATTATCCTTCATCTTCTTCCTGATTCGCGTTCTCACTACTCTAATATTTCCTTATCTCCATCATTAATTAATAGGGCACAAAAAAGGGGAAAAAAAAAAAAAAAACTCTGTAATTGGGAGTTCTTGAAATTGAGGCGTTTCACTCAATTCAGATTCGTATAGAAATCGATACTTCTCTTTATACTAATTTTTATAATTCTTTGTTTATTATCCTTTTCTCTGATTCTGATTTTTTCTTTTACTTCATTTGATTTGTCGATTGTGGTTTTAATTGCAAGCTGCATTTCGGCCGATTCAGATAAGCGAGTTCATATATAAGTCGGATTAAGTGAAGCTGTTTAGTGTAATATTTGGTGCTATGAATTGAATTAGAGTTTTAATTATCGAATCCAATGAATCTGTGGTTTGTGGAGAGGAGATTATGCTGCGATTTTTTTTCTGCAATAATAATAATAATAATGAAATAAAAGAATTGGAGGAAGGAAGTGTTGAACAAGTTGC

Coding sequence (CDS)

ATGGTTCCCATCGTCCTCACCCAACTCGCCACCGGCCTCAGCGTCCTCGCCGGCGCCGTCCTCGTCAAGTCCGTCATGGACCACAAGCCCATGGCCGGCTCCTTCCCCCGCTGCCCTTCCTGCAACGGCACCGGCCGCGTCCCCTGCCTCTGCTCCCGCTGGTCCGACGGCGACATCGGCTGCCGTACCTGCTCTGGCTCTGGCCGTATGTTCTGCAGCAGCTGTGGCGGCTCCGGCACTGGCCGCCCTATCCCCGCTCAAATCTCCGTCCGCCGATCCAATTATCCTTCATCTTCTTCCTGA

Protein sequence

MVPIVLTQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRSNYPSSSS

Homology

[Close]

BLAST of Bhi07M001532 vs. TAIR 10
Match: AT5G43260.1 (chaperone protein dnaJ-related )

HSP 1 Score: 162.5 bits (410), Expect = 1.7e-40
Identity = 75/96 (78.12%), Postives = 84/96 (87.50%), Query Frame = 0


Query: 1  MVPIVLTQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
          M PIV+TQLATG+SVLAGAV +KSVMD KPMAG FPRCP+CNGTGRV C CSRWSDGD+G
Sbjct: 1  MSPIVITQLATGISVLAGAVFIKSVMDQKPMAGQFPRCPTCNGTGRVTCFCSRWSDGDVG 60

Query: 61 CRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRSNYP 97
          CR CSGSGR  CS+CGGSGTGRP+PAQI+V+  N P
Sbjct: 61 CRRCSGSGRAACSNCGGSGTGRPLPAQITVQPPNRP 96

[Close]

BLAST of Bhi07M001532 vs. TAIR 10
Match: AT3G44020.1 (thylakoid lumenal P17.1 protein )

HSP 1 Score: 40.4 bits (93), Expect = 9.8e-04
Identity = 20/50 (40.00%), Postives = 25/50 (50.00%), Query Frame = 0


Query: 38  CPSCNGTGRVPCL-C----SRWSDGDIGCRTCSGSGRMFCSSCGGSGTGR 83
           C  C G G   C+ C     +   G + C+ C GSG +FC  CGGSG  R
Sbjct: 108 CERCGGNGGTKCVFCLEGKMKVESGMVDCKVCKGSGLIFCKKCGGSGYSR 157

[Close]

BLAST of Bhi07M001532 vs. ExPASy TrEMBL
Match: A0A1S3BEY5 (uncharacterized protein LOC103488885 OS=Cucumis melo OX=3656 GN=LOC103488885 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.9e-48
Identity = 97/100 (97.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MVPIVLTQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
           MVPIVL+QLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG
Sbjct: 1   MVPIVLSQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60

Query: 61  CRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRSNYPSSSS 101
           CRTCSGSGRMFCSSCGGSGTGRP+PAQIS+RRSNYPSSSS
Sbjct: 61  CRTCSGSGRMFCSSCGGSGTGRPLPAQISLRRSNYPSSSS 100

[Close]

BLAST of Bhi07M001532 vs. ExPASy TrEMBL
Match: A0A0A0KPV9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589380 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 9.4e-47
Identity = 96/100 (96.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MVPIVLTQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
           MVPIVL+QLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNG+GRVPCLCSRWSDGDIG
Sbjct: 1   MVPIVLSQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGSGRVPCLCSRWSDGDIG 60

Query: 61  CRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRSNYPSSSS 101
            RTCSGSGRMFCSSCGGSGTGRPIP+QISVRRSNYPSSSS
Sbjct: 61  WRTCSGSGRMFCSSCGGSGTGRPIPSQISVRRSNYPSSSS 100

[Close]

BLAST of Bhi07M001532 vs. ExPASy TrEMBL
Match: A0A6J1DG38 (uncharacterized protein LOC111019780 OS=Momordica charantia OX=3673 GN=LOC111019780 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.5e-44
Identity = 90/99 (90.91%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MVPIVLTQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
           MVP+VLTQLATGLSVLAGAVLVKSVMD KPMAG FPRCPSCNGTGRV CLCSRWSDGD+G
Sbjct: 1   MVPMVLTQLATGLSVLAGAVLVKSVMDQKPMAGPFPRCPSCNGTGRVACLCSRWSDGDVG 60

Query: 61  CRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRSNYPSSS 100
           CRTCSGSGRMFCSSCGG+GTGRPIPAQ+SVRR+N+PSSS
Sbjct: 61  CRTCSGSGRMFCSSCGGTGTGRPIPAQLSVRRTNHPSSS 99

[Close]

BLAST of Bhi07M001532 vs. ExPASy TrEMBL
Match: A0A6J1K8V1 (uncharacterized protein LOC111493328 OS=Cucurbita maxima OX=3661 GN=LOC111493328 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.4e-44
Identity = 95/100 (95.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MVPIVLTQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
           MVPIVLTQLATGLSVLAGAVLVKSVMD KPMAGS PRCPSCNGTGRVPCLCSRWSD DIG
Sbjct: 1   MVPIVLTQLATGLSVLAGAVLVKSVMD-KPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIG 60

Query: 61  CRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRSNYPSSSS 101
           CRTCSGSGRMFCSSCGGSGTGRPIPAQISVRR+NYP SSS
Sbjct: 61  CRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS 99

[Close]

BLAST of Bhi07M001532 vs. ExPASy TrEMBL
Match: A0A6J1GZK6 (uncharacterized protein LOC111458584 OS=Cucurbita moschata OX=3662 GN=LOC111458584 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.4e-44
Identity = 95/100 (95.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MVPIVLTQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
           MVPIVLTQLATGLSVLAGAVLVKSVMD KPMAGS PRCPSCNGTGRVPCLCSRWSD DIG
Sbjct: 1   MVPIVLTQLATGLSVLAGAVLVKSVMD-KPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIG 60

Query: 61  CRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRSNYPSSSS 101
           CRTCSGSGRMFCSSCGGSGTGRPIPAQISVRR+NYP SSS
Sbjct: 61  CRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS 99

The following BLAST results are available for this feature:

BLAST of Bhi07M001532 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43260.1	1.7e-40	78.13	chaperone protein dnaJ-related	[more]
AT3G44020.1	9.8e-04	40.00	thylakoid lumenal P17.1 protein	[more]

BLAST of Bhi07M001532 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi07M001532 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BEY5	2.9e-48	97.00	uncharacterized protein LOC103488885 OS=Cucumis melo OX=3656 GN=LOC103488885 PE=...	[more]
A0A0A0KPV9	9.4e-47	96.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589380 PE=4 SV=1	[more]
A0A6J1DG38	1.5e-44	90.91	uncharacterized protein LOC111019780 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1K8V1	3.4e-44	95.00	uncharacterized protein LOC111493328 OS=Cucurbita maxima OX=3661 GN=LOC111493328...	[more]
A0A6J1GZK6	3.4e-44	95.00	uncharacterized protein LOC111458584 OS=Cucurbita moschata OX=3662 GN=LOC1114585...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..100
None	No IPR available	PANTHER	PTHR34687:SF4	BNAC09G17400D PROTEIN	coord: 1..96
None	No IPR available	PANTHER	PTHR34687	CHAPERONE PROTEIN DNAJ-LIKE PROTEIN	coord: 1..96

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi07G001532	Bhi07G001532	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi07M001532.exon1	Bhi07M001532.exon1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi07M001532.utr3p1	Bhi07M001532.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi07M001532	cds.Bhi07M001532	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi07M001532.utr5p1	Bhi07M001532.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi07M001532	Bhi07M001532-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane