Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAACATACCAATCGTTGATGGGATGGATGAGGTTTTCCCAGATACACCCATCAGTAGGCGTACCGGATTAAGTAACGATACGAGAGGAACGAAACACAAGAGAACTCCCTTCCAATCTGAAATGCTTGACATTGTACGCACAACAATGGATGTGCAGGAAAGTAAAATGAAGAAACTTATACAATGGCAGAAAGAGAAATATGAATTGGAGCTCAAGAGGCATCAGGAAGTCATCGAACAGATCTACCAAGTTGAGGGTTTAGAGGAGGACGATTAG mRNA sequence ATGAACATACCAATCGTTGATGGGATGGATGAGGTTTTCCCAGATACACCCATCAGTAGGCGTACCGGATTAAGTAACGATACGAGAGGAACGAAACACAAGAGAACTCCCTTCCAATCTGAAATGCTTGACATTGTACGCACAACAATGGATGTGCAGGAAAGTAAAATGAAGAAACTTATACAATGGCAGAAAGAGAAATATGAATTGGAGCTCAAGAGGCATCAGGAAGTCATCGAACAGATCTACCAAGTTGAGGGTTTAGAGGAGGACGATTAG Coding sequence (CDS) ATGAACATACCAATCGTTGATGGGATGGATGAGGTTTTCCCAGATACACCCATCAGTAGGCGTACCGGATTAAGTAACGATACGAGAGGAACGAAACACAAGAGAACTCCCTTCCAATCTGAAATGCTTGACATTGTACGCACAACAATGGATGTGCAGGAAAGTAAAATGAAGAAACTTATACAATGGCAGAAAGAGAAATATGAATTGGAGCTCAAGAGGCATCAGGAAGTCATCGAACAGATCTACCAAGTTGAGGGTTTAGAGGAGGACGATTAG Protein sequence MNIPIVDGMDEVFPDTPISRRTGLSNDTRGTKHKRTPFQSEMLDIVRTTMDVQESKMKKLIQWQKEKYELELKRHQEVIEQIYQVEGLEEDD
Homology
BLAST of Bhi07M000177 vs. ExPASy TrEMBL
Match: A0A6J1DW73 (uncharacterized protein LOC111025018 OS=Momordica charantia OX=3673 GN=LOC111025018 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 8.2e-05 Identity = 31/86 (36.05%), Postives = 55/86 (63.95%), Query Frame = 0 Query: 7 DGMDEVFPDTPISRRTGLSNDTRGTKHKRTPFQSEMLDIVRTTMDVQESKMKKLIQWQKE 66 D ++E P+TP S+ T + + G+K KR+ + SEM+D+VRT M +Q + ++K+ W + Sbjct: 96 DAIEEDLPNTPTSKPT-IGTSSGGSKRKRSGYTSEMVDVVRTNMRMQTAHLEKMATWPDK 155
Query: 67 KYELELKRHQEVIEQIYQVEGLEEDD 93 K E ++ R + V +Q+ Q+ LE +D Sbjct: 156 KEEKKIARRKIVHDQLKQIPNLEAND 180
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DW73 | 8.2e-05 | 36.05 | uncharacterized protein LOC111025018 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 65..85 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..37 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Bhi07M000177.exon1 | Bhi07M000177.exon1 | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
cds.Bhi07M000177 | cds.Bhi07M000177 | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
Bhi07M000177 | Bhi07M000177-protein | polypeptide |
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