Bhi07M000041 (mRNA) Wax gourd (B227) v1

Overview


Name	Bhi07M000041
Type	mRNA
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	NADPH-dependent pterin aldehyde reductase-like
Location	chr7: 2599899 .. 2600105 (-)
Sequence length	207
RNA-Seq Expression	Bhi07M000041
Synteny	Bhi07M000041

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACAGCAACTGCTGATGAGTCCTCTCGAAAGGTGTTGATCACAGGCGTTAGCAAAGGATTAGGACGAGCCTTAGCGTTGGAGTTAGCCAATCGTGGCCATACAATCATTGGATGCTCACGTGATCAAACTAAACTTCATTCCCTTCAACAACAGCTTGCTCAAGTTTCTTCCACAAAGCATTTACTCTTCAACGTTGATGTG

mRNA sequence

ATGGCCACAGCAACTGCTGATGAGTCCTCTCGAAAGGTGTTGATCACAGGCGTTAGCAAAGGATTAGGACGAGCCTTAGCGTTGGAGTTAGCCAATCGTGGCCATACAATCATTGGATGCTCACGTGATCAAACTAAACTTCATTCCCTTCAACAACAGCTTGCTCAAGTTTCTTCCACAAAGCATTTACTCTTCAACGTTGATGTG

Coding sequence (CDS)

ATGGCCACAGCAACTGCTGATGAGTCCTCTCGAAAGGTGTTGATCACAGGCGTTAGCAAAGGATTAGGACGAGCCTTAGCGTTGGAGTTAGCCAATCGTGGCCATACAATCATTGGATGCTCACGTGATCAAACTAAACTTCATTCCCTTCAACAACAGCTTGCTCAAGTTTCTTCCACAAAGCATTTACTCTTCAACGTTGATGTG

Protein sequence

MATATADESSRKVLITGVSKGLGRALALELANRGHTIIGCSRDQTKLHSLQQQLAQVSSTKHLLFNVDV

Homology

[Close]

BLAST of Bhi07M000041 vs. TAIR 10
Match: AT1G10310.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 79.7 bits (195), Expect = 1.0e-15
Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 9  SSRKVLITGVSKGLGRALALELANRGHTIIGCSRDQTKLHSLQQQLAQVSSTKHLLFNVD 68
          ++R VLITGVSKGLGRALALELA RGHT+IGC+R Q KL +LQ +L+  SST HLL   D
Sbjct: 16 AARTVLITGVSKGLGRALALELAKRGHTVIGCARSQEKLTALQSELS--SSTNHLLLTAD 74

Query: 69 V 70
          V
Sbjct: 76 V 74

[Close]

BLAST of Bhi07M000041 vs. TAIR 10
Match: AT3G55290.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 40.4 bits (93), Expect = 6.7e-04
Identity = 20/48 (41.67%), Postives = 30/48 (62.50%), Query Frame = 0


Query: 13 VLITGVSKGLGRALALELANRGHTIIGCSRDQTKLHSLQQQLAQVSST 61
          VL+TG S G+GR + L+LA  G  +I  +R   +L+SL  ++   SST
Sbjct: 23 VLVTGASSGIGREICLDLAKAGCQVIAAARRVDRLNSLCSEINSFSST 70

[Close]

BLAST of Bhi07M000041 vs. TAIR 10
Match: AT3G55310.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 40.4 bits (93), Expect = 6.7e-04
Identity = 20/48 (41.67%), Postives = 30/48 (62.50%), Query Frame = 0


Query: 13 VLITGVSKGLGRALALELANRGHTIIGCSRDQTKLHSLQQQLAQVSST 61
          VL+TG S G+GR + L+LA  G  +I  +R   +L+SL  ++   SST
Sbjct: 22 VLVTGASSGIGREICLDLAKAGCQVIAAARRVDRLNSLCSEINSFSST 69

[Close]

BLAST of Bhi07M000041 vs. TAIR 10
Match: AT3G55290.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 40.4 bits (93), Expect = 6.7e-04
Identity = 20/48 (41.67%), Postives = 30/48 (62.50%), Query Frame = 0


Query: 13 VLITGVSKGLGRALALELANRGHTIIGCSRDQTKLHSLQQQLAQVSST 61
          VL+TG S G+GR + L+LA  G  +I  +R   +L+SL  ++   SST
Sbjct: 22 VLVTGASSGIGREICLDLAKAGCQVIAAARRVDRLNSLCSEINSFSST 69

[Close]

BLAST of Bhi07M000041 vs. ExPASy Swiss-Prot
Match: Q9SY73 (NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana OX=3702 GN=At1g10310 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.4e-14
Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 9  SSRKVLITGVSKGLGRALALELANRGHTIIGCSRDQTKLHSLQQQLAQVSSTKHLLFNVD 68
          ++R VLITGVSKGLGRALALELA RGHT+IGC+R Q KL +LQ +L+  SST HLL   D
Sbjct: 16 AARTVLITGVSKGLGRALALELAKRGHTVIGCARSQEKLTALQSELS--SSTNHLLLTAD 74

Query: 69 V 70
          V
Sbjct: 76 V 74

[Close]

BLAST of Bhi07M000041 vs. ExPASy TrEMBL
Match: A0A5D3CBK4 (NADPH-dependent pterin aldehyde reductase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76G00240 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.2e-18
Identity = 52/60 (86.67%), Postives = 56/60 (93.33%), Query Frame = 0


Query: 10 SRKVLITGVSKGLGRALALELANRGHTIIGCSRDQTKLHSLQQQLAQVSSTKHLLFNVDV 69
          SRKVLITGVSKGLGRALALELA+RGHTIIGCSRDQTKL SLQ QL+ +SSTKHLL N+DV
Sbjct: 18 SRKVLITGVSKGLGRALALELASRGHTIIGCSRDQTKLDSLQAQLSNLSSTKHLLCNLDV 77

[Close]

BLAST of Bhi07M000041 vs. ExPASy TrEMBL
Match: A0A1S3CMA0 (NADPH-dependent pterin aldehyde reductase-like OS=Cucumis melo OX=3656 GN=LOC103502554 PE=3 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.2e-18
Identity = 52/60 (86.67%), Postives = 56/60 (93.33%), Query Frame = 0


Query: 10 SRKVLITGVSKGLGRALALELANRGHTIIGCSRDQTKLHSLQQQLAQVSSTKHLLFNVDV 69
          SRKVLITGVSKGLGRALALELA+RGHTIIGCSRDQTKL SLQ QL+ +SSTKHLL N+DV
Sbjct: 18 SRKVLITGVSKGLGRALALELASRGHTIIGCSRDQTKLDSLQAQLSNLSSTKHLLCNLDV 77

[Close]

BLAST of Bhi07M000041 vs. ExPASy TrEMBL
Match: A0A6J1JHZ2 (NADPH-dependent pterin aldehyde reductase-like OS=Cucurbita maxima OX=3661 GN=LOC111485267 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.1e-17
Identity = 51/66 (77.27%), Postives = 58/66 (87.88%), Query Frame = 0


Query: 4  ATADESSRKVLITGVSKGLGRALALELANRGHTIIGCSRDQTKLHSLQQQLAQVSSTKHL 63
          A+ +ESSRKVLITGVSKGLGRALALELA RGHTIIGCSRDQTKL SLQ+QL++ S  +H 
Sbjct: 3  ASHNESSRKVLITGVSKGLGRALALELATRGHTIIGCSRDQTKLDSLQEQLSKSSLIQHF 62

Query: 64 LFNVDV 70
          LF +DV
Sbjct: 63 LFKLDV 68

[Close]

BLAST of Bhi07M000041 vs. ExPASy TrEMBL
Match: A0A6J1EP06 (NADPH-dependent pterin aldehyde reductase-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111436387 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.8e-17
Identity = 53/69 (76.81%), Postives = 60/69 (86.96%), Query Frame = 0


Query: 1  MATATADESSRKVLITGVSKGLGRALALELANRGHTIIGCSRDQTKLHSLQQQLAQVSST 60
          MAT + +ESSRKVLITGVSKGLGRALALELA RGHTIIGCSRDQTKL SLQ+QL++ S  
Sbjct: 1  MAT-SHNESSRKVLITGVSKGLGRALALELATRGHTIIGCSRDQTKLDSLQEQLSKSSLI 60

Query: 61 KHLLFNVDV 70
          +H LF +DV
Sbjct: 61 QHFLFKLDV 68

[Close]

BLAST of Bhi07M000041 vs. ExPASy TrEMBL
Match: A0A6J1EPI1 (NADPH-dependent pterin aldehyde reductase-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436387 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.8e-17
Identity = 53/69 (76.81%), Postives = 60/69 (86.96%), Query Frame = 0


Query: 1  MATATADESSRKVLITGVSKGLGRALALELANRGHTIIGCSRDQTKLHSLQQQLAQVSST 60
          MAT + +ESSRKVLITGVSKGLGRALALELA RGHTIIGCSRDQTKL SLQ+QL++ S  
Sbjct: 1  MAT-SHNESSRKVLITGVSKGLGRALALELATRGHTIIGCSRDQTKLDSLQEQLSKSSLI 60

Query: 61 KHLLFNVDV 70
          +H LF +DV
Sbjct: 61 QHFLFKLDV 68

The following BLAST results are available for this feature:

BLAST of Bhi07M000041 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10310.1	1.0e-15	68.85	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G55290.1	6.7e-04	41.67	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G55310.1	6.7e-04	41.67	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G55290.2	6.7e-04	41.67	NAD(P)-binding Rossmann-fold superfamily protein	[more]

BLAST of Bhi07M000041 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SY73	1.4e-14	68.85	NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of Bhi07M000041 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CBK4	2.2e-18	86.67	NADPH-dependent pterin aldehyde reductase-like OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3CMA0	2.2e-18	86.67	NADPH-dependent pterin aldehyde reductase-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1JHZ2	1.1e-17	77.27	NADPH-dependent pterin aldehyde reductase-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1EP06	1.8e-17	76.81	NADPH-dependent pterin aldehyde reductase-like isoform X2 OS=Cucurbita moschata ...	[more]
A0A6J1EPI1	1.8e-17	76.81	NADPH-dependent pterin aldehyde reductase-like isoform X1 OS=Cucurbita moschata ...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 2..69 e-value: 1.1E-12 score: 49.6
None	No IPR available	PANTHER	PTHR45267	FAMILY NOT NAMED	coord: 4..69
IPR002347	Short-chain dehydrogenase/reductase SDR	PFAM	PF00106	adh_short	coord: 12..69 e-value: 7.5E-10 score: 38.6
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 9..69

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi07G000041	Bhi07G000041	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi07M000041.exon1	Bhi07M000041.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi07M000041	cds.Bhi07M000041	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi07M000041	Bhi07M000041-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016491	oxidoreductase activity