Bhi06M001161 (mRNA) Wax gourd (B227) v1

Overview
NameBhi06M001161
TypemRNA
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionProtein kinase domain-containing protein
Locationchr6: 39226799 .. 39229419 (-)
Sequence length166
RNA-Seq ExpressionBhi06M001161
SyntenyBhi06M001161
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCCTCAGGTTTAGCTATTCTTCAGTGTAAGGTATGTAAAATTGTAAATTCATTGTAAAAGAAGTTTATGTGTTGGTCGCTGTTTTACGTGTTTATGTGTTTTTCTCTCACACTCGAATGTTTTGTCATGTGTTGGTAGATAAATTTAAGTATTTAAAATTATGAAAAGAAAAAAGAAAACAATAACCCGGTAACCCAACCCAACCTAACCTGAATTTGTAGTTGTCCAAAGATTCAAACATACCATAAACTTGGAGTTGAGCTATACAATGTGATGCAATTGATAAGGTCTACGTAAATGTTAAATTCTCTATCTAAATTACCTTCTTTTGAAACCCAAATCCCAGTCTTGGTGCTTATTACAAATGTTTCAGGGAACTCTATGGCAATAGGAGCTACGCCTCCAATCCAAAAGTACAATTCAATGTTTAGGCTTAGTTTGATAACCGTGTGATTTTTAGGCTTGTTTGATAGCTATTGAATATACAACTTTATATATTTCTTAGATATTATGAAAGGAATACCAAAGGTATTATTTTTTCATGACGAGACACAATTTGAGTATTGAGGAGTATTGATAAATGTCCTCCTTGATCTTTTAATGTGTTAGTGTTAAGGATATAATATCTTACTTATCCACCATCTTACGATGGTAATGATATATATTGTCTACATTTATTATAAGTTATTATGGCCTTACTTTTGGTTTTACTGTTGGGAAAAACCCCACTTCTATCGTAGGAATAAACAAAAAAAAAAAGGGAGAAATTAAAAGAAAGTAATAAAAAATAGGAAACAGAAGAATTTATGTGGAAAACACCAAAACTGATGAAAAACCATGACTCACCAGAAAGAAGCCCATTATGTGAAAAAAATGTTACAATCACAAAAAGTTCTCTCCTCGATCCCAATTACAAAAACACTCTCTTAAAGCTTTTGGTACAAGTCATACCCTTTTCCCCATTCTCAAACTAGAGAATACAAAAAGTATAGAGACTGAAATTGGATATTTGAAAGTATAAGAACTAATATTGAACATTTAAAAATATGAGGACTAAAAGTGAACTAACCTCAAAGTATAGAGACTAAAATGATATTATAACAATTTTTTATCAAGCTTAATAAGATATGTGCATGTATATATTTGAATTTTTTATTTTTAGAATATATTCAAGTTGGTGGGAGAATATGGACTATTTTGTTCTTTTCACAATTTTAAATCTACAGGCATAAAACATGCGTATGCACACAAACACATCATTTGGGTGGATAGAAGAATTTCTTTCCACCCAACCACAATGACCATAAATATGAATACAATTTATAATGAATGATAAAGTAAAACTAAACCTAAATCATGTAGTCAAAAATAGAGAACCGGAAAGCTATATCTGAAAAGTTTAGGCAGTGGTTATTAAAATAAATTTAGAGCATATTTGGGAGTGATTTTGGAATGGTTAAAAGTACTTTTGTCATTTTTAAAATCATTATAAAATATGCTTTTAATTATTCAAAACCAGTTTTAATGATATGAAATTACATTTAATTAAATATTAAAATAATTTTGAGTGATTAAAGATGTGTTTTGAAGTGACTTTTGAACATGAAAAAGTGATTTTTAACAATTTCAAAATCACACCTAAACATGCACTTAAATTATCATTTAACTCTCATAGTTTCAATTTTCCTTTCTTTAAAAGTTTTATTGTATATTTTTTCTTTCTTTTTCTTTTTCTTTTTTTTTTTTTGAAAAGTTATCATATAGTTTTTATAGCATGGTTAGATCTCCCAAAGTTATGAAATATTTAGAATTTCCTAATGTGAACTGTTTTCATTAGTTGTGGCAGAGAGAAATTTAGGCAGATTTTTAGATTATAGTTTTATAAGCTGCATGGCAAAACCTACTCTTTTTTCTTGCACAATCTAAATTCTTTTTAATTTTCACCCAAAAATTCACTATACTTTCTATACTTTTACCAAGCTTAAATCCTAATAGATGGCGAATTGATATGACCAATAAAATAAATCTTTGATATATTTTATGCTAGAAAAACATAATTATAATTCATAGGTCAGCAATTGAGACATCTCACGCTACTTCGAAGAGGTTGTAAGTTGAATTGTCACCTTCATATTTGTGATGTAATGTTCTAAAAGGACGTATATCACCTTTGCATATTATATCAAACAAAACATATTGTTAGGTGTTGAAACCACCCGCATAACTCCACATTAGTGTGATATTGTCCACTTTGGTCGCTAGCTCTCATGATTTTGTTTTGAGAATTACCAAAAATGCATCACACTGATGGACATATTGTTACGCAATTCCCGCTTCTTTGTAAATTGGAGGATTTTAATGATCTTTTGATCTATTTTTAGAATATCTTATTATTATTATTATTATTTTGGGATGCTTTTAGGTTTTGTTTTTGATTGATTTGTTACTTTTTTTCTTCTTTAATCCTTTAAATTGATTTTTTCAGGATGTTCTTTTGATTCCTTATGATGTGCCAAATGGATTTGGGGAAACCGGAGAATTTGTTTCGCTAAAAACTGAGAAACTTGGGAGTTGCTTTCTGGATGGTTACACATTTTTGTGGTTTTGTTTTCGTGTGTGA

mRNA sequence

GGCCTCAGGTTTAGCTATTCTTCAGTGTAAGGATGTTCTTTTGATTCCTTATGATGTGCCAAATGGATTTGGGGAAACCGGAGAATTTGTTTCGCTAAAAACTGAGAAACTTGGGAGTTGCTTTCTGGATGGTTACACATTTTTGTGGTTTTGTTTTCGTGTGTGA

Coding sequence (CDS)

GGCCTCAGGTTTAGCTATTCTTCAGTGTAAGGATGTTCTTTTGATTCCTTATGATGTGCCAAATGGATTTGGGGAAACCGGAGAATTTGTTTCGCTAAAAACTGAGAAACTTGGGAGTTGCTTTCTGGATGGTTACACATTTTTGTGGTTTTGTTTTCGTGTGTGA

Protein sequence

ASGLAILQCKDVLLIPYDVPNGFGETGEFVSLKTEKLGSCFLDGYTFLWFCFRV
Homology
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BLAST of Bhi06M001161 vs. ExPASy TrEMBL
Match: A0A0A0LJ68 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G049880 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.4e-15
Identity = 42/48 (87.50%), Postives = 44/48 (91.67%), Query Frame = 0 

Query: 1  ASGLAILQCKDVLLIPYDVPNGFGETGEFVSLKTEKLGSCFLDGYTFL 49
          ASGLAILQCKDV LIPY+VPNGFG+T EF SLKTEKLGSCFLDGY FL
Sbjct: 10 ASGLAILQCKDVFLIPYNVPNGFGKTEEFGSLKTEKLGSCFLDGYKFL 57

The following BLAST results are available for this feature:
BLAST of Bhi06M001161 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi06M001161 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi06M001161 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJ681.4e-1587.50Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G049... [more]
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi06G001161Bhi06G001161gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi06M001161.exon2Bhi06M001161.exon2exon
Bhi06M001161.exon1Bhi06M001161.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi06M001161cds.Bhi06M001161_2CDS
cds.Bhi06M001161cds.Bhi06M001161CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi06M001161Bhi06M001161-proteinpolypeptide