Bhi06M000938 (mRNA) Wax gourd (B227) v1

Overview


Name	Bhi06M000938
Type	mRNA
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr6: 29506161 .. 29507437 (+)
Sequence length	1277
RNA-Seq Expression	Bhi06M000938
Synteny	Bhi06M000938

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAGGATATAAATAAATTTAGTATACAAGTTAATAACAATAACACAAAATAGAATACAAATACTGAAATACAATACAAAAAAAGCAAATGAAGAATGCTTTATATTTTGGTGGGTTTTATGGGACTCAAATGTGAAGATGGAGATTAGATAATTCTAGTCTAGACTTTGGTTCGTTATATTTTTTTCTTTTAGTTTTGAACTTGAGTAGTGAGTTTTTTTTTATTTTTTATTTTTTTTTATTTTAGATTGGAAAAGATTAAATTAGTTACTTAGTAAATAGTATCGATATTTACTACTGATTCTTTGCCTCACATGAAGTATCTGTGCTTCATAGTTCACACAAGAAACTCAGCATCGCCGTTTCTGTCAAGCCCTAACCGTCGTCGACATCAAATTCCACCACCACCCGAAGTCGCCGTACAGCCGCTGGATCCGTTCGTCGCGCCCCAGTCGAGCATCCTCCAGCCGTCAGTCACACGCTCTTTCCCTTGCTCGGCTGTCACTCTTCACGTTCAACGGAGCCGCGTCAGAATCCCTTCACTGTTCGCGCCTTCTTCTGTCTCCAGCGAACAGCTGTCGCCGAAGCCATCGGTCGCGCCAAGTTCCCGAGCCGCACGCGCCAGATCTCGTCTAGTCGTGCGCCATCCTCCAACCAGATCTGAAACCTCTGGCCTTCGTCCGAAGCCGCCACCTTCCATCTTCGTCGAAGCCACTTCCAGATCCGAGCGCTAGTCGTCTAGCCATCACCGACGCTCCTCTTCGCCGCCTGAGATCTTCATCGGATCTGTTCAAGCAACACTACTTTTAGCCGGATTTGGGTATTTTGAGTAAGTTACAAGGATCGATTTTTAGAGGATTTTGGTAACTTTTGTTGAGTTTTAGGACTTTGGCCGTTTTGGATTAAGGGGAATTGTGGAAAATTAAGTTATTAACTTTGGATTTAATCTATGTTCACGTTGGCAATTAAATTGAGTTTTAGAATTTGGTTAATTGGATTTAGACCCAAAGGATAAATTTAAAATTTTGGATTTATTATTTTGGGCCGAGGGTGCTAAATTAAATTTGTAGTTTATGTTATTGGGTGAATTCAAGTCTTCCAAAAGTTTTAAGAAGATTAATTACTTGGATTAAGATTTGTGACCAAAATTTGAGGTAAGTAATATTTTATTACTAGAACCGCCTATGTGACAGACGATAAATTTAAGATTAATTTTGAGGATACTAAGATGGTTTACATCGAGATGCATAAGGATAGATAAGATGATCTTGATTATAT

mRNA sequence

CTAGGATATAAATAAATTTAGTATACAAGTTAATAACAATAACACAAAATAGAATACAAATACTGAAATACAATACAAAAAAAGCAAATGAAGAATGCTTTATATTTTGGTGGGTTTTATGGGACTCAAATGTGAAGATGGAGATTAGATAATTCTAGTCTAGACTTTGGTTCGTTATATTTTTTTCTTTTAGTTTTGAACTTGAGTAGTGAGTTTTTTTTTATTTTTTATTTTTTTTTATTTTAGATTGGAAAAGATTAAATTAGTTACTTAGTAAATAGTATCGATATTTACTACTGATTCTTTGCCTCACATGAAGTATCTGTGCTTCATAGTTCACACAAGAAACTCAGCATCGCCGTTTCTGTCAAGCCCTAACCGTCGTCGACATCAAATTCCACCACCACCCGAAGTCGCCGTACAGCCGCTGGATCCGTTCGTCGCGCCCCAGTCGAGCATCCTCCAGCCGTCAGTCACACGCTCTTTCCCTTGCTCGGCTGTCACTCTTCACGTTCAACGGAGCCGCGTCAGAATCCCTTCACTGTTCGCGCCTTCTTCTGTCTCCAGCGAACAGCTGTCGCCGAAGCCATCGGTCGCGCCAAGTTCCCGAGCCGCACGCGCCAGATCTCGTCTAGTCGTGCGCCATCCTCCAACCAGATCTGAAACCTCTGGCCTTCGTCCGAAGCCGCCACCTTCCATCTTCGTCGAAGCCACTTCCAGATCCGAGCGCTAGTCGTCTAGCCATCACCGACGCTCCTCTTCGCCGCCTGAGATCTTCATCGGATCTGTTCAAGCAACACTACTTTTAGCCGGATTTGGGTATTTTGAGTAAGTTACAAGGATCGATTTTTAGAGGATTTTGGTAACTTTTGTTGAGTTTTAGGACTTTGGCCGTTTTGGATTAAGGGGAATTGTGGAAAATTAAGTTATTAACTTTGGATTTAATCTATGTTCACGTTGGCAATTAAATTGAGTTTTAGAATTTGGTTAATTGGATTTAGACCCAAAGGATAAATTTAAAATTTTGGATTTATTATTTTGGGCCGAGGGTGCTAAATTAAATTTGTAGTTTATGTTATTGGGTGAATTCAAGTCTTCCAAAAGTTTTAAGAAGATTAATTACTTGGATTAAGATTTGTGACCAAAATTTGAGGTAAGTAATATTTTATTACTAGAACCGCCTATGTGACAGACGATAAATTTAAGATTAATTTTGAGGATACTAAGATGGTTTACATCGAGATGCATAAGGATAGATAAGATGATCTTGATTATAT

Coding sequence (CDS)

ATGAAGTATCTGTGCTTCATAGTTCACACAAGAAACTCAGCATCGCCGTTTCTGTCAAGCCCTAACCGTCGTCGACATCAAATTCCACCACCACCCGAAGTCGCCGTACAGCCGCTGGATCCGTTCGTCGCGCCCCAGTCGAGCATCCTCCAGCCGTCAGTCACACGCTCTTTCCCTTGCTCGGCTGTCACTCTTCACGTTCAACGGAGCCGCGTCAGAATCCCTTCACTGTTCGCGCCTTCTTCTGTCTCCAGCGAACAGCTGTCGCCGAAGCCATCGGTCGCGCCAAGTTCCCGAGCCGCACGCGCCAGATCTCGTCTAGTCGTGCGCCATCCTCCAACCAGATCTGAAACCTCTGGCCTTCGTCCGAAGCCGCCACCTTCCATCTTCGTCGAAGCCACTTCCAGATCCGAGCGCTAG

Protein sequence

MKYLCFIVHTRNSASPFLSSPNRRRHQIPPPPEVAVQPLDPFVAPQSSILQPSVTRSFPCSAVTLHVQRSRVRIPSLFAPSSVSSEQLSPKPSVAPSSRAARARSRLVVRHPPTRSETSGLRPKPPPSIFVEATSRSER

Homology

The following BLAST results are available for this feature:

BLAST of Bhi06M000938 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi06M000938 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi06M000938 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..139

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi06G000938	Bhi06G000938	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi06M000938.utr5p1	Bhi06M000938.utr5p1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi06M000938.exon1	Bhi06M000938.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi06M000938	cds.Bhi06M000938	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi06M000938.utr3p1	Bhi06M000938.utr3p1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi06M000938	Bhi06M000938-protein	polypeptide