Bhi06M000283 (mRNA) Wax gourd (B227) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTATCGTACTGTTACTTAAAGGAAGGTTTCTCCATGGTGTTGGGCGACGAAATTGGCTCCGAGTAATTGGAGACAAACAAGACAAAACAATGAGCTCCAAAACCAACACACTCCCAAATCCTCTCAGAAGTTACCTTAGAAGAAGAAGAACCAAACGATCTTTAACCGATTCCCGCCGTCGCTTCCGCCGCCGTCACTGCCCCCCCCTCCGTTCTCCAATTCCGACCCCCTCACCGCCCTGCTGCTCCGACGTCTCCGCTAAATTGGAGGCCCTGCAGAGCCTCATTCCGCCACAATCCACCGCCGTCCACGGCCAACCCCGCCAAACGGATCAGTTGTTCAAGGAAACCGCCGATTACATTGTTTTATTGAAAACTCAGGTCGTCATTTTGCAGAAGCTGGTTGATTTTTTTGGATCCGCTTGCAGCGACGACTCTCAAAACGCCGTCGTTTCATAGTTTCTCTTTCTCTCCTTTTTTTTTTTCCCTCTTTTCTTTTTTCTTTTTTTTTTTTTAACTTCTTGTAATTATGAGAAAAAAATAAATTAAAAAAATTGAAAGAAAGAGTCCTGTTGTCTATATATATATATTTTTTTTTAAGTATAAATGTTTTAACTATAGATCTCATGGTTATTAACGCACTCAATTTAATCATCTTGTCTATGTCTTGTTTCTTCTGTCAATGATGGTTTATAGTACAAATTTTATGGAATAGGTAAATTGAAGGTTTATAGTACAAATTTTATGTCAATTGAGTCGTATTCATTTTGACGAAGTTT TTATCGTACTGTTACTTAAAGGAAGGTTTCTCCATGGTGTTGGGCGACGAAATTGGCTCCGAGTAATTGGAGACAAACAAGACAAAACAATGAGCTCCAAAACCAACACACTCCCAAATCCTCTCAGAAGTTACCTTAGAAGAAGAAGAACCAAACGATCTTTAACCGATTCCCGCCGTCGCTTCCGCCGCCGTCACTGCCCCCCCCTCCGTTCTCCAATTCCGACCCCCTCACCGCCCTGCTGCTCCGACGTCTCCGCTAAATTGGAGGCCCTGCAGAGCCTCATTCCGCCACAATCCACCGCCGTCCACGGCCAACCCCGCCAAACGGATCAGTTGTTCAAGGAAACCGCCGATTACATTGTTTTATTGAAAACTCAGGTCGTCATTTTGCAGAAGCTGGTTGATTTTTTTGGATCCGCTTGCAGCGACGACTCTCAAAACGCCGTCGTTTCATAGTTTCTCTTTCTCTCCTTTTTTTTTTTCCCTCTTTTCTTTTTTCTTTTTTTTTTTTTAACTTCTTGTAATTATGAGAAAAAAATAAATTAAAAAAATTGAAAGAAAGAGTCCTGTTGTCTATATATATATATTTTTTTTTAAGTATAAATGTTTTAACTATAGATCTCATGGTTATTAACGCACTCAATTTAATCATCTTGTCTATGTCTTGTTTCTTCTGTCAATGATGGTTTATAGTACAAATTTTATGGAATAGGTAAATTGAAGGTTTATAGTACAAATTTTATGTCAATTGAGTCGTATTCATTTTGACGAAGTTT ATGAGCTCCAAAACCAACACACTCCCAAATCCTCTCAGAAGTTACCTTAGAAGAAGAAGAACCAAACGATCTTTAACCGATTCCCGCCGTCGCTTCCGCCGCCGTCACTGCCCCCCCCTCCGTTCTCCAATTCCGACCCCCTCACCGCCCTGCTGCTCCGACGTCTCCGCTAAATTGGAGGCCCTGCAGAGCCTCATTCCGCCACAATCCACCGCCGTCCACGGCCAACCCCGCCAAACGGATCAGTTGTTCAAGGAAACCGCCGATTACATTGTTTTATTGAAAACTCAGGTCGTCATTTTGCAGAAGCTGGTTGATTTTTTTGGATCCGCTTGCAGCGACGACTCTCAAAACGCCGTCGTTTCATAG MSSKTNTLPNPLRSYLRRRRTKRSLTDSRRRFRRRHCPPLRSPIPTPSPPCCSDVSAKLEALQSLIPPQSTAVHGQPRQTDQLFKETADYIVLLKTQVVILQKLVDFFGSACSDDSQNAVVS Homology
BLAST of Bhi06M000283 vs. TAIR 10
Match: AT5G39240.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G29370.1); Has 15 Blast hits to 15 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 59.3 bits (142), Expect = 2.5e-09 Identity = 38/79 (48.10%), Postives = 50/79 (63.29%), Query Frame = 0
BLAST of Bhi06M000283 vs. TAIR 10
Match: AT3G29370.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G39240.1); Has 16 Blast hits to 16 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.8 bits (120), Expect = 8.8e-07 Identity = 39/107 (36.45%), Postives = 61/107 (57.01%), Query Frame = 0
BLAST of Bhi06M000283 vs. ExPASy TrEMBL
Match: A0A5D3BNP5 (Transcription factor UPBEAT1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002510 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 9.1e-36 Identity = 95/122 (77.87%), Postives = 101/122 (82.79%), Query Frame = 0
BLAST of Bhi06M000283 vs. ExPASy TrEMBL
Match: A0A6J1JTK8 (uncharacterized protein LOC111489609 OS=Cucurbita maxima OX=3661 GN=LOC111489609 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 6.2e-16 Identity = 71/119 (59.66%), Postives = 74/119 (62.18%), Query Frame = 0
BLAST of Bhi06M000283 vs. ExPASy TrEMBL
Match: A0A7J0EEI9 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_03g0016470 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 2.3e-10 Identity = 51/103 (49.51%), Postives = 67/103 (65.05%), Query Frame = 0
BLAST of Bhi06M000283 vs. ExPASy TrEMBL
Match: A0A5N6QW57 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_007655 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 3.0e-10 Identity = 51/96 (53.12%), Postives = 66/96 (68.75%), Query Frame = 0
BLAST of Bhi06M000283 vs. ExPASy TrEMBL
Match: A0A2C9WB72 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G054200 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 3.0e-10 Identity = 50/109 (45.87%), Postives = 70/109 (64.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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