Bhi03M000855 (mRNA) Wax gourd (B227) v1

Overview


Name	Bhi03M000855
Type	mRNA
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr3: 22686015 .. 22686944 (-)
Sequence length	300
RNA-Seq Expression	Bhi03M000855
Synteny	Bhi03M000855

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAGGTGGTGCATCATCATAATCCCTATGTCTATGTGGGCAGCAAGGTTTCCGTAATGAGAGACAAAAGACTTGAGGAGGAGGTGCAAAAGTTGGTAATCAAGAGGGTAAGTCTTGCTCCGAGTATTTTATCTTTTCTTTCAAATATTCTTGGCGTCCTCAACACATGAATCATTTTGTTCAGAATATACAAATAGAAAGGGAATGAGTATAATCATTGGAGATAGATATTAAAGTATTTGTATGAACTTTTTGATATACATGGGTAAGAATGAGTTTGACGTAACTTTCAAAACAGTGACAAGTAGAAGTTAGTAAGGGGCAGTTATGATAACTTTCTTTTTTAAAAGAGGAAGAGATATGTAAATATTCTTTCTTCTAAAGTTCAGACAATAATAATAACAATAAGATTAAAATGTAAATTTGGTCTCTATAGTTTAGATAAAGTTAAAATTGAGACCTTATGATTGGATAAATTCTTATAAATAGTCTCTATGGTAGAAGCTATTTATAAGGTTTTTATTAGAGCATATGGATGATTTATGAAATTTTATCAAACCAACTGGATTAAATTCTAACTTTTAAAATCATAGGAACTACACTCTTAACTCTTTTCAAACCACGGGAACCAAATCTGTAATTTAACCTAATAGTTAAGGACAATTACTTAAAAGTTCTACTTTTGAAAGTTATTGGAAACTCACCTTCAGTATTCTCATCGGATGTGTCTTCTGTAGCTTGTCACAGATTGGAATAGTAGAGTGCTAGGGGGCAAGGATTATTTGTATTGGCCTAACATCAAATTCCACCATCTCCATCGTCAAGGCCTAATGTTGATGAAATTAGGCCCATGGCCAAATCAATACCTGAAGAAAGGGCCACAAAAACCTAAGAATCCAAGAGGTGGGAGATATATGTCTCATTAG

mRNA sequence

ATGGGGAAGGTGGTGCATCATCATAATCCCTATGTCTATGTGGGCAGCAAGGTTTCCGTAATGAGAGACAAAAGACTTGAGGAGGAGGTGCAAAAGTTGGTAATCAAGAGGCTTGTCACAGATTGGAATAGTAGAGTGCTAGGGGGCAAGGATTATTTGTATTGGCCTAACATCAAATTCCACCATCTCCATCGTCAAGGCCTAATGTTGATGAAATTAGGCCCATGGCCAAATCAATACCTGAAGAAAGGGCCACAAAAACCTAAGAATCCAAGAGGTGGGAGATATATGTCTCATTAG

Coding sequence (CDS)

ATGGGGAAGGTGGTGCATCATCATAATCCCTATGTCTATGTGGGCAGCAAGGTTTCCGTAATGAGAGACAAAAGACTTGAGGAGGAGGTGCAAAAGTTGGTAATCAAGAGGCTTGTCACAGATTGGAATAGTAGAGTGCTAGGGGGCAAGGATTATTTGTATTGGCCTAACATCAAATTCCACCATCTCCATCGTCAAGGCCTAATGTTGATGAAATTAGGCCCATGGCCAAATCAATACCTGAAGAAAGGGCCACAAAAACCTAAGAATCCAAGAGGTGGGAGATATATGTCTCATTAG

Protein sequence

MGKVVHHHNPYVYVGSKVSVMRDKRLEEEVQKLVIKRLVTDWNSRVLGGKDYLYWPNIKFHHLHRQGLMLMKLGPWPNQYLKKGPQKPKNPRGGRYMSH

Homology

The following BLAST results are available for this feature:

BLAST of Bhi03M000855 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi03M000855 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi03M000855 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi03M000855 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..99

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi03G000855	Bhi03G000855	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi03M000855.exon2	Bhi03M000855.exon2	exon
Bhi03M000855.exon1	Bhi03M000855.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi03M000855	cds.Bhi03M000855_2	CDS
cds.Bhi03M000855	cds.Bhi03M000855	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi03M000855	Bhi03M000855-protein	polypeptide