Bhi02M000930 (mRNA) Wax gourd (B227) v1

Overview


Name	Bhi02M000930
Type	mRNA
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	FRIGIDA-like protein
Location	chr2: 25832441 .. 25832728 (-)
Sequence length	288
RNA-Seq Expression	Bhi02M000930
Synteny	Bhi02M000930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAAGCAGGAGAGGAAAACCATCAGATTGGGGAATTGGAGAGGCGAAAATAAGCAGCCCAATATGTGGAAGGCTTTGTGGAGGAAGTTGAGAAGAGAAAAGAGGAAGACGTTTCATTCTTCAGGCCCCAAGTTGATTCCTTACGATCCCTTCTCTTATTCTCAGAATTTCGATCAAGGTACCACCGCTGATGAACTCGATAATCTTTCCCGATCCTTCTCCGCCCGCTTTGCTCTCGCCGATGTTACTTCTGCTATCTTTCTTCACAAACAGCATCTTCAATGA

mRNA sequence

ATGGGAAAGCAGGAGAGGAAAACCATCAGATTGGGGAATTGGAGAGGCGAAAATAAGCAGCCCAATATGTGGAAGGCTTTGTGGAGGAAGTTGAGAAGAGAAAAGAGGAAGACGTTTCATTCTTCAGGCCCCAAGTTGATTCCTTACGATCCCTTCTCTTATTCTCAGAATTTCGATCAAGGTACCACCGCTGATGAACTCGATAATCTTTCCCGATCCTTCTCCGCCCGCTTTGCTCTCGCCGATGTTACTTCTGCTATCTTTCTTCACAAACAGCATCTTCAATGA

Coding sequence (CDS)

ATGGGAAAGCAGGAGAGGAAAACCATCAGATTGGGGAATTGGAGAGGCGAAAATAAGCAGCCCAATATGTGGAAGGCTTTGTGGAGGAAGTTGAGAAGAGAAAAGAGGAAGACGTTTCATTCTTCAGGCCCCAAGTTGATTCCTTACGATCCCTTCTCTTATTCTCAGAATTTCGATCAAGGTACCACCGCTGATGAACTCGATAATCTTTCCCGATCCTTCTCCGCCCGCTTTGCTCTCGCCGATGTTACTTCTGCTATCTTTCTTCACAAACAGCATCTTCAATGA

Protein sequence

MGKQERKTIRLGNWRGENKQPNMWKALWRKLRREKRKTFHSSGPKLIPYDPFSYSQNFDQGTTADELDNLSRSFSARFALADVTSAIFLHKQHLQ

Homology

[Close]

BLAST of Bhi02M000930 vs. TAIR 10
Match: AT2G25735.1 (unknown protein; Has 31 Blast hits to 31 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 2.2e-05
Identity = 37/87 (42.53%), Postives = 44/87 (50.57%), Query Frame = 0


Query: 6   RKTIRLGNWR---GENKQPN-------MWKALWRKLRREKRKTFHSSGPKLIPYDPFSYS 65
           R+TI LG +     E KQ          WK L  KL   K     +S  K++ Y+P  YS
Sbjct: 23  RETIVLGRYSKSCREQKQHQRRERLLPKWKVLLMKL---KLLPSRASSTKVVAYEPCDYS 82

Query: 66  QNFDQGT---TADELDNLSRSFSARFA 80
            NFDQG      DE +NLSRSFS RFA
Sbjct: 83  LNFDQGPGWHDHDEPENLSRSFSCRFA 106

[Close]

BLAST of Bhi02M000930 vs. NCBI nr
Match: KAE8653121.1 (hypothetical protein Csa_019717, partial [Cucumis sativus])

HSP 1 Score: 159.1 bits (401), Expect = 1.9e-35
Identity = 83/103 (80.58%), Postives = 85/103 (82.52%), Query Frame = 0


Query: 1   MGKQERKTIRLGNWRGENK-QPNMWKALWRKLRREKRK--------TFHSSGPKLIPYDP 60
           M KQ R TIRLG WRGENK QPNMWK LWRKLRREKRK        TF+SSGPKLIPYDP
Sbjct: 9   MRKQGRTTIRLGGWRGENKQQPNMWKVLWRKLRREKRKILESSNTTTFYSSGPKLIPYDP 68

Query: 61  FSYSQNFDQGTTADELDNLSRSFSARFALADVTSAIFLHKQHL 95
           FSYSQNFDQGT  +ELDNLSRSFSARFALADV SA FLHKQHL
Sbjct: 69  FSYSQNFDQGTAGEELDNLSRSFSARFALADVASATFLHKQHL 111

[Close]

BLAST of Bhi02M000930 vs. NCBI nr
Match: KAG6587950.1 (hypothetical protein SDJN03_16515, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 113.2 bits (282), Expect = 1.2e-21
Identity = 64/94 (68.09%), Postives = 67/94 (71.28%), Query Frame = 0


Query: 1   MGKQERK-TIRLGNWRGENKQPNMWKALWRKLRREKR-KTFHSSGPKLIPYDPFSYSQNF 60
           MGK+  K TIRLG WR    QPN+WK LWRKLRREKR KT   S   LIPYDPFSYS NF
Sbjct: 152 MGKKSSKQTIRLGRWR-SGYQPNLWKVLWRKLRREKRNKTTTYSSGNLIPYDPFSYSHNF 211

Query: 61  DQGTTADELDNLSRSFSARFALADVTSAIFLHKQ 93
           DQG  A+E D L RSFSARFALAD  SA FL  Q
Sbjct: 212 DQGNAAEEPDILCRSFSARFALADAASAFFLDNQ 244

[Close]

BLAST of Bhi02M000930 vs. NCBI nr
Match: KAG7021839.1 (hypothetical protein SDJN02_15567, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 110.5 bits (275), Expect = 7.8e-21
Identity = 62/94 (65.96%), Postives = 67/94 (71.28%), Query Frame = 0


Query: 1   MGKQERK-TIRLGNWRGENKQPNMWKALWRKLRREKR-KTFHSSGPKLIPYDPFSYSQNF 60
           MGK+  K TIRLG WR    QPN+WK LWRKLRR+KR KT   S   LIPYDPFSYS NF
Sbjct: 152 MGKKSSKQTIRLGRWR-SGYQPNLWKLLWRKLRRQKRNKTTTYSSGNLIPYDPFSYSHNF 211

Query: 61  DQGTTADELDNLSRSFSARFALADVTSAIFLHKQ 93
           DQG  A++ D L RSFSARFALAD  SA FL  Q
Sbjct: 212 DQGNAAEDPDILCRSFSARFALADAASAFFLDNQ 244

[Close]

BLAST of Bhi02M000930 vs. NCBI nr
Match: TKY44653.1 (hypothetical protein E2542_SST30930 [Spatholobus suberectus])

HSP 1 Score: 86.7 bits (213), Expect = 1.2e-13
Identity = 38/56 (67.86%), Postives = 45/56 (80.36%), Query Frame = 0


Query: 24 WKALWRKLRREKRKTFHSSGPKLIPYDPFSYSQNFDQGTTADELDNLSRSFSARFA 80
          WK LW KL++EK+K F S+ P  +PYDP++YSQNFDQGT  DE DNLSRSFS RFA
Sbjct: 37 WKVLWMKLKKEKKKLFESASPLQVPYDPYTYSQNFDQGTAKDEPDNLSRSFSVRFA 92

[Close]

BLAST of Bhi02M000930 vs. NCBI nr
Match: RDX89602.1 (hypothetical protein CR513_28657, partial [Mucuna pruriens])

HSP 1 Score: 86.3 bits (212), Expect = 1.6e-13
Identity = 38/56 (67.86%), Postives = 45/56 (80.36%), Query Frame = 0


Query: 24  WKALWRKLRREKRKTFHSSGPKLIPYDPFSYSQNFDQGTTADELDNLSRSFSARFA 80
           WK LW KL++EK+K F S+ P  +PYDP++YSQNFDQGT  DE DNLSRSFS RFA
Sbjct: 45  WKMLWMKLKKEKKKLFESASPVQVPYDPYTYSQNFDQGTAKDEPDNLSRSFSVRFA 100

[Close]

BLAST of Bhi02M000930 vs. ExPASy TrEMBL
Match: A0A0A0LWX3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G370510 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 9.3e-36
Identity = 83/103 (80.58%), Postives = 85/103 (82.52%), Query Frame = 0


Query: 1   MGKQERKTIRLGNWRGENK-QPNMWKALWRKLRREKRK--------TFHSSGPKLIPYDP 60
           M KQ R TIRLG WRGENK QPNMWK LWRKLRREKRK        TF+SSGPKLIPYDP
Sbjct: 4   MRKQGRTTIRLGGWRGENKQQPNMWKVLWRKLRREKRKILESSNTTTFYSSGPKLIPYDP 63

Query: 61  FSYSQNFDQGTTADELDNLSRSFSARFALADVTSAIFLHKQHL 95
           FSYSQNFDQGT  +ELDNLSRSFSARFALADV SA FLHKQHL
Sbjct: 64  FSYSQNFDQGTAGEELDNLSRSFSARFALADVASATFLHKQHL 106

[Close]

BLAST of Bhi02M000930 vs. ExPASy TrEMBL
Match: A0A371GGA5 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_28657 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.7e-14
Identity = 38/56 (67.86%), Postives = 45/56 (80.36%), Query Frame = 0


Query: 24  WKALWRKLRREKRKTFHSSGPKLIPYDPFSYSQNFDQGTTADELDNLSRSFSARFA 80
           WK LW KL++EK+K F S+ P  +PYDP++YSQNFDQGT  DE DNLSRSFS RFA
Sbjct: 45  WKMLWMKLKKEKKKLFESASPVQVPYDPYTYSQNFDQGTAKDEPDNLSRSFSVRFA 100

[Close]

BLAST of Bhi02M000930 vs. ExPASy TrEMBL
Match: A0A151S3I6 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_028966 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.0e-13
Identity = 38/56 (67.86%), Postives = 44/56 (78.57%), Query Frame = 0


Query: 24 WKALWRKLRREKRKTFHSSGPKLIPYDPFSYSQNFDQGTTADELDNLSRSFSARFA 80
          WK LW KL++EK+K F S+ P  +PYDP+SYSQNFDQGT  DE DNLSRSF  RFA
Sbjct: 35 WKVLWMKLKKEKKKLFESASPLQVPYDPYSYSQNFDQGTAKDEPDNLSRSFCVRFA 90

[Close]

BLAST of Bhi02M000930 vs. ExPASy TrEMBL
Match: A0A371EY61 (FRIGIDA-like protein (Fragment) OS=Mucuna pruriens OX=157652 GN=FRL4A PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.1e-12
Identity = 43/84 (51.19%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 6   RKTIRLGNWRGENKQPN----------MWKALWRKLRREKRKTFHSSGPKLIPYDPFSYS 65
           R+TI+LG    E    N           WK LW KL++EK+K F S+ P  +PYD ++YS
Sbjct: 41  RRTIQLGKCHNEIVHVNSVSAIGTTKLRWKLLWMKLKKEKKKLFESASPLQVPYDQYTYS 100

Query: 66  QNFDQGTTADELDNLSRSFSARFA 80
           QNFDQG + DE DNLSRSFS RFA
Sbjct: 101 QNFDQGISLDEPDNLSRSFSVRFA 124

[Close]

BLAST of Bhi02M000930 vs. ExPASy TrEMBL
Match: I1KIS1 (Uncharacterized protein OS=Glycine max OX=3847 GN=102669499 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.4e-12
Identity = 41/70 (58.57%), Postives = 50/70 (71.43%), Query Frame = 0


Query: 24  WKALWRKLRREKRKTFHS-SGPKLIPYDPFSYSQNFDQGTTADELDNLSRSFSARFALAD 83
           WK LW KL++EK+K F S S P  +PYDP++YSQNFDQGT  DE DN SRSFS RFA   
Sbjct: 37  WKVLWMKLKKEKKKLFESASSPLQVPYDPYTYSQNFDQGTAKDEPDNFSRSFSVRFA-DP 96

Query: 84  VTSAIFLHKQ 93
            TS + + K+
Sbjct: 97  STSRVLMKKR 105

The following BLAST results are available for this feature:

BLAST of Bhi02M000930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25735.1	2.2e-05	42.53	unknown protein; Has 31 Blast hits to 31 proteins in 9 species: Archae - 0; Bact...	[more]

BLAST of Bhi02M000930 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi02M000930 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8653121.1	1.9e-35	80.58	hypothetical protein Csa_019717, partial [Cucumis sativus]	[more]
KAG6587950.1	1.2e-21	68.09	hypothetical protein SDJN03_16515, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7021839.1	7.8e-21	65.96	hypothetical protein SDJN02_15567, partial [Cucurbita argyrosperma subsp. argyro...	[more]
TKY44653.1	1.2e-13	67.86	hypothetical protein E2542_SST30930 [Spatholobus suberectus]	[more]
RDX89602.1	1.6e-13	67.86	hypothetical protein CR513_28657, partial [Mucuna pruriens]	[more]

BLAST of Bhi02M000930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWX3	9.3e-36	80.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G370510 PE=4 SV=1	[more]
A0A371GGA5	7.7e-14	67.86	Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_28657 P...	[more]
A0A151S3I6	1.0e-13	67.86	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_028966 PE=4 SV=1	[more]
A0A371EY61	1.1e-12	51.19	FRIGIDA-like protein (Fragment) OS=Mucuna pruriens OX=157652 GN=FRL4A PE=3 SV=1	[more]
I1KIS1	1.4e-12	58.57	Uncharacterized protein OS=Glycine max OX=3847 GN=102669499 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33168:SF44	EXPRESSED PROTEIN	coord: 19..93
None	No IPR available	PANTHER	PTHR33168	STRESS INDUCED PROTEIN-RELATED	coord: 19..93

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi02G000930	Bhi02G000930	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi02M000930.exon1	Bhi02M000930.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi02M000930	cds.Bhi02M000930	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi02M000930	Bhi02M000930-protein	polypeptide