Tan0022836 (gene) Snake gourd v1

Overview
NameTan0022836
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptiontrigger factor-like isoform X3
LocationLG06: 22389451 .. 22396093 (+)
RNA-Seq ExpressionTan0022836
SyntenyTan0022836
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAGAAAACAATATTTCAATTTGTAGTTAAACTGAGCATGGTTTCTGGTTGAAACGAAAACCAGCGTCTGAAGGAGACGCAGGTTCAGTTCGGTGAAGTGGATAAGAGCAACGAAAGAGACGATGGAAATTACTGCTACCAACTTCTCTCTTCGTGCAAATCCCAAGGTAAACCATCCCTTCTATCCAGCACAATTTGTGTTTCTCTGCCATTTTCCGATCAACTTTCACAATCATGAATCGATGGAATTTTGAGTTTGTTACTGAACTATGTTGAGTGGGAAAAGAAGGAGAGATGAAGTAAACAATAACACTGATATTGTGTATTTGCTCAGTACAATTTGAGCTAACATAGAAGTGTAAGTGTTGTTTTTTTTGGCAAAATATTAGAAGAGGAAAAGTTCCGGAAAGTTAACACGGAGTGATAGGTTTCGAGTGCTATAAAAAAGGGTTTATGACTTTGATTTTGTTTTGTCTCAGTTAGAAACACCTTGGTGTACCCTCTCTAGTTTAACTATTATCTAGTATTCTAGTGGTGAGAAGGGCGTGAGTGGTTTTGGGAGAGTGTTTTTGTAATTGGGGTCGAGTAGGGAATTACGTGTGATTGTAATAATTTTTCAAATAGTGAAGTTTCTTTTTAGTTGGGCTGTAGATTTTTCTCTGATTTGGGAGCTTTTCACGTAAATTCTTGTGTATGTTAGTGGAGTGGGCGTGGGAGGTTTTTTCCCAACAAGAAGGTGCTGCTGACCGAACTGATTTTGGTTTTGGTGAGAAGTACTATTTATTTTCAATTGAGAGGTTTCTAGTTGATAACATGAATTCAATCTGTGAAAGCACTGGCAGTAATGTGTCCCAATTTTCCACTTATTTTGAATTTTGGCTTTGTCTGATTGTTGTGTCTATCATGGGGAGTACCAAAAAAGGAAAATTTGCGCTGAGTTTTGTAGCATTCCATGAAAGTAATTGAAGGATATGTTGTTGTTTGTAGAGGAAGGAGGTTTAACATAGGTACTCTGGAAATTTGGCTTCTGGTAGTTGGCTGGCTTGTGAGTGGACATATTGAGGCTTGCAATATTTGCTTGAAGTAGGAGTACTTTGTCTGATAGCTTTTGTTCATAGATCGAAAGCATGCTTTTTAAGTCCTCAAAGTTTGAGTGCCCCTTTCGGCACCAAGGGCAGCCACAAAAGCCTTAAAATTCTTAAGACAATTCAACAAATATTCAACCAAAAGTTTATTAGTTATAGGTTCCCCAACAATTAAGTTTTCTTATCCATGAAGTATTCTAGAATAGTTTGACCTTCAAGCTTCATATTATTATTATATGTATAATAATACTCCTCTCGAGAAGTATTATTATACATATGTGCTGGGGCATACCAGATTGAGCAAGCATCATTATACTTCACTATTCTCGCCACGATCTTACCGGTCAAAGAAGAATAAAGCCAACTCATAACTGAACGATTATGCCTTTGCCATGCGGTATGTTCTCAGGGGATAGGTTCAGCATTTCAACGTCAAGAAATTGTTAAGATAAAGCCAACTCATAAATGAACGATTATGCCTTTGCCATGCGGTATATTCTCAGGGGTTAGGTTCAGCATTTCAACGTCAAGAAATTGTTAAGGGCACGGTTTACTTCCATCTATATGGCGTAGATTGTTTGCAACAATAATATTCAGTTGTTGATTTTGTCATAAGAGATAATTGAATTTTATCATTGAGTTTCACAGTCAGAAAATGATTTAAAGATGAAAAAGTCTTGTGGTTATGGGCAACAACAAGATTGGGGTTTGGATTTTTGTCATTTGGCTCAGTTGTGGAATGTTTGTTTGGTTCAGCTTGTGTTGGAAGAATAGGGGAAGCAGAACAGGTCCTGCTAGTCGAAGGTGATGCCATTTGACTTAAGCCTTGAGCAAAGGTTTTGATACCATGAACGATGTATTGTAGACTGACCAAGGAAGAAGAAAGGCAACAACAGAGAATGGTAGTAGAAAGCAATAGCATAGGCCGCTGTGCAATAGCTCAACATAATGTGTGCGACTTAACGACTTCCTAGTTTTATCAAAATTATATTTAAACAAAGAAAAGCAGTACCACCTCGTACATAAGTAATGAACTGCAACAAGAGAACATAATAGCTAGGATAGTTTTGAGGTCTTCGCTTGAAAGCTTCTACTTGGTGTGTTCTTTCCAAAGACTTTGCTAATTATTCTATTTCTGATCTATGTCTTTCATGACACCCGTTTTTATCTGGTATTTGTTATATGTTGGGTTTCTCTGGGTTTTTTGTTTTTGGAACCAAGGATTTGGATGTGTTTGTTGTGGGTTTCTCGGTTTTTTATCCTATGGTGTTAGCTATTTTCTGTTTTTTTTTCGTCTCTCTTGTATTTTGAGCGTTAGTCTCTTTTCATTATATCAATGAAATCTCTTTTGTTGCCTTGTCAAAAAAAGATAACATGCAGTCAGCTAAGGTAATGACATAGGAAGTAATATTATACCCTAAAAGTTATCTGGTCACATACTTTGTGGCTCATGCTTGTTTTGTTGGGGGTTCTAAGTTTATACCTGAAGTAGTTTCAGAGGAGGTATTATTTATTTATTTATTTATTTTCTGAAAATGGTTGGTTTATACGATCTTAGAGATGTCTACCTTACTCTCAAATTTTCTTTCATTTCTAATTATGGTCTCTCTGTTGGTATTCATCTGAAGTTTGTTCATTCTTATCCAATCTTCTTTCTTCATGGTAGGTTATATATCATAAGCAGACAGCTAATTACTTTACTCCAAGCCTCGCCTGTAAAAGTGTGTCTTTTCCCAGTCAGGTGGGATACTGTAGTAGAAAAATTTCTTTGAGGTAACTCCAATCTTATTTTACCGAATTATGTTGCAAAGTAGTTCCATAAGCCAAATTATGAAAGTTGATCATGTCCCAAATTAGGAAGACTTCAGCACTTCAGCACCTAATTTATTTACTCTGAACTTCCCTTTCATATGATGAAGCTAATTGGTTGACCATCAAAGTTTACAAAACATATAAACTCATAAGAGACTTGATTTACCGGGAAATTTTGACTTCTAATGTGAATGGATATACAAATGCTCATGATTTGCTTCATTTCTCACAATTGGATTCTGCACGCCCTGTTTTGTTATTTACAAATTACAGTGACGAATAGGTGCATCTTAGTGGATTGTGACAGCAGTGTTCTGTTCTGTTCTGTTATTTAGTCACTTCAAAACAGAAAGTTTAGATGATGCAATTGCCATCAAGACCATAACTAAATTTTGGGATGGAATTTCTTTGGTAATGAAAAATCCAACTCTTATCTCAATGAAACCACAGAAAAGGCCACCAGTGGAAGGAGCATACCAAAAAAGAAATACAAGAACAACGCTAACTGTTTGCTATTAAATTGTTGGTTAAAATTTTATCATTTACCTTTTGTTGAATCACTACTAAACCTAAAATCAGTAAATTTAATCTTTCGTGGATCCGGAAATTAGCACAAGATCAAGTGGATTATTGGTTTTAATTTCAGTTAAGGGGAAATGATATTTTAAAGTTTGAACTTAACACCATATGATCCGAAACTAGGTTAGATCATCACTAAACTAAATAACTTAAGATGAATGAACTCAACTATAATTAAGAACATTGGCATGATGGTTAGACTTTTATTTGGAAATGTTTTGATTGTTTAAAAAGGCACATTGGCATCATTTGTGGCTGCTTCATCTAATTTAGGTTGCGTGTATGCCATTTCAACTGCATATGTAGCCATCATCATTTGCATGGTTTTGAATGACAAGGAGAGTTGCCTATGCTTCTAATCATAAAAATTATTTGTTCATTTTACAGTAAAAGTGACAGATATCTTCCAGCTGCTTGTGCTGTGTTATCAGGTAGGAATCCATCTCTCTTCCTAGGGCATTTCCAAAATTTTCCATTTGTAGAAGGACTATGTTGGATAAATTTTTTAATTCTGTTGTGTGCAGAAGATGTGAGTGTTTCTTCTTTTCAGTTTGAAGACTTCTCTGTCACTAATGCTACTAATATCGATGACAGTAGAGAACTAAAGGTATGAAATACGGTGAGTTTTGTTCGTAGCTTTATTCTCAGGTTCCTTACGTCTGTACCCCCACAGAATTTTATTGTTGGTTTAATCCTATTTGGGTCCTTGGCTTTCATTGTTATTTTGTTTTGCTTCCTGACCTTTCAAATATTCCGTTTTCAACTATTAAACATTCTATTTATTCCCCAAGTTTTGTATACTAACTATTCTAGGCCTTGCCTTTAATTTTTCATTAATCATTTAACAAAAGTCTGGCTTCATTTCAAAACCCAACATTTAATCTACTAGTGGCTTCAAACACCTATCCACCAATACCATAGACATCTAGTGATAAGGTAAATAAATAAAGGATGTGTTAATATTAGGTTTCTGTTAAACAATTTATAAAAAACTAATGGTAGGGATTAAAATAATTCTTATGCAAATTTTAGGGACTGAAACAATATATTTTAAAGTTAAAAGAGACTAGAATAAGATAAGGATGAAATTCATGGACCGAAATTAAATTCAAAACCTATTGTTTTATGCACAAATACTTAATGCAGATATTGAAACCATGCTAACTTGTATCGAATTTGCAACCAGATTCGTGTAGAGGTGTTCGGTACCAAAACTCGAGCAATTTTCAACAATATCTTTGATGAAATGGTTGCTGAAGCTCAGCCTATTCCAGGTTTCAGAAGAGTGAAAGGAGGTAATATCCAGAGGCATGTTTCTTACTTAGAGAAATGGAAATGTTACTAAATGACCCATTAACGATCAGAAAATGGCTTCCTTCAATTTGGTTTCTCACACTGTTTTCATTTTTATTATCCTTTCCAATTCATTTTATTGGACTTGAGCAATGGTGATCTTCATCCGATGTCAGGAAAGACGCCAAATGTAAGTACTCTTTCTTTTCAATCTCTTGGATTTCAGGAAGCAACTGACAATCTTATTAGTGAAGATAGGGAGGTTGAATACTGATAAGTTTATCAATTGCTTTTAACAGATACCCCGAGACATTCTATTAGAGATACTAGGACCTTCTAAGGTGTACAAGCAAGTTATTAAGAAAGTTATCAACTCTACTGTTGCTGCATATGTGGAAAAGGTAAAAATATTGTCATTTTCATTTTCTGATTTATATATATCCCTCATCTTCCTGGGCTCACCTTATGTGAAACTGGTTGCGTTGGGCCTGTTACGATTAGTTAGCATACAAGATTTAACAGCAATAAAAATCGTCGTCTTTTCGTTTATATTGTAATTTCTAGATTATTTTATGATAGACCTATGAGATTTTCATATAGAAATAGGAATATAAAGACTGGAAAATGAAAACTGACCTCTTATCTCAATGATAACTCGAGGGATATATACATAACGTTTCTGAGTTCAACAACATAGGGTGGGGAATAGTTTAATAGCCAACCTGGGGTGCAGCTAGTGTTGTGCATCCCATTTTTCCTCTCACAAGATTTTTCTCCTTAAAAAAAACCAATTTTTTTTTTTTTTTTTTGTTGTTGTGGTTATCAAGTGGGCATGCTGCACTCAAGTATTTTCCATAATTTGAATGTCTGCTCAAGTTGACATACTCTAGAGGAATATTAAGCTAATAGAACTGAGACATGAGACATGGGTTGAATATAAGATAATATAATATAATAGAACCCCTTTGATTGAGGTCATGTATAAACAATGTTTAGGCTTTGACTTTTCTGTTTTTCTTTAATTAAAAAAAGGAAAAAATGAATTACTTGTCAACTTGGATAAATTATTACCTTTTCATCAAATTACCCCCACAAACATAGATAAGTGTTGCAATTTTCACCCTAAACTTGCAAAGTATTACAATTTTTACCCTCTTAACATTTTTTGATCGAAAAATTGTTTAAAAAATATTTTCATACATGTTCAATGAATTATAAAATATATGTATAGTACAAAATTGATAGTATGTGAAAAAAAAAACATTAGAGCTAAATTTTTGTTGAAATTTGTGTGTTTTGGGTCTTTGGCAAAGTTATTTAATGGGTAATGTGTGTATTAATCAACCTTAAATTTGTGCAATTGATATTATTGAAATGAGTGAGTTTACAAAAATTTTCTCTTTGCTTTTTTGTTAAAATCAGAGGGTGAATTAGCAACAATTGAACAAAAGGTAAAAATTTGAATACTTATCAAAGTGTTTTTTTTCCTATTTGCTGGAAAATTTTACCATTGTAGCAGGAAGCTCTAAAAGTGGGTAAAAACTTGAGAATAGAGCAAAGCTATGAGGATCTTGAAGACCAATTTGAACCAGATGAGAAGTTCTTTTTTGATGCCATTATTCAGCTCAAGGAAACAAACTGAACTATTGAACTATGTTTAATATACATACTTTCACTCGAATTTGCAATTCCGCGAGGAATCTCTTTATTAGGTTGCATTATTTGTTTATTTTGGGTAATGGCTATCACCAATTCAACAGGAATTATAGTATGCTGGAGCGCCTGAACTAAGTCATTTTTTCTCCCTTAAGGAGCTATTTGGCCCAAACGAGTTGCAGGAAGTTAGAATTTGGAGAGTAGGTGTTAGGAAG

mRNA sequence

AAAAAAGAAAACAATATTTCAATTTGTAGTTAAACTGAGCATGGTTTCTGGTTGAAACGAAAACCAGCGTCTGAAGGAGACGCAGGTTCAGTTCGGTGAAGTGGATAAGAGCAACGAAAGAGACGATGGAAATTACTGCTACCAACTTCTCTCTTCGTGCAAATCCCAAGGTTATATATCATAAGCAGACAGCTAATTACTTTACTCCAAGCCTCGCCTGTAAAAGTGTGTCTTTTCCCAGTCAGGTGGGATACTGTAGTAGAAAAATTTCTTTGAGTAAAAGTGACAGATATCTTCCAGCTGCTTGTGCTGTGTTATCAGATGTGAGTGTTTCTTCTTTTCAGTTTGAAGACTTCTCTGTCACTAATGCTACTAATATCGATGACAGTAGAGAACTAAAGATTCGTGTAGAGGTGTTCGGTACCAAAACTCGAGCAATTTTCAACAATATCTTTGATGAAATGGTTGCTGAAGCTCAGCCTATTCCAGGTTTCAGAAGAGTGAAAGGAGGAAAGACGCCAAATATACCCCGAGACATTCTATTAGAGATACTAGGACCTTCTAAGGTGTACAAGCAAGTTATTAAGAAAGTTATCAACTCTACTGTTGCTGCATATGTGGAAAAGGAAGCTCTAAAAGTGGGTAAAAACTTGAGAATAGAGCAAAGCTATGAGGATCTTGAAGACCAATTTGAACCAGATGAGAAGTTCTTTTTTGATGCCATTATTCAGCTCAAGGAAACAAACTGAACTATTGAACTATGTTTAATATACATACTTTCACTCGAATTTGCAATTCCGCGAGGAATCTCTTTATTAGGTTGCATTATTTGTTTATTTTGGGTAATGGCTATCACCAATTCAACAGGAATTATAGTATGCTGGAGCGCCTGAACTAAGTCATTTTTTCTCCCTTAAGGAGCTATTTGGCCCAAACGAGTTGCAGGAAGTTAGAATTTGGAGAGTAGGTGTTAGGAAG

Coding sequence (CDS)

ATGGAAATTACTGCTACCAACTTCTCTCTTCGTGCAAATCCCAAGGTTATATATCATAAGCAGACAGCTAATTACTTTACTCCAAGCCTCGCCTGTAAAAGTGTGTCTTTTCCCAGTCAGGTGGGATACTGTAGTAGAAAAATTTCTTTGAGTAAAAGTGACAGATATCTTCCAGCTGCTTGTGCTGTGTTATCAGATGTGAGTGTTTCTTCTTTTCAGTTTGAAGACTTCTCTGTCACTAATGCTACTAATATCGATGACAGTAGAGAACTAAAGATTCGTGTAGAGGTGTTCGGTACCAAAACTCGAGCAATTTTCAACAATATCTTTGATGAAATGGTTGCTGAAGCTCAGCCTATTCCAGGTTTCAGAAGAGTGAAAGGAGGAAAGACGCCAAATATACCCCGAGACATTCTATTAGAGATACTAGGACCTTCTAAGGTGTACAAGCAAGTTATTAAGAAAGTTATCAACTCTACTGTTGCTGCATATGTGGAAAAGGAAGCTCTAAAAGTGGGTAAAAACTTGAGAATAGAGCAAAGCTATGAGGATCTTGAAGACCAATTTGAACCAGATGAGAAGTTCTTTTTTGATGCCATTATTCAGCTCAAGGAAACAAACTGA

Protein sequence

MEITATNFSLRANPKVIYHKQTANYFTPSLACKSVSFPSQVGYCSRKISLSKSDRYLPAACAVLSDVSVSSFQFEDFSVTNATNIDDSRELKIRVEVFGTKTRAIFNNIFDEMVAEAQPIPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKKVINSTVAAYVEKEALKVGKNLRIEQSYEDLEDQFEPDEKFFFDAIIQLKETN
Homology
[Close]
BLAST of Tan0022836 vs. ExPASy Swiss-Prot
Match: B1XL18 (Trigger factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=tig PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 9.4e-06
Identity = 28/117 (23.93%), Postives = 66/117 (56.41%), Query Frame = 0 

Query: 90  ELKIRVEVFGTKTRAIFNNIFDEMVAEAQPIPGFRRVKGGKTPNIPRDILLEILGPSKVY 149
           ++ + +EV    T+  +++   ++ A    +PGFR+ K      +P+ IL++ LGP+++ 
Sbjct: 12  QVGLEIEVPADVTQKAYDDTVRKL-ARTVNLPGFRKGK------VPKQILIQRLGPNRIK 71

Query: 150 KQVIKKVINSTVAAYVEKEALKVGKNLRIEQSYEDLEDQFEPDEKFFFDAIIQLKET 207
             V++ +I+ ++ A + +E ++   N +++ S++DL   ++P E   F A + +  T
Sbjct: 72  ASVLEDLIDDSLKAAIAQENIEALGNFQLKSSFDDLISAYKPGEASSFKAAVDVPAT 121

[Close]
BLAST of Tan0022836 vs. NCBI nr
Match: XP_038876224.1 (trigger factor isoform X2 [Benincasa hispida])

HSP 1 Score: 345.1 bits (884), Expect = 4.1e-91
Identity = 177/208 (85.10%), Postives = 193/208 (92.79%), Query Frame = 0 

Query: 1   MEITATNFSLRANPKVIYHKQTANYFTPSLACKSVSFPSQVGYCSRKISLSKSDRYLPAA 60
           M+I ATNF L  NPKVIYHKQTA+YFTP + C +VSFPSQ+GY SRK SLSK++RYLPAA
Sbjct: 1   MQIAATNFFLTTNPKVIYHKQTADYFTPKVTCINVSFPSQMGYGSRKFSLSKNNRYLPAA 60

Query: 61  CAVLS-DVSVSSFQFEDFSVTNATNIDDSRELKIRVEVFGTKTRAIFNNIFDEMVAEAQP 120
           CAVLS DVSVSS QFEDFSVTNATN  +++ELKIRVEV G KTRAIFNN+FD+MVAEAQP
Sbjct: 61  CAVLSEDVSVSSSQFEDFSVTNATNTTENKELKIRVEVSGAKTRAIFNNVFDKMVAEAQP 120

Query: 121 IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKKVINSTVAAYVEKEALKVGKNLRIE 180
           IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVI++VINSTVAAYVEKEALKVGK+LRIE
Sbjct: 121 IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIEEVINSTVAAYVEKEALKVGKDLRIE 180

Query: 181 QSYEDLEDQFEPDEKFFFDAIIQLKETN 208
           QSYEDLEDQFEPDEKFFFDAIIQLKE+N
Sbjct: 181 QSYEDLEDQFEPDEKFFFDAIIQLKESN 208

[Close]
BLAST of Tan0022836 vs. NCBI nr
Match: XP_022155450.1 (uncharacterized protein LOC111022592 isoform X3 [Momordica charantia])

HSP 1 Score: 341.3 bits (874), Expect = 5.9e-90
Identity = 180/208 (86.54%), Postives = 192/208 (92.31%), Query Frame = 0 

Query: 1   MEITATNFSLRANPKVIYHKQTANYFTPSLACKSVSFPSQVGYCSRKISLSKSDRYLPAA 60
           MEI ATNF L ANPKVIYHKQTA+ FTPSL C SVSFPSQ+ Y SRKISLS+S+R+LPAA
Sbjct: 1   MEIAATNFFLSANPKVIYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAA 60

Query: 61  CAVLSDVSVSSFQFEDFSVTNATNIDDSRELKIRVEVFGTKTRAIFNNIFDEMVAEAQPI 120
           CAVLSDVSVSS QFEDFSVT+A N  ++RELKIRVEV GTKTRAIFNN+FDEMVAEAQPI
Sbjct: 61  CAVLSDVSVSSSQFEDFSVTSALN--ENRELKIRVEVSGTKTRAIFNNVFDEMVAEAQPI 120

Query: 121 PGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKKVINSTVAAYVEK-EALKVGKNLRIE 180
           PGFRRVKGGKTPNIPRDILLEILGPS+VYKQVIKKVINSTVAAYVEK EALKVGK+LRIE
Sbjct: 121 PGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIE 180

Query: 181 QSYEDLEDQFEPDEKFFFDAIIQLKETN 208
           QSYEDLEDQFEPDE FFFDAIIQL +TN
Sbjct: 181 QSYEDLEDQFEPDENFFFDAIIQLNKTN 206

[Close]
BLAST of Tan0022836 vs. NCBI nr
Match: XP_022155449.1 (uncharacterized protein LOC111022592 isoform X2 [Momordica charantia])

HSP 1 Score: 341.3 bits (874), Expect = 5.9e-90
Identity = 180/208 (86.54%), Postives = 192/208 (92.31%), Query Frame = 0 

Query: 1   MEITATNFSLRANPKVIYHKQTANYFTPSLACKSVSFPSQVGYCSRKISLSKSDRYLPAA 60
           MEI ATNF L ANPKVIYHKQTA+ FTPSL C SVSFPSQ+ Y SRKISLS+S+R+LPAA
Sbjct: 1   MEIAATNFFLSANPKVIYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAA 60

Query: 61  CAVLS-DVSVSSFQFEDFSVTNATNIDDSRELKIRVEVFGTKTRAIFNNIFDEMVAEAQP 120
           CAVLS DVSVSS QFEDFSVT+A N  ++RELKIRVEV GTKTRAIFNN+FDEMVAEAQP
Sbjct: 61  CAVLSEDVSVSSSQFEDFSVTSALN--ENRELKIRVEVSGTKTRAIFNNVFDEMVAEAQP 120

Query: 121 IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKKVINSTVAAYVEKEALKVGKNLRIE 180
           IPGFRRVKGGKTPNIPRDILLEILGPS+VYKQVIKKVINSTVAAYVEKEALKVGK+LRIE
Sbjct: 121 IPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKEALKVGKDLRIE 180

Query: 181 QSYEDLEDQFEPDEKFFFDAIIQLKETN 208
           QSYEDLEDQFEPDE FFFDAIIQL +TN
Sbjct: 181 QSYEDLEDQFEPDENFFFDAIIQLNKTN 206

[Close]
BLAST of Tan0022836 vs. NCBI nr
Match: XP_038876223.1 (trigger factor isoform X1 [Benincasa hispida])

HSP 1 Score: 340.5 bits (872), Expect = 1.0e-89
Identity = 177/209 (84.69%), Postives = 193/209 (92.34%), Query Frame = 0 

Query: 1   MEITATNFSLRANPKVIYHKQTANYFTPSLACKSVSFPSQVGYCSRKISLSKSDRYLPAA 60
           M+I ATNF L  NPKVIYHKQTA+YFTP + C +VSFPSQ+GY SRK SLSK++RYLPAA
Sbjct: 1   MQIAATNFFLTTNPKVIYHKQTADYFTPKVTCINVSFPSQMGYGSRKFSLSKNNRYLPAA 60

Query: 61  CAVLS-DVSVSSFQFEDFSVTNATNIDDSRELKIRVEVFGTKTRAIFNNIFDEMVAEAQP 120
           CAVLS DVSVSS QFEDFSVTNATN  +++ELKIRVEV G KTRAIFNN+FD+MVAEAQP
Sbjct: 61  CAVLSEDVSVSSSQFEDFSVTNATNTTENKELKIRVEVSGAKTRAIFNNVFDKMVAEAQP 120

Query: 121 IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKKVINSTVAAYVEK-EALKVGKNLRI 180
           IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVI++VINSTVAAYVEK EALKVGK+LRI
Sbjct: 121 IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIEEVINSTVAAYVEKQEALKVGKDLRI 180

Query: 181 EQSYEDLEDQFEPDEKFFFDAIIQLKETN 208
           EQSYEDLEDQFEPDEKFFFDAIIQLKE+N
Sbjct: 181 EQSYEDLEDQFEPDEKFFFDAIIQLKESN 209

[Close]
BLAST of Tan0022836 vs. NCBI nr
Match: XP_022155448.1 (uncharacterized protein LOC111022592 isoform X1 [Momordica charantia])

HSP 1 Score: 336.7 bits (862), Expect = 1.5e-88
Identity = 180/209 (86.12%), Postives = 192/209 (91.87%), Query Frame = 0 

Query: 1   MEITATNFSLRANPKVIYHKQTANYFTPSLACKSVSFPSQVGYCSRKISLSKSDRYLPAA 60
           MEI ATNF L ANPKVIYHKQTA+ FTPSL C SVSFPSQ+ Y SRKISLS+S+R+LPAA
Sbjct: 1   MEIAATNFFLSANPKVIYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAA 60

Query: 61  CAVLS-DVSVSSFQFEDFSVTNATNIDDSRELKIRVEVFGTKTRAIFNNIFDEMVAEAQP 120
           CAVLS DVSVSS QFEDFSVT+A N  ++RELKIRVEV GTKTRAIFNN+FDEMVAEAQP
Sbjct: 61  CAVLSEDVSVSSSQFEDFSVTSALN--ENRELKIRVEVSGTKTRAIFNNVFDEMVAEAQP 120

Query: 121 IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKKVINSTVAAYVEK-EALKVGKNLRI 180
           IPGFRRVKGGKTPNIPRDILLEILGPS+VYKQVIKKVINSTVAAYVEK EALKVGK+LRI
Sbjct: 121 IPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRI 180

Query: 181 EQSYEDLEDQFEPDEKFFFDAIIQLKETN 208
           EQSYEDLEDQFEPDE FFFDAIIQL +TN
Sbjct: 181 EQSYEDLEDQFEPDENFFFDAIIQLNKTN 207

[Close]
BLAST of Tan0022836 vs. ExPASy TrEMBL
Match: A0A6J1DMG6 (uncharacterized protein LOC111022592 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111022592 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.9e-90
Identity = 180/208 (86.54%), Postives = 192/208 (92.31%), Query Frame = 0 

Query: 1   MEITATNFSLRANPKVIYHKQTANYFTPSLACKSVSFPSQVGYCSRKISLSKSDRYLPAA 60
           MEI ATNF L ANPKVIYHKQTA+ FTPSL C SVSFPSQ+ Y SRKISLS+S+R+LPAA
Sbjct: 1   MEIAATNFFLSANPKVIYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAA 60

Query: 61  CAVLSDVSVSSFQFEDFSVTNATNIDDSRELKIRVEVFGTKTRAIFNNIFDEMVAEAQPI 120
           CAVLSDVSVSS QFEDFSVT+A N  ++RELKIRVEV GTKTRAIFNN+FDEMVAEAQPI
Sbjct: 61  CAVLSDVSVSSSQFEDFSVTSALN--ENRELKIRVEVSGTKTRAIFNNVFDEMVAEAQPI 120

Query: 121 PGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKKVINSTVAAYVEK-EALKVGKNLRIE 180
           PGFRRVKGGKTPNIPRDILLEILGPS+VYKQVIKKVINSTVAAYVEK EALKVGK+LRIE
Sbjct: 121 PGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIE 180

Query: 181 QSYEDLEDQFEPDEKFFFDAIIQLKETN 208
           QSYEDLEDQFEPDE FFFDAIIQL +TN
Sbjct: 181 QSYEDLEDQFEPDENFFFDAIIQLNKTN 206

[Close]
BLAST of Tan0022836 vs. ExPASy TrEMBL
Match: A0A6J1DQB1 (uncharacterized protein LOC111022592 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022592 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.9e-90
Identity = 180/208 (86.54%), Postives = 192/208 (92.31%), Query Frame = 0 

Query: 1   MEITATNFSLRANPKVIYHKQTANYFTPSLACKSVSFPSQVGYCSRKISLSKSDRYLPAA 60
           MEI ATNF L ANPKVIYHKQTA+ FTPSL C SVSFPSQ+ Y SRKISLS+S+R+LPAA
Sbjct: 1   MEIAATNFFLSANPKVIYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAA 60

Query: 61  CAVLS-DVSVSSFQFEDFSVTNATNIDDSRELKIRVEVFGTKTRAIFNNIFDEMVAEAQP 120
           CAVLS DVSVSS QFEDFSVT+A N  ++RELKIRVEV GTKTRAIFNN+FDEMVAEAQP
Sbjct: 61  CAVLSEDVSVSSSQFEDFSVTSALN--ENRELKIRVEVSGTKTRAIFNNVFDEMVAEAQP 120

Query: 121 IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKKVINSTVAAYVEKEALKVGKNLRIE 180
           IPGFRRVKGGKTPNIPRDILLEILGPS+VYKQVIKKVINSTVAAYVEKEALKVGK+LRIE
Sbjct: 121 IPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKEALKVGKDLRIE 180

Query: 181 QSYEDLEDQFEPDEKFFFDAIIQLKETN 208
           QSYEDLEDQFEPDE FFFDAIIQL +TN
Sbjct: 181 QSYEDLEDQFEPDENFFFDAIIQLNKTN 206

[Close]
BLAST of Tan0022836 vs. ExPASy TrEMBL
Match: A0A6J1DMZ5 (uncharacterized protein LOC111022592 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022592 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 7.1e-89
Identity = 180/209 (86.12%), Postives = 192/209 (91.87%), Query Frame = 0 

Query: 1   MEITATNFSLRANPKVIYHKQTANYFTPSLACKSVSFPSQVGYCSRKISLSKSDRYLPAA 60
           MEI ATNF L ANPKVIYHKQTA+ FTPSL C SVSFPSQ+ Y SRKISLS+S+R+LPAA
Sbjct: 1   MEIAATNFFLSANPKVIYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAA 60

Query: 61  CAVLS-DVSVSSFQFEDFSVTNATNIDDSRELKIRVEVFGTKTRAIFNNIFDEMVAEAQP 120
           CAVLS DVSVSS QFEDFSVT+A N  ++RELKIRVEV GTKTRAIFNN+FDEMVAEAQP
Sbjct: 61  CAVLSEDVSVSSSQFEDFSVTSALN--ENRELKIRVEVSGTKTRAIFNNVFDEMVAEAQP 120

Query: 121 IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKKVINSTVAAYVEK-EALKVGKNLRI 180
           IPGFRRVKGGKTPNIPRDILLEILGPS+VYKQVIKKVINSTVAAYVEK EALKVGK+LRI
Sbjct: 121 IPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRI 180

Query: 181 EQSYEDLEDQFEPDEKFFFDAIIQLKETN 208
           EQSYEDLEDQFEPDE FFFDAIIQL +TN
Sbjct: 181 EQSYEDLEDQFEPDENFFFDAIIQLNKTN 207

[Close]
BLAST of Tan0022836 vs. ExPASy TrEMBL
Match: A0A6J1DN00 (uncharacterized protein LOC111022592 isoform X5 OS=Momordica charantia OX=3673 GN=LOC111022592 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.6e-88
Identity = 179/208 (86.06%), Postives = 191/208 (91.83%), Query Frame = 0 

Query: 1   MEITATNFSLRANPKVIYHKQTANYFTPSLACKSVSFPSQVGYCSRKISLSKSDRYLPAA 60
           MEI ATNF L ANPKVIYHKQTA+ FTPSL C SVSFPSQ+ Y SRKISL +S+R+LPAA
Sbjct: 1   MEIAATNFFLSANPKVIYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISL-RSNRFLPAA 60

Query: 61  CAVLSDVSVSSFQFEDFSVTNATNIDDSRELKIRVEVFGTKTRAIFNNIFDEMVAEAQPI 120
           CAVLSDVSVSS QFEDFSVT+A N  ++RELKIRVEV GTKTRAIFNN+FDEMVAEAQPI
Sbjct: 61  CAVLSDVSVSSSQFEDFSVTSALN--ENRELKIRVEVSGTKTRAIFNNVFDEMVAEAQPI 120

Query: 121 PGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKKVINSTVAAYVEK-EALKVGKNLRIE 180
           PGFRRVKGGKTPNIPRDILLEILGPS+VYKQVIKKVINSTVAAYVEK EALKVGK+LRIE
Sbjct: 121 PGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIE 180

Query: 181 QSYEDLEDQFEPDEKFFFDAIIQLKETN 208
           QSYEDLEDQFEPDE FFFDAIIQL +TN
Sbjct: 181 QSYEDLEDQFEPDENFFFDAIIQLNKTN 205

[Close]
BLAST of Tan0022836 vs. ExPASy TrEMBL
Match: A0A1S3CB34 (trigger factor-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103498958 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.6e-88
Identity = 172/208 (82.69%), Postives = 188/208 (90.38%), Query Frame = 0 

Query: 1   MEITATNFSLRANPKVIYHKQTANYFTPSLACKSVSFPSQVGYCSRKISLSKSDRYLPAA 60
           M+I A NF L ANPK +YHKQT +YFTP+L C SVSFPSQ+ Y S KISLSK++RYLPAA
Sbjct: 1   MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA 60

Query: 61  CAVLSD-VSVSSFQFEDFSVTNATNIDDSRELKIRVEVFGTKTRAIFNNIFDEMVAEAQP 120
           CAVLS+  SVSS QFEDFSVTN TN  +++ELKIRVEV GTKTRAIFN +FD MVAEAQP
Sbjct: 61  CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP 120

Query: 121 IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKKVINSTVAAYVEKEALKVGKNLRIE 180
           IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIK+VINSTVAAYVEKEALKVGK+LRI+
Sbjct: 121 IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRID 180

Query: 181 QSYEDLEDQFEPDEKFFFDAIIQLKETN 208
           QSYEDLEDQFEPDEKFFFDAIIQLKE+N
Sbjct: 181 QSYEDLEDQFEPDEKFFFDAIIQLKESN 208

[Close]
BLAST of Tan0022836 vs. TAIR 10
Match: AT2G30695.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 253 Blast hits to 253 proteins in 72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). )

HSP 1 Score: 175.3 bits (443), Expect = 5.3e-44
Identity = 93/163 (57.06%), Postives = 119/163 (73.01%), Query Frame = 0 

Query: 46  RKISLSKSDRYLPAACAVLSDVSVSSFQFEDFSV-TNATNIDDSRELKIRVEVFGTKTRA 105
           +K+    ++R   A CA  SDV  SS   +D SV       + S E+K+ V+V G KT+ 
Sbjct: 40  QKLCTRATNRQFVAVCAAPSDVETSS---KDESVLITKVETETSNEVKVHVQVSGEKTQT 99

Query: 106 IFNNIFDEMVAEAQPIPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKKVINSTVAAY 165
           +FN++F++MVA AQPIPGFRRVKGGKTPNIP+D+LLEILG SKVYKQVIKK+INS +  Y
Sbjct: 100 VFNHVFEKMVAAAQPIPGFRRVKGGKTPNIPKDVLLEILGYSKVYKQVIKKLINSAIEDY 159

Query: 166 VEKEALKVGKNLRIEQSYEDLEDQFEPDEKFFFDAIIQLKETN 208
           V++E LKVGK L + QSYEDLE+ FEP E F FDA I+L+E +
Sbjct: 160 VKQEDLKVGKELTVVQSYEDLEETFEPGESFSFDATIKLQEAS 199

[Close]
BLAST of Tan0022836 vs. TAIR 10
Match: AT2G30695.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 175.3 bits (443), Expect = 5.3e-44
Identity = 93/163 (57.06%), Postives = 119/163 (73.01%), Query Frame = 0 

Query: 46  RKISLSKSDRYLPAACAVLSDVSVSSFQFEDFSV-TNATNIDDSRELKIRVEVFGTKTRA 105
           +K+    ++R   A CA  SDV  SS   +D SV       + S E+K+ V+V G KT+ 
Sbjct: 40  QKLCTRATNRQFVAVCAAPSDVETSS---KDESVLITKVETETSNEVKVHVQVSGEKTQT 99

Query: 106 IFNNIFDEMVAEAQPIPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKKVINSTVAAY 165
           +FN++F++MVA AQPIPGFRRVKGGKTPNIP+D+LLEILG SKVYKQVIKK+INS +  Y
Sbjct: 100 VFNHVFEKMVAAAQPIPGFRRVKGGKTPNIPKDVLLEILGYSKVYKQVIKKLINSAIEDY 159

Query: 166 VEKEALKVGKNLRIEQSYEDLEDQFEPDEKFFFDAIIQLKETN 208
           V++E LKVGK L + QSYEDLE+ FEP E F FDA I+L+E +
Sbjct: 160 VKQEDLKVGKELTVVQSYEDLEETFEPGESFSFDATIKLQEAS 199

The following BLAST results are available for this feature:
BLAST of Tan0022836 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B1XL189.4e-0623.93Trigger factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=320... [more]
BLAST of Tan0022836 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038876224.14.1e-9185.10trigger factor isoform X2 [Benincasa hispida][more]
XP_022155450.15.9e-9086.54uncharacterized protein LOC111022592 isoform X3 [Momordica charantia][more]
XP_022155449.15.9e-9086.54uncharacterized protein LOC111022592 isoform X2 [Momordica charantia][more]
XP_038876223.11.0e-8984.69trigger factor isoform X1 [Benincasa hispida][more]
XP_022155448.11.5e-8886.12uncharacterized protein LOC111022592 isoform X1 [Momordica charantia][more]
BLAST of Tan0022836 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DMG62.9e-9086.54uncharacterized protein LOC111022592 isoform X3 OS=Momordica charantia OX=3673 G... [more]
A0A6J1DQB12.9e-9086.54uncharacterized protein LOC111022592 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1DMZ57.1e-8986.12uncharacterized protein LOC111022592 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1DN001.6e-8886.06uncharacterized protein LOC111022592 isoform X5 OS=Momordica charantia OX=3673 G... [more]
A0A1S3CB341.6e-8882.69trigger factor-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103498958 PE=4 SV=1[more]
BLAST of Tan0022836 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G30695.15.3e-4457.06FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein ... [more]
AT2G30695.25.3e-4457.06FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein ... [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036611Trigger factor ribosome-binding domain superfamilyGENE3D3.30.70.1050coord: 83..204
e-value: 7.3E-15
score: 57.2
IPR036611Trigger factor ribosome-binding domain superfamilySUPERFAMILY102735Trigger factor ribosome-binding domaincoord: 88..202
IPR008881Trigger factor, ribosome-binding, bacterialPFAMPF05697Trigger_Ncoord: 84..201
e-value: 8.3E-8
score: 32.6
NoneNo IPR availablePANTHERPTHR30560:SF5OS09G0515400 PROTEINcoord: 1..206
IPR005215Trigger factorPANTHERPTHR30560TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASEcoord: 1..206

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0022836.1Tan0022836.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0061077 chaperone-mediated protein folding
biological_process GO:0051083 'de novo' cotranslational protein folding
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0015031 protein transport
biological_process GO:0043335 protein unfolding
biological_process GO:0006457 protein folding
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
molecular_function GO:0044183 protein folding chaperone
molecular_function GO:0043022 ribosome binding