Tan0022771 (gene) Snake gourd v1

Overview
NameTan0022771
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionATP-binding/protein serine/threonine kinase
LocationLG01: 80029216 .. 80029562 (+)
RNA-Seq ExpressionTan0022771
SyntenyTan0022771
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAATCCTCAACTAAGTTAGCTTGTTTGCTTCTGGTGTTCTTCATTGCATCTGGTATATATAAAAATCATTTTAATTTTTCATATCCTATATATTTTCTCTCGCCCATTTTTATAAGTTTATTTGAATGACAATTATATGTGTAAATGTTTCAGGATCAGTGTTCATGGCAGAGGCAAGAAACGTAGTCAACATTCCATGCAATATTCCTAATGATTGTGATCCCAATCCATTTAAGTGTGATTGTCGAATGAACCTATGTTTTTGCCACCCAGAATCTGAAATGAAATTGTTCGACAAAATCTTCCCTGAATATTTGAAAGAACAAAAGACAATTCCCTGA

mRNA sequence

ATGGAGAAATCCTCAACTAAGTTAGCTTGTTTGCTTCTGGTGTTCTTCATTGCATCTGGATCAGTGTTCATGGCAGAGGCAAGAAACGTAGTCAACATTCCATGCAATATTCCTAATGATTGTGATCCCAATCCATTTAAGTGTGATTGTCGAATGAACCTATGTTTTTGCCACCCAGAATCTGAAATGAAATTGTTCGACAAAATCTTCCCTGAATATTTGAAAGAACAAAAGACAATTCCCTGA

Coding sequence (CDS)

ATGGAGAAATCCTCAACTAAGTTAGCTTGTTTGCTTCTGGTGTTCTTCATTGCATCTGGATCAGTGTTCATGGCAGAGGCAAGAAACGTAGTCAACATTCCATGCAATATTCCTAATGATTGTGATCCCAATCCATTTAAGTGTGATTGTCGAATGAACCTATGTTTTTGCCACCCAGAATCTGAAATGAAATTGTTCGACAAAATCTTCCCTGAATATTTGAAAGAACAAAAGACAATTCCCTGA

Protein sequence

MEKSSTKLACLLLVFFIASGSVFMAEARNVVNIPCNIPNDCDPNPFKCDCRMNLCFCHPESEMKLFDKIFPEYLKEQKTIP
Homology
BLAST of Tan0022771 vs. NCBI nr
Match: KAE8651915.1 (hypothetical protein Csa_006059 [Cucumis sativus])

HSP 1 Score: 95.1 bits (235), Expect = 2.9e-16
Identity = 49/80 (61.25%), Postives = 59/80 (73.75%), Query Frame = 0

Query: 1  MEKSSTKLACLLLVFFIASGSVFMAEARNVVNIPCNIPNDCDPNPFKCDCRMNLCFCHPE 60
          M KSSTKLA LLL+FFI S  +F+A ARNVVNIPCN   DC  +P+ CDC++NLCFCHP 
Sbjct: 1  MVKSSTKLALLLLMFFIIS-EMFVANARNVVNIPCNSRIDCS-DPWDCDCKLNLCFCHPH 60

Query: 61 S-EMKLFDKIFPEYLKEQKT 80
            E K     FPE+L+E+KT
Sbjct: 61 GLEKKFLHNAFPEHLREEKT 78

BLAST of Tan0022771 vs. NCBI nr
Match: KGN61957.1 (hypothetical protein Csa_006779 [Cucumis sativus])

HSP 1 Score: 81.3 bits (199), Expect = 4.3e-12
Identity = 40/79 (50.63%), Postives = 51/79 (64.56%), Query Frame = 0

Query: 1  MEKSSTKLACLLLVFFIASGSVFMAEARNVVNIPCNIPNDCDPNPFKCDCRMNLCFCHPE 60
          M K  TK A   L+ FI S  +F+++ARNVVNIPC    DC  +P+ CDC++NLCFCHP 
Sbjct: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCS-DPWDCDCKLNLCFCHPH 60

Query: 61 S-EMKLFDKIFPEYLKEQK 79
            E K   K FPE L+E +
Sbjct: 61 GLEKKFLHKAFPESLREDR 78

BLAST of Tan0022771 vs. NCBI nr
Match: EOY32073.1 (Uncharacterized protein TCM_039538 [Theobroma cacao])

HSP 1 Score: 60.5 bits (145), Expect = 7.9e-06
Identity = 31/59 (52.54%), Postives = 36/59 (61.02%), Query Frame = 0

Query: 1  MEKSSTKLACLLLVFFIASGSVFMAEARNVVNIPCNIPNDCDPNPFKCDCRMNLCFCHP 60
          M+K S KL  L  +   A G     EARN +N PCN   DC  +P KC+CRMNLCFCHP
Sbjct: 1  MDKFSFKLIFLATLLVFALGLQVGVEARN-INTPCNTVKDC-ADPIKCECRMNLCFCHP 57

BLAST of Tan0022771 vs. NCBI nr
Match: EOY32074.1 (Uncharacterized protein TCM_039540 [Theobroma cacao])

HSP 1 Score: 60.1 bits (144), Expect = 1.0e-05
Identity = 31/59 (52.54%), Postives = 36/59 (61.02%), Query Frame = 0

Query: 1  MEKSSTKLACLLLVFFIASGSVFMAEARNVVNIPCNIPNDCDPNPFKCDCRMNLCFCHP 60
          MEK S KL  L  +   A G     EARN +N PCN   DC  +P KC+CR+NLCFCHP
Sbjct: 1  MEKFSFKLIFLAALLVFALGLQVGVEARN-INTPCNTVKDC-ADPIKCECRINLCFCHP 57

BLAST of Tan0022771 vs. NCBI nr
Match: OMO57769.1 (ATP-binding/protein serine/threonine kinase [Corchorus olitorius])

HSP 1 Score: 59.7 bits (143), Expect = 1.4e-05
Identity = 31/52 (59.62%), Postives = 37/52 (71.15%), Query Frame = 0

Query: 8  LACLLLVFFIASGSVFMAEARNVVNIPCNIPNDCDPNPFKCDCRMNLCFCHP 60
          LA LL+ F   +GS    EARN +NIPCN   DC P+P KC+CR+NLCFCHP
Sbjct: 12 LAALLINF---AGSQVGVEARN-INIPCNTIKDC-PDPVKCECRINLCFCHP 58

BLAST of Tan0022771 vs. ExPASy TrEMBL
Match: A0A0A0LJR0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285280 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.1e-16
Identity = 49/80 (61.25%), Postives = 59/80 (73.75%), Query Frame = 0

Query: 1  MEKSSTKLACLLLVFFIASGSVFMAEARNVVNIPCNIPNDCDPNPFKCDCRMNLCFCHPE 60
          M KSSTKLA LLL+FFI S   F+A+ARNVVNIPCN   DC  +P+ CDC++NLCFCHP 
Sbjct: 1  MVKSSTKLALLLLMFFIIS-ETFVADARNVVNIPCNSRIDCS-DPWDCDCKLNLCFCHPH 60

Query: 61 S-EMKLFDKIFPEYLKEQKT 80
            E K     FPE+L+E+KT
Sbjct: 61 GLEKKFLHNAFPEHLREEKT 78

BLAST of Tan0022771 vs. ExPASy TrEMBL
Match: A0A0A0LMG3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G276990 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.1e-12
Identity = 40/79 (50.63%), Postives = 51/79 (64.56%), Query Frame = 0

Query: 1  MEKSSTKLACLLLVFFIASGSVFMAEARNVVNIPCNIPNDCDPNPFKCDCRMNLCFCHPE 60
          M K  TK A   L+ FI S  +F+++ARNVVNIPC    DC  +P+ CDC++NLCFCHP 
Sbjct: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCS-DPWDCDCKLNLCFCHPH 60

Query: 61 S-EMKLFDKIFPEYLKEQK 79
            E K   K FPE L+E +
Sbjct: 61 GLEKKFLHKAFPESLREDR 78

BLAST of Tan0022771 vs. ExPASy TrEMBL
Match: A0A2N9FRQ0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17804 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-06
Identity = 36/75 (48.00%), Postives = 43/75 (57.33%), Query Frame = 0

Query: 1  MEKSSTKLACLLLVFFIASGSVFMAEARNVVNIPCNIPNDCDPNPFKCDCRMNLCFCHPE 60
          MEKSS KLA ++++  IAS   F  +ARNVV IPC   NDC  +  KCDC  N C C P 
Sbjct: 1  MEKSSLKLALIVVLLLIASSFQFRVDARNVVVIPCETYNDCRDSA-KCDCVHNHCRC-PG 60

Query: 61 SEMKLFDKIFPEYLK 76
           E   F K    +LK
Sbjct: 61 EEQDFFTKAITNHLK 73

BLAST of Tan0022771 vs. ExPASy TrEMBL
Match: A0A061GRN9 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_039538 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.8e-06
Identity = 31/59 (52.54%), Postives = 36/59 (61.02%), Query Frame = 0

Query: 1  MEKSSTKLACLLLVFFIASGSVFMAEARNVVNIPCNIPNDCDPNPFKCDCRMNLCFCHP 60
          M+K S KL  L  +   A G     EARN +N PCN   DC  +P KC+CRMNLCFCHP
Sbjct: 1  MDKFSFKLIFLATLLVFALGLQVGVEARN-INTPCNTVKDC-ADPIKCECRMNLCFCHP 57

BLAST of Tan0022771 vs. ExPASy TrEMBL
Match: A0A061GY75 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_039540 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 5.0e-06
Identity = 31/59 (52.54%), Postives = 36/59 (61.02%), Query Frame = 0

Query: 1  MEKSSTKLACLLLVFFIASGSVFMAEARNVVNIPCNIPNDCDPNPFKCDCRMNLCFCHP 60
          MEK S KL  L  +   A G     EARN +N PCN   DC  +P KC+CR+NLCFCHP
Sbjct: 1  MEKFSFKLIFLAALLVFALGLQVGVEARN-INTPCNTVKDC-ADPIKCECRINLCFCHP 57

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAE8651915.12.9e-1661.25hypothetical protein Csa_006059 [Cucumis sativus][more]
KGN61957.14.3e-1250.63hypothetical protein Csa_006779 [Cucumis sativus][more]
EOY32073.17.9e-0652.54Uncharacterized protein TCM_039538 [Theobroma cacao][more]
EOY32074.11.0e-0552.54Uncharacterized protein TCM_039540 [Theobroma cacao][more]
OMO57769.11.4e-0559.62ATP-binding/protein serine/threonine kinase [Corchorus olitorius][more]
Match NameE-valueIdentityDescription
A0A0A0LJR01.1e-1661.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285280 PE=4 SV=1[more]
A0A0A0LMG32.1e-1250.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G276990 PE=4 SV=1[more]
A0A2N9FRQ01.0e-0648.00Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17804 PE=4 SV=1[more]
A0A061GRN93.8e-0652.54Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_039538 PE=4 SV=1[more]
A0A061GY755.0e-0652.54Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_039540 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0022771.1Tan0022771.1mRNA