Tan0022708 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCTCCTTTTGTATTTTTAGTAAATGGGAGTCCGAATGCAAGAGGGGGAGTATTAGTATAGTATACTCACTGTTTAATAAATATTTTTCCTTCTGGGGAAATTTATTTCAATAATGGCGAAAGGCCGGAAATTGACGACAAGTCGGAGCGAGCGATTTCTCGGTAGCTACTACAGTCATAGCCATGATTCCACCGGGACTGACTCGTCAGAACTGGGCGAAGAGGATGTTTGGCCGATGACGGATAGCGTTGAGACGGACCGGGAGGAGGATTTCGGCGAAGAGAGTTCGCCGGCCGGTGGCGGCGGCAGCGATGACGGGAGTAATAGTCATCGTCACGGAGGGATTTCAGTGAGGAGTGGGAGTGGGGTTCCTCGGGATACACGTGAGCGACACGTAGGCGGGTTGTCGTTGGCATTTGAAGATCCGGGGAGGATGACGTCGGCGAGGATCGTGCACCAGTTTCGGGGGAACGACAGCGTGGCGTCTCCACGAGGGCGGCAGATGGCTACGTCAGCGCCCGTGAACGTGCCGGATTGGAGCAAGATTCTCCGAGTGGACTCGGTGGACTCGCTACACGAGTTGGACGAGTCGTTGGATGACCGGGACTCGGAGATCGTTCCGCCGCATGAGTACTTGGCCAGAAGCAGAAAGATGAACGCCACTTCCGTTTTCGTCGGTGTCGGCCGGACCCTCAAGGGCCGGGACATGAGACGGGTCCGAGATGCGGTATGGAGCCAGACCGGGTTCGATGGATAAAATTTTCAAATTTTAAAATTAAAAATCGCTGTTAGGAGATCAAGATCAACCAAGAATTAATTAAATATTGTGAAGAGGGGACGAATTCTTTTTGTTGTTTTTTTTTTCATGGGTTGCAGTTGACCCGGATTAATCGGGTAAACCCGGTGGCAACTCATCATCCCAGATTCCCAAGTATGGTTGAAGAAAATTTTCTCAGATTGAAGTAATTCCGGACCGGTGACCGGAACGGGATTTGAAAATCAACCCATCTCTTTTGACTCTGTTTGCAGTCAGTCTTCTAATCTGGTAGTCTCGTTGCGGCTTTTCAGTATACGCATAATCTCTCCTCTCCTCAATTGAAATTTGGCAACGACTGTATACAAATTGGGATTTTTTTAAAAAATATAATTATGTTAGTTGTGGTTTTAAGAAATAGCAAAATGGGACTTGTTTGTAAAGAAACAAGATAAAAAGTTGCGATTGCAAGTTGATGGAAAGCAATGAAACAGTAGAGAGAGACTGGAGGACATGCATCATGCAGTAAAGTTTAAGAGCAGTGCTTGGAATCGAGTTTGATGGGAAAGAGAGCGTTTTGACTGGAGG GCTCCTTTTGTATTTTTAGTAAATGGGAGTCCGAATGCAAGAGGGGGAGTATTAGTATAGTATACTCACTGTTTAATAAATATTTTTCCTTCTGGGGAAATTTATTTCAATAATGGCGAAAGGCCGGAAATTGACGACAAGTCGGAGCGAGCGATTTCTCGGTAGCTACTACAGTCATAGCCATGATTCCACCGGGACTGACTCGTCAGAACTGGGCGAAGAGGATGTTTGGCCGATGACGGATAGCGTTGAGACGGACCGGGAGGAGGATTTCGGCGAAGAGAGTTCGCCGGCCGGTGGCGGCGGCAGCGATGACGGGAGTAATAGTCATCGTCACGGAGGGATTTCAGTGAGGAGTGGGAGTGGGGTTCCTCGGGATACACGTGAGCGACACGTAGGCGGGTTGTCGTTGGCATTTGAAGATCCGGGGAGGATGACGTCGGCGAGGATCGTGCACCAGTTTCGGGGGAACGACAGCGTGGCGTCTCCACGAGGGCGGCAGATGGCTACGTCAGCGCCCGTGAACGTGCCGGATTGGAGCAAGATTCTCCGAGTGGACTCGGTGGACTCGCTACACGAGTTGGACGAGTCGTTGGATGACCGGGACTCGGAGATCGTTCCGCCGCATGAGTACTTGGCCAGAAGCAGAAAGATGAACGCCACTTCCGTTTTCGTCGGTGTCGGCCGGACCCTCAAGGGCCGGGACATGAGACGGGTCCGAGATGCGGTATGGAGCCAGACCGGGTTCGATGGATAAAATTTTCAAATTTTAAAATTAAAAATCGCTGTTAGGAGATCAAGATCAACCAAGAATTAATTAAATATTGTGAAGAGGGGACGAATTCTTTTTGTTGTTTTTTTTTTCATGGGTTGCAGTTGACCCGGATTAATCGGGTAAACCCGGTGGCAACTCATCATCCCAGATTCCCAAGTATGGTTGAAGAAAATTTTCTCAGATTGAAGTAATTCCGGACCGGTGACCGGAACGGGATTTGAAAATCAACCCATCTCTTTTGACTCTGTTTGCAGTCAGTCTTCTAATCTGGTAGTCTCGTTGCGGCTTTTCAGTATACGCATAATCTCTCCTCTCCTCAATTGAAATTTGGCAACGACTGTATACAAATTGGGATTTTTTTAAAAAATATAATTATGTTAGTTGTGGTTTTAAGAAATAGCAAAATGGGACTTGTTTGTAAAGAAACAAGATAAAAAGTTGCGATTGCAAGTTGATGGAAAGCAATGAAACAGTAGAGAGAGACTGGAGGACATGCATCATGCAGTAAAGTTTAAGAGCAGTGCTTGGAATCGAGTTTGATGGGAAAGAGAGCGTTTTGACTGGAGG ATGGCGAAAGGCCGGAAATTGACGACAAGTCGGAGCGAGCGATTTCTCGGTAGCTACTACAGTCATAGCCATGATTCCACCGGGACTGACTCGTCAGAACTGGGCGAAGAGGATGTTTGGCCGATGACGGATAGCGTTGAGACGGACCGGGAGGAGGATTTCGGCGAAGAGAGTTCGCCGGCCGGTGGCGGCGGCAGCGATGACGGGAGTAATAGTCATCGTCACGGAGGGATTTCAGTGAGGAGTGGGAGTGGGGTTCCTCGGGATACACGTGAGCGACACGTAGGCGGGTTGTCGTTGGCATTTGAAGATCCGGGGAGGATGACGTCGGCGAGGATCGTGCACCAGTTTCGGGGGAACGACAGCGTGGCGTCTCCACGAGGGCGGCAGATGGCTACGTCAGCGCCCGTGAACGTGCCGGATTGGAGCAAGATTCTCCGAGTGGACTCGGTGGACTCGCTACACGAGTTGGACGAGTCGTTGGATGACCGGGACTCGGAGATCGTTCCGCCGCATGAGTACTTGGCCAGAAGCAGAAAGATGAACGCCACTTCCGTTTTCGTCGGTGTCGGCCGGACCCTCAAGGGCCGGGACATGAGACGGGTCCGAGATGCGGTATGGAGCCAGACCGGGTTCGATGGATAA MAKGRKLTTSRSERFLGSYYSHSHDSTGTDSSELGEEDVWPMTDSVETDREEDFGEESSPAGGGGSDDGSNSHRHGGISVRSGSGVPRDTRERHVGGLSLAFEDPGRMTSARIVHQFRGNDSVASPRGRQMATSAPVNVPDWSKILRVDSVDSLHELDESLDDRDSEIVPPHEYLARSRKMNATSVFVGVGRTLKGRDMRRVRDAVWSQTGFDG Homology
BLAST of Tan0022708 vs. NCBI nr
Match: XP_022926760.1 (uncharacterized protein LOC111433787 [Cucurbita moschata]) HSP 1 Score: 377.9 bits (969), Expect = 5.9e-101 Identity = 194/215 (90.23%), Postives = 201/215 (93.49%), Query Frame = 0
BLAST of Tan0022708 vs. NCBI nr
Match: XP_023517517.1 (uncharacterized protein LOC111781256 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 377.9 bits (969), Expect = 5.9e-101 Identity = 194/215 (90.23%), Postives = 202/215 (93.95%), Query Frame = 0
BLAST of Tan0022708 vs. NCBI nr
Match: KAG6594660.1 (hypothetical protein SDJN03_11213, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026627.1 hypothetical protein SDJN02_10629, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 376.3 bits (965), Expect = 1.7e-100 Identity = 194/215 (90.23%), Postives = 201/215 (93.49%), Query Frame = 0
BLAST of Tan0022708 vs. NCBI nr
Match: XP_023002960.1 (uncharacterized protein LOC111496710 [Cucurbita maxima]) HSP 1 Score: 369.0 bits (946), Expect = 2.8e-98 Identity = 192/215 (89.30%), Postives = 201/215 (93.49%), Query Frame = 0
BLAST of Tan0022708 vs. NCBI nr
Match: XP_038882726.1 (uncharacterized protein LOC120073884 [Benincasa hispida]) HSP 1 Score: 346.3 bits (887), Expect = 1.9e-91 Identity = 185/215 (86.05%), Postives = 197/215 (91.63%), Query Frame = 0
BLAST of Tan0022708 vs. ExPASy TrEMBL
Match: A0A6J1EM13 (uncharacterized protein LOC111433787 OS=Cucurbita moschata OX=3662 GN=LOC111433787 PE=4 SV=1) HSP 1 Score: 377.9 bits (969), Expect = 2.9e-101 Identity = 194/215 (90.23%), Postives = 201/215 (93.49%), Query Frame = 0
BLAST of Tan0022708 vs. ExPASy TrEMBL
Match: A0A6J1KQF8 (uncharacterized protein LOC111496710 OS=Cucurbita maxima OX=3661 GN=LOC111496710 PE=4 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 1.3e-98 Identity = 192/215 (89.30%), Postives = 201/215 (93.49%), Query Frame = 0
BLAST of Tan0022708 vs. ExPASy TrEMBL
Match: A0A1S3AZM7 (uncharacterized protein LOC103484606 OS=Cucumis melo OX=3656 GN=LOC103484606 PE=4 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 3.3e-89 Identity = 182/215 (84.65%), Postives = 190/215 (88.37%), Query Frame = 0
BLAST of Tan0022708 vs. ExPASy TrEMBL
Match: A0A0A0KHD0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513790 PE=4 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 6.2e-88 Identity = 179/215 (83.26%), Postives = 188/215 (87.44%), Query Frame = 0
BLAST of Tan0022708 vs. ExPASy TrEMBL
Match: A0A5D3CNN0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006520 PE=4 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 8.1e-88 Identity = 180/215 (83.72%), Postives = 189/215 (87.91%), Query Frame = 0
BLAST of Tan0022708 vs. TAIR 10
Match: AT1G11700.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 165.6 bits (418), Expect = 4.3e-41 Identity = 110/228 (48.25%), Postives = 138/228 (60.53%), Query Frame = 0
BLAST of Tan0022708 vs. TAIR 10
Match: AT1G61930.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 158.7 bits (400), Expect = 5.3e-39 Identity = 111/227 (48.90%), Postives = 137/227 (60.35%), Query Frame = 0
BLAST of Tan0022708 vs. TAIR 10
Match: AT4G21930.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 122.1 bits (305), Expect = 5.5e-28 Identity = 101/227 (44.49%), Postives = 119/227 (52.42%), Query Frame = 0
BLAST of Tan0022708 vs. TAIR 10
Match: AT5G60680.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 80.9 bits (198), Expect = 1.4e-15 Identity = 45/87 (51.72%), Postives = 62/87 (71.26%), Query Frame = 0
BLAST of Tan0022708 vs. TAIR 10
Match: AT5G03230.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 78.2 bits (191), Expect = 9.0e-15 Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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