Tan0022593 (gene) Snake gourd v1

Overview
NameTan0022593
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionULP_PROTEASE domain-containing protein
LocationLG06: 67099771 .. 67100359 (-)
RNA-Seq ExpressionTan0022593
SyntenyTan0022593
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGATCGTTATCCATCCGCGGGCAAACACCGTTTATGTCTTAAACTCGTTGAGGAGTAAGATCGAAGAAAGTTTTCAAGGAACAATAAATACGTAAGTGTTTCAAACCTTTAGAATGAATTACTTTCTATTAATTTTTCTAATGTTTCAAACTCTTTAGATCCTTGAAAATGTGGCAAGCCAAGCACTCACTTCCACAATATCGTTCTTCCATCACTTGGAAACTTGTAAAGGTAAACATAATTTAATATATTCGAATGTTTTGTTCAACGTTGGAACAATATTTAACTCAAATATGCTATTTTTTAAATTATTTTGCATATAGTGCCCCCGTCAACCGAGTTCTGTGGAGTGCATGGGGTATTATGTATGTAAGATATATACGAGAAATCGTATATAATTCTAGTATTCCTATAATGAACCTCGTAAGTACTCTTATTTTATCTGGTTTGTGATTCAAAACATAATTTAGTCTAATGTTATTATATTATTTTTCTTTATAGTTCAACACAAAAACTGCATACAAACAAGAAGAAATCGACGAGGTTCGAGTAGAATGGGCGGATTTTGTTGGCAGATTTGTGTAA

mRNA sequence

ATGTTGATCGTTATCCATCCGCGGGCAAACACCGTTTATGTCTTAAACTCGTTGAGGAGTAAGATCGAAGAAAGTTTTCAAGGAACAATAAATACATCCTTGAAAATGTGGCAAGCCAAGCACTCACTTCCACAATATCGTTCTTCCATCACTTGGAAACTTGTAAAGTTCAACACAAAAACTGCATACAAACAAGAAGAAATCGACGAGGTTCGAGTAGAATGGGCGGATTTTGTTGGCAGATTTGTGTAA

Coding sequence (CDS)

ATGTTGATCGTTATCCATCCGCGGGCAAACACCGTTTATGTCTTAAACTCGTTGAGGAGTAAGATCGAAGAAAGTTTTCAAGGAACAATAAATACATCCTTGAAAATGTGGCAAGCCAAGCACTCACTTCCACAATATCGTTCTTCCATCACTTGGAAACTTGTAAAGTTCAACACAAAAACTGCATACAAACAAGAAGAAATCGACGAGGTTCGAGTAGAATGGGCGGATTTTGTTGGCAGATTTGTGTAA

Protein sequence

MLIVIHPRANTVYVLNSLRSKIEESFQGTINTSLKMWQAKHSLPQYRSSITWKLVKFNTKTAYKQEEIDEVRVEWADFVGRFV
Homology
[Close]
BLAST of Tan0022593 vs. NCBI nr
Match: XP_022136076.1 (uncharacterized protein LOC111007859 isoform X1 [Momordica charantia])

HSP 1 Score: 103.2 bits (256), Expect = 1.1e-18
Identity = 56/115 (48.70%), Postives = 69/115 (60.00%), Query Frame = 0 

Query: 1   MLIVIHPRANTVYVLNSLRSKIEESFQGTINTSLKMWQAKHSLPQYRSSITWKLVK---- 60
           MLI+I+ R N VYVL+SLR KI+E +Q  INTSLK+WQAKHS+ +YR++  WK +K    
Sbjct: 552 MLIIINLRENCVYVLDSLRRKIQEDYQRVINTSLKIWQAKHSIQRYRTNTIWKSIKCPCQ 611

Query: 61  ----------------------------FNTKTAYKQEEIDEVRVEWADFVGRFV 84
                                       FNTK AY+QEEIDEVR+EWADFVG  V
Sbjct: 612 MGSVECGYYVQKYIREIVQNASTHISNIFNTKNAYQQEEIDEVRIEWADFVGGLV 666

[Close]
BLAST of Tan0022593 vs. NCBI nr
Match: XP_022136077.1 (uncharacterized protein LOC111007859 isoform X2 [Momordica charantia])

HSP 1 Score: 103.2 bits (256), Expect = 1.1e-18
Identity = 56/115 (48.70%), Postives = 69/115 (60.00%), Query Frame = 0 

Query: 1   MLIVIHPRANTVYVLNSLRSKIEESFQGTINTSLKMWQAKHSLPQYRSSITWKLVK---- 60
           MLI+I+ R N VYVL+SLR KI+E +Q  INTSLK+WQAKHS+ +YR++  WK +K    
Sbjct: 551 MLIIINLRENCVYVLDSLRRKIQEDYQRVINTSLKIWQAKHSIQRYRTNTIWKSIKCPCQ 610

Query: 61  ----------------------------FNTKTAYKQEEIDEVRVEWADFVGRFV 84
                                       FNTK AY+QEEIDEVR+EWADFVG  V
Sbjct: 611 MGSVECGYYVQKYIREIVQNASTHISNIFNTKNAYQQEEIDEVRIEWADFVGGLV 665

[Close]
BLAST of Tan0022593 vs. NCBI nr
Match: XP_038895921.1 (uncharacterized protein LOC120084092 isoform X1 [Benincasa hispida] >XP_038895924.1 uncharacterized protein LOC120084092 isoform X1 [Benincasa hispida] >XP_038895927.1 uncharacterized protein LOC120084092 isoform X1 [Benincasa hispida])

HSP 1 Score: 100.5 bits (249), Expect = 7.1e-18
Identity = 56/115 (48.70%), Postives = 69/115 (60.00%), Query Frame = 0 

Query: 1   MLIVIHPRANTVYVLNSLRSKIEESFQGTINTSLKMWQAKHSLPQYRSSITWKLVK---- 60
           +LI+I+ + N VYV++SLRSKI E FQG INTSLK WQAKHSL QYR+ I WK +K    
Sbjct: 584 ILIIINLQENCVYVMDSLRSKILEEFQGVINTSLKNWQAKHSLEQYRTRIRWKPIKCPRQ 643

Query: 61  ----------------------------FNTKTAYKQEEIDEVRVEWADFVGRFV 84
                                       FNT+ AY+Q+EID VR+EWA+FV RFV
Sbjct: 644 FGAIECGYYVQKYIREIVQNSNTHISNLFNTRLAYEQKEIDAVRLEWAEFVARFV 698

[Close]
BLAST of Tan0022593 vs. NCBI nr
Match: XP_038895930.1 (uncharacterized protein LOC120084092 isoform X2 [Benincasa hispida])

HSP 1 Score: 100.5 bits (249), Expect = 7.1e-18
Identity = 56/115 (48.70%), Postives = 69/115 (60.00%), Query Frame = 0 

Query: 1   MLIVIHPRANTVYVLNSLRSKIEESFQGTINTSLKMWQAKHSLPQYRSSITWKLVK---- 60
           +LI+I+ + N VYV++SLRSKI E FQG INTSLK WQAKHSL QYR+ I WK +K    
Sbjct: 583 ILIIINLQENCVYVMDSLRSKILEEFQGVINTSLKNWQAKHSLEQYRTRIRWKPIKCPRQ 642

Query: 61  ----------------------------FNTKTAYKQEEIDEVRVEWADFVGRFV 84
                                       FNT+ AY+Q+EID VR+EWA+FV RFV
Sbjct: 643 FGAIECGYYVQKYIREIVQNSNTHISNLFNTRLAYEQKEIDAVRLEWAEFVARFV 697

[Close]
BLAST of Tan0022593 vs. NCBI nr
Match: TYK11813.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 93.2 bits (230), Expect = 1.1e-15
Identity = 54/115 (46.96%), Postives = 61/115 (53.04%), Query Frame = 0 

Query: 1    MLIVIHPRANTVYVLNSLRSKIEESFQGTINTSLKMWQAKHSLPQYRSSITWKLVK---- 60
            ML VI  R N VYVL+SLRSK+ E   G IN  LK WQAKH L +YRS+  W+ VK    
Sbjct: 1356 MLHVIDLRENCVYVLDSLRSKVNEDIHGIINVGLKTWQAKHDLQRYRSTPKWRPVKCPRQ 1415

Query: 61   ----------------------------FNTKTAYKQEEIDEVRVEWADFVGRFV 84
                                        FNTK AY+QEEIDE+R EWA FV RFV
Sbjct: 1416 LDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYRQEEIDEIRTEWAAFVSRFV 1470

[Close]
BLAST of Tan0022593 vs. ExPASy TrEMBL
Match: A0A6J1C2H7 (uncharacterized protein LOC111007859 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007859 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 5.3e-19
Identity = 56/115 (48.70%), Postives = 69/115 (60.00%), Query Frame = 0 

Query: 1   MLIVIHPRANTVYVLNSLRSKIEESFQGTINTSLKMWQAKHSLPQYRSSITWKLVK---- 60
           MLI+I+ R N VYVL+SLR KI+E +Q  INTSLK+WQAKHS+ +YR++  WK +K    
Sbjct: 552 MLIIINLRENCVYVLDSLRRKIQEDYQRVINTSLKIWQAKHSIQRYRTNTIWKSIKCPCQ 611

Query: 61  ----------------------------FNTKTAYKQEEIDEVRVEWADFVGRFV 84
                                       FNTK AY+QEEIDEVR+EWADFVG  V
Sbjct: 612 MGSVECGYYVQKYIREIVQNASTHISNIFNTKNAYQQEEIDEVRIEWADFVGGLV 666

[Close]
BLAST of Tan0022593 vs. ExPASy TrEMBL
Match: A0A6J1C4J7 (uncharacterized protein LOC111007859 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007859 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 5.3e-19
Identity = 56/115 (48.70%), Postives = 69/115 (60.00%), Query Frame = 0 

Query: 1   MLIVIHPRANTVYVLNSLRSKIEESFQGTINTSLKMWQAKHSLPQYRSSITWKLVK---- 60
           MLI+I+ R N VYVL+SLR KI+E +Q  INTSLK+WQAKHS+ +YR++  WK +K    
Sbjct: 551 MLIIINLRENCVYVLDSLRRKIQEDYQRVINTSLKIWQAKHSIQRYRTNTIWKSIKCPCQ 610

Query: 61  ----------------------------FNTKTAYKQEEIDEVRVEWADFVGRFV 84
                                       FNTK AY+QEEIDEVR+EWADFVG  V
Sbjct: 611 MGSVECGYYVQKYIREIVQNASTHISNIFNTKNAYQQEEIDEVRIEWADFVGGLV 665

[Close]
BLAST of Tan0022593 vs. ExPASy TrEMBL
Match: A0A5D3C2U9 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold398G00070 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 5.5e-16
Identity = 54/115 (46.96%), Postives = 61/115 (53.04%), Query Frame = 0 

Query: 1    MLIVIHPRANTVYVLNSLRSKIEESFQGTINTSLKMWQAKHSLPQYRSSITWKLVK---- 60
            ML VI  R N VYVL+SLRSK+ E   G IN  LK WQAKH L +YRS+  W+ VK    
Sbjct: 1395 MLHVIDLRENCVYVLDSLRSKVNEDIHGIINVGLKTWQAKHDLQRYRSTPKWRPVKCPRQ 1454

Query: 61   ----------------------------FNTKTAYKQEEIDEVRVEWADFVGRFV 84
                                        FNTK AY+QEEIDE+R EWA FV RFV
Sbjct: 1455 LDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYRQEEIDEIRTEWAAFVSRFV 1509

[Close]
BLAST of Tan0022593 vs. ExPASy TrEMBL
Match: A0A5D3CUJ0 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00250 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 5.5e-16
Identity = 54/115 (46.96%), Postives = 61/115 (53.04%), Query Frame = 0 

Query: 1   MLIVIHPRANTVYVLNSLRSKIEESFQGTINTSLKMWQAKHSLPQYRSSITWKLVK---- 60
           ML VI  R N VYVL+SLRSK+ E   G IN  LK WQAKH L +YRS+  W+ VK    
Sbjct: 243 MLHVIDLRENCVYVLDSLRSKVNEDIHGIINVGLKTWQAKHDLQRYRSTPKWRPVKCPRQ 302

Query: 61  ----------------------------FNTKTAYKQEEIDEVRVEWADFVGRFV 84
                                       FNTK AY+QEEIDE+R EWA FV RFV
Sbjct: 303 LDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYRQEEIDEIRTEWAAFVSRFV 357

[Close]
BLAST of Tan0022593 vs. ExPASy TrEMBL
Match: A0A5A7VGQ2 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold25G00330 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 5.5e-16
Identity = 54/115 (46.96%), Postives = 61/115 (53.04%), Query Frame = 0 

Query: 1    MLIVIHPRANTVYVLNSLRSKIEESFQGTINTSLKMWQAKHSLPQYRSSITWKLVK---- 60
            ML VI  R N VYVL+SLRSK+ E   G IN  LK WQAKH L +YRS+  W+ VK    
Sbjct: 1415 MLHVIDLRENCVYVLDSLRSKVNEDIHGIINVGLKTWQAKHDLQRYRSTPKWRPVKCPRQ 1474

Query: 61   ----------------------------FNTKTAYKQEEIDEVRVEWADFVGRFV 84
                                        FNTK AY+QEEIDE+R EWA FV RFV
Sbjct: 1475 LDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYRQEEIDEIRTEWAAFVSRFV 1529

The following BLAST results are available for this feature:
BLAST of Tan0022593 vs.
Match NameE-valueIdentityDescription
BLAST of Tan0022593 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022136076.11.1e-1848.70uncharacterized protein LOC111007859 isoform X1 [Momordica charantia][more]
XP_022136077.11.1e-1848.70uncharacterized protein LOC111007859 isoform X2 [Momordica charantia][more]
XP_038895921.17.1e-1848.70uncharacterized protein LOC120084092 isoform X1 [Benincasa hispida] >XP_03889592... [more]
XP_038895930.17.1e-1848.70uncharacterized protein LOC120084092 isoform X2 [Benincasa hispida][more]
TYK11813.11.1e-1546.96transposase [Cucumis melo var. makuwa][more]
BLAST of Tan0022593 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C2H75.3e-1948.70uncharacterized protein LOC111007859 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1C4J75.3e-1948.70uncharacterized protein LOC111007859 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A5D3C2U95.5e-1646.96Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold398G00070 PE... [more]
A0A5D3CUJ05.5e-1646.96ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A5A7VGQ25.5e-1646.96Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold25G00330 PE=... [more]
BLAST of Tan0022593 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0022593.1Tan0022593.1mRNA