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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGAGGTACTATCGGGTCGGGTGAATTCAATAATAGACGCGCTGTTGGCATTCCACCCTTCCTTCTCCTTTCGGGGCCTACCCAAAGAGAAATCCGATATTTCTTGGTCGTGAATATCTGAATAGGACGAACCGCCCCGTGGTTTGGTTCGGAACAAAACAATTAGAATTAGGCTCGTTGAACTGGAATGTGTATTATCCATATAGGGGATCTTTCAATGGAGAAGATCCGTCGACCTAA mRNA sequence ATGAGGTACTATCGGGTCGGAAATCCGATATTTCTTGGTCGTGAATATCTGAATAGGACGAACCGCCCCGTGGTTTGGTTCGGAACAAAACAATTAGAATTAGGCTCGTTGAACTGGAATGTGTATTATCCATATAGGGGATCTTTCAATGGAGAAGATCCGTCGACCTAA Coding sequence (CDS) ATGAGGTACTATCGGGTCGGAAATCCGATATTTCTTGGTCGTGAATATCTGAATAGGACGAACCGCCCCGTGGTTTGGTTCGGAACAAAACAATTAGAATTAGGCTCGTTGAACTGGAATGTGTATTATCCATATAGGGGATCTTTCAATGGAGAAGATCCGTCGACCTAA Protein sequence MRYYRVGNPIFLGREYLNRTNRPVVWFGTKQLELGSLNWNVYYPYRGSFNGEDPST
Homology
BLAST of Tan0022493 vs. NCBI nr
Match: QIB71948.1 (hypothetical protein [Fagonia indica]) HSP 1 Score: 72.0 bits (175), Expect = 1.8e-09 Identity = 33/45 (73.33%), Postives = 36/45 (80.00%), Query Frame = 0
Query: 8 NPIFLGREYLNRTNRPV---VWFGTKQLELGSLNWNVYYPYRGSF 50
N + +GREYLNRTN PV V F TKQLELGS+NWNVYYPYRG F
Sbjct: 43 NSVLIGREYLNRTNHPVDLFVCFRTKQLELGSVNWNVYYPYRGIF 87
BLAST of Tan0022493 vs. ExPASy TrEMBL
Match: A0A0A0LBC9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G600000 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 3.5e-22 Identity = 53/61 (86.89%), Postives = 54/61 (88.52%), Query Frame = 0
Query: 1 MRYYRVG-----NPIFLGREYLNRTNRPVVWFGTKQLELGSLNWNVYYPYRGSFNGEDPS 57
M YYRVG NP+FLGREYLNRTNRPVV FGTKQLELGSLNWNVYYPYRGSFNGEDPS
Sbjct: 1 MGYYRVGAYPKENPVFLGREYLNRTNRPVVCFGTKQLELGSLNWNVYYPYRGSFNGEDPS 60
BLAST of Tan0022493 vs. ExPASy TrEMBL
Match: A0A6C0UA12 (Uncharacterized protein OS=Fagonia indica OX=66629 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 8.8e-10 Identity = 33/45 (73.33%), Postives = 36/45 (80.00%), Query Frame = 0
Query: 8 NPIFLGREYLNRTNRPV---VWFGTKQLELGSLNWNVYYPYRGSF 50
N + +GREYLNRTN PV V F TKQLELGS+NWNVYYPYRG F
Sbjct: 43 NSVLIGREYLNRTNHPVDLFVCFRTKQLELGSVNWNVYYPYRGIF 87
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| QIB71948.1 | 1.8e-09 | 73.33 | hypothetical protein [Fagonia indica] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LBC9 | 3.5e-22 | 86.89 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G600000 PE=4 SV=1 | [more] |
| A0A6C0UA12 | 8.8e-10 | 73.33 | Uncharacterized protein OS=Fagonia indica OX=66629 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0009507 |
chloroplast |
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