Tan0022479 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAAGGTTTTTTGATGACAGGCCTTTGCCTTTTGGTGGTAGTGGCTGTCACCGGAGCTCAAGTTGCAGCGGCGGTGACATGCAACCCCAACGAGTTGAGACCTTGTCTTTGGGCCTACACAATGTCGGTGGCACCATCATCAACTTGCTGCAACAAGGTGAAGGAGCACAAACCGTGCTACTGTGGATACCTCAAAAATCAAAAGTATAAGTCCTATGTACAGTCTTCTTCTGCCAAAAAAATCATTTCTGATTGTGGCGTTCCCATCCCCGCATGTTAG ATGAAGAAAGGTTTTTTGATGACAGGCCTTTGCCTTTTGGTGGTAGTGGCTGTCACCGGAGCTCAAGTTGCAGCGGCGGTGACATGCAACCCCAACGAGTTGAGACCTTGTCTTTGGGCCTACACAATGTCGGTGGCACCATCATCAACTTGCTGCAACAAGGTGAAGGAGCACAAACCGTGCTACTGTGGATACCTCAAAAATCAAAAGTATAAGTCCTATGTACAGTCTTCTTCTGCCAAAAAAATCATTTCTGATTGTGGCGTTCCCATCCCCGCATGTTAG ATGAAGAAAGGTTTTTTGATGACAGGCCTTTGCCTTTTGGTGGTAGTGGCTGTCACCGGAGCTCAAGTTGCAGCGGCGGTGACATGCAACCCCAACGAGTTGAGACCTTGTCTTTGGGCCTACACAATGTCGGTGGCACCATCATCAACTTGCTGCAACAAGGTGAAGGAGCACAAACCGTGCTACTGTGGATACCTCAAAAATCAAAAGTATAAGTCCTATGTACAGTCTTCTTCTGCCAAAAAAATCATTTCTGATTGTGGCGTTCCCATCCCCGCATGTTAG MKKGFLMTGLCLLVVVAVTGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC Homology
BLAST of Tan0022479 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 1.7e-18 Identity = 48/97 (49.48%), Postives = 60/97 (61.86%), Query Frame = 0
BLAST of Tan0022479 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 1.7e-15 Identity = 33/68 (48.53%), Postives = 45/68 (66.18%), Query Frame = 0
BLAST of Tan0022479 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 2.5e-14 Identity = 34/64 (53.12%), Postives = 43/64 (67.19%), Query Frame = 0
BLAST of Tan0022479 vs. ExPASy Swiss-Prot
Match: A2XBN5 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2) HSP 1 Score: 62.8 bits (151), Expect = 2.4e-09 Identity = 28/86 (32.56%), Postives = 47/86 (54.65%), Query Frame = 0
BLAST of Tan0022479 vs. ExPASy Swiss-Prot
Match: Q10ST8 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LTP-2 PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 5.4e-09 Identity = 28/86 (32.56%), Postives = 46/86 (53.49%), Query Frame = 0
BLAST of Tan0022479 vs. NCBI nr
Match: KAF7112276.1 (hypothetical protein RHSIM_RhsimUnG0245900 [Rhododendron simsii]) HSP 1 Score: 115.9 bits (289), Expect = 1.8e-22 Identity = 56/95 (58.95%), Postives = 66/95 (69.47%), Query Frame = 0
BLAST of Tan0022479 vs. NCBI nr
Match: KAF7129124.1 (hypothetical protein RHSIM_Rhsim10G0070900 [Rhododendron simsii]) HSP 1 Score: 115.9 bits (289), Expect = 1.8e-22 Identity = 56/95 (58.95%), Postives = 66/95 (69.47%), Query Frame = 0
BLAST of Tan0022479 vs. NCBI nr
Match: KAF7130851.1 (hypothetical protein RHSIM_Rhsim10G0071000 [Rhododendron simsii]) HSP 1 Score: 112.5 bits (280), Expect = 2.0e-21 Identity = 54/95 (56.84%), Postives = 64/95 (67.37%), Query Frame = 0
BLAST of Tan0022479 vs. NCBI nr
Match: KAG5527976.1 (hypothetical protein RHGRI_028790 [Rhododendron griersonianum]) HSP 1 Score: 111.7 bits (278), Expect = 3.5e-21 Identity = 54/96 (56.25%), Postives = 66/96 (68.75%), Query Frame = 0
BLAST of Tan0022479 vs. NCBI nr
Match: KAF7130843.1 (hypothetical protein RHSIM_Rhsim10G0072400 [Rhododendron simsii]) HSP 1 Score: 109.0 bits (271), Expect = 2.3e-20 Identity = 53/96 (55.21%), Postives = 66/96 (68.75%), Query Frame = 0
BLAST of Tan0022479 vs. ExPASy TrEMBL
Match: A0A5D3BT00 (Non-specific lipid-transfer protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00780 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 5.4e-20 Identity = 48/88 (54.55%), Postives = 63/88 (71.59%), Query Frame = 0
BLAST of Tan0022479 vs. ExPASy TrEMBL
Match: A0A5A7VF50 (Non-specific lipid-transfer protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00770 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 7.1e-20 Identity = 51/102 (50.00%), Postives = 69/102 (67.65%), Query Frame = 0
BLAST of Tan0022479 vs. ExPASy TrEMBL
Match: A0A0A0KW80 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G141210 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 7.1e-20 Identity = 48/89 (53.93%), Postives = 64/89 (71.91%), Query Frame = 0
BLAST of Tan0022479 vs. ExPASy TrEMBL
Match: A0A6A4L2T0 (AAI domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_18628 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.2e-19 Identity = 52/96 (54.17%), Postives = 64/96 (66.67%), Query Frame = 0
BLAST of Tan0022479 vs. ExPASy TrEMBL
Match: A0A6A4L177 (AAI domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_18627 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 2.1e-19 Identity = 52/96 (54.17%), Postives = 64/96 (66.67%), Query Frame = 0
BLAST of Tan0022479 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 82.0 bits (201), Expect = 2.8e-16 Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 0
BLAST of Tan0022479 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 79.7 bits (195), Expect = 1.4e-15 Identity = 36/94 (38.30%), Postives = 54/94 (57.45%), Query Frame = 0
BLAST of Tan0022479 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 79.0 bits (193), Expect = 2.3e-15 Identity = 39/92 (42.39%), Postives = 51/92 (55.43%), Query Frame = 0
BLAST of Tan0022479 vs. TAIR 10
Match: AT5G38170.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 77.0 bits (188), Expect = 8.8e-15 Identity = 32/70 (45.71%), Postives = 45/70 (64.29%), Query Frame = 0
BLAST of Tan0022479 vs. TAIR 10
Match: AT5G38160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 71.2 bits (173), Expect = 4.9e-13 Identity = 31/77 (40.26%), Postives = 45/77 (58.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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