
Tan0022466 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTAATTTCGAGGCATCAGAGATCTCTGTATTAATTATAATCTTTCTGTTTGGGGAAAACCCCCCCTTTTTTTTTCTTTTGGGTTTAGAAATTATAATAATAATAATAATTATGGAAGCGGGAAGCGATGGAACAACAGCAGCAGTAGCAGCAGCAGCAACAACAACAGCAGAATGTTCAAACAAAAGTAGAAGTGAAAATAAGAATTCCCAAAGCGAATTGGGAAATGAAGGGAGCTCAAGCAACAGCACAATTGAAGAGAATAATGATCAACAAAAGATCAATAACAATAATAATAAGCCGACTGTGAGGCCTTATGTCAGATCCAAGCTCCCAAGACTCCGCTGGACGCCCGATCTCCACCTCCGTTTTGTTCATGCTGTTGAAAGACTCGGCGGACAAGAAAGTAAATAAACCATCTTTTTTTTTTTTTCTTTCCTATTTTCTCTCTTTTCCATTCTTAATCGAAACTATTATTTTAACATGGTATCAGAGCAAGAAAACTGAGTTTTTCAATACTTGTTGATAAGGGGTAATGTAGAATGATTCTTTCTAGGCGAGAATTCTTATTTTTAAATTGAGGATATAATTTGTATGTTCTTGATTACTATATATATGTTTGTGTGTTTTGATCTTGATATTGTATCTTATATGTTGATGATTTTGTTTGTATAGATGCTACACCTAAGTTGGTTCTTCAGTTAATGAATATCAAAGGACTAAGCATTGCCCATGTCAAGAGCCATCTTCAGGTTTACTAATCTTCTTTTTTTCTTTCTTCAAGAAACTTATTGCATAAATTCATGCCAAACTTTTCATAATGTAATTTTAATTTTTCATTTGTTTTCATTCATTGGGCGATTATTAATTTCAGATGTATAGAAGCAAGAGGAGCAATGAACCAGGCCAAAGTATGAACTTTTTTAACATCTTTTATTCAATTTCTCCATTTTCAATTAATTCAGTTATTTTTAATTTTTTTTTAATATAATTTGGAATTGAAAATGACGGCAGTGGCGGATCAAAGGCTTCTGATGGCTGAAACTGGAGATCGAAATATATTTACTGTCAGCCAAATTCCCATGTTCCAACGCTATAACCAAAGCTACACCTCCAATATTTTCCGGTAAGAAATAGACTCGGACTTTTTTTTTTCGTCAACATTTGGGAGTGAGGAGATTGACCCATGACCTGTTAGTCATAAGTGTTACTTGATGTCAATTAACCGTAAAAAAAACTGCTTTATTAATTCTTGTTATAAGCCCTTTTCAAAATTTTCAAGTTATTAGGTTGGATAATTAATTAGAAGTACTCTCAAGAATTCTAAAATCATTAACAAGAAACTTTTATGGTTTTAGGTCGACAATTACTTTTCCAAAGTTTTAGATTTGGTTTCGATAGTAAAAATTGTACCGAAATATGATTTTAGGGTTAATTAAAGTTCTGAGGTGTCTCTTCATCTTTAAATTGAGATCGTACCTCTTTGGGATCACAATTCTTAGGTCAGATTACAACCTTTTGGATTGAGTATTCATTTAGGTTTAATGTACGATATCACATTAGATTGCATAGAGATTCAATCTCAAAACTAGTCGGTTATCTATCTTATTCTTCATCTTTCATTGTTTATAGGAAAAATACTTTCATTTTCATTTCTTTTTTAAAGTCATCTCAAACTCAATATGAATCTTCCCAGATTCGGCAACCCTTCATGGAATGCTCACGAGAACAAAACAACACAAACTCCATTTACGGGGAAACCCTCAGCATTGACTCAAGCAAGACCGAGCCTATTCGGCAGCAGCACCGTCGCCACGCTGGGAACGACGGACTGCAACTTCCACAGCTCGATCGGTGAACCGAACACGACGAGCAAGGCACAAGAAGCAAGGGAAAAGGAAGATTCATGCAGTGGCATTATTTCAGAGAAAAGGAAGACCCCAGATGGAGAAATAGACTTGAGTTTATCCCTAAAGACTGCAACAAGAGAAGAAATGAAGATTGATAAGAGAATGAGGAAAGGAGGAGGAGAAGAAGAAAATGAAGAAGTTTTAGAAAGTAGAACTGATTTGTCTCTATCTTTGTGCTCATCATATCATTCAATATCTCCTTAATTAGCAATGGAAGAAGAAATTAAAGAGAGAGAGAGAGAGTAAGTAAGTACTCTGGATCTGACTATATGAATTCAAGACATCAAATTCTAAGTGAGATACTGAGGTACTTATTTCCCCAACTTGTAGCTAAGCTAAGTATGTATGTGTAACATTATTTTCTTCAAATGTATATTATAAATCAGACATGATTACTGCTAAATATATTCATGTTTTTGTGTTTTTTCA CTAATTTCGAGGCATCAGAGATCTCTGTATTAATTATAATCTTTCTGTTTGGGGAAAACCCCCCCTTTTTTTTTCTTTTGGGTTTAGAAATTATAATAATAATAATAATTATGGAAGCGGGAAGCGATGGAACAACAGCAGCAGTAGCAGCAGCAGCAACAACAACAGCAGAATGTTCAAACAAAAGTAGAAGTGAAAATAAGAATTCCCAAAGCGAATTGGGAAATGAAGGGAGCTCAAGCAACAGCACAATTGAAGAGAATAATGATCAACAAAAGATCAATAACAATAATAATAAGCCGACTGTGAGGCCTTATGTCAGATCCAAGCTCCCAAGACTCCGCTGGACGCCCGATCTCCACCTCCGTTTTGTTCATGCTGTTGAAAGACTCGGCGGACAAGAAAATGCTACACCTAAGTTGGTTCTTCAGTTAATGAATATCAAAGGACTAAGCATTGCCCATGTCAAGAGCCATCTTCAGATGTATAGAAGCAAGAGGAGCAATGAACCAGGCCAAATGGCGGATCAAAGGCTTCTGATGGCTGAAACTGGAGATCGAAATATATTTACTGTCAGCCAAATTCCCATGTTCCAACGCTATAACCAAAGCTACACCTCCAATATTTTCCGATTCGGCAACCCTTCATGGAATGCTCACGAGAACAAAACAACACAAACTCCATTTACGGGGAAACCCTCAGCATTGACTCAAGCAAGACCGAGCCTATTCGGCAGCAGCACCGTCGCCACGCTGGGAACGACGGACTGCAACTTCCACAGCTCGATCGGTGAACCGAACACGACGAGCAAGGCACAAGAAGCAAGGGAAAAGGAAGATTCATGCAGTGGCATTATTTCAGAGAAAAGGAAGACCCCAGATGGAGAAATAGACTTGAGTTTATCCCTAAAGACTGCAACAAGAGAAGAAATGAAGATTGATAAGAGAATGAGGAAAGGAGGAGGAGAAGAAGAAAATGAAGAAGTTTTAGAAAGTAGAACTGATTTGTCTCTATCTTTGTGCTCATCATATCATTCAATATCTCCTTAATTAGCAATGGAAGAAGAAATTAAAGAGAGAGAGAGAGAGTAAGTAAGTACTCTGGATCTGACTATATGAATTCAAGACATCAAATTCTAAGTGAGATACTGAGGTACTTATTTCCCCAACTTGTAGCTAAGCTAAGTATGTATGTGTAACATTATTTTCTTCAAATGTATATTATAAATCAGACATGATTACTGCTAAATATATTCATGTTTTTGTGTTTTTTCA ATGGAAGCGGGAAGCGATGGAACAACAGCAGCAGTAGCAGCAGCAGCAACAACAACAGCAGAATGTTCAAACAAAAGTAGAAGTGAAAATAAGAATTCCCAAAGCGAATTGGGAAATGAAGGGAGCTCAAGCAACAGCACAATTGAAGAGAATAATGATCAACAAAAGATCAATAACAATAATAATAAGCCGACTGTGAGGCCTTATGTCAGATCCAAGCTCCCAAGACTCCGCTGGACGCCCGATCTCCACCTCCGTTTTGTTCATGCTGTTGAAAGACTCGGCGGACAAGAAAATGCTACACCTAAGTTGGTTCTTCAGTTAATGAATATCAAAGGACTAAGCATTGCCCATGTCAAGAGCCATCTTCAGATGTATAGAAGCAAGAGGAGCAATGAACCAGGCCAAATGGCGGATCAAAGGCTTCTGATGGCTGAAACTGGAGATCGAAATATATTTACTGTCAGCCAAATTCCCATGTTCCAACGCTATAACCAAAGCTACACCTCCAATATTTTCCGATTCGGCAACCCTTCATGGAATGCTCACGAGAACAAAACAACACAAACTCCATTTACGGGGAAACCCTCAGCATTGACTCAAGCAAGACCGAGCCTATTCGGCAGCAGCACCGTCGCCACGCTGGGAACGACGGACTGCAACTTCCACAGCTCGATCGGTGAACCGAACACGACGAGCAAGGCACAAGAAGCAAGGGAAAAGGAAGATTCATGCAGTGGCATTATTTCAGAGAAAAGGAAGACCCCAGATGGAGAAATAGACTTGAGTTTATCCCTAAAGACTGCAACAAGAGAAGAAATGAAGATTGATAAGAGAATGAGGAAAGGAGGAGGAGAAGAAGAAAATGAAGAAGTTTTAGAAAGTAGAACTGATTTGTCTCTATCTTTGTGCTCATCATATCATTCAATATCTCCTTAA MEAGSDGTTAAVAAAATTTAECSNKSRSENKNSQSELGNEGSSSNSTIEENNDQQKINNNNNKPTVRPYVRSKLPRLRWTPDLHLRFVHAVERLGGQENATPKLVLQLMNIKGLSIAHVKSHLQMYRSKRSNEPGQMADQRLLMAETGDRNIFTVSQIPMFQRYNQSYTSNIFRFGNPSWNAHENKTTQTPFTGKPSALTQARPSLFGSSTVATLGTTDCNFHSSIGEPNTTSKAQEAREKEDSCSGIISEKRKTPDGEIDLSLSLKTATREEMKIDKRMRKGGGEEENEEVLESRTDLSLSLCSSYHSISP Homology
BLAST of Tan0022466 vs. ExPASy Swiss-Prot
Match: Q700D9 (Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana OX=3702 GN=At1g14600 PE=2 SV=2) HSP 1 Score: 105.5 bits (262), Expect = 1.1e-21 Identity = 48/65 (73.85%), Postives = 57/65 (87.69%), Query Frame = 0
BLAST of Tan0022466 vs. ExPASy Swiss-Prot
Match: A3AWH5 (Myb family transcription factor MOF1 OS=Oryza sativa subsp. japonica OX=39947 GN=MOF1 PE=1 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.2e-20 Identity = 47/70 (67.14%), Postives = 56/70 (80.00%), Query Frame = 0
BLAST of Tan0022466 vs. ExPASy Swiss-Prot
Match: A0A0P0X0C0 (Myb family transcription factor MPH1 OS=Oryza sativa subsp. japonica OX=39947 GN=MPH1 PE=2 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 7.8e-20 Identity = 47/80 (58.75%), Postives = 62/80 (77.50%), Query Frame = 0
BLAST of Tan0022466 vs. ExPASy Swiss-Prot
Match: Q0J235 (Probable transcription factor RL9 OS=Oryza sativa subsp. japonica OX=39947 GN=RL9 PE=2 SV=2) HSP 1 Score: 89.0 bits (219), Expect = 1.1e-16 Identity = 40/61 (65.57%), Postives = 50/61 (81.97%), Query Frame = 0
BLAST of Tan0022466 vs. ExPASy Swiss-Prot
Match: Q93WJ9 (Transcription repressor KAN1 OS=Arabidopsis thaliana OX=3702 GN=KAN1 PE=1 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 2.0e-15 Identity = 52/107 (48.60%), Postives = 69/107 (64.49%), Query Frame = 0
BLAST of Tan0022466 vs. NCBI nr
Match: XP_038882968.1 (probable transcription factor KAN3 [Benincasa hispida]) HSP 1 Score: 357.5 bits (916), Expect = 1.2e-94 Identity = 225/308 (73.05%), Postives = 245/308 (79.55%), Query Frame = 0
BLAST of Tan0022466 vs. NCBI nr
Match: XP_022978249.1 (myb family transcription factor PHL11 [Cucurbita maxima]) HSP 1 Score: 350.1 bits (897), Expect = 1.9e-92 Identity = 218/315 (69.21%), Postives = 238/315 (75.56%), Query Frame = 0
BLAST of Tan0022466 vs. NCBI nr
Match: XP_023544917.1 (myb family transcription factor PHL11 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 347.1 bits (889), Expect = 1.6e-91 Identity = 216/309 (69.90%), Postives = 234/309 (75.73%), Query Frame = 0
BLAST of Tan0022466 vs. NCBI nr
Match: KAG6603570.1 (putative Myb family transcription factor, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 345.1 bits (884), Expect = 6.2e-91 Identity = 217/308 (70.45%), Postives = 231/308 (75.00%), Query Frame = 0
BLAST of Tan0022466 vs. NCBI nr
Match: XP_008464219.1 (PREDICTED: probable transcription factor KAN4 isoform X2 [Cucumis melo]) HSP 1 Score: 344.0 bits (881), Expect = 1.4e-90 Identity = 203/294 (69.05%), Postives = 230/294 (78.23%), Query Frame = 0
BLAST of Tan0022466 vs. ExPASy TrEMBL
Match: A0A6J1ITL0 (myb family transcription factor PHL11 OS=Cucurbita maxima OX=3661 GN=LOC111478289 PE=4 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 9.3e-93 Identity = 218/315 (69.21%), Postives = 238/315 (75.56%), Query Frame = 0
BLAST of Tan0022466 vs. ExPASy TrEMBL
Match: A0A1S3CL07 (probable transcription factor KAN4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502151 PE=4 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 6.7e-91 Identity = 203/294 (69.05%), Postives = 230/294 (78.23%), Query Frame = 0
BLAST of Tan0022466 vs. ExPASy TrEMBL
Match: A0A6J1GDN4 (myb family transcription factor PHL12-like OS=Cucurbita moschata OX=3662 GN=LOC111453219 PE=4 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 1.9e-90 Identity = 217/309 (70.23%), Postives = 233/309 (75.40%), Query Frame = 0
BLAST of Tan0022466 vs. ExPASy TrEMBL
Match: A0A5A7T2P2 (Putative transcription factor KAN3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00300 PE=4 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 1.6e-89 Identity = 203/295 (68.81%), Postives = 230/295 (77.97%), Query Frame = 0
BLAST of Tan0022466 vs. ExPASy TrEMBL
Match: A0A1S3CMH3 (probable transcription factor KAN3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502151 PE=4 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 1.6e-89 Identity = 203/295 (68.81%), Postives = 230/295 (77.97%), Query Frame = 0
BLAST of Tan0022466 vs. TAIR 10
Match: AT2G38300.1 (myb-like HTH transcriptional regulator family protein ) HSP 1 Score: 160.2 bits (404), Expect = 2.6e-39 Identity = 101/194 (52.06%), Postives = 133/194 (68.56%), Query Frame = 0
BLAST of Tan0022466 vs. TAIR 10
Match: AT2G40260.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 139.8 bits (351), Expect = 3.7e-33 Identity = 90/198 (45.45%), Postives = 123/198 (62.12%), Query Frame = 0
BLAST of Tan0022466 vs. TAIR 10
Match: AT2G42660.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 115.9 bits (289), Expect = 5.7e-26 Identity = 59/94 (62.77%), Postives = 76/94 (80.85%), Query Frame = 0
BLAST of Tan0022466 vs. TAIR 10
Match: AT2G02060.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 106.3 bits (264), Expect = 4.5e-23 Identity = 51/69 (73.91%), Postives = 58/69 (84.06%), Query Frame = 0
BLAST of Tan0022466 vs. TAIR 10
Match: AT1G14600.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 105.5 bits (262), Expect = 7.7e-23 Identity = 48/65 (73.85%), Postives = 57/65 (87.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|