Tan0022408 (gene) Snake gourd v1

Overview
NameTan0022408
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
LocationLG09: 6684761 .. 6688170 (+)
RNA-Seq ExpressionTan0022408
SyntenyTan0022408
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGGGGTTGGAGACCTAATCCTGGATATACTCAGGATGCGACCGCTTTGTATTAAGATACAAACGAGGTGATCCGACGCTCATGTGGTTGACATGCGAGTGGGGGCATCCCGCACAATGAGATTGTACAAGACCGGACCGTGAATTATTAGACTCACCGATGTAACACCGCTGATAGTAAGTAGACTAATAACTTCGTAGATGACCATTAGTGACTCGACCTGAATCCTGAGCGTGTTACGGACTCCTGTCTTCGGGGGTCTGTCCTTTGACTAGTACGGGTGAGGGTGGTCACAGTTACTCGCCCAATATGCCTATCTTCTCAGGGACAAAACTAAGTATGGAGATGGGAACTTAACTACGTGAGATGGAATTCACTCGTTCTCGCCTTTAGGGAAACTAGAGGGGTTGTTCCCTTAAGTGTTGTCTCCAGGGCTTGGACAACGGGCGCCCACCCTCTCACTTGCCCGAGAGGGTTGTTGTGTATGGTCGGACAATTACAACGTTGTTGTTTATTAGAGGAGCAATGAGGACTTAAGGAGCAAGAAGTAGACACAGGGGTAAAACGGTAATTTAACCTAGCAGGTTCTACGAACAACCTGTGAAGGGTCAACTCATGGACATTGGTTATATCAGTGGACATGTAATATCTTGCACTAACGGGAGTGCAGCTACGGGCTTTAGTGGAGTGTTACCGTAGCTAATGAATGTTGATTAACAGGGTCAAAGAGTTTGATAGGTTAATCTCGGATCACTGGAGCTCGTCACTGTAGGTCCATAAGGTCCCTCGGTTGGCTCAAATTAGGTTAAAATGAGGGTTTACTGTTTTGGTGTGAATTGAAGTGTTTAAGTTCAAAAGGGCATTTATGTCATTTACATGAGATATGAATAATATAATATATAGTTTAATGTGAATGAGATTCATAATAAGCTATAGGTTAGCGTAATTGTTGAATTAGGGCTAACTGGAGAAGTTAGATTGAGAGATATTAAATTGGATGTGATTCAATTTAATAAATCCACAATATTGCAAATCTGATTTGTAAATTGAGATATGTGATATCATATAATATATGGCTATGCAAATATGATTTGCATAACCTATAGTTGTGGTAAAATGGTAAATAGGTGGAGATTTCAACTCCACTTATCTCCATTAATTAAACCCCTTTGCAAGAAGGGGAAGGTGATCATTCTCTCATTTTTGAAATTCTCACCAAAAAAAGGGAACTCTCTCTCTCAATTTTCTCTCTAACTTTTCTCCTCCCAATACCAGAACAAAAAAGATCCTACCATCTTCCTTCTTCCAAAAGAAGAACATCCGAGAAGCCAAGTGGTGGTGTTCGGTCTTCGTTCGAGAGAAGAGTTCGAGTAGTTTGAGATCGTTGGGAGAACACGAAGAGTTCGTGAACGGAAACGAAAATCGAAGCACGTCTACAATAAGTAAGTACTTGTTGTATTTTCTTTCCATTTTATGCATGTTTAACCTAGATCTAAGAGTTAGATTGATTTTAACGAAATTCAGCTGCACAACTTCACTGCGACGATTCGATCGTCTTCCGCTGCGTGGAAGTTTCATTCCCTTCAATTGGTATCAGAGCCATACGTTGGTTCTTTGTTGTGCACTGTTTTTCGGTAAAATTAGGTGGGTATTGTCTTGAATTCATGAGATGAATGTTGGTTCGCAATTATGGATGTTTTCGGTTTTGACATTAGAGTAGATTTACAGTTTTATGTTGATATGATCAATGTAAGGCCCCGTTGTTTTAGGCATTTTGTTGTAAATCGAGTCTGTAAGCTCGAGTCGTTCGTGGCAAGAGTTGGTGTGAAGAAATCGGAGGGGAAATGGGCGAGAATCGACGAAAAACAGCAAGAGGTGCTCATGCATTTTATTTTCATAGTATGAATTATTATGTTATAGTATAGTTATTCATGTGATGAATGATCAAATACTATAACATAGAAATGCATGTAACCTAAGTTAATTATTAGTTTTAAAGTGTTTAGAACTTGAATAATTAGACTTATGTTTTCTAGTTCTAATAAGATTAGAATTAGGAAATAAAAATGTAATCTTTGAATGATGACTGATTAGTAACTCTGTCTAAGAAAGGTTTTGTCTAAGGCTGGGGTATTTAAGTTGACGCTTGCGGAACACCCCTACTTGGAAACCGACCTGGGAGTGAATTCGGTCCGGAGATTTTTAGATTATATTTTTCGTGAGTGTCGTTAATTAAAAGTTGATTAATTTACTCACATAGACCTAAGTAATAATGTGATTATAAACATAGGCTAAATACCATATAAGTGTTATATTGGTAGACTTAGGTCACTATTAGCCGGTTTATCTAGGTCAATTTCGATAATTATAAATTGTTGAGTGGGAAGAAATATAGTGTATGAGATACATTTAATTTCGGACTACAAATCTCCGTTAAGTCCGCACCGTGAGATCCATACTCGGCCTCGTGGCGCAAATGGGAGTGTCCCCCTTCGGTGGTATTTGTATGGGTCAATATCAAAGTGGATGGAGAGAGTACTTATAGTGAGTGGGAGTCGAACCTGTGAAAACGGGACTCGGGGTCTCTTCTTTCGATTCACACCGTGAGACCCCTATGATCCACCTGCTAGTTTGACTTGGACCAGACAATCCCTTCGGAGGGCCTTGATCATGGGAGTCGAAACACCGTGAATTCTCAAAAGGGATACAGTTTCCTTGTTGTTTTGCCTTCCTGGTTCACCCTTCGGTGGCTATTGTTTGGACGGATACTTGGAAACTTAAAGATTGAGGGTGACACTCACAGGATTCGTTAAGTGTTAATGAATTTGACCAAATAATGGTAACTGGACGCCTAATGGAATAAGAATTATTCTGGGATTAGGGTCTGGTCGAGAAAGTCTCGTCCTAGAGGAGGAGTGTTTCTGTTCACCCTTCGGTGGCGGTCATTCTAAACCTTTGGGATATCATTGCAATTTTTAAATGACCTAGGGATCATAGGATTAATTTTTGCTAAAACTTGATTGGTTTTCAAAAGGTTTATGCGAGGCTAACACAAAATTATTTGATTTTTTCAGCTAAAAATATGTCTAGCTCAATAATCGCTTTACTTGCTTCCGACAAACTAGTGAGAGATAACTTCCAAACGTGGAAGAACAACATAAACACGATTTTAGTAACTGATGACCTGAAGTTCGTGCTTACTGAAGAGTGTCCTCAGTTGCCGAGCTCGACTGCATCACGAAGTGTTCGTGATGCATACGATCGATGGATCAAGGTCAATGAAAAGGCCAAGGTCTATATCATTGCCAACTTGTCTGAAGTATTGGCAAAGAAGCATGAGTTGATGGTCACCGCCAAGGAGATCATGGATTCGTTGCAGGACATGTTTGGACAACAGTCCTTTTAG

mRNA sequence

ATGGATGGGGTTGGAGACCTAATCCTGGATATACTCAGGATGCGACCGCTTTGTATTAAGATACAAACGAGAACAAAAAAGATCCTACCATCTTCCTTCTTCCAAAAGAAGAACATCCGAGAAGCCAAGTGGTGGTGTTCGGTCTTCGTTCGAGAGAAGAGTTCGAGTAGTTTGAGATCGTTGGGAGAACACGAAGAGTTCGTGAACGGAAACGAAAATCGAAGCACGTCTACAATAAATCTAAGAGTTAGATTGATTTTAACGAAATTCAGCTGCACAACTTCACTGCGACGATTCGATCGTCTTCCGCTGCGTGGAAGTTTCATTCCCTTCAATTGGTATCAGAGCCATACGTTGGTTCTTTGTTGTGCACTGTTTTTCGGTAAAATTAGGCATTTTGTTGTAAATCGAGTCTGTAAGCTCGAGTCGTTCGTGGCAAGAGTTGGTGTGAAGAAATCGGAGGGGAAATGGGCGAGAATCGACGAAAAACAGCAAGAGTTTGACTTGGACCAGACAATCCCTTCGGAGGGCCTTGATCATGGGAGTCGAAACACCGTGAATTCTCAAAAGGGATACAGTTTCCTTGTTGTTTTGCCTTCCTGGTTCACCCTTCGGTGGCTATTGTTTGGACGGATACTTGGAAACTTAAAGATTGAGGCTAAAAATATGTCTAGCTCAATAATCGCTTTACTTGCTTCCGACAAACTAGTGAGAGATAACTTCCAAACGTGGAAGAACAACATAAACACGATTTTAGTAACTGATGACCTGAAGTTCGTGCTTACTGAAGAGTGTCCTCAGTTGCCGAGCTCGACTGCATCACGAAGTGTTCGTGATGCATACGATCGATGGATCAAGGTCAATGAAAAGGCCAAGGTCTATATCATTGCCAACTTGTCTGAAGTATTGGCAAAGAAGCATGAGTTGATGGTCACCGCCAAGGAGATCATGGATTCGTTGCAGGACATGTTTGGACAACAGTCCTTTTAG

Coding sequence (CDS)

ATGGATGGGGTTGGAGACCTAATCCTGGATATACTCAGGATGCGACCGCTTTGTATTAAGATACAAACGAGAACAAAAAAGATCCTACCATCTTCCTTCTTCCAAAAGAAGAACATCCGAGAAGCCAAGTGGTGGTGTTCGGTCTTCGTTCGAGAGAAGAGTTCGAGTAGTTTGAGATCGTTGGGAGAACACGAAGAGTTCGTGAACGGAAACGAAAATCGAAGCACGTCTACAATAAATCTAAGAGTTAGATTGATTTTAACGAAATTCAGCTGCACAACTTCACTGCGACGATTCGATCGTCTTCCGCTGCGTGGAAGTTTCATTCCCTTCAATTGGTATCAGAGCCATACGTTGGTTCTTTGTTGTGCACTGTTTTTCGGTAAAATTAGGCATTTTGTTGTAAATCGAGTCTGTAAGCTCGAGTCGTTCGTGGCAAGAGTTGGTGTGAAGAAATCGGAGGGGAAATGGGCGAGAATCGACGAAAAACAGCAAGAGTTTGACTTGGACCAGACAATCCCTTCGGAGGGCCTTGATCATGGGAGTCGAAACACCGTGAATTCTCAAAAGGGATACAGTTTCCTTGTTGTTTTGCCTTCCTGGTTCACCCTTCGGTGGCTATTGTTTGGACGGATACTTGGAAACTTAAAGATTGAGGCTAAAAATATGTCTAGCTCAATAATCGCTTTACTTGCTTCCGACAAACTAGTGAGAGATAACTTCCAAACGTGGAAGAACAACATAAACACGATTTTAGTAACTGATGACCTGAAGTTCGTGCTTACTGAAGAGTGTCCTCAGTTGCCGAGCTCGACTGCATCACGAAGTGTTCGTGATGCATACGATCGATGGATCAAGGTCAATGAAAAGGCCAAGGTCTATATCATTGCCAACTTGTCTGAAGTATTGGCAAAGAAGCATGAGTTGATGGTCACCGCCAAGGAGATCATGGATTCGTTGCAGGACATGTTTGGACAACAGTCCTTTTAG

Protein sequence

MDGVGDLILDILRMRPLCIKIQTRTKKILPSSFFQKKNIREAKWWCSVFVREKSSSSLRSLGEHEEFVNGNENRSTSTINLRVRLILTKFSCTTSLRRFDRLPLRGSFIPFNWYQSHTLVLCCALFFGKIRHFVVNRVCKLESFVARVGVKKSEGKWARIDEKQQEFDLDQTIPSEGLDHGSRNTVNSQKGYSFLVVLPSWFTLRWLLFGRILGNLKIEAKNMSSSIIALLASDKLVRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYDRWIKVNEKAKVYIIANLSEVLAKKHELMVTAKEIMDSLQDMFGQQSF
Homology
[Close]
BLAST of Tan0022408 vs. NCBI nr
Match: KAA0046201.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK14168.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 158.3 bits (399), Expect = 1.1e-34
Identity = 76/107 (71.03%), Postives = 93/107 (86.92%), Query Frame = 0 

Query: 223 MSSSIIALLASDKLVRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYD 282
           M++SI+ LLAS KL  DN+ TWK N+NTILV +DL+FVLTEECPQ P+STA+R+VR+AYD
Sbjct: 1   MNNSIVQLLASQKLNGDNYTTWKPNLNTILVVNDLRFVLTEECPQAPASTANRNVREAYD 60

Query: 283 RWIKVNEKAKVYIIANLSEVLAKKHELMVTAKEIMDSLQDMFGQQSF 330
           RW+K NEKA+VYIIAN+S+VLAKKHE + TAKEIMDSL  MFGQ S+
Sbjct: 61  RWVKANEKARVYIIANMSDVLAKKHESLATAKEIMDSLTKMFGQPSW 107

[Close]
BLAST of Tan0022408 vs. NCBI nr
Match: KAA0048103.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 156.8 bits (395), Expect = 3.3e-34
Identity = 74/104 (71.15%), Postives = 92/104 (88.46%), Query Frame = 0 

Query: 223 MSSSIIALLASDKLVRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYD 282
           M+S I+ LLAS+KL RDN+ TWK+N+NTILV DDL+FVLTEECPQ P+S A+R+ R+AYD
Sbjct: 1   MNSLIVQLLASEKLNRDNYTTWKSNLNTILVVDDLRFVLTEECPQTPASNANRTSREAYD 60

Query: 283 RWIKVNEKAKVYIIANLSEVLAKKHELMVTAKEIMDSLQDMFGQ 327
           RWIK NEKA+VYI+A++S+VLAKKHE + TAKEIMDSL+ MFGQ
Sbjct: 61  RWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLKGMFGQ 104

[Close]
BLAST of Tan0022408 vs. NCBI nr
Match: XP_038882358.1 (uncharacterized protein LOC120073622 [Benincasa hispida])

HSP 1 Score: 154.8 bits (390), Expect = 1.3e-33
Identity = 71/107 (66.36%), Postives = 94/107 (87.85%), Query Frame = 0 

Query: 223 MSSSIIALLASDKLVRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYD 282
           M+SSII LL S+KL  DN+  WK+N+NTILV DDL+FVLTEECPQ P+S A+R+VR+AYD
Sbjct: 1   MNSSIIQLLTSEKLNGDNYSAWKSNLNTILVVDDLRFVLTEECPQAPTSNANRTVREAYD 60

Query: 283 RWIKVNEKAKVYIIANLSEVLAKKHELMVTAKEIMDSLQDMFGQQSF 330
           RW+K NEKA++YI+A++S+VLAKKHE + TAKEI+DSL+++FGQ S+
Sbjct: 61  RWVKANEKARIYILASMSDVLAKKHESLATAKEIIDSLRELFGQPSW 107

[Close]
BLAST of Tan0022408 vs. NCBI nr
Match: XP_038882242.1 (uncharacterized protein LOC120073466 [Benincasa hispida])

HSP 1 Score: 152.9 bits (385), Expect = 4.8e-33
Identity = 73/107 (68.22%), Postives = 92/107 (85.98%), Query Frame = 0 

Query: 223 MSSSIIALLASDKLVRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYD 282
           M+S ++ LLAS+ L  DN+ TWK+++NTILV DDLKFVLT+ECP +P+S A+R VRDAYD
Sbjct: 1   MTSLLVQLLASNSLTGDNYATWKSSLNTILVIDDLKFVLTKECPLIPTSNANRIVRDAYD 60

Query: 283 RWIKVNEKAKVYIIANLSEVLAKKHELMVTAKEIMDSLQDMFGQQSF 330
           RW KVNEKA+VYI+AN+S+VLAKKHE M T+KEIM+SL+ MFGQ SF
Sbjct: 61  RWTKVNEKARVYILANISDVLAKKHESMSTSKEIMESLRGMFGQPSF 107

[Close]
BLAST of Tan0022408 vs. NCBI nr
Match: XP_022158568.1 (uncharacterized protein LOC111025021 [Momordica charantia])

HSP 1 Score: 152.1 bits (383), Expect = 8.1e-33
Identity = 73/108 (67.59%), Postives = 90/108 (83.33%), Query Frame = 0 

Query: 221 KNMSSSIIALLASDKLVRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDA 280
           K MS+S I LLASDKL  DN+  WK+N+NTILV DDL+FVLTEECP  P+  A+R+VRDA
Sbjct: 5   KAMSTSTIQLLASDKLNGDNYGIWKSNLNTILVIDDLRFVLTEECPPAPAPNANRTVRDA 64

Query: 281 YDRWIKVNEKAKVYIIANLSEVLAKKHELMVTAKEIMDSLQDMFGQQS 329
           YDRW+K NEKA+VYI+A++SEVL+KKHE + T +EIMDSLQ +FGQ S
Sbjct: 65  YDRWVKANEKARVYILASISEVLSKKHERLATTREIMDSLQALFGQPS 112

[Close]
BLAST of Tan0022408 vs. ExPASy TrEMBL
Match: A0A5A7TXW7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold688G00290 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 5.5e-35
Identity = 76/107 (71.03%), Postives = 93/107 (86.92%), Query Frame = 0 

Query: 223 MSSSIIALLASDKLVRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYD 282
           M++SI+ LLAS KL  DN+ TWK N+NTILV +DL+FVLTEECPQ P+STA+R+VR+AYD
Sbjct: 1   MNNSIVQLLASQKLNGDNYTTWKPNLNTILVVNDLRFVLTEECPQAPASTANRNVREAYD 60

Query: 283 RWIKVNEKAKVYIIANLSEVLAKKHELMVTAKEIMDSLQDMFGQQSF 330
           RW+K NEKA+VYIIAN+S+VLAKKHE + TAKEIMDSL  MFGQ S+
Sbjct: 61  RWVKANEKARVYIIANMSDVLAKKHESLATAKEIMDSLTKMFGQPSW 107

[Close]
BLAST of Tan0022408 vs. ExPASy TrEMBL
Match: A0A5A7TWX1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001820 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.6e-34
Identity = 74/104 (71.15%), Postives = 92/104 (88.46%), Query Frame = 0 

Query: 223 MSSSIIALLASDKLVRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYD 282
           M+S I+ LLAS+KL RDN+ TWK+N+NTILV DDL+FVLTEECPQ P+S A+R+ R+AYD
Sbjct: 1   MNSLIVQLLASEKLNRDNYTTWKSNLNTILVVDDLRFVLTEECPQTPASNANRTSREAYD 60

Query: 283 RWIKVNEKAKVYIIANLSEVLAKKHELMVTAKEIMDSLQDMFGQ 327
           RWIK NEKA+VYI+A++S+VLAKKHE + TAKEIMDSL+ MFGQ
Sbjct: 61  RWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLKGMFGQ 104

[Close]
BLAST of Tan0022408 vs. ExPASy TrEMBL
Match: A0A5A7T0E9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00680 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.9e-33
Identity = 71/104 (68.27%), Postives = 90/104 (86.54%), Query Frame = 0 

Query: 223 MSSSIIALLASDKLVRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYD 282
           M+SSI+ LLAS KL  DN+ TWK+N+NTILV DDL+F+LTEECPQ P+S A+R+ R+AYD
Sbjct: 1   MNSSIVQLLASKKLNGDNYATWKSNLNTILVVDDLRFILTEECPQTPTSNANRASREAYD 60

Query: 283 RWIKVNEKAKVYIIANLSEVLAKKHELMVTAKEIMDSLQDMFGQ 327
           RWIK NEKA+VYI+A++S+VLAKKHE + T KEI+DSL+ MFGQ
Sbjct: 61  RWIKANEKARVYILASMSDVLAKKHECLATTKEIVDSLKGMFGQ 104

[Close]
BLAST of Tan0022408 vs. ExPASy TrEMBL
Match: A0A6J1DWG6 (uncharacterized protein LOC111025021 OS=Momordica charantia OX=3673 GN=LOC111025021 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.9e-33
Identity = 73/108 (67.59%), Postives = 90/108 (83.33%), Query Frame = 0 

Query: 221 KNMSSSIIALLASDKLVRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDA 280
           K MS+S I LLASDKL  DN+  WK+N+NTILV DDL+FVLTEECP  P+  A+R+VRDA
Sbjct: 5   KAMSTSTIQLLASDKLNGDNYGIWKSNLNTILVIDDLRFVLTEECPPAPAPNANRTVRDA 64

Query: 281 YDRWIKVNEKAKVYIIANLSEVLAKKHELMVTAKEIMDSLQDMFGQQS 329
           YDRW+K NEKA+VYI+A++SEVL+KKHE + T +EIMDSLQ +FGQ S
Sbjct: 65  YDRWVKANEKARVYILASISEVLSKKHERLATTREIMDSLQALFGQPS 112

[Close]
BLAST of Tan0022408 vs. ExPASy TrEMBL
Match: A0A5D3BBF3 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00820 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 5.1e-33
Identity = 72/104 (69.23%), Postives = 91/104 (87.50%), Query Frame = 0 

Query: 223 MSSSIIALLASDKLVRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYD 282
           M+S I+ LLAS+KL RDN+ TWK+N+NTILV DDL+FVLTEECPQ  +S A+R+ R+AYD
Sbjct: 1   MNSLIVQLLASEKLNRDNYTTWKSNLNTILVVDDLRFVLTEECPQTLASNANRTSREAYD 60

Query: 283 RWIKVNEKAKVYIIANLSEVLAKKHELMVTAKEIMDSLQDMFGQ 327
           RWIK NEKA+VYI++++S+VLAKKHE + TAKEIMDSL+ MFGQ
Sbjct: 61  RWIKANEKARVYILSSMSDVLAKKHESLATAKEIMDSLKGMFGQ 104

The following BLAST results are available for this feature:
BLAST of Tan0022408 vs.
Match NameE-valueIdentityDescription
BLAST of Tan0022408 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0046201.11.1e-3471.03gag/pol protein [Cucumis melo var. makuwa] >TYK14168.1 gag/pol protein [Cucumis ... [more]
KAA0048103.13.3e-3471.15gag/pol protein [Cucumis melo var. makuwa][more]
XP_038882358.11.3e-3366.36uncharacterized protein LOC120073622 [Benincasa hispida][more]
XP_038882242.14.8e-3368.22uncharacterized protein LOC120073466 [Benincasa hispida][more]
XP_022158568.18.1e-3367.59uncharacterized protein LOC111025021 [Momordica charantia][more]
BLAST of Tan0022408 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TXW75.5e-3571.03Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold688G0029... [more]
A0A5A7TWX11.6e-3471.15Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G0018... [more]
A0A5A7T0E93.9e-3368.27Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G0068... [more]
A0A6J1DWG63.9e-3367.59uncharacterized protein LOC111025021 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A5D3BBF35.1e-3369.23Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G0082... [more]
BLAST of Tan0022408 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35317OS04G0629600 PROTEINcoord: 229..327
NoneNo IPR availablePANTHERPTHR35317:SF16ZINC FINGER, CCHC-TYPE-RELATEDcoord: 229..327

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0022408.1Tan0022408.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding