Tan0022337 (gene) Snake gourd v1

Overview


Name	Tan0022337
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	RPM1-interacting protein 4-like
Location	LG05: 81071186 .. 81073259 (+)
RNA-Seq Expression	Tan0022337
Synteny	Tan0022337

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAGCATAGTGGGTCATTATTGAACTTTTAAAAAAAAAAAAAACTAGATTACCAGCAATAGAAACAAAGTAAAAAGCCAAAACACAATAAACACATCGAAAACCAACTTGGGAACTGTCGAAAACGAAAATCGTCTGATCTGAACCATTAATTAAAAAAAAAAAAAAAGAAATCGTCTGATCAAACAACTTTCAACACTCCTTACTCCTCCATGCTCCTCTCTTCTAACAACACACTCTCAAATTTCGCTGCCGTCGCCGCCGCCGCTTCGCCACTGCAGCAAGCACCGAGCCAAGGCTAATGGCAGTGAGTGTTTATTTTTTTTTTTCTTCCCTAATTTTCATCAACACAAAACCAAAATAAATACAACAACGTCAACCATCTCAAAATAATTAATTCATATCGTGGAATTAGAAGTTAATTTTCTATTAATCTTCCTCATTAAAAATTTTCATCAATGGCAGGGGGCAAACTCGTCATCTCACGTTCCGAAATTCGGAAATTGGGACACTGACGACGTACCGTACACCATCTGCTTCGAGAACGCCCGCGAACTCCGAGACGCCGGCGTCACCTTCGATCCCAACGATCCCGACACCTATCCTCCGGAGGTCTTCAGACCGGCCGCCTCCGCAGCGGCAAACCAGAAATCAATTCCTGCCGATCGACGCCGGCACCATCGAGGTCAGGCCGCCGGGCACAAGCCTCGCGAGCGAAGCTCAGGATCGGAGAAATTGAGCAGCGAGAGAAGCGGTTCGGATTACGCGCTTCTGAAGGAGCCGAAGCAGAGTGGGAGGAAGAAGAGTAATGAGAATGGAGTTGAAGCAATCAATAGATTTCCTCCGGCGGTGGGCGGCCATGGCGGAAACCCTAACCCTAGGGTTCGGCGGAATAATGAAGGTGAAATGATGGCGTCGGTGCCGAAATTTGGGAGCTGGGATGCGAGAGATCCGAGATCGGGAGATGGATATACGGCGATTTTCAATAAAGTGAAGATTGAGAAGCAAATTGCAGCTTCGAATCCTCAGACTGTTCCACCATCGATGAATCAAACCAAGCAACCCATCGCTCACAATACTACTACTAATGGATCCACTTCATTTGCTTCCAAGGTACTTACTTATTGTTCTTTTTTAAAAAAAAAAAAATTAATTTAATTTGTAGGGAACGAATTAAAATTAAATACATGAGAATTCGAAAGGTTTGGGTCGTCTTTGATCTTACCTATGTTTATAAACTATAAAAAATCATTATCCCTTTGATAATTATTTAATTTTTTATTTTTTATTTTTAAAAATTATGTTTGTTTTTCTACAATTTATCTTCACCTTTTCCACAATTAGTTCTATCTATCTTTCTTGAGGTAGCATTTAAGTTTCTAACCAAATTTCAAAATTAAACACAAATTTTTGAAAACTATTTTTTTAGTTTCAAAACATCGATAAGAAAATATAGAACCTCATTGGTAAAATAGTATTTTTAGGCTTAATTTTTAAAAACCAAAAAGCAAAAATCAAATGGTTATCAAATAGGGCCTACATTATTAAAATTGACATGAGAGTTTTCACTCTGGTTATAAATTTTAAATTACAGAGGCTATATTGTTATTTATTAAAATTTACAAACTAAATTATTACCAAATTGCAAAATACTTGGATTGAATTGTTACAAATTAAAACTTAAAGTCTAAATCTTTGAAATTTAGGAACCAAAAGTGCTAACTTTTTTTAGAATATTCCATCATATGTGGAATTTGAGAATTTAAACATATAACCTAAAGAAAGTATGTGTCTTAATCTTAACGGCAAAATTAATTAAGCTCAAGTTTAACGATTTTTTTTAATGCAAAGTTGAAGGATTAAAATAAAATACGTAAGAAGTTAATTGACATAGAACATCATTTGGACATTAAAATACAAATATTGAAAATTTTAGAGGCTGAATTGTAATAAAAATAAAAATTTAAAGAGACAAATATAATTTAAACTAAATTATAATTTTAAAAAACAGCGAAATGTTTATTTATTTATGCAGATATGTTGCTGTTTATGTCCAAAGTGAAGCACATGATCAC

mRNA sequence

CGAGCATAGTGGGTCATTATTGAACTTTTAAAAAAAAAAAAAACTAGATTACCAGCAATAGAAACAAAGTAAAAAGCCAAAACACAATAAACACATCGAAAACCAACTTGGGAACTGTCGAAAACGAAAATCGTCTGATCTGAACCATTAATTAAAAAAAAAAAAAAAGAAATCGTCTGATCAAACAACTTTCAACACTCCTTACTCCTCCATGCTCCTCTCTTCTAACAACACACTCTCAAATTTCGCTGCCGTCGCCGCCGCCGCTTCGCCACTGCAGCAAGCACCGAGCCAAGGCTAATGGCAGGGGCAAACTCGTCATCTCACGTTCCGAAATTCGGAAATTGGGACACTGACGACGTACCGTACACCATCTGCTTCGAGAACGCCCGCGAACTCCGAGACGCCGGCGTCACCTTCGATCCCAACGATCCCGACACCTATCCTCCGGAGGTCTTCAGACCGGCCGCCTCCGCAGCGGCAAACCAGAAATCAATTCCTGCCGATCGACGCCGGCACCATCGAGGTCAGGCCGCCGGGCACAAGCCTCGCGAGCGAAGCTCAGGATCGGAGAAATTGAGCAGCGAGAGAAGCGGTTCGGATTACGCGCTTCTGAAGGAGCCGAAGCAGAGTGGGAGGAAGAAGAGTAATGAGAATGGAGTTGAAGCAATCAATAGATTTCCTCCGGCGGTGGGCGGCCATGGCGGAAACCCTAACCCTAGGGTTCGGCGGAATAATGAAGGTGAAATGATGGCGTCGGTGCCGAAATTTGGGAGCTGGGATGCGAGAGATCCGAGATCGGGAGATGGATATACGGCGATTTTCAATAAAGTGAAGATTGAGAAGCAAATTGCAGCTTCGAATCCTCAGACTGTTCCACCATCGATGAATCAAACCAAGCAACCCATCGCTCACAATACTACTACTAATGGATCCACTTCATTTGCTTCCAAGATATGTTGCTGTTTATGTCCAAAGTGAAGCACATGATCAC

Coding sequence (CDS)

ATGGCAGGGGCAAACTCGTCATCTCACGTTCCGAAATTCGGAAATTGGGACACTGACGACGTACCGTACACCATCTGCTTCGAGAACGCCCGCGAACTCCGAGACGCCGGCGTCACCTTCGATCCCAACGATCCCGACACCTATCCTCCGGAGGTCTTCAGACCGGCCGCCTCCGCAGCGGCAAACCAGAAATCAATTCCTGCCGATCGACGCCGGCACCATCGAGGTCAGGCCGCCGGGCACAAGCCTCGCGAGCGAAGCTCAGGATCGGAGAAATTGAGCAGCGAGAGAAGCGGTTCGGATTACGCGCTTCTGAAGGAGCCGAAGCAGAGTGGGAGGAAGAAGAGTAATGAGAATGGAGTTGAAGCAATCAATAGATTTCCTCCGGCGGTGGGCGGCCATGGCGGAAACCCTAACCCTAGGGTTCGGCGGAATAATGAAGGTGAAATGATGGCGTCGGTGCCGAAATTTGGGAGCTGGGATGCGAGAGATCCGAGATCGGGAGATGGATATACGGCGATTTTCAATAAAGTGAAGATTGAGAAGCAAATTGCAGCTTCGAATCCTCAGACTGTTCCACCATCGATGAATCAAACCAAGCAACCCATCGCTCACAATACTACTACTAATGGATCCACTTCATTTGCTTCCAAGATATGTTGCTGTTTATGTCCAAAGTGA

Protein sequence

MAGANSSSHVPKFGNWDTDDVPYTICFENARELRDAGVTFDPNDPDTYPPEVFRPAASAAANQKSIPADRRRHHRGQAAGHKPRERSSGSEKLSSERSGSDYALLKEPKQSGRKKSNENGVEAINRFPPAVGGHGGNPNPRVRRNNEGEMMASVPKFGSWDARDPRSGDGYTAIFNKVKIEKQIAASNPQTVPPSMNQTKQPIAHNTTTNGSTSFASKICCCLCPK

Homology

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BLAST of Tan0022337 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.1e-12
Identity = 69/224 (30.80%), Postives = 99/224 (44.20%), Query Frame = 0


Query: 8   SHVPKFGNWDTDD-VPYTICFENARELRDAG-VTFDPNDP----DTYPPEVFRPAASAAA 67
           S+VPKFGNW+ ++ VPYT  F+ AR+ R  G    +PNDP    D+       P +S   
Sbjct: 4   SNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRTK 63

Query: 68  NQKSIPADRRRHHRGQAAGHKPRERSSGSEKLSSERSGSDYALLKEPKQSGRKKSNENGV 127
            ++     R R H         R R     K   +  GS        K+ GR   N +  
Sbjct: 64  PEQVDTVRRSREHM--------RSREESELKQFGDAGGSSNEAAN--KRQGRASQNNSYD 123

Query: 128 EAINRFPPAVGGHG-GNPNP-RVRRNNEGEMMASVPKFGSWDARDPRSGDGYTAIFNKVK 187
                   +  G G   P P  +R +   E +  VPKFG WD  +P S DGYT IFNKV+
Sbjct: 124 NKSPLHKNSYDGTGKSRPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVR 183

Query: 188 IEKQIAAS-NPQTVPPSMNQTKQPIAHNTTTNGSTSFASKICCC 223
            E+   A+ +  +  P+   ++ P  +NT++          CCC
Sbjct: 184 EERSSGANVSGSSRTPTHQSSRNP--NNTSS----------CCC 205

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BLAST of Tan0022337 vs. ExPASy Swiss-Prot
Match: Q8S3M3 (NOI-like protein OS=Elaeis oleifera OX=80265 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.0e-05
Identity = 53/219 (24.20%), Postives = 87/219 (39.73%), Query Frame = 0


Query: 8   SHVPKFGNWDTDDVPYTICFENA-RELRDAGVTFDPNDPDTYPPEVFRPAASAAANQKS- 67
           +HVPKFGNWD +++ YT  FE   R+  D    F+PNDP+   P+ F P   A  +Q S 
Sbjct: 5   AHVPKFGNWDGENISYTTYFETVHRDKGDGSKIFNPNDPEE-NPQAFYPRTVAQDHQHSE 64

Query: 68  ------------IPADRRRHHRGQ----------------------AAGHKPRERSSGSE 127
                       +   RR+HHR +                         H+ R   + + 
Sbjct: 65  KHHNDTSTDYHVVKQHRRKHHRREDREFHRYVEAPRPHRSPFQGVDMDSHRSRNHGTSAT 124

Query: 128 KLSSERSGSDYALLKEPKQSGRKKSNENGVEAINRFPPAVGGHGGNPNPRVRRNNEGEMM 187
             SS +  SD  L   P+    +++N++  E  +             + ++ R       
Sbjct: 125 MSSSVKRNSDNWL---PQHQHHRRTNKDLAEGKSWLFTTTTASSYTKSRKLSRECSSTTQ 184

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BLAST of Tan0022337 vs. NCBI nr
Match: XP_038895249.1 (RPM1-interacting protein 4-like isoform X2 [Benincasa hispida])

HSP 1 Score: 309.3 bits (791), Expect = 2.7e-80
Identity = 173/236 (73.31%), Postives = 184/236 (77.97%), Query Frame = 0


Query: 1   MAGANSSSHVPKFGNWDTDDVPYTICFENARELRDAGVTFDPNDPDTYPPEVFRPAASAA 60
           MAGA SSSHVPKFGNWD+DDVPYTICFENARELR AGV FDPNDPDTYPP       +A 
Sbjct: 1   MAGAKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVDFDPNDPDTYPP-------AAV 60

Query: 61  ANQKSIPADRRRHHRGQAAGHKPRER-SSGSEKLSSERSGSDYALLKEPKQSGRKKSNEN 120
            NQ S PAD    HRG    H+ RE  +SGSEKLSSERSGSDYALLKE KQSGRKK + N
Sbjct: 61  INQNSTPAD----HRGDY--HQRREMGNSGSEKLSSERSGSDYALLKEAKQSGRKKKHSN 120

Query: 121 GVEAINRFPP--AVGGHG--GNPNPRVRRNNEGEMMASVPKFGSWDARDPRSGDGYTAIF 180
           G E ++RF P   V GHG  GN NPRVRRN+EGEMMASVPKFGSWD RDP+SGDGYTAIF
Sbjct: 121 GAEGMSRFTPTTTVSGHGGKGNRNPRVRRNDEGEMMASVPKFGSWDVRDPKSGDGYTAIF 180

Query: 181 NKVKIEKQIAAS-NPQTVPPSMNQTKQ-PIAHNT---TTNGSTSFASKICCCLCPK 227
           NKVKIEKQI  S NPQ VPP MNQTK+ PIA  T   TT+GS SF SKICCCLCPK
Sbjct: 181 NKVKIEKQIGGSNNPQAVPPLMNQTKKLPIAQTTTTATTHGSNSFVSKICCCLCPK 223

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BLAST of Tan0022337 vs. NCBI nr
Match: XP_008458983.1 (PREDICTED: RPM1-interacting protein 4-like [Cucumis melo])

HSP 1 Score: 308.9 bits (790), Expect = 3.6e-80
Identity = 166/230 (72.17%), Postives = 177/230 (76.96%), Query Frame = 0


Query: 1   MAGANSSSHVPKFGNWDTDDVPYTICFENARELRDAGVTFDPNDPDTYPPEVFRPAASAA 60
           MAG  SSSHVPKFGNWD+DDVPYTI FENAREL+ AGVTFDPNDPDTYPP VF       
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVF------- 60

Query: 61  ANQKSIPADRRRHHRGQAAGHKPRERSSGSEKLSSERSGSDYALLKEPKQSGRKKSNENG 120
           ANQ SIPAD  RHH G+ +  +    +SGSEKLSSERS SDYALLK  KQSGRKK N NG
Sbjct: 61  ANQNSIPADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNG 120

Query: 121 VEAINRFPPAVGGHGGNPNPRVRRNNEGEMMASVPKFGSWDARDPRSGDGYTAIFNKVKI 180
            E ++RF P      GN NPRVRRNNEGEMMASVPKFGSWD RDP+SGDGYTAIFNKVKI
Sbjct: 121 AEGMSRFSPTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKI 180

Query: 181 EKQIAAS-NPQTVPPSMNQTKQPIAH----NTTTNGSTSFASKICCCLCP 226
           EKQI  S NPQTVPP MNQTKQP+       T+T GSTSF SKICCCL P
Sbjct: 181 EKQIGGSNNPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLGP 222

[Close]

BLAST of Tan0022337 vs. NCBI nr
Match: XP_022142617.1 (RPM1-interacting protein 4-like [Momordica charantia])

HSP 1 Score: 302.4 bits (773), Expect = 3.3e-78
Identity = 165/232 (71.12%), Postives = 178/232 (76.72%), Query Frame = 0


Query: 4   ANSSSHVPKFGNWDTDDVPYTICFENARELRDAGVTFDPNDPDTYPPEVFRPAASAAANQ 63
           A SSSHVPKFGNWDTDDVPYTICFENA ELR AGVTFDPNDPDTYPPE F      AAN 
Sbjct: 3   AKSSSHVPKFGNWDTDDVPYTICFENAGELRAAGVTFDPNDPDTYPPEAF-----PAANH 62

Query: 64  KSIPADRRRHHRGQAAGHKPRE------RSSGSEKLSSERSGSDYALLKEPKQSGRKKSN 123
           +S P+DRRRHH       +PRE      RSSGSEKLSSERSGSDY+LLKEP   GR+K  
Sbjct: 63  RSNPSDRRRHHDHH---RRPREQPNRDRRSSGSEKLSSERSGSDYSLLKEP--GGRRKKI 122

Query: 124 ENGVEAINRFPPAVGGHGGNPNPRVR-RNNEGEMMASVPKFGSWDARDPRSGDGYTAIFN 183
            NGV+ I+RFPP   GHGGNPNP  R R NEGEM+ASVPKFGSWDARDP+SGDGYTAIFN
Sbjct: 123 NNGVDGISRFPPTAAGHGGNPNPNPRARRNEGEMVASVPKFGSWDARDPKSGDGYTAIFN 182

Query: 184 KVKIEKQIAASN-PQTVPPSMNQTK-QPIAHNTTTNGSTSFASKICCCLCPK 227
           KVK+EK+I  SN  Q VPP  NQTK QPI      +GSTSF SK+CCCLCPK
Sbjct: 183 KVKMEKKIGGSNSSQAVPPLTNQTKQQPIPQ--IVHGSTSFVSKVCCCLCPK 222

[Close]

BLAST of Tan0022337 vs. NCBI nr
Match: KAA0054298.1 (RPM1-interacting protein 4-like [Cucumis melo var. makuwa] >TYK12335.1 RPM1-interacting protein 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 297.0 bits (759), Expect = 1.4e-76
Identity = 160/224 (71.43%), Postives = 172/224 (76.79%), Query Frame = 0


Query: 1   MAGANSSSHVPKFGNWDTDDVPYTICFENARELRDAGVTFDPNDPDTYPPEVFRPAASAA 60
           MAG  SSSHVPKFGNWD+DDVPYTI FENAREL+ AGVTFDPNDPDTYPP VF       
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVF------- 60

Query: 61  ANQKSIPADRRRHHRGQAAGHKPRERSSGSEKLSSERSGSDYALLKEPKQSGRKKSNENG 120
           ANQ SIPAD  RHH G+ +  +    +SGSEKLSSERS SDYALLK  KQSGRKK N NG
Sbjct: 61  ANQNSIPADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNG 120

Query: 121 VEAINRFPPAVGGHGGNPNPRVRRNNEGEMMASVPKFGSWDARDPRSGDGYTAIFNKVKI 180
            E ++RF P      GN NPRVRRNNEGEMMASVPKFGSWD RDP+SGDGYTAIFNKVKI
Sbjct: 121 AEGMSRFSPTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKI 180

Query: 181 EKQIAAS-NPQTVPPSMNQTKQPIAH----NTTTNGSTSFASKI 220
           EKQI  S NPQTVPP MNQTKQP+       T+T GSTSF SK+
Sbjct: 181 EKQIGGSNNPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKV 216

[Close]

BLAST of Tan0022337 vs. NCBI nr
Match: XP_011660296.1 (RPM1-interacting protein 4 [Cucumis sativus] >KGN66824.1 hypothetical protein Csa_007241 [Cucumis sativus])

HSP 1 Score: 294.7 bits (753), Expect = 7.0e-76
Identity = 159/231 (68.83%), Postives = 176/231 (76.19%), Query Frame = 0


Query: 1   MAGANSSSHVPKFGNWDTDDVPYTICFENARELRDAGVTFDPNDPDTYPPEVFRPAASAA 60
           MAG  SSSHVPKFGNWD+DDVPYTI FENAREL+ AG+TFDPNDPDTYPP       +A 
Sbjct: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPP-------TAV 60

Query: 61  ANQKSIPADRRRHHRGQAAGHKPRERSSGSEKLSSERSGSDYALLKEPKQSGRKKSNENG 120
           ANQ S PA+  R+H G  +  +    +SGSEKLSSERS SDYALLK  KQSGRKK N NG
Sbjct: 61  ANQNSSPANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNG 120

Query: 121 VEAINRFPPAVGGHGGNPNPRVRRNNEGEMMASVPKFGSWDARDPRSGDGYTAIFNKVKI 180
            E ++RF PA     GN NPRVRRNNEGEMMASVPKFGSWD RDP+SGDGYTAIFNKVKI
Sbjct: 121 AEGMSRFSPATVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKI 180

Query: 181 EKQIAASN-PQTVPPSMNQTKQPIAHNT----TTNGSTSFASKICCCLCPK 227
           EKQ+  SN  Q+VP  MNQTKQPI   T    +++GSTSF SKICCCL PK
Sbjct: 181 EKQVGGSNDTQSVPALMNQTKQPITQTTVGKSSSHGSTSFGSKICCCLYPK 223

[Close]

BLAST of Tan0022337 vs. ExPASy TrEMBL
Match: A0A1S3C9P5 (RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103498234 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.7e-80
Identity = 166/230 (72.17%), Postives = 177/230 (76.96%), Query Frame = 0


Query: 1   MAGANSSSHVPKFGNWDTDDVPYTICFENARELRDAGVTFDPNDPDTYPPEVFRPAASAA 60
           MAG  SSSHVPKFGNWD+DDVPYTI FENAREL+ AGVTFDPNDPDTYPP VF       
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVF------- 60

Query: 61  ANQKSIPADRRRHHRGQAAGHKPRERSSGSEKLSSERSGSDYALLKEPKQSGRKKSNENG 120
           ANQ SIPAD  RHH G+ +  +    +SGSEKLSSERS SDYALLK  KQSGRKK N NG
Sbjct: 61  ANQNSIPADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNG 120

Query: 121 VEAINRFPPAVGGHGGNPNPRVRRNNEGEMMASVPKFGSWDARDPRSGDGYTAIFNKVKI 180
            E ++RF P      GN NPRVRRNNEGEMMASVPKFGSWD RDP+SGDGYTAIFNKVKI
Sbjct: 121 AEGMSRFSPTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKI 180

Query: 181 EKQIAAS-NPQTVPPSMNQTKQPIAH----NTTTNGSTSFASKICCCLCP 226
           EKQI  S NPQTVPP MNQTKQP+       T+T GSTSF SKICCCL P
Sbjct: 181 EKQIGGSNNPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLGP 222

[Close]

BLAST of Tan0022337 vs. ExPASy TrEMBL
Match: A0A6J1CND0 (RPM1-interacting protein 4-like OS=Momordica charantia OX=3673 GN=LOC111012692 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.6e-78
Identity = 165/232 (71.12%), Postives = 178/232 (76.72%), Query Frame = 0


Query: 4   ANSSSHVPKFGNWDTDDVPYTICFENARELRDAGVTFDPNDPDTYPPEVFRPAASAAANQ 63
           A SSSHVPKFGNWDTDDVPYTICFENA ELR AGVTFDPNDPDTYPPE F      AAN 
Sbjct: 3   AKSSSHVPKFGNWDTDDVPYTICFENAGELRAAGVTFDPNDPDTYPPEAF-----PAANH 62

Query: 64  KSIPADRRRHHRGQAAGHKPRE------RSSGSEKLSSERSGSDYALLKEPKQSGRKKSN 123
           +S P+DRRRHH       +PRE      RSSGSEKLSSERSGSDY+LLKEP   GR+K  
Sbjct: 63  RSNPSDRRRHHDHH---RRPREQPNRDRRSSGSEKLSSERSGSDYSLLKEP--GGRRKKI 122

Query: 124 ENGVEAINRFPPAVGGHGGNPNPRVR-RNNEGEMMASVPKFGSWDARDPRSGDGYTAIFN 183
            NGV+ I+RFPP   GHGGNPNP  R R NEGEM+ASVPKFGSWDARDP+SGDGYTAIFN
Sbjct: 123 NNGVDGISRFPPTAAGHGGNPNPNPRARRNEGEMVASVPKFGSWDARDPKSGDGYTAIFN 182

Query: 184 KVKIEKQIAASN-PQTVPPSMNQTK-QPIAHNTTTNGSTSFASKICCCLCPK 227
           KVK+EK+I  SN  Q VPP  NQTK QPI      +GSTSF SK+CCCLCPK
Sbjct: 183 KVKMEKKIGGSNSSQAVPPLTNQTKQQPIPQ--IVHGSTSFVSKVCCCLCPK 222

[Close]

BLAST of Tan0022337 vs. ExPASy TrEMBL
Match: A0A5A7UH42 (RPM1-interacting protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001090 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 6.8e-77
Identity = 160/224 (71.43%), Postives = 172/224 (76.79%), Query Frame = 0


Query: 1   MAGANSSSHVPKFGNWDTDDVPYTICFENARELRDAGVTFDPNDPDTYPPEVFRPAASAA 60
           MAG  SSSHVPKFGNWD+DDVPYTI FENAREL+ AGVTFDPNDPDTYPP VF       
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVF------- 60

Query: 61  ANQKSIPADRRRHHRGQAAGHKPRERSSGSEKLSSERSGSDYALLKEPKQSGRKKSNENG 120
           ANQ SIPAD  RHH G+ +  +    +SGSEKLSSERS SDYALLK  KQSGRKK N NG
Sbjct: 61  ANQNSIPADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNG 120

Query: 121 VEAINRFPPAVGGHGGNPNPRVRRNNEGEMMASVPKFGSWDARDPRSGDGYTAIFNKVKI 180
            E ++RF P      GN NPRVRRNNEGEMMASVPKFGSWD RDP+SGDGYTAIFNKVKI
Sbjct: 121 AEGMSRFSPTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKI 180

Query: 181 EKQIAAS-NPQTVPPSMNQTKQPIAH----NTTTNGSTSFASKI 220
           EKQI  S NPQTVPP MNQTKQP+       T+T GSTSF SK+
Sbjct: 181 EKQIGGSNNPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKV 216

[Close]

BLAST of Tan0022337 vs. ExPASy TrEMBL
Match: A0A0A0M0M0 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G699040 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 3.4e-76
Identity = 159/231 (68.83%), Postives = 176/231 (76.19%), Query Frame = 0


Query: 1   MAGANSSSHVPKFGNWDTDDVPYTICFENARELRDAGVTFDPNDPDTYPPEVFRPAASAA 60
           MAG  SSSHVPKFGNWD+DDVPYTI FENAREL+ AG+TFDPNDPDTYPP       +A 
Sbjct: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPP-------TAV 60

Query: 61  ANQKSIPADRRRHHRGQAAGHKPRERSSGSEKLSSERSGSDYALLKEPKQSGRKKSNENG 120
           ANQ S PA+  R+H G  +  +    +SGSEKLSSERS SDYALLK  KQSGRKK N NG
Sbjct: 61  ANQNSSPANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNG 120

Query: 121 VEAINRFPPAVGGHGGNPNPRVRRNNEGEMMASVPKFGSWDARDPRSGDGYTAIFNKVKI 180
            E ++RF PA     GN NPRVRRNNEGEMMASVPKFGSWD RDP+SGDGYTAIFNKVKI
Sbjct: 121 AEGMSRFSPATVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKI 180

Query: 181 EKQIAASN-PQTVPPSMNQTKQPIAHNT----TTNGSTSFASKICCCLCPK 227
           EKQ+  SN  Q+VP  MNQTKQPI   T    +++GSTSF SKICCCL PK
Sbjct: 181 EKQVGGSNDTQSVPALMNQTKQPITQTTVGKSSSHGSTSFGSKICCCLYPK 223

[Close]

BLAST of Tan0022337 vs. ExPASy TrEMBL
Match: A0A6J1JVE9 (RPM1-interacting protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111490070 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 1.3e-75
Identity = 155/226 (68.58%), Postives = 168/226 (74.34%), Query Frame = 0


Query: 1   MAGANSSSHVPKFGNWDTDDVPYTICFENARELRDAGVTFDPNDPDTYPPEVFRPAASAA 60
           MAGANSS HVPKFGNWDTDDVPYTICFENARELR AG+TFDPNDPDTYPPEVF+PAA   
Sbjct: 1   MAGANSSIHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPAAHNG 60

Query: 61  ANQKSIPADRRRHHRGQAAGHKPRERSSGSEKLSSERSGSDYALLKEPKQSGRKKSNENG 120
              +  P  +    RG          +SGSEKLSSERSGS+YALL        KKS ENG
Sbjct: 61  GEHQRRPRQQPNRERGAI-------MNSGSEKLSSERSGSNYALL--------KKSKENG 120

Query: 121 VEAINRFPPAVGGHGGNPNPRVRRNNEGEMMASVPKFGSWDARDPRSGDGYTAIFNKVKI 180
           VE I+R  PAV GHG NP P         + ASVPKFGSWDA+DP+SGDGYTAIFNK+KI
Sbjct: 121 VEGISRLAPAVAGHGVNPKP---------VTASVPKFGSWDAKDPKSGDGYTAIFNKMKI 180

Query: 181 EKQIAASNPQTVPPSMNQTKQPIAHNTTTNGSTSFASKICCCLCPK 227
           EKQIAASNPQ VPP MN+TKQPIAH  TT+G TSFASKICCCL  K
Sbjct: 181 EKQIAASNPQAVPPLMNKTKQPIAHTNTTSGFTSFASKICCCLRAK 202

[Close]

BLAST of Tan0022337 vs. TAIR 10
Match: AT3G25070.1 (RPM1 interacting protein 4 )

HSP 1 Score: 75.1 bits (183), Expect = 8.1e-14
Identity = 69/224 (30.80%), Postives = 99/224 (44.20%), Query Frame = 0


Query: 8   SHVPKFGNWDTDD-VPYTICFENARELRDAG-VTFDPNDP----DTYPPEVFRPAASAAA 67
           S+VPKFGNW+ ++ VPYT  F+ AR+ R  G    +PNDP    D+       P +S   
Sbjct: 4   SNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRTK 63

Query: 68  NQKSIPADRRRHHRGQAAGHKPRERSSGSEKLSSERSGSDYALLKEPKQSGRKKSNENGV 127
            ++     R R H         R R     K   +  GS        K+ GR   N +  
Sbjct: 64  PEQVDTVRRSREHM--------RSREESELKQFGDAGGSSNEAAN--KRQGRASQNNSYD 123

Query: 128 EAINRFPPAVGGHG-GNPNP-RVRRNNEGEMMASVPKFGSWDARDPRSGDGYTAIFNKVK 187
                   +  G G   P P  +R +   E +  VPKFG WD  +P S DGYT IFNKV+
Sbjct: 124 NKSPLHKNSYDGTGKSRPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVR 183

Query: 188 IEKQIAAS-NPQTVPPSMNQTKQPIAHNTTTNGSTSFASKICCC 223
            E+   A+ +  +  P+   ++ P  +NT++          CCC
Sbjct: 184 EERSSGANVSGSSRTPTHQSSRNP--NNTSS----------CCC 205

[Close]

BLAST of Tan0022337 vs. TAIR 10
Match: AT3G07195.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 48.5 bits (114), Expect = 8.1e-06
Identity = 66/227 (29.07%), Postives = 93/227 (40.97%), Query Frame = 0


Query: 9   HVPKFGNWDTDDVPYTICFENARELRDAGVTFDPNDPDTYPPEVFRPAASAAANQKSIPA 68
           HVPKFG+W+  D P+T+ F+NAR  +   +      P+T P E+  P    A   +   A
Sbjct: 6   HVPKFGDWNNQDQPFTVVFDNARTNKRQDLYESIEKPETKPQELAPPPPQPARRIQKPEA 65

Query: 69  D---RRRHHRGQAAGHKPRERSSGSEKL-------SSERSGSDYALLKEPKQSGRKKSNE 128
               ++   R      K R ++  +++L          RSGS  A        G      
Sbjct: 66  PKPVKQDTPRAPPPTEKNRVKAPPADQLYGGGGSGGGGRSGSGSA-------GGLYGGYG 125

Query: 129 NGVEAINRFPPAVGGHGGNPNPRVRRNNEGEMMASVPKF-GSWDARDPRSGD-GYTAIFN 188
            G     R PPA       P   +R  N G    ++P F GS  A     GD  YT IF 
Sbjct: 126 GGSVGNQRQPPA--PRPTQPRQNLRGGNNGRGGTTIPPFPGSVGA----GGDMSYTQIFE 185

Query: 189 KVKIEKQIAASNPQTVPPSMNQTKQPI--AHNTTTNGSTSFASKICC 222
           KVK E+      P     + N   +PI   H+ +TN +   +SK CC
Sbjct: 186 KVKEERNEGVIRPNG-GTAGNTPSRPINSQHDQSTNQT---SSKGCC 215

[Close]

BLAST of Tan0022337 vs. TAIR 10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 45.4 bits (106), Expect = 6.9e-05
Identity = 17/30 (56.67%), Postives = 22/30 (73.33%), Query Frame = 0


Query: 154 VPKFGSWDARDPRSGDGYTAIFNKVKIEKQ 184
           +PKFG WD  DP S +G+T IFNK + EK+
Sbjct: 8   LPKFGEWDVNDPSSAEGFTVIFNKARNEKK 37

[Close]

BLAST of Tan0022337 vs. TAIR 10
Match: AT5G55850.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 45.4 bits (106), Expect = 6.9e-05
Identity = 17/30 (56.67%), Postives = 22/30 (73.33%), Query Frame = 0


Query: 154 VPKFGSWDARDPRSGDGYTAIFNKVKIEKQ 184
           +PKFG WD  DP S +G+T IFNK + EK+
Sbjct: 8   LPKFGEWDVNDPASAEGFTVIFNKARDEKK 37

[Close]

BLAST of Tan0022337 vs. TAIR 10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 45.4 bits (106), Expect = 6.9e-05
Identity = 17/30 (56.67%), Postives = 22/30 (73.33%), Query Frame = 0


Query: 154 VPKFGSWDARDPRSGDGYTAIFNKVKIEKQ 184
           +PKFG WD  DP S +G+T IFNK + EK+
Sbjct: 24  LPKFGEWDVNDPASAEGFTVIFNKARDEKK 53

The following BLAST results are available for this feature:

BLAST of Tan0022337 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYN5	1.1e-12	30.80	RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1	[more]
Q8S3M3	3.0e-05	24.20	NOI-like protein OS=Elaeis oleifera OX=80265 PE=2 SV=1	[more]

BLAST of Tan0022337 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895249.1	2.7e-80	73.31	RPM1-interacting protein 4-like isoform X2 [Benincasa hispida]	[more]
XP_008458983.1	3.6e-80	72.17	PREDICTED: RPM1-interacting protein 4-like [Cucumis melo]	[more]
XP_022142617.1	3.3e-78	71.12	RPM1-interacting protein 4-like [Momordica charantia]	[more]
KAA0054298.1	1.4e-76	71.43	RPM1-interacting protein 4-like [Cucumis melo var. makuwa] >TYK12335.1 RPM1-inte...	[more]
XP_011660296.1	7.0e-76	68.83	RPM1-interacting protein 4 [Cucumis sativus] >KGN66824.1 hypothetical protein Cs...	[more]

BLAST of Tan0022337 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C9P5	1.7e-80	72.17	RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103498234 PE=4 SV=...	[more]
A0A6J1CND0	1.6e-78	71.12	RPM1-interacting protein 4-like OS=Momordica charantia OX=3673 GN=LOC111012692 P...	[more]
A0A5A7UH42	6.8e-77	71.43	RPM1-interacting protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0M0M0	3.4e-76	68.83	AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G69...	[more]
A0A6J1JVE9	1.3e-75	68.58	RPM1-interacting protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111490070 PE=4...	[more]

BLAST of Tan0022337 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25070.1	8.1e-14	30.80	RPM1 interacting protein 4	[more]
AT3G07195.1	8.1e-06	29.07	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT2G04410.1	6.9e-05	56.67	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.1	6.9e-05	56.67	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.2	6.9e-05	56.67	RPM1-interacting protein 4 (RIN4) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 152..183 e-value: 2.9E-14 score: 52.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..145
None	No IPR available	PANTHER	PTHR33159:SF49	OS06G0636100 PROTEIN	coord: 5..225
IPR040387	RPM1-interacting protein 4/NOI4	PANTHER	PTHR33159	RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN	coord: 5..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0022337.1	Tan0022337.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane