Tan0022309 (gene) Snake gourd v1

Overview


Name	Tan0022309
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Reticulon family protein
Location	LG01: 59735368 .. 59761215 (+)
RNA-Seq Expression	Tan0022309
Synteny	Tan0022309

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGGCATCACGAGTTGACGAGTCCTATTCTGTATTAGCAATTCACAGACGGTTGACGACGAGCCAAATTGGGCGGAGGAGCGAGAGCTTGAAAGACACAGAAATGGCGAATCGCACGATCAACTGCAAGACAGAAGTAGGGAAACCCCTTGTAGCTCTGATTTGCGGTTCGTTGGTTTATTACCATTGCGCCTATCGAAATTCCAGTCTCCTCTCCCTCGTTGCTGACGTTTTCATCGTTCTTCTTTGCTCTCTCGCCATTCTTGGCCTTCTCTTCCGCCATATGAATGTCTCGTAAGCACACCCCCGTTTTCCTCTCTGTTTTGTCTTTGCGCCCAATTATGTGTTTTCTTCGATCGTTTATTGGATAACAGATGATCCTTTTTTCGTTGCTTGCCTTGTCCGTTCATGTGAAGCCTATGCTTGTAGGGTATTTTCTTGATTGGAGAACTTCTTGGAGATTATTTAAAATCGTTGGGATTTTGATAAGAATTCAATGTCAACGGACATATTAGTCGGTTTCAATTTTTATAGATTTCTTGAAAGAAATGTCGTTGAACTTAGGTCCTCCATCTGTATACATATCCTTGTCGTCGTAATGATCTTGAGTTGTAATCTGTAAACCAAAATTCAAATGATTTGCAGGGTACCGGTGGACCCACTTGAGTGGCAAATATCGCAGGATACTGCTAATAGTATGATTGCTTGGTTAGCCAATACCATAGGTGCGGCTGAGTCTGTTCTGAGAGTGGCAGCAACAGGACATGACAAGAGGCTTTTTGTTAAGGTATTCCTCTCATTAATTTGTACGTTTGTCCGCTTCTACACAGTTTTGCTCTCACTAACTTGTACGTTAGTCCGCTTCTTCACAGCTTTGGTATCTAATAACTAGACTCCCTTTTAGTGAGTTTTATGTTCTTGTAAGAACTCGAATAGGAGAATCTGAAATTGCATATTAGTAAGAAGCACACATTCACTTCTTTCTACAATCCAATATGCCCGGGACTTTTTATGGTCTTCTGATTAGAGAGGATCAAGTGTACCATAGTCAGCCTTGTGGCACGCCAAAGTCTTTTGACAACTTAACATTGGGTGAACCTTTACGTGAATAAAGTTTAGTACCTATTTCATAGGAAACTTAAAACCTTTTGTTCGTGGCAGGCTAAGAAGCACATACATGGATATGCAACACAAAGATGGCGAAGGCATATAAATCCAAATATTGTGCTTGCTTCTATCAAATTACTACGAGAGCCTTGGGCATGACATGAGTGAGGAAAATGGATAATTGAATTGTAGCAATGAACACAAGAAGGTTGATCCCCAAAAAAGTGAAGTTCTTTGCTTGGCAGGTGATGTGTGAGAGAGTGAACAACTTAGATTGTGTTAGGTATCCAAACTCAGAAAATACTAAGAATGCAAAGAAACTAATATATTGCAATATCAATGAAGAAAATTACAATATCGATAGCCTTTTGAGAGGGTTTTATCTCTCTCACAACCAATCCATTAAGGATTGACTCACCAAAAGATGACCTCCTTTCTACAAACCCTATTCCTTTTATTTATAACCAAAACTCTCTAGCTAATTACCCTTAATATCCTTGCTAATTACTACTATCTCCAAGATAACCCTATTAGTACTCTCACAATGCTCCCCTCTGATACCAATTTGTTAGGTATCCAAAAATAGAAAATATGAAAAAACACAAAGACTCTAATATATTGCAATATCATGGAACGTTACAATATAGCAATAGCCTTTCGAGAAGGCTATCTCTCTCCCAAAGTCCCACAATGGACACTCTACTAAAATGATTCCCACCAAATTAAGGATCCTAATACCCCTATTTATAACCAAGACACCCCTAGCTAAATTCCCACAATATCCCTCATTGATATACTACTAATCTCCCACATAAAACCCATACTATACCATACTAGTACTCTCACAATATCGAGCACTTCAAAACACACCTTGTCCTCAAGGTGTGGGTCAACCATTACAACAGTTAAACCAAAGATCCAACAAAAAAATAAAATAAAATGAAGACCCCAAATTAAAAAAGCATAACCCAACCCCAAATTCCCATAAAGCACTAGCAAACTTGCTGTCTCATTATTCCTTTTCAAAAAGAAATGGGTCTTGTCATGGCAATCTAGCCCATATGCCAAACCGGAGTTCATGCTGCAACTTTTTCTAACTCTTGGCCCCACCTCCTGCACTTCACGTGGTTAGGAATTTGGTTTTCCACTCTTCATGAAAATTGCAACACCTTCCCCAACCTTTCTTCTTCGTCCATTCGCAGGTGAACACTTGCATCACCTTTCCCAACCTTTTTTCTTCTTCGTCCTTCCCAACATTTGCATCACCTCGTCCTACGTTTTCTGGTGGTGATTGATCAATGGAGATGGCCGGCGACATCGATGTAAAGCAGGACACAATTTCGGCTAAGGTTATTTTCTTCAAATAGGTAGCGTGTTGCCATTTTGGGTCAAGTTTTAGGTTCAAAACAAAGAACAACCCAACCCAAAACCCATTGGGTGAAACCATCTTATTTTCTGCCATTGAAAAACAATGGGCCTCATTCAATCTAATTTACCACTAGCCCATTAAAAATCAGCTGGTAAAGCTTCAATTCAAGAAGCCCGAGGTCCCTTCTCTTCTAGAATCCTCCAATCCCACGTGATTAAGATTAGGGTTTATCACCCCCACATCCTCTTCTTCTTTTACGTGCTCGACCAACCTGGGACCCATCTGCGCACAAAATTTGTAATGACGTCGTCTCCACGAGTTCATCTCCAACACAAATGCCCTTGCTGCAGGTAATTGCTTCCATCAGTGATTTTTTTCACGATCTTCTCCTTATGATCCTTCTCCTGCAACTTCACAATCCTTGCGTCAATGCCCTCTCTGAGGTTTTGTCTTCGACCACACATGCCAACATTGTCGAAAATGGCCTTTATCGGTCTTTTCCCTTCTTTTTTTCGAACCTTGCTGGTACCGAAGCCTTCCCTCCCCCTTAATGGCCGATGGTCCCACCCTCGAAATCCAACCTTCGACATGCTGAATATTCCACCTCATTCGTGCGTGGTCTTCGAACTCTGATTGAATACATGTTGGTCTCCTCTCAATCGCCTCTCTCTGATCTACTTTTTTGACTGTCACGCAAGATTCGTCTTCCCACTAGCCTACTCTTCTTCTCAATCATTTTCACTAGCTTCTCTTTTTCTCCATCTTTCTTGCACAGAGAGGATTCATCTTCATCGGCGACCTTCCACGATTCTTCCTTCTCTTATACCATCTTTTGCGCTGTTATTGTGAAAGTGAATTGAACCTTGCCATTGGAAATTTCAAACAATATAGTGGTCATGGCTCTTTGACTCTCTATTTCTGCCACCAATCGATCCATGATCTCGACTATCCTCTGTAAAGCTTCTTTCATTTCAACCACATCCTTCTCTATTCTCGCCAACAAGAGCATAGCTCAACTGGCATCAAGTATGACTCATGATCAAGAGGTCATGGGTTCGAATCCCCCCACCCCCAATTGTTGATGTACTAAAAAAAACCACATCCTTCTCTATTCTCTCTTTCGATTGTTTTTGTGCCATTCTCTAGGATGAACGCCCTCTAATACCCATTTGTTAGGTATCCAAACTCAAAAAAATACTAAGAACACAAAGAAACTAATATATTGCAATATCAATGAAGAAAATTACAATATCGATAGTATTTTGAGCGAGCTATGTCTCTCCGCAACCAATCCACTAAGGACGTACTTACCAAAATATGACTTCCTTTCTACAAACCCTATTCCTTCTTACTAATTACTATTCGGAGCCCTTCGGAAAAGTCTCCTAGTGGCCGGGAAACGAGATCTATGTGGACGTTTAATAAACTTATTGGGAACTGCTCCCTGTTTGATCTTCCCCTAGGTAATGGACGTTTTACTTGGGCAAACGCAAGGGCTAGGAGCTGTATTGATAGGGTTTTATTGTCCACAGGTTGGATGGATGCCTTCTTTAACGCTAGCCTAAGGCTAGGTCCTAGAATCACCTCTAACCACTGCCCGCTTTTTTTGGACTCTGGGTCTCCTAAGTGGGGCCCGTGTCCCTTTAGATTCGAGAACATGTGGCTGGAGCACCCTTCTTTTAAGGCCTCCCTCTCGGCTTGGTGGCAGAGGAGGGTGACTGGAAATTGGGAAGTGTATCGGTTCATGGGTAAGCTTAAGGCTCTTAAGGAGGTGTTGAAGCCTTGGAATTGCGATGTTTCTGGCGATGTGAGGGTGAAGAAGCAAGAGGTCTTAGGCCATCTTAAATCCTTGGATAGTTTGGAGGAGGAAGGGGGTTTGAGTGAGGCTCTCAAGGAGGAGCGCTACTCGGTTAAAAAGGAGTATGAGGAGTTGGTTTGGAAAGAAACGATGAGCTGGAGTCAAAAGACAAGATTAAGATGGGCTAAGCTTGGTGACGAAAATTCTGCTTACTTTTTCATAGAGTTGCGAGTGGAAGACGCAACAATAATGTCATCCTATCTTTAGAAAATGGATTAGGTGAGGTTGTGTGGGAGCCGAGGAAGATTGAGGAAGAGATTATCTCTTTTTATTCGAGCCTTTATGCCCCTCCTATGTGTAAGCGTGGGTTTCTGGAGGGAATAGAGTGGAGTCCTATCCCTGATGAGGCCTACTCGTCCCTTGTTAGCCCCTTTACCCTTGAAGAGATTCGTCAAGTGGTCTTCAGCTTTGATAGAAGCAAAGCCCCTGGGATTGATGGTTTCTCTCTGGATTTCTTCCAGGATGGTTGGGATACCATTAAAGAGGATCTTTGGAAGGTCTTCTGTGAGTTTTTTGAGCGGGGGATTCTGGATAGCTCCCTTTCCGACACTCTGGTTTGTTTGATTCCTAAGAAAGAAGGGGCTAGGAAGGTGGGAGACTTTAGGTCGTTTAGTCTGGTGACAAGTGTGTATAAGATTATCGCTAAGGTGCTTGCTTGTAGATTGAGGAAAGTTCTTCCCCTAACCATTGCGGACTCATAAGGAGCCTTTGTGCAAGGTAGACAGATATTAGATCAATCCCTGATAGCTAATGAGGTTTTAGAGGATTATAGATCAACAAACCAGGAATGAATTCTCTTTAAGATTGATTTTGAGAAGGCGTACGATCATGTTGATTGAGATTTTCTGGATAAAGTCATGGCCAAGAAAGGTTTTGGATATAAATGGAGATCGTGGATGTGGAATTGCGTGAGAACGGTTAGTTACTCTTTTCTAGTGAATGGTCGTGCGAGGGGTCGTATCTGCGCTACGAGAGGTCTGAGACAAGGGGATCCTCTTTCACCCTTCCTTTTCCTCTTGGTGGTTGATGTTCTTAGTAGAATTATATCGCAGGGGGTGGAGAGTGGGATTCTTGAGGGGTTTAGGGTAGGTACTGAAGATTATTTGTCTCTCATCTCCGGTTTGCGGACAACACCCCGTTCTTTTGCTCTGGTAATGAGGAGTCCTTCGTTCACCTAAATAATCACCTTGCCTTTTTTGAATCTATCTCTGGGTTGCATATCAATAGGGTCAAATGCCAGCTCGTGGATGTGAATTGTGATCCTGGGAAGCTGAGAAGGTGGGCTGATATGGTCGGTTGTGAGGTGGGTTCCTTGTCGTCGTCTTATTTGGGTCTTCCTCTTGGGCATAACCCGAGGTCTTGTTTGTTTTGGGACTCAGTGGTGGTTAGCCTCATGGAAGAAGTGTTTCTTTTCAAAAGGAGGTCGTCTCACCCTGATTCAGTCTGTCCTGAGTGGTATCGCTATCTATTTCATGTCTCTCTTCACACTGCCTGTTACGATGTGCAATCGTATTTAGAAGTTAATGCAAGACTTATTGTGGGAGGGTGTGGAAGAGGGTGGCGGAGCCCATTTGGTTAATTGAGCCACAGTGTCTAAACCTTTGGACCTCTGGGGGTTGGGGGATTGGTAATTTGAGAGCTCGTAACAAGGCTTTGTTTGCCAAATGGTTGTGGCGCTTCCACAATGAAACTTCCACTCTCTGGCATAGGGTCATTGTGAGCAAGTATGGGGAGTCCCCCTCTAAGTGGGTTGGTATGTTGAGGATCCCACATTGGAAAAGTGGTGAGAAACCTCACAATATATAAGATTTGTGGGTTACTCCTCTCATGGCCAATTGGTTTTGAGATGGAACCCCATATAATCTAATATGGTATCAGAGCCCATTAAACCCAAACGGGTATTCGGTCCACAAATTGAAATTGGGATCCGATCCAAGAATGGTGAACCCAAAGAGGTACCATCTTGAGGGGGCATGTTGAGGATCCCACATTGGAAAAGTGGTGAGAAACCTCACAATATATAAGATTTGTGGGTTACTCCTCTCATGGCCAATTGGTTTTGAGATGGAACCCCATATAATCTAATATGGTAGTGATCGGGGAGGTACCTTTAGATGTCCTTGGGCTGGTATTGCGGAGGGTTTTCCTTTTTTCTCTGAGTTTGTTCATTGTCAGGTGGGTAATGGGGAGGATACCTTGTTTTGGGAAGATAGGTGGTTGCGGGATGAATATCTTTGTTCTGTTTTTCCACGTCTTTATCATTTGTCTCGTTCTAAACATAAGAGGGCGACTGATGTTTTATTTCATTCGGGTCTTCTTGCGAACCCCTCTTTCAGTTTTCAGCGTGCCTTATCTAATAGGGAGACGACCGATGTTATGTCCCTCCTCTCGCTTTTGGAAGATCTTCTGTGTTGTCCAGAAAGGAAGGGCACCCGTTGTTGTCGTCCCGATCCTATTGCGGGGTTTTTGTGTCGTTCCTTTTTCCTTTCTTTGGTTAATCCTCCTCCTCCTACTTCACAGGGGGTGTTTGCCTTTGCCTTAGTTTGGAAGGTGAGAATCCCAAAGAAAGTTAAGTTTTTTACTTGGCAGGTCCTTCACGGAAGAGTCAATACTTTGGATAGGGTCTCGAGAAGATGGCCATCGCTGGCCGGGCCTTGGTGCTGTATTCTCTGTAAGAAGGCGGCAAAGGACATTGACCATTTGTTTTGGAGGTGCGAGGTGGCTCAGGACGTGTAGAAGCATTTTGTCGGAGAGTTTGGGCTCCCCTTTTTTGGAGGGTGGGGATTGTAGAGAGATTTTGGTGGAGTTTCTTTTGCATCCCCAGGTTCGTGGGGAGGGACTTTTTTGTGGAGGGCTGGGGTTTGTGCTATTCTTTGAGGGCTTTGGGGGGAGAGAAACAATAGAGTCTTTCGAGGGGTCGAACGATCCTCTTTTGATATTTGGACCCTCACTAGATTCTATGTTTCTCTCTGGGCCTCGGTGGCTAAACCTTTTTGTAATTATCTTTTAGACTTTATTTTTCTTGGGTGCAGCGCTTTGTTGTAAGCTCCCCCTTGCCCTTTTGTGGGCTTGTTTTTTGTACGCCTGTGTATTCTTTCATTTTTTCTCAATGAAAGCTTGGTTTCTCATAAAAAAAAATCATTTGTTGTGGGATTACCAATTTGCTTATTCCCTTTGGAGCCTGTGCTTAAGTTCTTTTGGTCTCGACTATGCTCGAAGCAGAGATTGTGAATCTATTGAGGAGGTGCTCTTGAATTCTCCCTTTCTTTTGATCTTCACTAAGCTCAAAGCAGAGGTTGTGAATCTATTGAGGAGGTGCTCTTGAATTCTCCCTTTCTTGATAAGTACAGAATTCTGTGGCTGACTTTTTATTTTTTGCAGCTTTGTGCTGGGATTTGTCTGGGGAGGAACAATGAGATTTTTAGAGGGGTGGAGAGATCTTAGGAGTAAGTATAAGAGTTTCTTAGGTTAATGCCTCCTTGTGGGCATCTGTCCAGCGGCCATTTTGTATTCTTAGCTTGGTTTTATTCTCTTGGATCTTGTAGTTAGTTGTGTTGTGAGTTTCTTTTTGCTAGCTTGTTTTTTGTATGCGTTTGTACGTTCCTTCATTTTACTTAATGAAAACTTGGTTTTTATAAATAAAAAATTGTAGCAGAACAATGAAAATGTGAGTGGGAACCATGTTCGGGGAGTTGAAGAAATTGCTAAATGGAGAAGAACATTGCAGCACTCTGAGAGGGAATGAGTATTATTGATGGCGAAGGAGTACTTGGAGAGGATGCCCCAACAAGGCCACTTATAGTGGAGATTGGAAAAGGGAAACAACTAATTGAACTTGTTGGGAAATGTGAAGAGCGAATCAAGTGAGCTGAATTGATTGCCAATTAAAGTCAGGGAAGTAATGGTGTTGGAGATCAAATTGGCTATGTTAGAGGGAAACAATCTTGATGGGTAAATTTTTCTGAGTGATTTTTTAAGCTGAATAAGATAAGTGAACTGAAAAGGAAACAATGAATCTGAGTATGTATGGCCAAGGATGCTCCAACCTAGTTTCTTTTGATGGAGTTCAATTCTTCCATAGATAGAATTGAAAAAACTCTTATAGCTCAATCTTGAGAAATTCTTCACTTTGAACCAGGAAGGGACGGTGAATAAATTATGGCAACAACTTGAAATTCTCGCCACCCCACCATCCCCCTACTCAACTTAACAGAGTTGGTACTAGAGCGAATGATCATGACAGGGAATATGCTTGAGAATAAGACGGAGGCGAGAGTAGTAATACCAGTAGACCTGGAAGCTATTGATGAGGGTGGCCTAGTTCGTGACAAAAATGAACTCCTTTACGGAAAGGGGTTGAATAAGACTACCTTCCACATCTTTATTAATTTTTTAGAACTTTTAGGCATCTCTTCATATTCTCTGGTATTTCCCAAACTATCAGGCATTAAAGAATGTTCTTGGAACCAAACTCTCCCACCTACGTGTAAATCCCCTTTTGCCTGAAGGCTCTTTTTTTTTTTAAATCTTTTCATCTACCACTTTACAAATCATAGATCTGGTTCATTTTTCATTTTCTTCCCCCATTGAATTGCATCAACGGAATTTCCATAACACAAATCTTTGCTATGGACCAAAGCACTGCAATCTAACAAATTTCTTGGACAAGGGCTACCCACCACACAAATCATTATCTCTTTTAACTTAAGTACAAGCTTCAAAGCAGTTAATCTAGTTTATAGTTATTGAAGCACATTCGATGAAACCCTTCCTAAGGCTTCAAAGAACTGTTCTTTTTCCAAACCACCTAAATCTTCAAAAGATCTGTTTTTTTCCAAACCACCAAAGGCATTCCTCTCAAATTTTTGTCCCTCCAATATAACAGGGAATAACATTCAGTTTCTCATTTTTAATAGCGTTCCATCTTTTGAACTTCAACTGGAAAATCCCCACTATTGTCCAGCCAACCAATTCATATAGTGATATAATCCATGCAACTTTTCTATTTTGCATTTGAGCAAAGATTTTTTTGACATGAAATGGAATAAGCCTACCTATCTCATCACAATCCACCTTTTAAGGCTAAAGCAATTGCAAACTAGTCACCATGCCCATTCCATCCAGTAATTAAAGTGCAATCCTGTTAAATTTTGCAAAATCTATTTCTTTTCTTACCCATAATTCCTTTTGCAACCCTCTGCTTTATATAAAATCGAAGGAAGGCTTGTTGGGGAGGTCGCTCTTGAGAGGGGACTTTCGTTCTTGGAGCCCTGACTCCCATGACGGTTTTTCTTGTGGCTTGTTCTTTCGATGCTTATTGAATCCATTCTTAGTTGGCGAGTCAATTCTGTGGAAGGTGAAAGTTCCAAAACAGGTTCAATTCTTTGTTTGGCGGGTCATCCATGGAAGAGTAAATACTGAGATCGACTCTTGAGAAAGATGTCTTCCCTGATTGGTTTGTTTTGCTTGATCAGTTTGGAACTCATTCTTTGAGGGGGTTGGTTTGCAGTTTGCTAGGCGTAGAGGTCTTCAGGAGATGTTATAGGAGTTCCTTCCTCATTTTCCGTTTTGGGAGGAAAATTTTTTGTGGCAGGTCGGGATTTGGACTTTTTTATGGGGTTTATGGGATGAGAGAAACAATAGGACCTTTAGAGGGCTTGAGAGGGACCCTAGTGATGTATGTTCTCTAGTTAGATTCTATGTTTCTCTTAGGGCATTGGTGATGTGTTTGTTTTGTAATTATCCTTTATGCCTTATTTTGTTTGAATGGAGCTCGAGTTCCCTTTTGTGGGCTTGGTTTTTTTGTATCTTCTTGTCTTCTTTCATTTTTTTTCTGAAAGCTCAGATCTTGAGAATAATTAAAAAAAAAAAATTGAAGGAAGGCTCCATATAGGTTATTGTGAAAATATTACAAATCCTCTCCAAAACAAGCTTGCTGCTTCCTTTTCATGAACTTTTCCCTTTTCTTCAAATTATCTTCGACAATCTCGTATAGTTTCCGGAAAGAAAAAGACCTTTCATTTGTTTTTTGCCAAAAGAAATAACAATCCTTTTTCTAGTTCTTTAACAAACTCGCAGTCCATGGAGATTGAAGAAGCTCCACCAGAGACGTTTCTAATCAAAGTACCTGATCTAGCTTAGTCTAATGTAACAGGAGTAGAGATTCCTTTTCTCCTCCAGCACAAAAAAGAGAACCGCATGTAGCCAGGGAACACTCCAATTGAAAAAAAACGTGTATTCTGCATGACAACTTCTTAATTCCAACTTATCATTTTGATCCTGATAACCCCAGAGGAATAAAATGAGACTTATATTTGCTTAGTACCTAAAAAGTTTGCTTCCAAGTTAATGAGTTTCGACCCATAAGCCTCATCTCATGTGTTTATAAGATTGTTGCTCAGATTTTTTTCTGACCGTTTGAAGCTACCCCTGGCCACTACCATTGCAGATAATCAATTTGCATTTGTTTCACAAAGACAGATTCTTGATGCTTCTTTAATAGCTAATCAGTTGATTGACAATTGAGCCAATTGTAATCTAAAAGGTGTGATTTTGAAGCTGGATCTAGAAAAGGCTTTTGATACAGTTGACTGGGATTTTCTTGATGTGGTGTTACAAACAAAAAGTTTTGGGAGTCTTTGGAGGAAATGGATCCATGGTTGTATTATTAGTGCAAACTACTCTATTATTATAAATGGTAGGCCTTGTGGGAAAAATTATTCCTAGTCGTGGTATTCGACAAGGTGATCCTTTATCACCTTTCCTCTTTATTTTGGTCTTTGACTATCTCAGTCGGTTGTTGACCCATAGTGCTAATAGGGGCCTTGTTTCAACCCAATTGGTGCATCATCCTTCTGTTTAAACCATTTGCAGTTTGTAGATGATACTTTACTCTTTTCTACAACTGGTCGACCTACGCTGAAACATTTGTTTGAAGTGGTTAAAATTTTTGAGAGGGCTTATGGTTTAAAAATTAACCTTGCGAAGAGTGAGATTTTGGGTATTCACATTGATGAATCTGAGTTGGAATGGATGTTGTCGACTTTTGGTTGCAAACAAGGTATGTGGCCGACTACCTATCTTGGATTGCTTTTGGGAGGGAATTCCAAAAATATTTCTTTTTGGACTCCAATAATTGAACGTCTGCAACAAAGACTACATAATTGGAAGTATGCTTTTATTTCTAAAGGTGGAAGACATACCCTTATACAAGCTACACTCTCTAGTATGCCTTTGTATTATATGTCTTTGTTCAAACTCCCGGCAAAAGTAATTTTGATTATCAATAAATTATTAGGGATTTTTTTGGGGAAGGAGCAAGGGGTGGTGGTGGAGTACATAATGTGAAGTGGGCAAGCACACAACTCCATACACTTTTGGGTGGTCTTGGGATTAACATTTTTGAGCAGCGTAACATGGCCCTCTTAGCAAAATGGTTTTGGCGTTTCTCTCAGGAACATGGTTCCCTTTGGAGAAAACTTATTGTTGCAAAGTATTATGATCATATGTCGGTAGTCGATTGGCCTCCTTTTACTCCTCCTAGTCCTCATAAATCCCCTTGGAGATTCATTTCTGCTGTTCGAGATTTGGTTTCTTCTCATTCGATTAGGCGTATTGGGAATGGTTGTGATACTCAGTTTTGAACTGATTCTTGGCTTAGTTGTGGTCCTCTTGAAACTGCTTGTGCCCATGACTCTTTAGGCTTTCTTTGTTCCTTGATTCTAATGTTGCAAGTCTATGGAATTCCACGGATTCTGCATGGGATTTGAAGCTTCGGCGCAACTTAATAGATTTGGATACTATTGAATGGGCCTATCTTTCTCAACTACTCTCCCCTATAAATCTTTCGAATACAGATTTTTATACTATTGAATGGGCCTAGTTTTGAAACTGCCTTCTTGATGTTTCTCTGTTAAATCTCTTACAGAGAGTTTGTTGTTTCCTGATGATTTGCTGCCATGAGACATCTATTTGGTAATTTGGAAGAATAAATATCCAAAGAAAATTAAGATTTTCCTTTGGGAACTTAGTCTGGGAGCGTAAATACTTCTGATAGACTACAAAGAAGAATGCCTTATATTAGTCTTCCCCCTCGTGGTGTCCCTTGTGTCATCTAGTTTCAGAGACTGCGGGCCATTTGTTCGTGCATTATTTGTTTGTTCAATGTTTCTAGTGGTGTATCTTGGATGGTTTCGGTTGGGTTGTGCCTCAAATAATATTTTTGATTTTCTTTCTTCCGTTTTGGTGGGCCATTCGTTCAAAGAAGGTTCTTTGGTTGGGTTTTTCGTGCTTTTTTGTGGCATCTTTGGATCGAGGGGAATAGTCAACTTTTCAGGGATGTTTCCTCTCCTTTTGAACGTTTTATGGATCATGTTCTTTCAATTGTTTATTCGTGGTGCAAGCATGTACAACCTTTTGGTCTTTACAGCTTATCTTTTTTATGTCTAATTAGCGATCATTCTTGTAACTCACCTTTTGGTGCTCGGAGTTATCTCCATTTCATTTATCAATGAAATAGTTCCTTATACCAAAAAAAATCATTTTGATCTTGTGCATCCAATGACCTATTTTGCTTCACTCTCCATGTCTTACTCTCCACTTTTAGTTATCTTCTGCATTAATGGTATTTTTGCATATTAGACTAACAACTATTCGGAATGTTGGATCTATACAAGATTGTGTACTTGTTTCTTTTACCATTCAAACTCTTTTCCAATTACCCCCCACACACACACACACACATATATCAGTGTTTTCGAGGTGCACCCAGGCGCTCGCCCGAGGCGCAAGGCGCGGCGAAAATGAGGAGTTGCGCCTCCAACACCTGCAAGGCGGGCTACTTCAAGGAGGCGCTACCGTTACGCTCGTGGCGCGCCGCAGACTCGCGTGTCGGGTTTTTTTTTTTTTTTTTTTTTTTTTAATTTAAACTTAACTTCATCTACACGAAACCCTAAATGCCAACCCACACATAAGCCCATGAACTCCATGCACCATGCATTTGACGCTTCGTAGGTTTTTTTTTAATGAAAAGTTGAAAACGGTCCAGACTTCTCCTCTCTTCTCGAGTCCTCTCTTCATCGATTGCTTTGCTACTGGACATTGGTTGGACGTTTTTCTTCATCGATTGTTGCTGGTCGTTGGTGTTGCTGGTGGTGTCGCTGTGGTCTTTGGAAGCTTTCCTTCATCATTCTTGCTTTGGAAGTTCATTGATTCGCCGCTTCTTTGCTCTTACATTCATCGATTGCTTCGCTCATCCTCATCGATTGCTTCATTTGTCGCTTTGCTTCTTCTGTTGGTTTTTCTTCATCGATTTCTTCTTTCTTCTTCTGTTCGTTTGCTGCTGCAGTGCTGCTTCTCTTCCTAGTTTTGGTTGGTTGTTTGGTTTGGTTGGTTGTTTGGTTTGGTTGTTCTGTTCCTAGTTTTTCTTCTTGCTTCTTCATTGATTGCTGGTTGGTGGTGGTGTTGCCGTGGCTAGCTTCTTCAATTTTCCTTCTTCTAATAGGGATCAATCAATATGGGAGATGTTGATACAAAAAGAAAGCACCCCTGTTGGAAATATGTTGTTTTGGAGGATGAGAAAGACACAAATTCTTGCAAATGCACATTTTGTGGAAAAATCACAAAAGGTGGAATTTGTCGAGCAACTCATCATTTAGTTGGTGAAATCGAAATGTAAAAGCATGTTTAAAGTGCCCAACCAATGTAAGAGAGGAATTGAAGGATTATCAAACAAAAACAAAAGCAAAGCGAGAAGAAAGTAGTGCACTAACAAACTTCGAGGATTATGATTTGAATGCAATTGATGAAGAGGATGAGATGGATGCCATTGGAGGATTGAGTTGGCATCTGGAACATCTAGAAAGCGAGCTCTTGGTAGTGCAGAAGGATCTAGTGGAAGTCGGTCACAATTGAACTTGAAGCCACCACGACAAAAGGGAGCCATGGATAAATTTGTTTATCCCGATCTAACCAAAGTTGTTGATGATAGGAATAGGATGAAGAAGTTGAAGCAATCTAGCATTACAGAAAAATATAACAAGGAGGGAAGGGATACTACGATTCAATTCATCATGCGTTGGATTTATCAAGCAGGTATCCCGTTAAACACCATTCGCTTAAGAAGTTTTCATGTAATGTTAGAAGCAGTTGGTCAATTTGGTCCTGGTTTGAAGCCTCCTTCTTATCATGAGGCTAGAGTTACATGTTTGAAAAAGGAGGTAGAATTTACTAAAACAATAGTTAATAATCATGAGGTTGAATGGAAAAAAAATGGATGTTCGTTGATGTCAGATGGGTGGACAGATAGAAGAGATAGAACTTTAATAAACTTTTTAGTCCATTCTGCGGCTGGAACATTATTTTTGGAATCCATTGATGCATCTTCATGCATCAAAACTGGTGAAAAAGTATTTGAACTCTTGGATGGAATGGTAGAGAAGATTGGAGAAGAAGTTATGAGTGGTCTACTTCAAGTTGTGTAACGACTAATACCATCAAAGAATGACCAAAACCGATGCACGGTGGAATTGGAGTTCTATTCGGAAACTAAAGGCATGTTTGGCATCGATTTAGCTATCAACACGAGGAAAACTAAGACGCCAGGTAATGTTATTCTTTAAATGTTTGAGTTTTAAACTAAAGTTATTCCAAGAGTTAATCCTAAACCATTTTAAACATGTGACAATGTGAACAACATCATGGTGGGCTCTTTATGGGGGTAGTACTCCAATTCTACAAAGGTTGGCCATGAGAGTTCTAAATCTCACATGTAGTGCTTCTGGTTGTGAACGCAATTGGAGTGTTTTTGAACACGTGAGTGGTTAATTTGTCTTATACCTTATTAATTTAATATTTAAACATTACTTTTTAACTCTATATTCATTATTAATTTTGTAGATTCATTCGAAGAAGAGAAACAGATTAGAGCAGAAACGTTTAAATGATTTAGTTTATATAAAATACAACCAAGCACTTAAAGAACGCTTCGATTTGAAGGATCAACTTGATCCAATTTCTCTTAATCATATTGATGAGAGTAATGAATGGTTGGTTGGAACGCTTGAAGAAGAAGATAATGAACTTGAAGCTGATAATGAGTTGGTTTTTGATGATGACGACCTCACATGGGGAGATGTGGCAGATGCTAGTGGTGTTAGAGAACCTCTAAAGTACACTAGGTCTAAAGGGAAGTCAACTGTTGCAGCTTCATCTTCTAGAATTCGAACACCAACACCTACTATACAGGCGGTTAGTGATGAAGATGATGACAATGTAGAGGAATTGGATCTTGAAGAGGAGAATGATCAAGGAATAGCATGAGATGACGAGTTAGATTTAGATGGGGAGGAAAATTATGATTATGACATTTGATTGATATTTTAGACTTTTAAATTTAGAGTTTTATACTAGTTTTTCCTTTATTGTTGGTTCACTGATTCATTATTTCATAATTTTCATTCTTGATAACTTTAGACATTTGATTGATATATTAAGTTTTTAAGGTTTTTTCATTTTATATGATATTTACTATACAATTTATGGTGTATATATTATTTATTTATATATATTTAATTATTGCGCCTCGCATCACTCGGGCCACGCCTTTTTGTCGCCTCTTGCCTTCGGGCTATCACAGGGCTTGTCGCCCTGAGGTGCGCCTTGCGCTTTGAAAACACACACATATATATATATATATATATATATATATATTGGAAATTGGAGGTCCTTTTTACAATCACTTTGGGCGGAGTTTGGGTTATAATATATTGTCTTCCCTAAATCCTTTTCTGTATACGGACATTTCGAAATAAATATTTTCCTTGTTTCTTATGAAAAAAGCTTAGTATGCTAGCGCTTTCATACCATTACATCGAGTAAGCCTAGACAAATTCATATGAACATTTTTATTGCCACGTGAAACTCAAGCTTTTCTTACCATCGATACATGGAGTCCAAAATGTTGGTATTATGGAAGTAAGGTTAAATTACAAGTTTAGTTTTTGAACTTTCAAGTTTGTGTCTAATAAGTTCTTGAACTTTAAAAAGTGTTGAATAAGTTCATTTAATTTTGTCTCTAATTAGTGTTTGAACTTTAAAATTGTTTAATAGATCCTTGGACTTTCAATTTTATATCTAATACCCTGACATTTTTGATATTTTGAAAAATGAACAAATCTATTAGACATAAAATTGAATTTTGTATTTAATAAGACCCTAACTTTCATTTTTGTATACAAAACTTTTGTGAATTTTCAAAAAAAATATCAAATAAGTAAAGGACCTATAAGACTCAAAATTGAAAGTTCATGGACTTATTAGATACTGTTGAAAGCTTAGGAATCTGTTAGATACTTAGGAGTCTATTGGACACAAAATTGAAAGTCCAAAGACAAATTATACACAAAATTGAAAGTTCATGAACTAAACTTGTAATTTTAACCTAAAAGTAATTAAATAAGTATATCTATCAAACAAATTGCACGCCCGAGGTGCTTATTCATTCAGTGAGTAGATCAGATAATGAAAATTGAATAATTAGTATTGATTTTCATTGATAAACGAAGAGGTTTCATCAGAACATATTATTTTTTTCATGGTACATTTACCAGTTTATATTTGACTTTGTTTGCGAGAACTAAGTTGCTCTACCTACTATGATTTTTCCAAACCATCTTCTTAAAAGGAACAGCTGTATTCATTCCTCATTTCGTGATAAATATTGTAAATTAAAATTATGGAAATCTTTCTCCAGGTCGTTGTTTGCCTTTACGCCCTCTCAGTCCTTGGAAGATTGGTTTCAGGTGTTACAGTTGCCTACACTGGTATGTCTGTCACTTCAACTTGCCTCTATTTCTGCTATCCTAAAAGAAAAGAAATATTGAATGACGATTTGATAGGACATTTTTGTTTTAAATACTATTTTAGTCCCTATACTTTTAGCTTTGGTGAAACTGTTTAGCGCAAAGCTATACATTTCAAAAAAAAAAAATTAAAAATTAAGTGTAGTGTTGTGATTAAATTGGGATTAAAAAAATGAGATTAAAAAGAAAAGGAAAGGACCAAAATGCTCAATTTTTATAAGTACAGGAACAAAAACGGATGTTTCAAGAGAACAAGGACTAAATTGGACAATATTGAAAGTAAAGGGACCTAAATGGACATTTTGAAAGAACAACAACCAAAATGAACAAAAGTTGAAAGTACGATGACTAGTCAAGAATAGTAATTTAACCGACATTTTTCTATGCTCTCCTTGTTTAACTCCTCTTCGACTCATCGTATGGTGCATAGTAATTTAGTTAGTTTTACCATCTGATTTGTCGTATAGCAGATATCTACCTATTTGCAATTTCCCTTCTTTTGTCAAAGATTTTCAGGGCTCGTTTCTGTTTATACTATAGGCATAAATTAGATTCTTTTTGCATATTTATGGAACCAATCTTGTCTTTGAAGCTAAGAGCTCTGGATTAACAGGTCTATGCATGTTGTGTATATACATGGTGTTGGAGAATTCTGAGTCAATCGGTGCTTCTATTTCTCCTTTTCTTAGGAGAGGAAACGACCCTACTCCACACCAAGATACTATCTAATAATCTTCACTGGCTGTAACCCTGTTTTGTCACTGTAGATAGATACATCTGTGAATATTATCGTTAACAGAATCAGTCAATCATTATGATTGTTTAGGTGGATTAATAAATTTATTTGATGGAAAAAGAAGAATTTTAGGAGTCATTGTTGATTATTGATTAATCATTATGAGTATCTTTTGTTTTTTGTGAAGTTGAGTGGCATGAAAAAGAAAATATTTGCCAGGACTTTCACTAGGGCTATACAATATTTGTACCAAATTTGTCTTCAAGGAGATGGAAACTTGTTCAGAAGCTAGTTCTGTATTCTCCTTGCATGCAATCAATGGTATATACACTGCTGTGC

mRNA sequence

GGGGGCATCACGAGTTGACGAGTCCTATTCTGTATTAGCAATTCACAGACGGTTGACGACGAGCCAAATTGGGCGGAGGAGCGAGAGCTTGAAAGACACAGAAATGGCGAATCGCACGATCAACTGCAAGACAGAAGTAGGGAAACCCCTTGTAGCTCTGATTTGCGGTTCGTTGGTTTATTACCATTGCGCCTATCGAAATTCCAGTCTCCTCTCCCTCGTTGCTGACGTTTTCATCGTTCTTCTTTGCTCTCTCGCCATTCTTGGCCTTCTCTTCCGCCATATGAATGTCTCGGTACCGGTGGACCCACTTGAGTGGCAAATATCGCAGGATACTGCTAATAGTATGATTGCTTGGTTAGCCAATACCATAGGTGCGGCTGAGTCTGTTCTGAGAGTGGCAGCAACAGGACATGACAAGAGGCTTTTTGTTAAGGTCGTTGTTTGCCTTTACGCCCTCTCAGTCCTTGGAAGATTGGTTTCAGGTGTTACAGTTGCCTACACTGGTCTATGCATGTTGTGTATATACATGGTGTTGGAGAATTCTGAGTCAATCGGTGCTTCTATTTCTCCTTTTCTTAGGAGAGGAAACGACCCTACTCCACACCAAGATACTATCTAATAATCTTCACTGGCTGTAACCCTGTTTTGTCACTGTAGATAGATACATCTGTGAATATTATCGTTAACAGAATCAGTCAATCATTATGATTGTTTAGGTGGATTAATAAATTTATTTGATGGAAAAAGAAGAATTTTAGGAGTCATTGTTGATTATTGATTAATCATTATGAGTATCTTTTGTTTTTTGTGAAGTTGAGTGGCATGAAAAAGAAAATATTTGCCAGGACTTTCACTAGGGCTATACAATATTTGTACCAAATTTGTCTTCAAGGAGATGGAAACTTGTTCAGAAGCTAGTTCTGTATTCTCCTTGCATGCAATCAATGGTATATACACTGCTGTGC

Coding sequence (CDS)

ATGGCGAATCGCACGATCAACTGCAAGACAGAAGTAGGGAAACCCCTTGTAGCTCTGATTTGCGGTTCGTTGGTTTATTACCATTGCGCCTATCGAAATTCCAGTCTCCTCTCCCTCGTTGCTGACGTTTTCATCGTTCTTCTTTGCTCTCTCGCCATTCTTGGCCTTCTCTTCCGCCATATGAATGTCTCGGTACCGGTGGACCCACTTGAGTGGCAAATATCGCAGGATACTGCTAATAGTATGATTGCTTGGTTAGCCAATACCATAGGTGCGGCTGAGTCTGTTCTGAGAGTGGCAGCAACAGGACATGACAAGAGGCTTTTTGTTAAGGTCGTTGTTTGCCTTTACGCCCTCTCAGTCCTTGGAAGATTGGTTTCAGGTGTTACAGTTGCCTACACTGGTCTATGCATGTTGTGTATATACATGGTGTTGGAGAATTCTGAGTCAATCGGTGCTTCTATTTCTCCTTTTCTTAGGAGAGGAAACGACCCTACTCCACACCAAGATACTATCTAA

Protein sequence

MANRTINCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESIGASISPFLRRGNDPTPHQDTI

Homology

[Close]

BLAST of Tan0022309 vs. ExPASy Swiss-Prot
Match: Q8GWH5 (Reticulon-like protein B22 OS=Arabidopsis thaliana OX=3702 GN=RTNLB22 PE=2 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 2.2e-56
Identity = 114/165 (69.09%), Postives = 137/165 (83.03%), Query Frame = 0


Query: 11  EVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPL 70
           E+GK +  LI G+LVYYHCAYRN++LLSL +DVFIVLLCSLAILGLLFR +NVSVPVDPL
Sbjct: 3   EMGKAMGLLISGTLVYYHCAYRNATLLSLFSDVFIVLLCSLAILGLLFRQLNVSVPVDPL 62

Query: 71  EWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVT 130
           EWQISQDTA++++A LANT+GAAE VLRVAATGHDKRLFVKVV+CLY LS LGRL+SGVT
Sbjct: 63  EWQISQDTASNIVARLANTVGAAEGVLRVAATGHDKRLFVKVVICLYFLSALGRLISGVT 122

Query: 131 VAYTGLCMLCIYMVLENSESIGASISPFLRRGN----DPTPHQDT 172
           VAY GLC+ C+ M+ + S+S+G  +   L+RGN    +   H DT
Sbjct: 123 VAYAGLCLFCLSMLCQTSQSLGNCV---LKRGNGQILEQEAHSDT 164

[Close]

BLAST of Tan0022309 vs. ExPASy Swiss-Prot
Match: P0C941 (Reticulon-like protein B23 OS=Arabidopsis thaliana OX=3702 GN=RTNLB23 PE=2 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.3e-50
Identity = 100/138 (72.46%), Postives = 122/138 (88.41%), Query Frame = 0


Query: 11  EVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPL 70
           E+GK +  LI G+LVY+HCA RN++LLSL++DV IVLL SLAILGLLFRH+NVSVPVDPL
Sbjct: 3   EMGKAIGLLISGTLVYHHCANRNATLLSLISDVLIVLLSSLAILGLLFRHLNVSVPVDPL 62

Query: 71  EWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVT 130
           EWQISQDTA +++A LANT+GAAESVLRVAATGHDKRLFVKVV+CLY L+ LGR++SGVT
Sbjct: 63  EWQISQDTACNIVARLANTVGAAESVLRVAATGHDKRLFVKVVICLYFLAALGRIISGVT 122

Query: 131 VAYTGLCMLCIYMVLENS 149
           +AY GLC+ C+ M+  +S
Sbjct: 123 IAYAGLCLFCLSMLFRSS 140

[Close]

BLAST of Tan0022309 vs. NCBI nr
Match: XP_038889154.1 (reticulon-like protein B22 [Benincasa hispida])

HSP 1 Score: 326.6 bits (836), Expect = 1.3e-85
Identity = 165/172 (95.93%), Postives = 168/172 (97.67%), Query Frame = 0


Query: 1   MANRTINCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 60
           MANRTINCKTEVGKP VALICGSL+YYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH
Sbjct: 16  MANRTINCKTEVGKPFVALICGSLIYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 75

Query: 61  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 120
           MNVSVPVDPLEWQISQDTANSM+AWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS
Sbjct: 76  MNVSVPVDPLEWQISQDTANSMVAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 135

Query: 121 VLGRLVSGVTVAYTGLCMLCIYMVLENSESIGASISPFLRRGNDPTPHQDTI 173
           VLGRLVSGVTVAYTGLCMLCIYMVLENSESI ASISPF+RRGNDPT HQD I
Sbjct: 136 VLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFIRRGNDPTSHQDAI 187

[Close]

BLAST of Tan0022309 vs. NCBI nr
Match: XP_022952032.1 (reticulon-like protein B22 isoform X1 [Cucurbita moschata] >XP_022973272.1 reticulon-like protein B22 isoform X1 [Cucurbita maxima] >XP_023536692.1 reticulon-like protein B22 isoform X1 [Cucurbita pepo subsp. pepo] >KAG6585840.1 Reticulon-like protein B22, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 317.8 bits (813), Expect = 5.9e-83
Identity = 163/172 (94.77%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 1   MANRTINCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 60
           MANR+I+CKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH
Sbjct: 16  MANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 75

Query: 61  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 120
           MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKV+V LYALS
Sbjct: 76  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVIVSLYALS 135

Query: 121 VLGRLVSGVTVAYTGLCMLCIYMVLENSESIGASISPFLRRGNDPTPHQDTI 173
           VLGRLVSGVTVAYTGLCMLCIYMVLENSESI A ISPFLRRGNDP  HQD+I
Sbjct: 136 VLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI 187

[Close]

BLAST of Tan0022309 vs. NCBI nr
Match: XP_008465703.1 (PREDICTED: reticulon-like protein B22 isoform X2 [Cucumis melo])

HSP 1 Score: 315.1 bits (806), Expect = 3.8e-82
Identity = 161/172 (93.60%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MANRTINCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 60
           MA+R+INCKTEVGKP VAL CGSLVYYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRH
Sbjct: 16  MASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRH 75

Query: 61  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 120
           MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS
Sbjct: 76  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 135

Query: 121 VLGRLVSGVTVAYTGLCMLCIYMVLENSESIGASISPFLRRGNDPTPHQDTI 173
           VLGRLVSGVTVAYTGLCMLCIYMVLENSESI A+ISPFLRRGN+ T HQD I
Sbjct: 136 VLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI 187

[Close]

BLAST of Tan0022309 vs. NCBI nr
Match: XP_011655303.1 (reticulon-like protein B22 [Cucumis sativus] >KGN51194.1 hypothetical protein Csa_009004 [Cucumis sativus])

HSP 1 Score: 313.9 bits (803), Expect = 8.4e-82
Identity = 160/172 (93.02%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MANRTINCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 60
           MA+R+INCKTEVGKP VALICGSLVYYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRH
Sbjct: 17  MASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRH 76

Query: 61  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 120
           MNVSVPVDPLEWQ+SQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS
Sbjct: 77  MNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 136

Query: 121 VLGRLVSGVTVAYTGLCMLCIYMVLENSESIGASISPFLRRGNDPTPHQDTI 173
           VLGRLVSGVTVAYTGLCMLCIYMVLENSESI A+ISP LRRGN+ T HQD I
Sbjct: 137 VLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNERTSHQDDI 188

[Close]

BLAST of Tan0022309 vs. NCBI nr
Match: XP_022150304.1 (reticulon-like protein B22 [Momordica charantia])

HSP 1 Score: 303.5 bits (776), Expect = 1.1e-78
Identity = 151/172 (87.79%), Postives = 162/172 (94.19%), Query Frame = 0


Query: 1   MANRTINCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 60
           MANRTI+  T++GKP+VALICGSLVYYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRH
Sbjct: 13  MANRTIHSTTQLGKPMVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRH 72

Query: 61  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 120
           MN+SVPVDPLEWQISQDTAN ++AWLANTIGAAESVLRVAATGHDKRLF+KVVVCLYALS
Sbjct: 73  MNISVPVDPLEWQISQDTANGLVAWLANTIGAAESVLRVAATGHDKRLFLKVVVCLYALS 132

Query: 121 VLGRLVSGVTVAYTGLCMLCIYMVLENSESIGASISPFLRRGNDPTPHQDTI 173
           VLGRLVSGVTVAYTGLCMLC+YMVLENSES   S+ PF RRGNDPT HQD I
Sbjct: 133 VLGRLVSGVTVAYTGLCMLCVYMVLENSESTSGSVFPFSRRGNDPTSHQDAI 184

[Close]

BLAST of Tan0022309 vs. ExPASy TrEMBL
Match: A0A6J1I734 (reticulon-like protein B22 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471842 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.8e-83
Identity = 163/172 (94.77%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 1   MANRTINCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 60
           MANR+I+CKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH
Sbjct: 16  MANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 75

Query: 61  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 120
           MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKV+V LYALS
Sbjct: 76  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVIVSLYALS 135

Query: 121 VLGRLVSGVTVAYTGLCMLCIYMVLENSESIGASISPFLRRGNDPTPHQDTI 173
           VLGRLVSGVTVAYTGLCMLCIYMVLENSESI A ISPFLRRGNDP  HQD+I
Sbjct: 136 VLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI 187

[Close]

BLAST of Tan0022309 vs. ExPASy TrEMBL
Match: A0A6J1GJ96 (reticulon-like protein B22 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454742 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.8e-83
Identity = 163/172 (94.77%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 1   MANRTINCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 60
           MANR+I+CKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH
Sbjct: 16  MANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 75

Query: 61  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 120
           MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKV+V LYALS
Sbjct: 76  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVIVSLYALS 135

Query: 121 VLGRLVSGVTVAYTGLCMLCIYMVLENSESIGASISPFLRRGNDPTPHQDTI 173
           VLGRLVSGVTVAYTGLCMLCIYMVLENSESI A ISPFLRRGNDP  HQD+I
Sbjct: 136 VLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI 187

[Close]

BLAST of Tan0022309 vs. ExPASy TrEMBL
Match: A0A1S3CPH6 (reticulon-like protein B22 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503325 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.8e-82
Identity = 161/172 (93.60%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MANRTINCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 60
           MA+R+INCKTEVGKP VAL CGSLVYYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRH
Sbjct: 16  MASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRH 75

Query: 61  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 120
           MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS
Sbjct: 76  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 135

Query: 121 VLGRLVSGVTVAYTGLCMLCIYMVLENSESIGASISPFLRRGNDPTPHQDTI 173
           VLGRLVSGVTVAYTGLCMLCIYMVLENSESI A+ISPFLRRGN+ T HQD I
Sbjct: 136 VLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI 187

[Close]

BLAST of Tan0022309 vs. ExPASy TrEMBL
Match: A0A0A0KQM7 (Reticulon domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G487710 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.1e-82
Identity = 160/172 (93.02%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MANRTINCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 60
           MA+R+INCKTEVGKP VALICGSLVYYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRH
Sbjct: 17  MASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRH 76

Query: 61  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 120
           MNVSVPVDPLEWQ+SQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS
Sbjct: 77  MNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 136

Query: 121 VLGRLVSGVTVAYTGLCMLCIYMVLENSESIGASISPFLRRGNDPTPHQDTI 173
           VLGRLVSGVTVAYTGLCMLCIYMVLENSESI A+ISP LRRGN+ T HQD I
Sbjct: 137 VLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNERTSHQDDI 188

[Close]

BLAST of Tan0022309 vs. ExPASy TrEMBL
Match: A0A6J1D9M0 (reticulon-like protein B22 OS=Momordica charantia OX=3673 GN=LOC111018504 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 5.5e-79
Identity = 151/172 (87.79%), Postives = 162/172 (94.19%), Query Frame = 0


Query: 1   MANRTINCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 60
           MANRTI+  T++GKP+VALICGSLVYYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRH
Sbjct: 13  MANRTIHSTTQLGKPMVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRH 72

Query: 61  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 120
           MN+SVPVDPLEWQISQDTAN ++AWLANTIGAAESVLRVAATGHDKRLF+KVVVCLYALS
Sbjct: 73  MNISVPVDPLEWQISQDTANGLVAWLANTIGAAESVLRVAATGHDKRLFLKVVVCLYALS 132

Query: 121 VLGRLVSGVTVAYTGLCMLCIYMVLENSESIGASISPFLRRGNDPTPHQDTI 173
           VLGRLVSGVTVAYTGLCMLC+YMVLENSES   S+ PF RRGNDPT HQD I
Sbjct: 133 VLGRLVSGVTVAYTGLCMLCVYMVLENSESTSGSVFPFSRRGNDPTSHQDAI 184

[Close]

BLAST of Tan0022309 vs. TAIR 10
Match: AT1G78895.1 (Reticulon family protein )

HSP 1 Score: 219.9 bits (559), Expect = 1.5e-57
Identity = 114/165 (69.09%), Postives = 137/165 (83.03%), Query Frame = 0


Query: 11  EVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPL 70
           E+GK +  LI G+LVYYHCAYRN++LLSL +DVFIVLLCSLAILGLLFR +NVSVPVDPL
Sbjct: 3   EMGKAMGLLISGTLVYYHCAYRNATLLSLFSDVFIVLLCSLAILGLLFRQLNVSVPVDPL 62

Query: 71  EWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVT 130
           EWQISQDTA++++A LANT+GAAE VLRVAATGHDKRLFVKVV+CLY LS LGRL+SGVT
Sbjct: 63  EWQISQDTASNIVARLANTVGAAEGVLRVAATGHDKRLFVKVVICLYFLSALGRLISGVT 122

Query: 131 VAYTGLCMLCIYMVLENSESIGASISPFLRRGN----DPTPHQDT 172
           VAY GLC+ C+ M+ + S+S+G  +   L+RGN    +   H DT
Sbjct: 123 VAYAGLCLFCLSMLCQTSQSLGNCV---LKRGNGQILEQEAHSDT 164

[Close]

BLAST of Tan0022309 vs. TAIR 10
Match: AT1G16825.1 (Reticulon family protein )

HSP 1 Score: 199.9 bits (507), Expect = 1.7e-51
Identity = 100/138 (72.46%), Postives = 122/138 (88.41%), Query Frame = 0


Query: 11  EVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPL 70
           E+GK +  LI G+LVY+HCA RN++LLSL++DV IVLL SLAILGLLFRH+NVSVPVDPL
Sbjct: 3   EMGKAIGLLISGTLVYHHCANRNATLLSLISDVLIVLLSSLAILGLLFRHLNVSVPVDPL 62

Query: 71  EWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVT 130
           EWQISQDTA +++A LANT+GAAESVLRVAATGHDKRLFVKVV+CLY L+ LGR++SGVT
Sbjct: 63  EWQISQDTACNIVARLANTVGAAESVLRVAATGHDKRLFVKVVICLYFLAALGRIISGVT 122

Query: 131 VAYTGLCMLCIYMVLENS 149
           +AY GLC+ C+ M+  +S
Sbjct: 123 IAYAGLCLFCLSMLFRSS 140

The following BLAST results are available for this feature:

BLAST of Tan0022309 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWH5	2.2e-56	69.09	Reticulon-like protein B22 OS=Arabidopsis thaliana OX=3702 GN=RTNLB22 PE=2 SV=1	[more]
P0C941	2.3e-50	72.46	Reticulon-like protein B23 OS=Arabidopsis thaliana OX=3702 GN=RTNLB23 PE=2 SV=1	[more]

BLAST of Tan0022309 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889154.1	1.3e-85	95.93	reticulon-like protein B22 [Benincasa hispida]	[more]
XP_022952032.1	5.9e-83	94.77	reticulon-like protein B22 isoform X1 [Cucurbita moschata] >XP_022973272.1 retic...	[more]
XP_008465703.1	3.8e-82	93.60	PREDICTED: reticulon-like protein B22 isoform X2 [Cucumis melo]	[more]
XP_011655303.1	8.4e-82	93.02	reticulon-like protein B22 [Cucumis sativus] >KGN51194.1 hypothetical protein Cs...	[more]
XP_022150304.1	1.1e-78	87.79	reticulon-like protein B22 [Momordica charantia]	[more]

BLAST of Tan0022309 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I734	2.8e-83	94.77	reticulon-like protein B22 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11147184...	[more]
A0A6J1GJ96	2.8e-83	94.77	reticulon-like protein B22 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454...	[more]
A0A1S3CPH6	1.8e-82	93.60	reticulon-like protein B22 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503325 PE...	[more]
A0A0A0KQM7	4.1e-82	93.02	Reticulon domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G487710 P...	[more]
A0A6J1D9M0	5.5e-79	87.79	reticulon-like protein B22 OS=Momordica charantia OX=3673 GN=LOC111018504 PE=4 S...	[more]

BLAST of Tan0022309 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78895.1	1.5e-57	69.09	Reticulon family protein	[more]
AT1G16825.1	1.7e-51	72.46	Reticulon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 17..134 e-value: 1.1E-15 score: 57.9
IPR044177	Reticulon-like protein B22/B23	PANTHER	PTHR47879	RETICULON-LIKE PROTEIN B22	coord: 5..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0022309.1	Tan0022309.1	mRNA
Tan0022309.2	Tan0022309.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane