Tan0022270 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCATGCTGCTTCATGTTTTGCAGATGAACCCAACAATAAGGCTCCTGAAAGGCCCTCTTTTGGAGGTTTCATTCAGCAAACACTTGCTGTTTTGAAGAAACCTCATCCCACTCATTGGGACAAGATCAAAAGTCTCCTTCGCCAATTTCAGTTGCAGTTTTTTCCTCCTAATTTAGAGTAATTTTCCTTCCCTTTAAATCTTCCATGCATTTGATTCCTGCTATTTTATCTCCTTTTTTCCATTAAATTTTGTCCTCCATCTCCACCGATGGATGATTATTCTATTTTGGTTCTTAACCTTTTTATTATCTATTTTTTCATGGATAGATTTTTCGTGTGAAAAAAGATGGTTTGAAGATACATCCAATGACTCAAATGCCTATTTTTTTATGGATAGATTTATAGGTAAAGACTAAAGTAAACGTTGAGGTGATGTTTGATAATCATTTTTTTTTTATTTTTGAAAATTATGCTTGTTTTCTCATTCATTATTTCATTTTTATTTTTTATTTTTTGAGGAATTTTTTTTACTCTTAGCCAAATTCTAAAACACAAAACAAGTTTTTAAAAACAATAGTGTCATTTGATAACCATTTGATTTTTTAAAACTATACTTGTTTTCTCCTCCATCCTCTACCATGAGTTTCATCATTCTTAACAAAACATTTGAATTCTTATCCAAATTTCAAAAAACACAAAATAAGATTTTGAAAACTACTTAAAAGTGGTTATCAAAATAAGGAATCCATAGAAAAAAACAAAACAAAAAAAACAGTTATAGTGGTATTAAAATAAGGAATGAATGCATAGAGGAAAGTAGTATTTATAGACTTAATTTTCAAAAAAAAAAAAAAAAAAGAAGCCCAAATGATTATCAAATGCGGTCTATTTCTTTTAGTTTTCTAAATTGGACATGGATTTTGAAAACATTTCTAAAATATAGATAACAAAACAAAACAATTCATACTTAAAAGTAGTGTATATAAGCTTAAATTTCAAAAATCAAATGATTATCAAATGAAATCTTAAAACTTTAAAGATAAAAAAAAAAAATGCATATGAAAGTTTAGAAACCAAAATAAGATTCAAACGAGCATAATTGTTCGGTTGGGTTTGTGAGTGGATGATTTGTGTTTTGCAGTTTTAGGAGTAGAGATGAAGCAAAAGGTGAACAGGGTGTGGTTGATGATATGAAAGAAGCAGTAGAGAGGAGCTTTGGAGCAAGCAAAGATGCAGTTGAGGAATCTGCTAAATCTGCAGCAAAAGTCATGGAGGAAGCAGTGGACAAGGTCAAAGAGAATCTCGTCGACAAGGACAAGGACAAAGACAAAGACAAGAACCAACATTCTCATGATGAGCTTTGA ATGCTTCATGCTGCTTCATGTTTTGCAGATGAACCCAACAATAAGGCTCCTGAAAGGCCCTCTTTTGGAGGTTTCATTCAGCAAACACTTGCTGTTTTGAAGAAACCTCATCCCACTCATTGGGACAAGATCAAAAGTCTCCTTCGCCAATTTCAGTTGCAGTTTTTTCCTCCTAATTTAGATTTTAGGAGTAGAGATGAAGCAAAAGGTGAACAGGGTGTGGTTGATGATATGAAAGAAGCAGTAGAGAGGAGCTTTGGAGCAAGCAAAGATGCAGTTGAGGAATCTGCTAAATCTGCAGCAAAAGTCATGGAGGAAGCAGTGGACAAGGTCAAAGAGAATCTCGTCGACAAGGACAAGGACAAAGACAAAGACAAGAACCAACATTCTCATGATGAGCTTTGA ATGCTTCATGCTGCTTCATGTTTTGCAGATGAACCCAACAATAAGGCTCCTGAAAGGCCCTCTTTTGGAGGTTTCATTCAGCAAACACTTGCTGTTTTGAAGAAACCTCATCCCACTCATTGGGACAAGATCAAAAGTCTCCTTCGCCAATTTCAGTTGCAGTTTTTTCCTCCTAATTTAGATTTTAGGAGTAGAGATGAAGCAAAAGGTGAACAGGGTGTGGTTGATGATATGAAAGAAGCAGTAGAGAGGAGCTTTGGAGCAAGCAAAGATGCAGTTGAGGAATCTGCTAAATCTGCAGCAAAAGTCATGGAGGAAGCAGTGGACAAGGTCAAAGAGAATCTCGTCGACAAGGACAAGGACAAAGACAAAGACAAGAACCAACATTCTCATGATGAGCTTTGA MLHAASCFADEPNNKAPERPSFGGFIQQTLAVLKKPHPTHWDKIKSLLRQFQLQFFPPNLDFRSRDEAKGEQGVVDDMKEAVERSFGASKDAVEESAKSAAKVMEEAVDKVKENLVDKDKDKDKDKNQHSHDEL Homology
BLAST of Tan0022270 vs. NCBI nr
Match: XP_022977956.1 (uncharacterized protein LOC111478091 [Cucurbita maxima]) HSP 1 Score: 201.8 bits (512), Expect = 3.6e-48 Identity = 108/134 (80.60%), Postives = 120/134 (89.55%), Query Frame = 0
BLAST of Tan0022270 vs. NCBI nr
Match: KAG6604241.1 (hypothetical protein SDJN03_04850, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 196.8 bits (499), Expect = 1.2e-46 Identity = 108/134 (80.60%), Postives = 118/134 (88.06%), Query Frame = 0
BLAST of Tan0022270 vs. NCBI nr
Match: XP_022950287.1 (uncharacterized protein LOC111453420 [Cucurbita moschata]) HSP 1 Score: 196.8 bits (499), Expect = 1.2e-46 Identity = 108/134 (80.60%), Postives = 118/134 (88.06%), Query Frame = 0
BLAST of Tan0022270 vs. NCBI nr
Match: KAG7034399.1 (hypothetical protein SDJN02_04127 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 195.3 bits (495), Expect = 3.4e-46 Identity = 107/134 (79.85%), Postives = 118/134 (88.06%), Query Frame = 0
BLAST of Tan0022270 vs. NCBI nr
Match: XP_023544688.1 (uncharacterized protein LOC111804199 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 194.1 bits (492), Expect = 7.6e-46 Identity = 107/134 (79.85%), Postives = 116/134 (86.57%), Query Frame = 0
BLAST of Tan0022270 vs. ExPASy TrEMBL
Match: A0A6J1ILF3 (uncharacterized protein LOC111478091 OS=Cucurbita maxima OX=3661 GN=LOC111478091 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 1.8e-48 Identity = 108/134 (80.60%), Postives = 120/134 (89.55%), Query Frame = 0
BLAST of Tan0022270 vs. ExPASy TrEMBL
Match: A0A6J1GEE2 (uncharacterized protein LOC111453420 OS=Cucurbita moschata OX=3662 GN=LOC111453420 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 5.7e-47 Identity = 108/134 (80.60%), Postives = 118/134 (88.06%), Query Frame = 0
BLAST of Tan0022270 vs. ExPASy TrEMBL
Match: A0A0A0KFX9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487000 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 2.3e-40 Identity = 98/134 (73.13%), Postives = 110/134 (82.09%), Query Frame = 0
BLAST of Tan0022270 vs. ExPASy TrEMBL
Match: A0A5D3CLZ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005640 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.6e-39 Identity = 96/134 (71.64%), Postives = 109/134 (81.34%), Query Frame = 0
BLAST of Tan0022270 vs. ExPASy TrEMBL
Match: A0A6J1BUN4 (uncharacterized protein LOC111005870 OS=Momordica charantia OX=3673 GN=LOC111005870 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.6e-39 Identity = 96/134 (71.64%), Postives = 104/134 (77.61%), Query Frame = 0
BLAST of Tan0022270 vs. TAIR 10
Match: AT1G16850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, leaf whorl, male gametophyte, flower, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64820.1); Has 24 Blast hits to 24 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 59.3 bits (142), Expect = 2.7e-09 Identity = 34/86 (39.53%), Postives = 52/86 (60.47%), Query Frame = 0
BLAST of Tan0022270 vs. TAIR 10
Match: AT5G64820.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 58.9 bits (141), Expect = 3.6e-09 Identity = 43/122 (35.25%), Postives = 61/122 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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