Tan0022248 (gene) Snake gourd v1

Overview
NameTan0022248
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Description60S ribosomal protein L22
LocationLG09: 9512230 .. 9514359 (+)
RNA-Seq ExpressionTan0022248
SyntenyTan0022248
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCAAATGAAATTTAAATGGGCCATTTCGTTTTATAAACCCTAGGTCATCCATTATATTTTCGTTTAGAACCCTAGGTCATTGGGCGGCCGTAAGCCTCAACTTCTCTGCAGCAACTGGTATTCTCTCTTCCTCTTGGTATATTGCTACCATTGATCTGAAACAGTCGTTTTTAGGCATCAATACATTAGGGTTTCCTTCTGATTGCAGAGATTTTTGATCGAAAATGAGTCGAGGAGGTGCAGCCGGCCCCAAGGGAAGAAGAAGGAGTAACCTTCACAATCGACTGTTCGAAGCCAGTGGAAGATAAGATTATGGACATTGCTTCTCTGGAGAAGTTTCTTCTGGAGAGGATTAAAGTCGGAGGCAAGGCTGGAGCTCTTGGCGATGCCGTCTCTGTTACCCGTGAGAAGAGTAAAATTACCGTCACTTCTGACAGTAATTTCTCCAAGAGGTTATAAGTCTTTTTCCTTCCATTTGAATCATTGGTTTGTTCTGAATCCAATTTCATTTCGGAAGGTATATTTTGAATGTGGTTTATGGGTTCGAGTATAAATAATGAAAAGGAGTCGCAAGGTTGAAGGTTAGTGTTTTGAATTTTACAAATATGAGTTATTCTTTTAAAGTTGTATTTGTATTTTTGATTTGTTATAGTATGGGGAAAATTAGGTTTGTTATGTTTGATGTTTGTTCTGTATATTAAAAATGATTGAATGTACTGTATTCCAATTGTAGAATTCTGAGAGTCACATGAGGGCTGAATGATTGGTATTAAAATCAGGCTTGTTATGTTTGGTTTTTGTTCTATATGATGAAATGGATTGAATGAACTAAATTCCGTTTGTAGAATTCTGAGAGTCGATTTGAGGGCTGTTTTGATTTACCATTACATCGCGTTGAGAGTTATGATTATAAGATTTCTGGACGGTTTTCTATTCAACTAATTCTGAAGTTTTGGTTAAAATAGGTTATATTGGAGAATTTCTTAGTACTTTGAGAGTTCCCCACGACTCTCCTATCAGAAAGGCAACACTAGCAATTTAATTATTTGGATTGTAACCTGAACCTAGTGAGCTTGTTAATGTTTATTTAATGTTCTTATTGCATAGGTTTGTTTATGAATATGAGTAAAAAATAGATATAGAATACTGTGCTAGTGATTTGTTCTTTAGGATCAATTGATCAGCTTAATTTGCTTTTTTTTTTTCTGTCAAAGTATTAATGTTGCCATATACTTCTAATGATTTATTATTTGGGATTGATTTTGTTATTTAGCTTATTTCCTTCCTCCCCTTCCCAAAGCAATGTGGTCTTTTCTAAGTAAGCGTAATTCTATCATAGTATTGACACGGTTCATGGAGTTGATTGTTGTGGACTGACTGATATATTTATGTCTAGGTTCCTTCTTTTAATTATATTTCCATTCCAACACAGAATGATGCAGGAACTTCTTTATGATACTGATATAAATTATAATAGTTCAGAAATCACAACACAACCTATTTATTCATCGGTGATGTTGGTGATGTTTGATAGCTCGGGCAGTCGTAGAAATTTAATATCTGAATTGCATTAGTTTCTCCATTTGTTCTTCTGAGATTTAGCATTACCCCATAATGCCCTGGAGATCGTTGCTGAACTCGGTTTCTTTTAAAACTTGTTTTTGGTAAGGAAAATGAACTATGACTTATTTTTATCTTGTGTCTGGCTGGTTAGGTATTTGAAGTACTTGACTAAGAAGTACCTGAAGAAACACAATGTGCGGGATTGGCTACGAGTGATCGCTGCCAACAAAGATAGGAATGTTTACGAACTCAGGTACTTCAACATTGCCGAAAACGAGGGAGAGGAAGAGGATTAAATTTATCAATTTAGACATTGCATTCAAGGAACAAGTGTTATGTCGCTGGAATCTCTCACTGTTTTTGTTACTAGTGTTGCTTGTGTGATGCTCTATTTTTATTTGAACTAATGCAGTTTAGCAATTTTGTTTTCTTTGACAGACTTAGAATGCTGTTATTTTTCTTGTGTCATATTTGATTAAGACCAACAATTTTTCACTTAAAATCATCAATGTTTCACATATCTTATGAAATCAAGGTGGATGAAAATATTTATATTTGTCTAAAA

mRNA sequence

CTCCAAATGAAATTTAAATGGGCCATTTCGTTTTATAAACCCTAGGTCATCCATTATATTTTCGTTTAGAACCCTAGGTCATTGGGCGGCCGTAAGCCTCAACTTCTCTGCAGCAACTGGTATTCTCTCTTCCTCTTGGTATATTGCTACCATTGATCTGAAACAGTCGTTTTTAGGCATCAATACATTAGGGTTTCCTTCTGATTGCAGAGATTTTTGATCGAAAATGAGTCGAGGAGGTGCAGCCGGCCCCAAGGGAAGAAGAAGGAGTAACCTTCACAATCGACTGTTCGAAGCCAGTGGAAGATAAGATTATGGACATTGCTTCTCTGGAGAAGTTTCTTCTGGAGAGGATTAAAGTCGGAGGCAAGGCTGGAGCTCTTGGCGATGCCGTCTCTGTTACCCGTGAGAAGAGTAAAATTACCGTCACTTCTGACAGTAATTTCTCCAAGAGGTATTTGAAGTACTTGACTAAGAAGTACCTGAAGAAACACAATGTGCGGGATTGGCTACGAGTGATCGCTGCCAACAAAGATAGGAATGTTTACGAACTCAGGTACTTCAACATTGCCGAAAACGAGGGAGAGGAAGAGGATTAAATTTATCAATTTAGACATTGCATTCAAGGAACAAGTGTTATGTCGCTGGAATCTCTCACTGTTTTTGTTACTAGTGTTGCTTGTGTGATGCTCTATTTTTATTTGAACTAATGCAGTTTAGCAATTTTGTTTTCTTTGACAGACTTAGAATGCTGTTATTTTTCTTGTGTCATATTTGATTAAGACCAACAATTTTTCACTTAAAATCATCAATGTTTCACATATCTTATGAAATCAAGGTGGATGAAAATATTTATATTTGTCTAAAA

Coding sequence (CDS)

ATGGACATTGCTTCTCTGGAGAAGTTTCTTCTGGAGAGGATTAAAGTCGGAGGCAAGGCTGGAGCTCTTGGCGATGCCGTCTCTGTTACCCGTGAGAAGAGTAAAATTACCGTCACTTCTGACAGTAATTTCTCCAAGAGGTATTTGAAGTACTTGACTAAGAAGTACCTGAAGAAACACAATGTGCGGGATTGGCTACGAGTGATCGCTGCCAACAAAGATAGGAATGTTTACGAACTCAGGTACTTCAACATTGCCGAAAACGAGGGAGAGGAAGAGGATTAA

Protein sequence

MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
Homology
[Close]
BLAST of Tan0022248 vs. ExPASy Swiss-Prot
Match: Q9M9W1 (60S ribosomal protein L22-2 OS=Arabidopsis thaliana OX=3702 GN=RPL22B PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.8e-41
Identity = 85/94 (90.43%), Postives = 91/94 (96.81%), Query Frame = 0 

Query: 1   MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 60
           M+IASLEKFL ERIKVGGKAGALGD+V++TREKSKITVT+D  FSKRYLKYLTKKYLKKH
Sbjct: 31  MEIASLEKFLQERIKVGGKAGALGDSVTITREKSKITVTADGQFSKRYLKYLTKKYLKKH 90

Query: 61  NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 95
           NVRDWLRVIAANKDRN+YELRYFNIAENEGEEED
Sbjct: 91  NVRDWLRVIAANKDRNLYELRYFNIAENEGEEED 124

[Close]
BLAST of Tan0022248 vs. ExPASy Swiss-Prot
Match: Q9FE58 (60S ribosomal protein L22-3 OS=Arabidopsis thaliana OX=3702 GN=RPL22C PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 4.1e-41
Identity = 85/94 (90.43%), Postives = 90/94 (95.74%), Query Frame = 0 

Query: 1   MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 60
           M+IASLEKFL ERIKVGGKAGALGD+VS+TREKSKITVT+D  FSKRYLKYLTKKYLKKH
Sbjct: 31  MEIASLEKFLQERIKVGGKAGALGDSVSITREKSKITVTADGQFSKRYLKYLTKKYLKKH 90

Query: 61  NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 95
           NVRDWLRVIAANKDRN+YELRYFNIAENE EEED
Sbjct: 91  NVRDWLRVIAANKDRNLYELRYFNIAENEAEEED 124

[Close]
BLAST of Tan0022248 vs. ExPASy Swiss-Prot
Match: Q9SRX7 (Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana OX=3702 GN=RPL22A PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.2e-29
Identity = 65/94 (69.15%), Postives = 80/94 (85.11%), Query Frame = 0 

Query: 1   MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 60
           ++IA+LEKFL ERIKV GKAGALG++VS+TR   KI V ++SNFSKRYLKYLTKKYLKK+
Sbjct: 33  LEIATLEKFLQERIKVRGKAGALGNSVSITRYNGKINVNANSNFSKRYLKYLTKKYLKKY 92

Query: 61  NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 95
           N+RDWLRVIA+NKD+NVYE+RYF I +     E+
Sbjct: 93  NLRDWLRVIASNKDKNVYEVRYFRIDDEVASYEE 126

[Close]
BLAST of Tan0022248 vs. ExPASy Swiss-Prot
Match: Q90YU6 (60S ribosomal protein L22 OS=Ictalurus punctatus OX=7998 GN=rpl22 PE=2 SV=3)

HSP 1 Score: 117.9 bits (294), Expect = 6.4e-26
Identity = 66/95 (69.47%), Postives = 75/95 (78.95%), Query Frame = 0 

Query: 1   MDIASLEKFLLERIKVGGKAGAL-GDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKK 60
           MD A+ E+FL ERIKV GKAG L G  VS+ R KSKITVTSD  FSKRYLKYLTKKYLKK
Sbjct: 34  MDAANFEQFLQERIKVNGKAGNLGGGVVSIERSKSKITVTSDIPFSKRYLKYLTKKYLKK 93

Query: 61  HNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 95
           +N+RDWLRV+A  K+   YELRYF I ++E EEED
Sbjct: 94  NNLRDWLRVVANTKES--YELRYFQINQDEEEEED 126

[Close]
BLAST of Tan0022248 vs. ExPASy Swiss-Prot
Match: P47198 (60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 1.9e-25
Identity = 64/95 (67.37%), Postives = 76/95 (80.00%), Query Frame = 0 

Query: 1   MDIASLEKFLLERIKVGGKAGAL-GDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKK 60
           MD A+ E+FL ERIKV GKAG L G  V++ R KSKITVTS+  FSKRYLKYLTKKYLKK
Sbjct: 34  MDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEEPFSKRYLKYLTKKYLKK 93

Query: 61  HNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 95
           +N+RDWLRV+A +K+   YELRYF I ++E EEED
Sbjct: 94  NNLRDWLRVVANSKES--YELRYFQINQDEEEEED 126

[Close]
BLAST of Tan0022248 vs. NCBI nr
Match: KAG6590443.1 (60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 182.2 bits (461), Expect = 2.1e-42
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1   MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 60
           MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH
Sbjct: 67  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 126

Query: 61  NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 95
           NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
Sbjct: 127 NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 160

[Close]
BLAST of Tan0022248 vs. NCBI nr
Match: XP_022146066.1 (60S ribosomal protein L22-2 [Momordica charantia] >XP_022933854.1 60S ribosomal protein L22-2 [Cucurbita moschata] >XP_022970154.1 60S ribosomal protein L22-2 [Cucurbita maxima] >XP_023530293.1 60S ribosomal protein L22-2 [Cucurbita pepo subsp. pepo] >XP_038880642.1 60S ribosomal protein L22-2 [Benincasa hispida])

HSP 1 Score: 182.2 bits (461), Expect = 2.1e-42
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1   MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 60
           MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH
Sbjct: 31  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 90

Query: 61  NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 95
           NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
Sbjct: 91  NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 124

[Close]
BLAST of Tan0022248 vs. NCBI nr
Match: KAG6588488.1 (60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 182.2 bits (461), Expect = 2.1e-42
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1   MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 60
           MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH
Sbjct: 85  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 144

Query: 61  NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 95
           NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
Sbjct: 145 NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 178

[Close]
BLAST of Tan0022248 vs. NCBI nr
Match: XP_022961443.1 (60S ribosomal protein L22-2-like [Cucurbita moschata] >XP_022968816.1 60S ribosomal protein L22-2-like [Cucurbita maxima] >XP_023515962.1 60S ribosomal protein L22-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 182.2 bits (461), Expect = 2.1e-42
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1   MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 60
           MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH
Sbjct: 31  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 90

Query: 61  NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 95
           NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
Sbjct: 91  NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 124

[Close]
BLAST of Tan0022248 vs. NCBI nr
Match: XP_004135607.1 (60S ribosomal protein L22-2 [Cucumis sativus] >XP_008450627.1 PREDICTED: 60S ribosomal protein L22-2 [Cucumis melo] >KAA0050904.1 60S ribosomal protein L22-2 [Cucumis melo var. makuwa] >KAE8653365.1 hypothetical protein Csa_007558 [Cucumis sativus] >TYK10255.1 60S ribosomal protein L22-2 [Cucumis melo var. makuwa])

HSP 1 Score: 181.0 bits (458), Expect = 4.7e-42
Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1   MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 60
           MDIASLEKFLLERIKVGGKAGALGD+VSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH
Sbjct: 31  MDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 90

Query: 61  NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 95
           NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
Sbjct: 91  NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 124

[Close]
BLAST of Tan0022248 vs. ExPASy TrEMBL
Match: A0A6J1I4P7 (60S ribosomal protein L22-2 OS=Cucurbita maxima OX=3661 GN=LOC111469134 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.0e-42
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1   MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 60
           MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH
Sbjct: 31  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 90

Query: 61  NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 95
           NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
Sbjct: 91  NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 124

[Close]
BLAST of Tan0022248 vs. ExPASy TrEMBL
Match: A0A6J1HVX5 (60S ribosomal protein L22-2-like OS=Cucurbita maxima OX=3661 GN=LOC111467939 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.0e-42
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1   MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 60
           MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH
Sbjct: 31  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 90

Query: 61  NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 95
           NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
Sbjct: 91  NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 124

[Close]
BLAST of Tan0022248 vs. ExPASy TrEMBL
Match: A0A6J1CY92 (60S ribosomal protein L22-2 OS=Momordica charantia OX=3673 GN=LOC111015359 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.0e-42
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1   MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 60
           MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH
Sbjct: 31  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 90

Query: 61  NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 95
           NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
Sbjct: 91  NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 124

[Close]
BLAST of Tan0022248 vs. ExPASy TrEMBL
Match: A0A6J1HBU5 (60S ribosomal protein L22-2-like OS=Cucurbita moschata OX=3662 GN=LOC111462024 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.0e-42
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1   MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 60
           MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH
Sbjct: 31  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 90

Query: 61  NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 95
           NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
Sbjct: 91  NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 124

[Close]
BLAST of Tan0022248 vs. ExPASy TrEMBL
Match: A0A6J1F0W8 (60S ribosomal protein L22-2 OS=Cucurbita moschata OX=3662 GN=LOC111441145 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.0e-42
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1   MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 60
           MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH
Sbjct: 31  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 90

Query: 61  NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 95
           NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
Sbjct: 91  NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 124

[Close]
BLAST of Tan0022248 vs. TAIR 10
Match: AT3G05560.1 (Ribosomal L22e protein family )

HSP 1 Score: 169.5 bits (428), Expect = 1.3e-42
Identity = 85/94 (90.43%), Postives = 91/94 (96.81%), Query Frame = 0 

Query: 1   MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 60
           M+IASLEKFL ERIKVGGKAGALGD+V++TREKSKITVT+D  FSKRYLKYLTKKYLKKH
Sbjct: 31  MEIASLEKFLQERIKVGGKAGALGDSVTITREKSKITVTADGQFSKRYLKYLTKKYLKKH 90

Query: 61  NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 95
           NVRDWLRVIAANKDRN+YELRYFNIAENEGEEED
Sbjct: 91  NVRDWLRVIAANKDRNLYELRYFNIAENEGEEED 124

[Close]
BLAST of Tan0022248 vs. TAIR 10
Match: AT3G05560.2 (Ribosomal L22e protein family )

HSP 1 Score: 169.5 bits (428), Expect = 1.3e-42
Identity = 85/94 (90.43%), Postives = 91/94 (96.81%), Query Frame = 0 

Query: 1   MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 60
           M+IASLEKFL ERIKVGGKAGALGD+V++TREKSKITVT+D  FSKRYLKYLTKKYLKKH
Sbjct: 31  MEIASLEKFLQERIKVGGKAGALGDSVTITREKSKITVTADGQFSKRYLKYLTKKYLKKH 90

Query: 61  NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 95
           NVRDWLRVIAANKDRN+YELRYFNIAENEGEEED
Sbjct: 91  NVRDWLRVIAANKDRNLYELRYFNIAENEGEEED 124

[Close]
BLAST of Tan0022248 vs. TAIR 10
Match: AT3G05560.3 (Ribosomal L22e protein family )

HSP 1 Score: 169.5 bits (428), Expect = 1.3e-42
Identity = 85/94 (90.43%), Postives = 91/94 (96.81%), Query Frame = 0 

Query: 1   MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 60
           M+IASLEKFL ERIKVGGKAGALGD+V++TREKSKITVT+D  FSKRYLKYLTKKYLKKH
Sbjct: 31  MEIASLEKFLQERIKVGGKAGALGDSVTITREKSKITVTADGQFSKRYLKYLTKKYLKKH 90

Query: 61  NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 95
           NVRDWLRVIAANKDRN+YELRYFNIAENEGEEED
Sbjct: 91  NVRDWLRVIAANKDRNLYELRYFNIAENEGEEED 124

[Close]
BLAST of Tan0022248 vs. TAIR 10
Match: AT5G27770.1 (Ribosomal L22e protein family )

HSP 1 Score: 168.3 bits (425), Expect = 2.9e-42
Identity = 85/94 (90.43%), Postives = 90/94 (95.74%), Query Frame = 0 

Query: 1   MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 60
           M+IASLEKFL ERIKVGGKAGALGD+VS+TREKSKITVT+D  FSKRYLKYLTKKYLKKH
Sbjct: 31  MEIASLEKFLQERIKVGGKAGALGDSVSITREKSKITVTADGQFSKRYLKYLTKKYLKKH 90

Query: 61  NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 95
           NVRDWLRVIAANKDRN+YELRYFNIAENE EEED
Sbjct: 91  NVRDWLRVIAANKDRNLYELRYFNIAENEAEEED 124

[Close]
BLAST of Tan0022248 vs. TAIR 10
Match: AT1G02830.1 (Ribosomal L22e protein family )

HSP 1 Score: 130.2 bits (326), Expect = 8.8e-31
Identity = 65/94 (69.15%), Postives = 80/94 (85.11%), Query Frame = 0 

Query: 1   MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKH 60
           ++IA+LEKFL ERIKV GKAGALG++VS+TR   KI V ++SNFSKRYLKYLTKKYLKK+
Sbjct: 33  LEIATLEKFLQERIKVRGKAGALGNSVSITRYNGKINVNANSNFSKRYLKYLTKKYLKKY 92

Query: 61  NVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 95
           N+RDWLRVIA+NKD+NVYE+RYF I +     E+
Sbjct: 93  NLRDWLRVIASNKDKNVYEVRYFRIDDEVASYEE 126

The following BLAST results are available for this feature:
BLAST of Tan0022248 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M9W11.8e-4190.4360S ribosomal protein L22-2 OS=Arabidopsis thaliana OX=3702 GN=RPL22B PE=2 SV=1[more]
Q9FE584.1e-4190.4360S ribosomal protein L22-3 OS=Arabidopsis thaliana OX=3702 GN=RPL22C PE=2 SV=1[more]
Q9SRX71.2e-2969.15Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana OX=3702 GN=RPL22A P... [more]
Q90YU66.4e-2669.4760S ribosomal protein L22 OS=Ictalurus punctatus OX=7998 GN=rpl22 PE=2 SV=3[more]
P471981.9e-2567.3760S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2[more]
BLAST of Tan0022248 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6590443.12.1e-42100.0060S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022146066.12.1e-42100.0060S ribosomal protein L22-2 [Momordica charantia] >XP_022933854.1 60S ribosomal ... [more]
KAG6588488.12.1e-42100.0060S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022961443.12.1e-42100.0060S ribosomal protein L22-2-like [Cucurbita moschata] >XP_022968816.1 60S riboso... [more]
XP_004135607.14.7e-4298.9460S ribosomal protein L22-2 [Cucumis sativus] >XP_008450627.1 PREDICTED: 60S rib... [more]
BLAST of Tan0022248 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I4P71.0e-42100.0060S ribosomal protein L22-2 OS=Cucurbita maxima OX=3661 GN=LOC111469134 PE=3 SV=... [more]
A0A6J1HVX51.0e-42100.0060S ribosomal protein L22-2-like OS=Cucurbita maxima OX=3661 GN=LOC111467939 PE=... [more]
A0A6J1CY921.0e-42100.0060S ribosomal protein L22-2 OS=Momordica charantia OX=3673 GN=LOC111015359 PE=3 ... [more]
A0A6J1HBU51.0e-42100.0060S ribosomal protein L22-2-like OS=Cucurbita moschata OX=3662 GN=LOC111462024 P... [more]
A0A6J1F0W81.0e-42100.0060S ribosomal protein L22-2 OS=Cucurbita moschata OX=3662 GN=LOC111441145 PE=3 S... [more]
BLAST of Tan0022248 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G05560.11.3e-4290.43Ribosomal L22e protein family [more]
AT3G05560.21.3e-4290.43Ribosomal L22e protein family [more]
AT3G05560.31.3e-4290.43Ribosomal L22e protein family [more]
AT5G27770.12.9e-4290.43Ribosomal L22e protein family [more]
AT1G02830.18.8e-3169.15Ribosomal L22e protein family [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002671Ribosomal protein L22ePFAMPF01776Ribosomal_L22ecoord: 1..92
e-value: 2.4E-37
score: 127.7
IPR002671Ribosomal protein L22ePANTHERPTHR1006460S RIBOSOMAL PROTEIN L22coord: 1..94
IPR038526Ribosomal protein L22e superfamilyGENE3D3.30.1360.210coord: 1..94
e-value: 1.1E-44
score: 153.2
NoneNo IPR availablePANTHERPTHR10064:SF1660S RIBOSOMAL PROTEIN L22-2coord: 1..94

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0022248.1Tan0022248.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0006412 translation
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005840 ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome