Tan0022116 (gene) Snake gourd v1

Overview


Name	Tan0022116
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	rho GTPase-activating protein gacH
Location	LG10: 17870342 .. 17875599 (-)
RNA-Seq Expression	Tan0022116
Synteny	Tan0022116

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTACAGCTCCAAATATGGCAACAATCACAGCCGCTTTAGAACGATCTCTTCAGAAGTGTTCCTTAAGCCGCCATCATCAAGCTCTTTCTTCTGATTCCTCTTCTTCTAATCAACAACAAACTCATCTTCTTCAACCTCAAACCACTTTGGACCTCAACTCCCATCTCTCTCTCCCTTACCACTGGGAGCAGTGTCTCGATTTAAAGGTTCTTCTTCTAAATTCTTCTTTCTTCACCTCATTTTTTGCTTCTCTTTTCTTTTCTTTTCAAAATTAGGGTTTCAAAACCCTTTTTGCCCCTTTTTATCTCAACATCTTTCCATTTCCCTGAAAGGAATTTGAGTTTGAAAAATTATTTAGTGGGTTTTGTTTCACTCTGAAGGGTTGTTTCTAATTTGAGAAGACAATATATATGTAGAAATGTGTGATGATTTGTTTCTTTTTTTGACAGACAGGGGAGATATATTACATAAACTGGAGGAATGGGATGAAGGCGAAGGAAGATCCAAGGTCCACCACAGAGGATCAATACACTGAAGATTACTACTACTACTCCGACTCCGAGGATGACAGCTCTTACGACAGCGAAGAATCGTCCACGGAGTCGTCGAACAACAATAACAACAACAATAACAAAAACTTTGCAACCATGGAAGCACAACAAGAAGAACAAGAACAAGAAGAAGATCATGTTTTGGTGGTTGCAGGTTGCAAGAGCTGCTTAATGTATTTTATGGTGCCCAAACATCTTGAAGATTGCCCTAAATGCAGTACTGGTCAGCTTCTCCATTTTGATCGCTCTGAAAATGACATTCCATGAATCAGACAACTTCCCTTTTTTTCTTTTTTTTTTCATTTTCATTATTCCTCTTTCTTTTCTTTCTCTTTTTCCTTTGCCTTTTCCTTTGTTTCATGGGAAAAAGAGGGGGAAGAAAGAGAAACAATTTAAGAGAGAGAGAAACCCTTTTCTTTTTTCTTTTTTTTTCTTTTTGCTTTCAAATTGTTTCCATGTGTATTTGTCAGAAAAAGGAGGCAAATATGGGTTTTGGTTTTAGTTTTGATTTTAGTTTTGGCTTTAGTTTTACTTTTATCAATTAGTTCATTTTTTTTTTCCTTTCATTGTTTTTACTTACCTTTCTTTTCTTTTTGAACTCTAATGGGAAATGGAAGAATGAGAATCATGTGAATGGATGTTAATCTGCAAACAAAGCTTATTTTAATGGAAATAGATTTTCAGGAAAACAATAAAACAAAAAACAATTAATAATGTGTTTTATAGCTAGAGAGTTATTTTAATTGTTTAGTTTATAGCCCTGTAAAATTCCTTATAGGGCATAACCCATAAGTCAAATGTTTTATATTATTCAAACTTAATTCTGTTTCTTGTTCTTCAAATCCAAACTTTTATATATAAATATATTTTAGGTTCAACAATATGCAAATAAAAATTTAAACCTTTTGATCTCTCTCGAATTTATAGTGCTTTTAACTAGTTCAAAGATATGATTAACTATTTTTGTTTGTCATTTATCTTGCATGCATGCTATATATATTTATAGTCTCTTTGTAATTGGGTGTATTTTGAAATTGCTTCTATTTTATTTAACTTTGAAAGTTATTCGGAATTTAAGATATTTTTTTTAATCAAGTTATATATCAAAGAAATTTAATAGTTATCTAATAATTATTTTTTAAAATGTTATTGTTCCTTCTTTTTATTATTTTTGGAAATTAACCTGTCAAACCATTTTTCTATTTTAAAAAATATTAAACTTTTTTTTAGCAGTCTCTTTACATATACCAATATGTCACTGCCTTTCGCAAAACTATTGTATTAATTATAATGTAGTAATGATAATCCATGTTTCTCCATTTCCTTTTTCTTTTTTGCTTTTTTTTTTCCTTTTTACGTTTTGTTAGTTCTTCGTCTTTCAAACAAAAAAAAATGATTTGACTATTGCTGTTTTTATAACATATTTACAATTATTTCTGTTTTTTATTATTATTTTATAAATCTGATTTGCTATAATTCTAGTCTTGAAAAATAAATGCTCAACATTAAGAATTAAATCTTCAACGAAAATATATTTAGATTTTTCTTTTTTGAGTTAAAAATAAGTGGGGGAGATTTAAACCTTTGGCATCTTGGTCACATGGTTAACATATATTTAGATTCTTATAAAGTTATTCCTTCTTTTATTTGTTCATTAATTAAATAAATTTGTGAATGATGATGCTGATTTAAATCCTAATTTGATCTATGGATTTTATTCAAAATTATTCTATTTTGGTACGGAAACTTTCGTGATCTAAGAACTTTAAAATTTATTTCATTTACTTTTAGTAATTAAAATTCAAAATATATATTCGAGTTTCAAAAGAATAATTATTTTGGTTGATTACACTTGTTTTCCTTTTCAGAAAATGGATAGTGTAGAATTTTTTTTTAGTTCAATAACAACATTACGAGGATTCGAAGCTCTGACCTATCTGTCGAGAGTACATATCAATTATCGTTGAGCTATACACACTTTAACATGAATAACATAGATTTGAGTCCGTGTATAATGTGCTAATTAATGTAGACATGTATTAAAGCAAAATAGGTTAGTTAAGCCAAGTCAAGCTAGCATGCATGTGTGTTAGAATAGATGATAATATTTTTTTAAAATAAAAAATTGAAAGTTCAAGAATTGACACAGATCTTTTAAAAGCTTAGAAACCAAAATAGATATTTTTTTCTTATTATTCTTTAGAAGTTAAGCATATTGAAATAGAAATTTTAAAAGTTTAGACCTCATTTAATATCCATTTGGTTTTTGAAAATTATGATTGTTTTCTTTACAATTTCTCCTCACTACAATGGTTTCCATTTTTCTTGAGGTATTATTTAAGTTTCTAGCCAAATTTTAAAAACAAAAATAAGTTTTTAAAAATAATTTTTTTAGTTTTCAAAACTTAGATTATTTTTAAAAACATAGGTACAAAGTAAATGAAAAAACATAGAAACCTTGATAGAAGTAGTATTTTTAGACTTAATTTTTAAAAACCAAAAGGTTATTAAAAGGATTAAAATCTACCTTTAAAATTTTCATACCTAAAATAGAACAAACCTATAATTTCAAAAACTAAGATATATACAATTCAAACCAATGACTTTAAAGGTATTATAATCTTGAACAAGTTGTATTAAAATGATTTGGCTAAATAAATTATAGAAATACTCCTAAACTTTAATGCTTTGTTTGGTGGATGAATTTGATAAGAAATGATTTCAAATTCAGGATTTTAAAAGATGGAAATGATTTTAAATTCTTTTTTACGTTTGGAATGAAAATGATTTGAAATTCCATAAATTAAATTTTTTTGTTTGGATGCTCACGAGAAATGAAAAGAAAGTACAACATTTTACTATTACACCCTTATGATTCTACGGTAAATTATTTTATTAATAACAAATTTTTTAATATCAAATAACAATGCATATAACGGTGAAAACATATCATATATTCAAAACAAATGAACTTATTAAATTAAAAAATTACAAATGTCATCATTATTGTAAAAAAAATTAAAATAAAAAATAGATGTGAATGTCTTAATTCATTGTAAGAAAATAAAAATCAAACTCAACCAAATCTAAACAAAACTCATTATTTATTGCCTCCCATTTTCGAATGTAGCCATTCTTTGCACATAGATTCTGGACATCCAAAAATGTCTGTGTGATCATGGGATCAAATAAAATGAAGCTAGAAGTATTGAATATCTCATTGTATAAATATTTTCTCCTTCCACTTTGTCTCAAGCAACTCTCTCGATTTCAACTTCGCCCCTCAAAAATTGAAGATTCTCTCAAATCCTCCCCCTGTTACTTCTTCTCATTCAGAACTCACTACTTATTTTTCATGCTTTACTCATGCTTTGAGGTATTGATTTTATATTTTTGTTTTATTTTTTCATAGATTTATGTTGATTTGTTCTTTTCATCCATATAGAAAAAAAAAATCATTAATGTATGAAAAATTAAAATGAATATATACATACAGATCAACAAAAAAATATTGAATCAATATACAAAAAGGAACAAAAAAAAAATATCAAATCAATTAAAAAGAATTGAAAGATGAACAAAGCAAGAAAACTAATTAACCTCTAGTTGTTGTTGGAATTGAGAACTGCATTGAAAAAAATGAAATTATTTGAATCTATTAAAAAAATAGCAAAAGAGTGGAGAAATAAAATAGAGGGTTTCTACATAAATAGCCCAATTTGGAGACCCATTTGACACAAAAGTATAAACTTCACCATCTTTTACATGAATGTACATTTGGGCCTATTTTTTACATAAAAGTTGGTGGCAGATTACTCTTAAGCCCTCATTGATCTGGCACTTTTTTAAAAAAAAAATTAAAAACAAAAGAAGGAATTAAATGAACGATTTTATTACATGGCTCTTTAGGAAGATATTCAAAATAGGAAACAAACGGGAACGTTGTGCAAAATCTTCGGCCCACCAAAAACAAAAAATTCTCTGACCTGCATTTCGAAGGAGGGGATTGAGAACGAAATAGAACCCGACGAATATCAACTCGAAGAAGACGGAGAAGGAGGACAGTATTATACACTGGGGTATGTTACATTTAGTCCATTAATGTTTTTTTTTTTTTTTGGATTTTGAACAAAAACAAATGTTTATACAACAAAAACACTGTTAAGGTTTTGAGGTATATGTGATATGTTAGTTAGGGTTTAGTTTTTTTTTTTAGATTACTGGTATAAGATTTCAAGTTCAGTGATGAATACTGTAAAAAAAAAAGTTATAAATAATCATATTTAATAGACTTATGTTTATAATGAAATTGTTTTTTTTTCATGTGGTATCTGATGTTTAAAACTAATGTTTATAATGTGTTTAATATTGTGTAATGTATTTACAATGTGGTTATATATCATATACTAGAAGTATATTTAAAAGTTATAATGTTGAGTATGAAGTTACGTTAGTTATTGTAATTTACAATACACTATGGTATATACTAGTTAGTATTGTGCACTTGGGAGATATATTACCTGGTAATGAGAATTTATAAAACTGTTAACACTGTGGAATATGTGGAATTTAATGTGGAATATGTTGAAAATTTTGATTTAATGTGATATTTATATACGTGTGCATATATCATGTATATGTACTTATGTAGTGTAATGCTTGATATATACTTACATATATGACTAGGTAATGGCTACAGTTAG

mRNA sequence

ATGAGTACAGCTCCAAATATGGCAACAATCACAGCCGCTTTAGAACGATCTCTTCAGAAGTGTTCCTTAAGCCGCCATCATCAAGCTCTTTCTTCTGATTCCTCTTCTTCTAATCAACAACAAACTCATCTTCTTCAACCTCAAACCACTTTGGACCTCAACTCCCATCTCTCTCTCCCTTACCACTGGGAGCAGTGTCTCGATTTAAAGACAGGGGAGATATATTACATAAACTGGAGGAATGGGATGAAGGCGAAGGAAGATCCAAGGTCCACCACAGAGGATCAATACACTGAAGATTACTACTACTACTCCGACTCCGAGGATGACAGCTCTTACGACAGCGAAGAATCGTCCACGGAGTCGTCGAACAACAATAACAACAACAATAACAAAAACTTTGCAACCATGGAAGCACAACAAGAAGAACAAGAACAAGAAGAAGATCATGTTTTGGTGGTTGCAGGTTGCAAGAGCTGCTTAATGTATTTTATGGTGCCCAAACATCTTGAAGATTGCCCTAAATGCAGTACTGGTAATGGCTACAGTTAG

Coding sequence (CDS)

ATGAGTACAGCTCCAAATATGGCAACAATCACAGCCGCTTTAGAACGATCTCTTCAGAAGTGTTCCTTAAGCCGCCATCATCAAGCTCTTTCTTCTGATTCCTCTTCTTCTAATCAACAACAAACTCATCTTCTTCAACCTCAAACCACTTTGGACCTCAACTCCCATCTCTCTCTCCCTTACCACTGGGAGCAGTGTCTCGATTTAAAGACAGGGGAGATATATTACATAAACTGGAGGAATGGGATGAAGGCGAAGGAAGATCCAAGGTCCACCACAGAGGATCAATACACTGAAGATTACTACTACTACTCCGACTCCGAGGATGACAGCTCTTACGACAGCGAAGAATCGTCCACGGAGTCGTCGAACAACAATAACAACAACAATAACAAAAACTTTGCAACCATGGAAGCACAACAAGAAGAACAAGAACAAGAAGAAGATCATGTTTTGGTGGTTGCAGGTTGCAAGAGCTGCTTAATGTATTTTATGGTGCCCAAACATCTTGAAGATTGCCCTAAATGCAGTACTGGTAATGGCTACAGTTAG

Protein sequence

MSTAPNMATITAALERSLQKCSLSRHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQYTEDYYYYSDSEDDSSYDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGNGYS

Homology

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BLAST of Tan0022116 vs. NCBI nr
Match: KAG7029133.1 (hypothetical protein SDJN02_10318 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 255.0 bits (650), Expect = 5.0e-64
Identity = 137/183 (74.86%), Postives = 149/183 (81.42%), Query Frame = 0


Query: 1   MSTAPNMATITAALERSLQKCSLS----RHHQALSSDSSSSNQQQTHLLQPQTTLDLNSH 60
           MST PNMATITAALERSLQ CSLS    RHH        + N   + LLQP TTLDLNSH
Sbjct: 10  MSTPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSH 69

Query: 61  LSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQYTEDYYYYSDSEDDSSYDSE 120
           +SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRS TED Y+ED YYYSD +DD   DS+
Sbjct: 70  ISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSITEDHYSED-YYYSDDDDDDDEDSD 129

Query: 121 ESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKC 180
           ESSTESS NNNN NNKN+A ME Q+EE+E+EE+ VLVVAGCKSCLMYFMVPK +EDCPKC
Sbjct: 130 ESSTESS-NNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKC 189

[Close]

BLAST of Tan0022116 vs. NCBI nr
Match: KAG6597689.1 (hypothetical protein SDJN03_10869, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 251.9 bits (642), Expect = 4.2e-63
Identity = 136/183 (74.32%), Postives = 147/183 (80.33%), Query Frame = 0


Query: 1   MSTAPNMATITAALERSLQKCSLS----RHHQALSSDSSSSNQQQTHLLQPQTTLDLNSH 60
           MS  PNMATITAALERSLQ CSLS    RHH        + N   + LLQP TTLDLNSH
Sbjct: 25  MSIPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSH 84

Query: 61  LSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQYTEDYYYYSDSEDDSSYDSE 120
           +SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRS TED Y+ED YYYSD +DD   DS 
Sbjct: 85  ISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSITEDHYSED-YYYSDDDDDDDEDSN 144

Query: 121 ESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKC 180
           ESSTESS NNNN NNKN+A ME Q+EE+E+EE+ VLVVAGCKSCLMYFMVPK +EDCPKC
Sbjct: 145 ESSTESS-NNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKC 204

[Close]

BLAST of Tan0022116 vs. NCBI nr
Match: XP_022972321.1 (uncharacterized protein LOC111470894 [Cucurbita maxima] >XP_022972322.1 uncharacterized protein LOC111470894 [Cucurbita maxima])

HSP 1 Score: 250.8 bits (639), Expect = 9.3e-63
Identity = 136/186 (73.12%), Postives = 148/186 (79.57%), Query Frame = 0


Query: 1   MSTAPNMATITAALERSLQKCSLS-----RHHQALSSDSSSSNQQQTHLLQPQTTLDLNS 60
           MST PNMATITAALERSLQ CSLS     RHH        + N   +HLLQP TTLDLNS
Sbjct: 1   MSTPPNMATITAALERSLQNCSLSRHRRRRHHDHHQQQQHAPNSSSSHLLQPPTTLDLNS 60

Query: 61  HLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQYTEDYYYYSDSEDDSSYDS 120
           H+SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRS TED Y+EDYYY+ D +     DS
Sbjct: 61  HISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSITEDHYSEDYYYFDDDD-----DS 120

Query: 121 EESSTESSNNNNNNNNKNFATMEAQ--QEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDC 180
           +ESSTESS NNNN NNKN+A ME Q  QEE+E+EE+ VLVVAGCKSCLMYFMVPK +EDC
Sbjct: 121 DESSTESS-NNNNKNNKNYAAMEEQEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDC 180

[Close]

BLAST of Tan0022116 vs. NCBI nr
Match: XP_023540596.1 (histone chaperone RTT106-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 247.7 bits (631), Expect = 7.9e-62
Identity = 136/183 (74.32%), Postives = 147/183 (80.33%), Query Frame = 0


Query: 1   MSTAPNMATITAALERSLQKCSLS----RHHQALSSDSSSSNQQQTHLLQPQTTLDLNSH 60
           MST PNMATITAALERSLQ CSLS    RHH        + N   + LLQP TTLDLNSH
Sbjct: 10  MSTPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSH 69

Query: 61  LSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQYTEDYYYYSDSEDDSSYDSE 120
           +SLP HWEQCLDLKTGEIYYINWRNGMKAKEDPRS TED Y+EDYYY  D +DD   DS+
Sbjct: 70  ISLPCHWEQCLDLKTGEIYYINWRNGMKAKEDPRSITEDHYSEDYYYSDDDDDD---DSD 129

Query: 121 ESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKC 180
           ESSTESS NNNN NNKN+A ME Q+EE+E+EED VLVVAGCKSCLMYFMVPK +EDCPKC
Sbjct: 130 ESSTESS-NNNNENNKNYAAMEEQEEEEEEEED-VLVVAGCKSCLMYFMVPKLVEDCPKC 187

[Close]

BLAST of Tan0022116 vs. NCBI nr
Match: XP_022932700.1 (rho GTPase-activating protein gacH [Cucurbita moschata])

HSP 1 Score: 246.5 bits (628), Expect = 1.8e-61
Identity = 135/182 (74.18%), Postives = 146/182 (80.22%), Query Frame = 0


Query: 1   MSTAPNMATITAALERSLQKCSLS---RHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHL 60
           MST PNMATITAALERSLQ CSLS   RHH        + N   + LLQP TTLDLNSH+
Sbjct: 10  MSTPPNMATITAALERSLQNCSLSRRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHI 69

Query: 61  SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQYTEDYYYYSDSEDDSSYDSEE 120
           SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR  TED Y+EDYYY   S+DD   DS+E
Sbjct: 70  SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRPITEDHYSEDYYY---SDDDDDEDSDE 129

Query: 121 SSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCS 180
           SSTESS NNNN N KN+A ME Q+EE+E+EED VLVVAGCKSCLMYFMVPK +EDCPKCS
Sbjct: 130 SSTESS-NNNNENKKNYAAMEEQEEEEEEEED-VLVVAGCKSCLMYFMVPKLVEDCPKCS 186

[Close]

BLAST of Tan0022116 vs. ExPASy TrEMBL
Match: A0A6J1I5N3 (uncharacterized protein LOC111470894 OS=Cucurbita maxima OX=3661 GN=LOC111470894 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 4.5e-63
Identity = 136/186 (73.12%), Postives = 148/186 (79.57%), Query Frame = 0


Query: 1   MSTAPNMATITAALERSLQKCSLS-----RHHQALSSDSSSSNQQQTHLLQPQTTLDLNS 60
           MST PNMATITAALERSLQ CSLS     RHH        + N   +HLLQP TTLDLNS
Sbjct: 1   MSTPPNMATITAALERSLQNCSLSRHRRRRHHDHHQQQQHAPNSSSSHLLQPPTTLDLNS 60

Query: 61  HLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQYTEDYYYYSDSEDDSSYDS 120
           H+SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRS TED Y+EDYYY+ D +     DS
Sbjct: 61  HISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSITEDHYSEDYYYFDDDD-----DS 120

Query: 121 EESSTESSNNNNNNNNKNFATMEAQ--QEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDC 180
           +ESSTESS NNNN NNKN+A ME Q  QEE+E+EE+ VLVVAGCKSCLMYFMVPK +EDC
Sbjct: 121 DESSTESS-NNNNKNNKNYAAMEEQEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDC 180

[Close]

BLAST of Tan0022116 vs. ExPASy TrEMBL
Match: A0A6J1F2V9 (rho GTPase-activating protein gacH OS=Cucurbita moschata OX=3662 GN=LOC111439168 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 8.5e-62
Identity = 135/182 (74.18%), Postives = 146/182 (80.22%), Query Frame = 0


Query: 1   MSTAPNMATITAALERSLQKCSLS---RHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHL 60
           MST PNMATITAALERSLQ CSLS   RHH        + N   + LLQP TTLDLNSH+
Sbjct: 10  MSTPPNMATITAALERSLQNCSLSRRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHI 69

Query: 61  SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQYTEDYYYYSDSEDDSSYDSEE 120
           SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR  TED Y+EDYYY   S+DD   DS+E
Sbjct: 70  SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRPITEDHYSEDYYY---SDDDDDEDSDE 129

Query: 121 SSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCS 180
           SSTESS NNNN N KN+A ME Q+EE+E+EED VLVVAGCKSCLMYFMVPK +EDCPKCS
Sbjct: 130 SSTESS-NNNNENKKNYAAMEEQEEEEEEEED-VLVVAGCKSCLMYFMVPKLVEDCPKCS 186

[Close]

BLAST of Tan0022116 vs. ExPASy TrEMBL
Match: A0A6J1GTR7 (uncharacterized protein LOC111457490 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457490 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 6.1e-52
Identity = 123/182 (67.58%), Postives = 133/182 (73.08%), Query Frame = 0


Query: 1   MSTAPNMATITAALERSLQKCSLSRHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLP 60
           MS AP MAT+TAALERSL+ CSLS    A    S S     TH       L LNSHLSLP
Sbjct: 1   MSRAPTMATVTAALERSLENCSLSHRQAAPPVPSDSHGGSSTH------HLHLNSHLSLP 60

Query: 61  YHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTE-DQYTEDYYYYS--DSEDDSSYDSEE 120
           YHWEQCLDLKTGEIYYINWRNGMKAKEDPR TTE DQY++DYY YS  D +DDSSYDSEE
Sbjct: 61  YHWEQCLDLKTGEIYYINWRNGMKAKEDPRFTTEDDQYSDDYYCYSDDDDDDDSSYDSEE 120

Query: 121 SSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCS 180
           SST SSNN N N N            +EQ+E+ VLVVAGCK CLMYFMVPKHLE+CPKCS
Sbjct: 121 SSTASSNNKNKNKNM-----------EEQQEEDVLVVAGCKRCLMYFMVPKHLEECPKCS 165

[Close]

BLAST of Tan0022116 vs. ExPASy TrEMBL
Match: A0A6J1IQL3 (methionine aminopeptidase 2-like OS=Cucurbita maxima OX=3661 GN=LOC111479618 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.8e-51
Identity = 123/187 (65.78%), Postives = 132/187 (70.59%), Query Frame = 0


Query: 1   MSTAPNMATITAALERSLQKCSLSRHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLP 60
           MS  P MAT+TAALERSLQ CSLS         S S     TH       L LNSHLSLP
Sbjct: 1   MSRTPTMATVTAALERSLQNCSLSHRQATPPVPSDSHGGSSTH------HLHLNSHLSLP 60

Query: 61  YHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTE-DQYTEDYYYYS-------DSEDDSS 120
           YHWEQCLDLKTGEIYYINWRNGMKAKEDPR TTE DQY++DYY YS       D +DDSS
Sbjct: 61  YHWEQCLDLKTGEIYYINWRNGMKAKEDPRFTTEDDQYSDDYYCYSDDDDDNDDDDDDSS 120

Query: 121 YDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLED 180
           YDSEESSTESSNN N N N            +EQ+E+ VLVVAGCK CLMYFMVPKHLE+
Sbjct: 121 YDSEESSTESSNNKNKNKNM-----------EEQQEEDVLVVAGCKRCLMYFMVPKHLEE 170

[Close]

BLAST of Tan0022116 vs. ExPASy TrEMBL
Match: A0A6J1GTV5 (protein Tube-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457490 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.2e-50
Identity = 123/193 (63.73%), Postives = 133/193 (68.91%), Query Frame = 0


Query: 1   MSTAPNMATITAALERSLQKCSLSRHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLP 60
           MS AP MAT+TAALERSL+ CSLS    A    S S     TH       L LNSHLSLP
Sbjct: 1   MSRAPTMATVTAALERSLENCSLSHRQAAPPVPSDSHGGSSTH------HLHLNSHLSLP 60

Query: 61  YHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTE-DQYTEDYYYYS-------------D 120
           YHWEQCLDLKTGEIYYINWRNGMKAKEDPR TTE DQY++DYY YS             D
Sbjct: 61  YHWEQCLDLKTGEIYYINWRNGMKAKEDPRFTTEDDQYSDDYYCYSDDDDDDDDDDDDDD 120

Query: 121 SEDDSSYDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMV 180
            +DDSSYDSEESST SSNN N N N            +EQ+E+ VLVVAGCK CLMYFMV
Sbjct: 121 DDDDSSYDSEESSTASSNNKNKNKNM-----------EEQQEEDVLVVAGCKRCLMYFMV 176

[Close]

BLAST of Tan0022116 vs. TAIR 10
Match: AT2G33510.1 (CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28070.1); Has 3898 Blast hits to 1138 proteins in 179 species: Archae - 0; Bacteria - 40; Metazoa - 2353; Fungi - 242; Plants - 298; Viruses - 92; Other Eukaryotes - 873 (source: NCBI BLink). )

HSP 1 Score: 168.7 bits (426), Expect = 4.4e-42
Identity = 102/179 (56.98%), Postives = 128/179 (71.51%), Query Frame = 0


Query: 4   APNMATITAALERSLQKCSLSRHHQALSSDS---SSSNQQQTHLLQPQTTLDLNSHLSLP 63
           APNM TIT +LE+S+  CSL+   + +  D    SSSN+  T +     TL+LNSHLSLP
Sbjct: 3   APNMETITESLEKSMMNCSLNDRRRRVVGDGFGRSSSNEHMTPI--SDRTLELNSHLSLP 62

Query: 64  YHWEQCLDLKTGEIYYINWRNGMKAKEDPRST-TEDQYTEDYYYYSDSEDDSS-YDSEES 123
            HWEQCLDLKTGEIYYINW+NGM+ KEDPR     D  + D Y    SE+DSS YDSEES
Sbjct: 63  CHWEQCLDLKTGEIYYINWKNGMRVKEDPRKVMNADPDSGDSYGTVCSEEDSSYYDSEES 122

Query: 124 STESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCS 178
           S+ESS ++  N+ +     E ++EE+E+EE+ VLVVAGCK+C MYFMVPK +EDCPKC+
Sbjct: 123 SSESSPSSRENHKEE----EEEEEEEEEEEEDVLVVAGCKACFMYFMVPKLVEDCPKCA 175

[Close]

BLAST of Tan0022116 vs. TAIR 10
Match: AT2G33510.2 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28070.1). )

HSP 1 Score: 158.7 bits (400), Expect = 4.5e-39
Identity = 102/194 (52.58%), Postives = 128/194 (65.98%), Query Frame = 0


Query: 4   APNMATITAALERSLQKCSLSRHHQALSSDS---SSSNQQQTHLLQPQTTLDLNSHLSLP 63
           APNM TIT +LE+S+  CSL+   + +  D    SSSN+  T +     TL+LNSHLSLP
Sbjct: 3   APNMETITESLEKSMMNCSLNDRRRRVVGDGFGRSSSNEHMTPI--SDRTLELNSHLSLP 62

Query: 64  YHWEQCLDLK---------------TGEIYYINWRNGMKAKEDPRST-TEDQYTEDYYYY 123
            HWEQCLDLK               TGEIYYINW+NGM+ KEDPR     D  + D Y  
Sbjct: 63  CHWEQCLDLKVKLITTETSNSCRFRTGEIYYINWKNGMRVKEDPRKVMNADPDSGDSYGT 122

Query: 124 SDSEDDSS-YDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMY 178
             SE+DSS YDSEESS+ESS ++  N+ +     E ++EE+E+EE+ VLVVAGCK+C MY
Sbjct: 123 VCSEEDSSYYDSEESSSESSPSSRENHKEE----EEEEEEEEEEEEDVLVVAGCKACFMY 182

[Close]

BLAST of Tan0022116 vs. TAIR 10
Match: AT1G28070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33510.1); Has 85 Blast hits to 77 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 124.8 bits (312), Expect = 7.2e-29
Identity = 83/179 (46.37%), Postives = 109/179 (60.89%), Query Frame = 0


Query: 7   MATITAALERSLQKCSLSRHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQC 66
           MA IT  LERS+Q CSL     ++      S++   H+      L+L+SH S+P H EQC
Sbjct: 1   MADITEYLERSMQNCSLIDRRSSMGDGFGMSDE---HIPISDRFLELSSHFSVPSHLEQC 60

Query: 67  LDLKTGEIYYINWRNGMKAKEDPR-STTEDQYTEDY------YYYSDSEDDSSYDSEESS 126
           LDLKTGEIYY +W +GM+ KEDPR S +   Y +          +S  E  S Y+SEESS
Sbjct: 61  LDLKTGEIYYRSWNSGMRVKEDPRKSMSRGNYADQSSGESSGTVFSSEEVSSYYESEESS 120

Query: 127 TESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCST 179
           +ESS ++             +  ++EQ+ED VLVVAGCK+CLMYFMVPK  +DCPKC+T
Sbjct: 121 SESSPSSR------------KYHKEEQDED-VLVVAGCKACLMYFMVPKLFKDCPKCAT 163

The following BLAST results are available for this feature:

BLAST of Tan0022116 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0022116 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7029133.1	5.0e-64	74.86	hypothetical protein SDJN02_10318 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6597689.1	4.2e-63	74.32	hypothetical protein SDJN03_10869, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022972321.1	9.3e-63	73.12	uncharacterized protein LOC111470894 [Cucurbita maxima] >XP_022972322.1 uncharac...	[more]
XP_023540596.1	7.9e-62	74.32	histone chaperone RTT106-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022932700.1	1.8e-61	74.18	rho GTPase-activating protein gacH [Cucurbita moschata]	[more]

BLAST of Tan0022116 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I5N3	4.5e-63	73.12	uncharacterized protein LOC111470894 OS=Cucurbita maxima OX=3661 GN=LOC111470894...	[more]
A0A6J1F2V9	8.5e-62	74.18	rho GTPase-activating protein gacH OS=Cucurbita moschata OX=3662 GN=LOC111439168...	[more]
A0A6J1GTR7	6.1e-52	67.58	uncharacterized protein LOC111457490 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IQL3	1.8e-51	65.78	methionine aminopeptidase 2-like OS=Cucurbita maxima OX=3661 GN=LOC111479618 PE=...	[more]
A0A6J1GTV5	1.2e-50	63.73	protein Tube-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457490 PE=4 ...	[more]

BLAST of Tan0022116 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33510.1	4.4e-42	56.98	CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis t...	[more]
AT2G33510.2	4.5e-39	52.58	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_c...	[more]
AT1G28070.1	7.2e-29	46.37	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 125..147
None	No IPR available	GENE3D	2.20.70.10		coord: 57..99 e-value: 1.1E-5 score: 26.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..132
None	No IPR available	PANTHER	PTHR14791:SF43	BNAA04G19570D PROTEIN	coord: 16..177
None	No IPR available	PANTHER	PTHR14791	BOMB/KIRA PROTEINS	coord: 16..177
IPR036020	WW domain superfamily	SUPERFAMILY	51045	WW domain	coord: 55..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0022116.1	Tan0022116.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding