Tan0022116 (gene) Snake gourd v1

Overview
NameTan0022116
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionrho GTPase-activating protein gacH
LocationLG10: 17870342 .. 17875599 (-)
RNA-Seq ExpressionTan0022116
SyntenyTan0022116
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTACAGCTCCAAATATGGCAACAATCACAGCCGCTTTAGAACGATCTCTTCAGAAGTGTTCCTTAAGCCGCCATCATCAAGCTCTTTCTTCTGATTCCTCTTCTTCTAATCAACAACAAACTCATCTTCTTCAACCTCAAACCACTTTGGACCTCAACTCCCATCTCTCTCTCCCTTACCACTGGGAGCAGTGTCTCGATTTAAAGGTTCTTCTTCTAAATTCTTCTTTCTTCACCTCATTTTTTGCTTCTCTTTTCTTTTCTTTTCAAAATTAGGGTTTCAAAACCCTTTTTGCCCCTTTTTATCTCAACATCTTTCCATTTCCCTGAAAGGAATTTGAGTTTGAAAAATTATTTAGTGGGTTTTGTTTCACTCTGAAGGGTTGTTTCTAATTTGAGAAGACAATATATATGTAGAAATGTGTGATGATTTGTTTCTTTTTTTGACAGACAGGGGAGATATATTACATAAACTGGAGGAATGGGATGAAGGCGAAGGAAGATCCAAGGTCCACCACAGAGGATCAATACACTGAAGATTACTACTACTACTCCGACTCCGAGGATGACAGCTCTTACGACAGCGAAGAATCGTCCACGGAGTCGTCGAACAACAATAACAACAACAATAACAAAAACTTTGCAACCATGGAAGCACAACAAGAAGAACAAGAACAAGAAGAAGATCATGTTTTGGTGGTTGCAGGTTGCAAGAGCTGCTTAATGTATTTTATGGTGCCCAAACATCTTGAAGATTGCCCTAAATGCAGTACTGGTCAGCTTCTCCATTTTGATCGCTCTGAAAATGACATTCCATGAATCAGACAACTTCCCTTTTTTTCTTTTTTTTTTCATTTTCATTATTCCTCTTTCTTTTCTTTCTCTTTTTCCTTTGCCTTTTCCTTTGTTTCATGGGAAAAAGAGGGGGAAGAAAGAGAAACAATTTAAGAGAGAGAGAAACCCTTTTCTTTTTTCTTTTTTTTTCTTTTTGCTTTCAAATTGTTTCCATGTGTATTTGTCAGAAAAAGGAGGCAAATATGGGTTTTGGTTTTAGTTTTGATTTTAGTTTTGGCTTTAGTTTTACTTTTATCAATTAGTTCATTTTTTTTTTCCTTTCATTGTTTTTACTTACCTTTCTTTTCTTTTTGAACTCTAATGGGAAATGGAAGAATGAGAATCATGTGAATGGATGTTAATCTGCAAACAAAGCTTATTTTAATGGAAATAGATTTTCAGGAAAACAATAAAACAAAAAACAATTAATAATGTGTTTTATAGCTAGAGAGTTATTTTAATTGTTTAGTTTATAGCCCTGTAAAATTCCTTATAGGGCATAACCCATAAGTCAAATGTTTTATATTATTCAAACTTAATTCTGTTTCTTGTTCTTCAAATCCAAACTTTTATATATAAATATATTTTAGGTTCAACAATATGCAAATAAAAATTTAAACCTTTTGATCTCTCTCGAATTTATAGTGCTTTTAACTAGTTCAAAGATATGATTAACTATTTTTGTTTGTCATTTATCTTGCATGCATGCTATATATATTTATAGTCTCTTTGTAATTGGGTGTATTTTGAAATTGCTTCTATTTTATTTAACTTTGAAAGTTATTCGGAATTTAAGATATTTTTTTTAATCAAGTTATATATCAAAGAAATTTAATAGTTATCTAATAATTATTTTTTAAAATGTTATTGTTCCTTCTTTTTATTATTTTTGGAAATTAACCTGTCAAACCATTTTTCTATTTTAAAAAATATTAAACTTTTTTTTAGCAGTCTCTTTACATATACCAATATGTCACTGCCTTTCGCAAAACTATTGTATTAATTATAATGTAGTAATGATAATCCATGTTTCTCCATTTCCTTTTTCTTTTTTGCTTTTTTTTTTCCTTTTTACGTTTTGTTAGTTCTTCGTCTTTCAAACAAAAAAAAATGATTTGACTATTGCTGTTTTTATAACATATTTACAATTATTTCTGTTTTTTATTATTATTTTATAAATCTGATTTGCTATAATTCTAGTCTTGAAAAATAAATGCTCAACATTAAGAATTAAATCTTCAACGAAAATATATTTAGATTTTTCTTTTTTGAGTTAAAAATAAGTGGGGGAGATTTAAACCTTTGGCATCTTGGTCACATGGTTAACATATATTTAGATTCTTATAAAGTTATTCCTTCTTTTATTTGTTCATTAATTAAATAAATTTGTGAATGATGATGCTGATTTAAATCCTAATTTGATCTATGGATTTTATTCAAAATTATTCTATTTTGGTACGGAAACTTTCGTGATCTAAGAACTTTAAAATTTATTTCATTTACTTTTAGTAATTAAAATTCAAAATATATATTCGAGTTTCAAAAGAATAATTATTTTGGTTGATTACACTTGTTTTCCTTTTCAGAAAATGGATAGTGTAGAATTTTTTTTTAGTTCAATAACAACATTACGAGGATTCGAAGCTCTGACCTATCTGTCGAGAGTACATATCAATTATCGTTGAGCTATACACACTTTAACATGAATAACATAGATTTGAGTCCGTGTATAATGTGCTAATTAATGTAGACATGTATTAAAGCAAAATAGGTTAGTTAAGCCAAGTCAAGCTAGCATGCATGTGTGTTAGAATAGATGATAATATTTTTTTAAAATAAAAAATTGAAAGTTCAAGAATTGACACAGATCTTTTAAAAGCTTAGAAACCAAAATAGATATTTTTTTCTTATTATTCTTTAGAAGTTAAGCATATTGAAATAGAAATTTTAAAAGTTTAGACCTCATTTAATATCCATTTGGTTTTTGAAAATTATGATTGTTTTCTTTACAATTTCTCCTCACTACAATGGTTTCCATTTTTCTTGAGGTATTATTTAAGTTTCTAGCCAAATTTTAAAAACAAAAATAAGTTTTTAAAAATAATTTTTTTAGTTTTCAAAACTTAGATTATTTTTAAAAACATAGGTACAAAGTAAATGAAAAAACATAGAAACCTTGATAGAAGTAGTATTTTTAGACTTAATTTTTAAAAACCAAAAGGTTATTAAAAGGATTAAAATCTACCTTTAAAATTTTCATACCTAAAATAGAACAAACCTATAATTTCAAAAACTAAGATATATACAATTCAAACCAATGACTTTAAAGGTATTATAATCTTGAACAAGTTGTATTAAAATGATTTGGCTAAATAAATTATAGAAATACTCCTAAACTTTAATGCTTTGTTTGGTGGATGAATTTGATAAGAAATGATTTCAAATTCAGGATTTTAAAAGATGGAAATGATTTTAAATTCTTTTTTACGTTTGGAATGAAAATGATTTGAAATTCCATAAATTAAATTTTTTTGTTTGGATGCTCACGAGAAATGAAAAGAAAGTACAACATTTTACTATTACACCCTTATGATTCTACGGTAAATTATTTTATTAATAACAAATTTTTTAATATCAAATAACAATGCATATAACGGTGAAAACATATCATATATTCAAAACAAATGAACTTATTAAATTAAAAAATTACAAATGTCATCATTATTGTAAAAAAAATTAAAATAAAAAATAGATGTGAATGTCTTAATTCATTGTAAGAAAATAAAAATCAAACTCAACCAAATCTAAACAAAACTCATTATTTATTGCCTCCCATTTTCGAATGTAGCCATTCTTTGCACATAGATTCTGGACATCCAAAAATGTCTGTGTGATCATGGGATCAAATAAAATGAAGCTAGAAGTATTGAATATCTCATTGTATAAATATTTTCTCCTTCCACTTTGTCTCAAGCAACTCTCTCGATTTCAACTTCGCCCCTCAAAAATTGAAGATTCTCTCAAATCCTCCCCCTGTTACTTCTTCTCATTCAGAACTCACTACTTATTTTTCATGCTTTACTCATGCTTTGAGGTATTGATTTTATATTTTTGTTTTATTTTTTCATAGATTTATGTTGATTTGTTCTTTTCATCCATATAGAAAAAAAAAATCATTAATGTATGAAAAATTAAAATGAATATATACATACAGATCAACAAAAAAATATTGAATCAATATACAAAAAGGAACAAAAAAAAAATATCAAATCAATTAAAAAGAATTGAAAGATGAACAAAGCAAGAAAACTAATTAACCTCTAGTTGTTGTTGGAATTGAGAACTGCATTGAAAAAAATGAAATTATTTGAATCTATTAAAAAAATAGCAAAAGAGTGGAGAAATAAAATAGAGGGTTTCTACATAAATAGCCCAATTTGGAGACCCATTTGACACAAAAGTATAAACTTCACCATCTTTTACATGAATGTACATTTGGGCCTATTTTTTACATAAAAGTTGGTGGCAGATTACTCTTAAGCCCTCATTGATCTGGCACTTTTTTAAAAAAAAAATTAAAAACAAAAGAAGGAATTAAATGAACGATTTTATTACATGGCTCTTTAGGAAGATATTCAAAATAGGAAACAAACGGGAACGTTGTGCAAAATCTTCGGCCCACCAAAAACAAAAAATTCTCTGACCTGCATTTCGAAGGAGGGGATTGAGAACGAAATAGAACCCGACGAATATCAACTCGAAGAAGACGGAGAAGGAGGACAGTATTATACACTGGGGTATGTTACATTTAGTCCATTAATGTTTTTTTTTTTTTTTGGATTTTGAACAAAAACAAATGTTTATACAACAAAAACACTGTTAAGGTTTTGAGGTATATGTGATATGTTAGTTAGGGTTTAGTTTTTTTTTTTAGATTACTGGTATAAGATTTCAAGTTCAGTGATGAATACTGTAAAAAAAAAAGTTATAAATAATCATATTTAATAGACTTATGTTTATAATGAAATTGTTTTTTTTTCATGTGGTATCTGATGTTTAAAACTAATGTTTATAATGTGTTTAATATTGTGTAATGTATTTACAATGTGGTTATATATCATATACTAGAAGTATATTTAAAAGTTATAATGTTGAGTATGAAGTTACGTTAGTTATTGTAATTTACAATACACTATGGTATATACTAGTTAGTATTGTGCACTTGGGAGATATATTACCTGGTAATGAGAATTTATAAAACTGTTAACACTGTGGAATATGTGGAATTTAATGTGGAATATGTTGAAAATTTTGATTTAATGTGATATTTATATACGTGTGCATATATCATGTATATGTACTTATGTAGTGTAATGCTTGATATATACTTACATATATGACTAGGTAATGGCTACAGTTAG

mRNA sequence

ATGAGTACAGCTCCAAATATGGCAACAATCACAGCCGCTTTAGAACGATCTCTTCAGAAGTGTTCCTTAAGCCGCCATCATCAAGCTCTTTCTTCTGATTCCTCTTCTTCTAATCAACAACAAACTCATCTTCTTCAACCTCAAACCACTTTGGACCTCAACTCCCATCTCTCTCTCCCTTACCACTGGGAGCAGTGTCTCGATTTAAAGACAGGGGAGATATATTACATAAACTGGAGGAATGGGATGAAGGCGAAGGAAGATCCAAGGTCCACCACAGAGGATCAATACACTGAAGATTACTACTACTACTCCGACTCCGAGGATGACAGCTCTTACGACAGCGAAGAATCGTCCACGGAGTCGTCGAACAACAATAACAACAACAATAACAAAAACTTTGCAACCATGGAAGCACAACAAGAAGAACAAGAACAAGAAGAAGATCATGTTTTGGTGGTTGCAGGTTGCAAGAGCTGCTTAATGTATTTTATGGTGCCCAAACATCTTGAAGATTGCCCTAAATGCAGTACTGGTAATGGCTACAGTTAG

Coding sequence (CDS)

ATGAGTACAGCTCCAAATATGGCAACAATCACAGCCGCTTTAGAACGATCTCTTCAGAAGTGTTCCTTAAGCCGCCATCATCAAGCTCTTTCTTCTGATTCCTCTTCTTCTAATCAACAACAAACTCATCTTCTTCAACCTCAAACCACTTTGGACCTCAACTCCCATCTCTCTCTCCCTTACCACTGGGAGCAGTGTCTCGATTTAAAGACAGGGGAGATATATTACATAAACTGGAGGAATGGGATGAAGGCGAAGGAAGATCCAAGGTCCACCACAGAGGATCAATACACTGAAGATTACTACTACTACTCCGACTCCGAGGATGACAGCTCTTACGACAGCGAAGAATCGTCCACGGAGTCGTCGAACAACAATAACAACAACAATAACAAAAACTTTGCAACCATGGAAGCACAACAAGAAGAACAAGAACAAGAAGAAGATCATGTTTTGGTGGTTGCAGGTTGCAAGAGCTGCTTAATGTATTTTATGGTGCCCAAACATCTTGAAGATTGCCCTAAATGCAGTACTGGTAATGGCTACAGTTAG

Protein sequence

MSTAPNMATITAALERSLQKCSLSRHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQYTEDYYYYSDSEDDSSYDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGNGYS
Homology
[Close]
BLAST of Tan0022116 vs. NCBI nr
Match: KAG7029133.1 (hypothetical protein SDJN02_10318 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 255.0 bits (650), Expect = 5.0e-64
Identity = 137/183 (74.86%), Postives = 149/183 (81.42%), Query Frame = 0 

Query: 1   MSTAPNMATITAALERSLQKCSLS----RHHQALSSDSSSSNQQQTHLLQPQTTLDLNSH 60
           MST PNMATITAALERSLQ CSLS    RHH        + N   + LLQP TTLDLNSH
Sbjct: 10  MSTPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSH 69

Query: 61  LSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQYTEDYYYYSDSEDDSSYDSE 120
           +SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRS TED Y+ED YYYSD +DD   DS+
Sbjct: 70  ISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSITEDHYSED-YYYSDDDDDDDEDSD 129

Query: 121 ESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKC 180
           ESSTESS NNNN NNKN+A ME Q+EE+E+EE+ VLVVAGCKSCLMYFMVPK +EDCPKC
Sbjct: 130 ESSTESS-NNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKC 189

[Close]
BLAST of Tan0022116 vs. NCBI nr
Match: KAG6597689.1 (hypothetical protein SDJN03_10869, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 251.9 bits (642), Expect = 4.2e-63
Identity = 136/183 (74.32%), Postives = 147/183 (80.33%), Query Frame = 0 

Query: 1   MSTAPNMATITAALERSLQKCSLS----RHHQALSSDSSSSNQQQTHLLQPQTTLDLNSH 60
           MS  PNMATITAALERSLQ CSLS    RHH        + N   + LLQP TTLDLNSH
Sbjct: 25  MSIPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSH 84

Query: 61  LSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQYTEDYYYYSDSEDDSSYDSE 120
           +SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRS TED Y+ED YYYSD +DD   DS 
Sbjct: 85  ISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSITEDHYSED-YYYSDDDDDDDEDSN 144

Query: 121 ESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKC 180
           ESSTESS NNNN NNKN+A ME Q+EE+E+EE+ VLVVAGCKSCLMYFMVPK +EDCPKC
Sbjct: 145 ESSTESS-NNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKC 204

[Close]
BLAST of Tan0022116 vs. NCBI nr
Match: XP_022972321.1 (uncharacterized protein LOC111470894 [Cucurbita maxima] >XP_022972322.1 uncharacterized protein LOC111470894 [Cucurbita maxima])

HSP 1 Score: 250.8 bits (639), Expect = 9.3e-63
Identity = 136/186 (73.12%), Postives = 148/186 (79.57%), Query Frame = 0 

Query: 1   MSTAPNMATITAALERSLQKCSLS-----RHHQALSSDSSSSNQQQTHLLQPQTTLDLNS 60
           MST PNMATITAALERSLQ CSLS     RHH        + N   +HLLQP TTLDLNS
Sbjct: 1   MSTPPNMATITAALERSLQNCSLSRHRRRRHHDHHQQQQHAPNSSSSHLLQPPTTLDLNS 60

Query: 61  HLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQYTEDYYYYSDSEDDSSYDS 120
           H+SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRS TED Y+EDYYY+ D +     DS
Sbjct: 61  HISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSITEDHYSEDYYYFDDDD-----DS 120

Query: 121 EESSTESSNNNNNNNNKNFATMEAQ--QEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDC 180
           +ESSTESS NNNN NNKN+A ME Q  QEE+E+EE+ VLVVAGCKSCLMYFMVPK +EDC
Sbjct: 121 DESSTESS-NNNNKNNKNYAAMEEQEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDC 180

[Close]
BLAST of Tan0022116 vs. NCBI nr
Match: XP_023540596.1 (histone chaperone RTT106-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 247.7 bits (631), Expect = 7.9e-62
Identity = 136/183 (74.32%), Postives = 147/183 (80.33%), Query Frame = 0 

Query: 1   MSTAPNMATITAALERSLQKCSLS----RHHQALSSDSSSSNQQQTHLLQPQTTLDLNSH 60
           MST PNMATITAALERSLQ CSLS    RHH        + N   + LLQP TTLDLNSH
Sbjct: 10  MSTPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSH 69

Query: 61  LSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQYTEDYYYYSDSEDDSSYDSE 120
           +SLP HWEQCLDLKTGEIYYINWRNGMKAKEDPRS TED Y+EDYYY  D +DD   DS+
Sbjct: 70  ISLPCHWEQCLDLKTGEIYYINWRNGMKAKEDPRSITEDHYSEDYYYSDDDDDD---DSD 129

Query: 121 ESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKC 180
           ESSTESS NNNN NNKN+A ME Q+EE+E+EED VLVVAGCKSCLMYFMVPK +EDCPKC
Sbjct: 130 ESSTESS-NNNNENNKNYAAMEEQEEEEEEEED-VLVVAGCKSCLMYFMVPKLVEDCPKC 187

[Close]
BLAST of Tan0022116 vs. NCBI nr
Match: XP_022932700.1 (rho GTPase-activating protein gacH [Cucurbita moschata])

HSP 1 Score: 246.5 bits (628), Expect = 1.8e-61
Identity = 135/182 (74.18%), Postives = 146/182 (80.22%), Query Frame = 0 

Query: 1   MSTAPNMATITAALERSLQKCSLS---RHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHL 60
           MST PNMATITAALERSLQ CSLS   RHH        + N   + LLQP TTLDLNSH+
Sbjct: 10  MSTPPNMATITAALERSLQNCSLSRRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHI 69

Query: 61  SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQYTEDYYYYSDSEDDSSYDSEE 120
           SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR  TED Y+EDYYY   S+DD   DS+E
Sbjct: 70  SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRPITEDHYSEDYYY---SDDDDDEDSDE 129

Query: 121 SSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCS 180
           SSTESS NNNN N KN+A ME Q+EE+E+EED VLVVAGCKSCLMYFMVPK +EDCPKCS
Sbjct: 130 SSTESS-NNNNENKKNYAAMEEQEEEEEEEED-VLVVAGCKSCLMYFMVPKLVEDCPKCS 186

[Close]
BLAST of Tan0022116 vs. ExPASy TrEMBL
Match: A0A6J1I5N3 (uncharacterized protein LOC111470894 OS=Cucurbita maxima OX=3661 GN=LOC111470894 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 4.5e-63
Identity = 136/186 (73.12%), Postives = 148/186 (79.57%), Query Frame = 0 

Query: 1   MSTAPNMATITAALERSLQKCSLS-----RHHQALSSDSSSSNQQQTHLLQPQTTLDLNS 60
           MST PNMATITAALERSLQ CSLS     RHH        + N   +HLLQP TTLDLNS
Sbjct: 1   MSTPPNMATITAALERSLQNCSLSRHRRRRHHDHHQQQQHAPNSSSSHLLQPPTTLDLNS 60

Query: 61  HLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQYTEDYYYYSDSEDDSSYDS 120
           H+SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRS TED Y+EDYYY+ D +     DS
Sbjct: 61  HISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSITEDHYSEDYYYFDDDD-----DS 120

Query: 121 EESSTESSNNNNNNNNKNFATMEAQ--QEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDC 180
           +ESSTESS NNNN NNKN+A ME Q  QEE+E+EE+ VLVVAGCKSCLMYFMVPK +EDC
Sbjct: 121 DESSTESS-NNNNKNNKNYAAMEEQEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDC 180

[Close]
BLAST of Tan0022116 vs. ExPASy TrEMBL
Match: A0A6J1F2V9 (rho GTPase-activating protein gacH OS=Cucurbita moschata OX=3662 GN=LOC111439168 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 8.5e-62
Identity = 135/182 (74.18%), Postives = 146/182 (80.22%), Query Frame = 0 

Query: 1   MSTAPNMATITAALERSLQKCSLS---RHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHL 60
           MST PNMATITAALERSLQ CSLS   RHH        + N   + LLQP TTLDLNSH+
Sbjct: 10  MSTPPNMATITAALERSLQNCSLSRRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHI 69

Query: 61  SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQYTEDYYYYSDSEDDSSYDSEE 120
           SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR  TED Y+EDYYY   S+DD   DS+E
Sbjct: 70  SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRPITEDHYSEDYYY---SDDDDDEDSDE 129

Query: 121 SSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCS 180
           SSTESS NNNN N KN+A ME Q+EE+E+EED VLVVAGCKSCLMYFMVPK +EDCPKCS
Sbjct: 130 SSTESS-NNNNENKKNYAAMEEQEEEEEEEED-VLVVAGCKSCLMYFMVPKLVEDCPKCS 186

[Close]
BLAST of Tan0022116 vs. ExPASy TrEMBL
Match: A0A6J1GTR7 (uncharacterized protein LOC111457490 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457490 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 6.1e-52
Identity = 123/182 (67.58%), Postives = 133/182 (73.08%), Query Frame = 0 

Query: 1   MSTAPNMATITAALERSLQKCSLSRHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLP 60
           MS AP MAT+TAALERSL+ CSLS    A    S S     TH       L LNSHLSLP
Sbjct: 1   MSRAPTMATVTAALERSLENCSLSHRQAAPPVPSDSHGGSSTH------HLHLNSHLSLP 60

Query: 61  YHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTE-DQYTEDYYYYS--DSEDDSSYDSEE 120
           YHWEQCLDLKTGEIYYINWRNGMKAKEDPR TTE DQY++DYY YS  D +DDSSYDSEE
Sbjct: 61  YHWEQCLDLKTGEIYYINWRNGMKAKEDPRFTTEDDQYSDDYYCYSDDDDDDDSSYDSEE 120

Query: 121 SSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCS 180
           SST SSNN N N N            +EQ+E+ VLVVAGCK CLMYFMVPKHLE+CPKCS
Sbjct: 121 SSTASSNNKNKNKNM-----------EEQQEEDVLVVAGCKRCLMYFMVPKHLEECPKCS 165

[Close]
BLAST of Tan0022116 vs. ExPASy TrEMBL
Match: A0A6J1IQL3 (methionine aminopeptidase 2-like OS=Cucurbita maxima OX=3661 GN=LOC111479618 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.8e-51
Identity = 123/187 (65.78%), Postives = 132/187 (70.59%), Query Frame = 0 

Query: 1   MSTAPNMATITAALERSLQKCSLSRHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLP 60
           MS  P MAT+TAALERSLQ CSLS         S S     TH       L LNSHLSLP
Sbjct: 1   MSRTPTMATVTAALERSLQNCSLSHRQATPPVPSDSHGGSSTH------HLHLNSHLSLP 60

Query: 61  YHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTE-DQYTEDYYYYS-------DSEDDSS 120
           YHWEQCLDLKTGEIYYINWRNGMKAKEDPR TTE DQY++DYY YS       D +DDSS
Sbjct: 61  YHWEQCLDLKTGEIYYINWRNGMKAKEDPRFTTEDDQYSDDYYCYSDDDDDNDDDDDDSS 120

Query: 121 YDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLED 180
           YDSEESSTESSNN N N N            +EQ+E+ VLVVAGCK CLMYFMVPKHLE+
Sbjct: 121 YDSEESSTESSNNKNKNKNM-----------EEQQEEDVLVVAGCKRCLMYFMVPKHLEE 170

[Close]
BLAST of Tan0022116 vs. ExPASy TrEMBL
Match: A0A6J1GTV5 (protein Tube-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457490 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.2e-50
Identity = 123/193 (63.73%), Postives = 133/193 (68.91%), Query Frame = 0 

Query: 1   MSTAPNMATITAALERSLQKCSLSRHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLP 60
           MS AP MAT+TAALERSL+ CSLS    A    S S     TH       L LNSHLSLP
Sbjct: 1   MSRAPTMATVTAALERSLENCSLSHRQAAPPVPSDSHGGSSTH------HLHLNSHLSLP 60

Query: 61  YHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTE-DQYTEDYYYYS-------------D 120
           YHWEQCLDLKTGEIYYINWRNGMKAKEDPR TTE DQY++DYY YS             D
Sbjct: 61  YHWEQCLDLKTGEIYYINWRNGMKAKEDPRFTTEDDQYSDDYYCYSDDDDDDDDDDDDDD 120

Query: 121 SEDDSSYDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMV 180
            +DDSSYDSEESST SSNN N N N            +EQ+E+ VLVVAGCK CLMYFMV
Sbjct: 121 DDDDSSYDSEESSTASSNNKNKNKNM-----------EEQQEEDVLVVAGCKRCLMYFMV 176

[Close]
BLAST of Tan0022116 vs. TAIR 10
Match: AT2G33510.1 (CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28070.1); Has 3898 Blast hits to 1138 proteins in 179 species: Archae - 0; Bacteria - 40; Metazoa - 2353; Fungi - 242; Plants - 298; Viruses - 92; Other Eukaryotes - 873 (source: NCBI BLink). )

HSP 1 Score: 168.7 bits (426), Expect = 4.4e-42
Identity = 102/179 (56.98%), Postives = 128/179 (71.51%), Query Frame = 0 

Query: 4   APNMATITAALERSLQKCSLSRHHQALSSDS---SSSNQQQTHLLQPQTTLDLNSHLSLP 63
           APNM TIT +LE+S+  CSL+   + +  D    SSSN+  T +     TL+LNSHLSLP
Sbjct: 3   APNMETITESLEKSMMNCSLNDRRRRVVGDGFGRSSSNEHMTPI--SDRTLELNSHLSLP 62

Query: 64  YHWEQCLDLKTGEIYYINWRNGMKAKEDPRST-TEDQYTEDYYYYSDSEDDSS-YDSEES 123
            HWEQCLDLKTGEIYYINW+NGM+ KEDPR     D  + D Y    SE+DSS YDSEES
Sbjct: 63  CHWEQCLDLKTGEIYYINWKNGMRVKEDPRKVMNADPDSGDSYGTVCSEEDSSYYDSEES 122

Query: 124 STESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCS 178
           S+ESS ++  N+ +     E ++EE+E+EE+ VLVVAGCK+C MYFMVPK +EDCPKC+
Sbjct: 123 SSESSPSSRENHKEE----EEEEEEEEEEEEDVLVVAGCKACFMYFMVPKLVEDCPKCA 175

[Close]
BLAST of Tan0022116 vs. TAIR 10
Match: AT2G33510.2 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28070.1). )

HSP 1 Score: 158.7 bits (400), Expect = 4.5e-39
Identity = 102/194 (52.58%), Postives = 128/194 (65.98%), Query Frame = 0 

Query: 4   APNMATITAALERSLQKCSLSRHHQALSSDS---SSSNQQQTHLLQPQTTLDLNSHLSLP 63
           APNM TIT +LE+S+  CSL+   + +  D    SSSN+  T +     TL+LNSHLSLP
Sbjct: 3   APNMETITESLEKSMMNCSLNDRRRRVVGDGFGRSSSNEHMTPI--SDRTLELNSHLSLP 62

Query: 64  YHWEQCLDLK---------------TGEIYYINWRNGMKAKEDPRST-TEDQYTEDYYYY 123
            HWEQCLDLK               TGEIYYINW+NGM+ KEDPR     D  + D Y  
Sbjct: 63  CHWEQCLDLKVKLITTETSNSCRFRTGEIYYINWKNGMRVKEDPRKVMNADPDSGDSYGT 122

Query: 124 SDSEDDSS-YDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMY 178
             SE+DSS YDSEESS+ESS ++  N+ +     E ++EE+E+EE+ VLVVAGCK+C MY
Sbjct: 123 VCSEEDSSYYDSEESSSESSPSSRENHKEE----EEEEEEEEEEEEDVLVVAGCKACFMY 182

[Close]
BLAST of Tan0022116 vs. TAIR 10
Match: AT1G28070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33510.1); Has 85 Blast hits to 77 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 124.8 bits (312), Expect = 7.2e-29
Identity = 83/179 (46.37%), Postives = 109/179 (60.89%), Query Frame = 0 

Query: 7   MATITAALERSLQKCSLSRHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQC 66
           MA IT  LERS+Q CSL     ++      S++   H+      L+L+SH S+P H EQC
Sbjct: 1   MADITEYLERSMQNCSLIDRRSSMGDGFGMSDE---HIPISDRFLELSSHFSVPSHLEQC 60

Query: 67  LDLKTGEIYYINWRNGMKAKEDPR-STTEDQYTEDY------YYYSDSEDDSSYDSEESS 126
           LDLKTGEIYY +W +GM+ KEDPR S +   Y +          +S  E  S Y+SEESS
Sbjct: 61  LDLKTGEIYYRSWNSGMRVKEDPRKSMSRGNYADQSSGESSGTVFSSEEVSSYYESEESS 120

Query: 127 TESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCST 179
           +ESS ++             +  ++EQ+ED VLVVAGCK+CLMYFMVPK  +DCPKC+T
Sbjct: 121 SESSPSSR------------KYHKEEQDED-VLVVAGCKACLMYFMVPKLFKDCPKCAT 163

The following BLAST results are available for this feature:
BLAST of Tan0022116 vs.
Match NameE-valueIdentityDescription
BLAST of Tan0022116 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7029133.15.0e-6474.86hypothetical protein SDJN02_10318 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6597689.14.2e-6374.32hypothetical protein SDJN03_10869, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022972321.19.3e-6373.12uncharacterized protein LOC111470894 [Cucurbita maxima] >XP_022972322.1 uncharac... [more]
XP_023540596.17.9e-6274.32histone chaperone RTT106-like isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022932700.11.8e-6174.18rho GTPase-activating protein gacH [Cucurbita moschata][more]
BLAST of Tan0022116 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I5N34.5e-6373.12uncharacterized protein LOC111470894 OS=Cucurbita maxima OX=3661 GN=LOC111470894... [more]
A0A6J1F2V98.5e-6274.18rho GTPase-activating protein gacH OS=Cucurbita moschata OX=3662 GN=LOC111439168... [more]
A0A6J1GTR76.1e-5267.58uncharacterized protein LOC111457490 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1IQL31.8e-5165.78methionine aminopeptidase 2-like OS=Cucurbita maxima OX=3661 GN=LOC111479618 PE=... [more]
A0A6J1GTV51.2e-5063.73protein Tube-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457490 PE=4 ... [more]
BLAST of Tan0022116 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G33510.14.4e-4256.98CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis t... [more]
AT2G33510.24.5e-3952.58unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_c... [more]
AT1G28070.17.2e-2946.37unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 125..147
NoneNo IPR availableGENE3D2.20.70.10coord: 57..99
e-value: 1.1E-5
score: 26.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..132
NoneNo IPR availablePANTHERPTHR14791:SF43BNAA04G19570D PROTEINcoord: 16..177
NoneNo IPR availablePANTHERPTHR14791BOMB/KIRA PROTEINScoord: 16..177
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 55..91

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0022116.1Tan0022116.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding