Tan0022099 (gene) Snake gourd v1

Overview
NameTan0022099
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionATP-binding/protein serine/threonine kinase
LocationLG01: 76004348 .. 76004690 (+)
RNA-Seq ExpressionTan0022099
SyntenyTan0022099
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGACATGTACTAAGATAGCTTGTCTACTTCTGATGTTCTTTATTGTCTCTGGTATATGAATTAACTATATTTTTTTCTATCGTATATATCATCTTTTTCACCAATTCTTATAATTTTACGTGACTGACAATCATCAATGAGAATATTTCAGGATCATTATTCGTGTCAGATGCAAGAAATGTAGTAAATGTTCCATGCAATACTCCTAATGATTGTTTCGATCCAACTGCATGTGATTGCAAAATCAACCTATGTTTTTGCCATCCAGCATCTGAAATGAAATTATACGACAAAATCGTTCCTAACTCTTTGGGAGAACAAAAGGAAATTCCATGA

mRNA sequence

ATGGAGAAGACATGTACTAAGATAGCTTGTCTACTTCTGATGTTCTTTATTGTCTCTGGATCATTATTCGTGTCAGATGCAAGAAATGTAGTAAATGTTCCATGCAATACTCCTAATGATTGTTTCGATCCAACTGCATGTGATTGCAAAATCAACCTATGTTTTTGCCATCCAGCATCTGAAATGAAATTATACGACAAAATCGTTCCTAACTCTTTGGGAGAACAAAAGGAAATTCCATGA

Coding sequence (CDS)

ATGGAGAAGACATGTACTAAGATAGCTTGTCTACTTCTGATGTTCTTTATTGTCTCTGGATCATTATTCGTGTCAGATGCAAGAAATGTAGTAAATGTTCCATGCAATACTCCTAATGATTGTTTCGATCCAACTGCATGTGATTGCAAAATCAACCTATGTTTTTGCCATCCAGCATCTGAAATGAAATTATACGACAAAATCGTTCCTAACTCTTTGGGAGAACAAAAGGAAATTCCATGA

Protein sequence

MEKTCTKIACLLLMFFIVSGSLFVSDARNVVNVPCNTPNDCFDPTACDCKINLCFCHPASEMKLYDKIVPNSLGEQKEIP
Homology
BLAST of Tan0022099 vs. NCBI nr
Match: KGN61957.1 (hypothetical protein Csa_006779 [Cucumis sativus])

HSP 1 Score: 91.7 bits (226), Expect = 3.2e-15
Identity = 45/79 (56.96%), Postives = 51/79 (64.56%), Query Frame = 0

Query: 1  MEKTCTKIACLLLMFFIVSGSLFVSDARNVVNVPCNTPNDCFDPTACDCKINLCFCHP-A 60
          M K  TK A   LM FI+S  LFVSDARNVVN+PC +  DC DP  CDCK+NLCFCHP  
Sbjct: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 SEMKLYDKIVPNSLGEQKE 79
           E K   K  P SL E ++
Sbjct: 61 LEKKFLHKAFPESLREDRK 79

BLAST of Tan0022099 vs. NCBI nr
Match: KAE8651915.1 (hypothetical protein Csa_006059 [Cucumis sativus])

HSP 1 Score: 90.9 bits (224), Expect = 5.4e-15
Identity = 45/78 (57.69%), Postives = 55/78 (70.51%), Query Frame = 0

Query: 1  MEKTCTKIACLLLMFFIVSGSLFVSDARNVVNVPCNTPNDCFDPTACDCKINLCFCHP-A 60
          M K+ TK+A LLLMFFI+S  +FV++ARNVVN+PCN+  DC DP  CDCK+NLCFCHP  
Sbjct: 1  MVKSSTKLALLLLMFFIIS-EMFVANARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 SEMKLYDKIVPNSLGEQK 78
           E K      P  L E+K
Sbjct: 61 LEKKFLHNAFPEHLREEK 77

BLAST of Tan0022099 vs. NCBI nr
Match: EXB53848.1 (hypothetical protein L484_006768 [Morus notabilis])

HSP 1 Score: 65.5 bits (158), Expect = 2.4e-07
Identity = 37/83 (44.58%), Postives = 52/83 (62.65%), Query Frame = 0

Query: 1  MEKTCTKIACLLLMFFIVSGSLFV-SDARNVVNVPCNTPNDCFDPTACDCK-INLCFCHP 60
          MEK  +++A L++MF +  GS  +  +ARNVVN+PCNT  DCFDP  C C  + LC CH 
Sbjct: 1  MEKV-SRMAILVVMFLLALGSHELGGEARNVVNIPCNTVGDCFDPNKCICSYLKLCMCH- 60

Query: 61 ASEMKL-YDKIVPNSLGEQKEIP 81
            E+K   +++    LG  KE+P
Sbjct: 61 -QELKFGVEELATTYLGAPKEMP 80

BLAST of Tan0022099 vs. NCBI nr
Match: OMO57769.1 (ATP-binding/protein serine/threonine kinase [Corchorus olitorius])

HSP 1 Score: 62.4 bits (150), Expect = 2.1e-06
Identity = 31/61 (50.82%), Postives = 40/61 (65.57%), Query Frame = 0

Query: 1  MEK-TCTKIACLLLMFFIVSGSLFVSDARNVVNVPCNTPNDCFDPTACDCKINLCFCHPA 60
          MEK T  K+  L  +    +GS    +ARN +N+PCNT  DC DP  C+C+INLCFCHPA
Sbjct: 1  MEKTTLMKMIFLAALLINFAGSQVGVEARN-INIPCNTIKDCPDPVKCECRINLCFCHPA 60

BLAST of Tan0022099 vs. NCBI nr
Match: EOY32074.1 (Uncharacterized protein TCM_039540 [Theobroma cacao])

HSP 1 Score: 61.2 bits (147), Expect = 4.6e-06
Identity = 29/59 (49.15%), Postives = 35/59 (59.32%), Query Frame = 0

Query: 1  MEKTCTKIACLLLMFFIVSGSLFVSDARNVVNVPCNTPNDCFDPTACDCKINLCFCHPA 60
          MEK   K+  L  +     G     +ARN +N PCNT  DC DP  C+C+INLCFCHPA
Sbjct: 1  MEKFSFKLIFLAALLVFALGLQVGVEARN-INTPCNTVKDCADPIKCECRINLCFCHPA 58

BLAST of Tan0022099 vs. ExPASy TrEMBL
Match: A0A0A0LJR0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285280 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.5e-15
Identity = 46/78 (58.97%), Postives = 54/78 (69.23%), Query Frame = 0

Query: 1  MEKTCTKIACLLLMFFIVSGSLFVSDARNVVNVPCNTPNDCFDPTACDCKINLCFCHP-A 60
          M K+ TK+A LLLMFFI+S   FV+DARNVVN+PCN+  DC DP  CDCK+NLCFCHP  
Sbjct: 1  MVKSSTKLALLLLMFFIIS-ETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 SEMKLYDKIVPNSLGEQK 78
           E K      P  L E+K
Sbjct: 61 LEKKFLHNAFPEHLREEK 77

BLAST of Tan0022099 vs. ExPASy TrEMBL
Match: A0A0A0LMG3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G276990 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.5e-15
Identity = 45/79 (56.96%), Postives = 51/79 (64.56%), Query Frame = 0

Query: 1  MEKTCTKIACLLLMFFIVSGSLFVSDARNVVNVPCNTPNDCFDPTACDCKINLCFCHP-A 60
          M K  TK A   LM FI+S  LFVSDARNVVN+PC +  DC DP  CDCK+NLCFCHP  
Sbjct: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 SEMKLYDKIVPNSLGEQKE 79
           E K   K  P SL E ++
Sbjct: 61 LEKKFLHKAFPESLREDRK 79

BLAST of Tan0022099 vs. ExPASy TrEMBL
Match: W9QTJ2 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006768 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.2e-07
Identity = 37/83 (44.58%), Postives = 52/83 (62.65%), Query Frame = 0

Query: 1  MEKTCTKIACLLLMFFIVSGSLFV-SDARNVVNVPCNTPNDCFDPTACDCK-INLCFCHP 60
          MEK  +++A L++MF +  GS  +  +ARNVVN+PCNT  DCFDP  C C  + LC CH 
Sbjct: 1  MEKV-SRMAILVVMFLLALGSHELGGEARNVVNIPCNTVGDCFDPNKCICSYLKLCMCH- 60

Query: 61 ASEMKL-YDKIVPNSLGEQKEIP 81
            E+K   +++    LG  KE+P
Sbjct: 61 -QELKFGVEELATTYLGAPKEMP 80

BLAST of Tan0022099 vs. ExPASy TrEMBL
Match: A0A2N9FRQ0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17804 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.5e-07
Identity = 32/73 (43.84%), Postives = 41/73 (56.16%), Query Frame = 0

Query: 1  MEKTCTKIACLLLMFFIVSGSLFVSDARNVVNVPCNTPNDCFDPTACDCKINLCFCHPAS 60
          MEK+  K+A ++++  I S   F  DARNVV +PC T NDC D   CDC  N C C P  
Sbjct: 1  MEKSSLKLALIVVLLLIASSFQFRVDARNVVVIPCETYNDCRDSAKCDCVHNHCRC-PGE 60

Query: 61 EMKLYDKIVPNSL 74
          E   + K + N L
Sbjct: 61 EQDFFTKAITNHL 72

BLAST of Tan0022099 vs. ExPASy TrEMBL
Match: A0A1R3GI95 (ATP-binding/protein serine/threonine kinase OS=Corchorus olitorius OX=93759 GN=COLO4_35133 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-06
Identity = 31/61 (50.82%), Postives = 40/61 (65.57%), Query Frame = 0

Query: 1  MEK-TCTKIACLLLMFFIVSGSLFVSDARNVVNVPCNTPNDCFDPTACDCKINLCFCHPA 60
          MEK T  K+  L  +    +GS    +ARN +N+PCNT  DC DP  C+C+INLCFCHPA
Sbjct: 1  MEKTTLMKMIFLAALLINFAGSQVGVEARN-INIPCNTIKDCPDPVKCECRINLCFCHPA 60

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KGN61957.13.2e-1556.96hypothetical protein Csa_006779 [Cucumis sativus][more]
KAE8651915.15.4e-1557.69hypothetical protein Csa_006059 [Cucumis sativus][more]
EXB53848.12.4e-0744.58hypothetical protein L484_006768 [Morus notabilis][more]
OMO57769.12.1e-0650.82ATP-binding/protein serine/threonine kinase [Corchorus olitorius][more]
EOY32074.14.6e-0649.15Uncharacterized protein TCM_039540 [Theobroma cacao][more]
Match NameE-valueIdentityDescription
A0A0A0LJR01.5e-1558.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285280 PE=4 SV=1[more]
A0A0A0LMG31.5e-1556.96Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G276990 PE=4 SV=1[more]
W9QTJ21.2e-0744.58Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006768 PE=4 SV=1[more]
A0A2N9FRQ04.5e-0743.84Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17804 PE=4 SV=1[more]
A0A1R3GI951.0e-0650.82ATP-binding/protein serine/threonine kinase OS=Corchorus olitorius OX=93759 GN=C... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0022099.1Tan0022099.1mRNA